Pay0000350 (gene) Melon (Payzawat) v1

Overview


Name	Pay0000350
Type	gene
Organism	Cucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	Reverse transcriptase
Location	chr01: 23337286 .. 23338161 (-)
RNA-Seq Expression	Pay0000350
Synteny	Pay0000350

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTATGGGATTGAACGATTGAAGAAATTAGGAGCCACAGTGTTTGAGGGTTCCACGGATCTAGCTGACGCTGAGGTCTGGTTAAATATGCTGGAGAAATGCTTCGACGTAATGAGTTGTCCTCAGGAGCGAAAAGTCAGATTAGCCACATTTCTGTTATAGAAAGAGGCCGAGGGATGGTGGAAATCCATTATAGCCGGGCGCAATGATGCACGTACGTTAGATTGGCAGACGTTCAGAGGCATATTTGAGGAAAAGTATTATCCCACCACATATTGTGAGGTAAAGAGAGATGAGTTTCTGGAGCTGAAACAAGGGTCACTTTGAGTAGCCGAGTACGAGAGAAAGTATACCGAGCTTTCACGATATGCTGAAATGATTGTGGCATCTGAGAGTGACAGGTGTCGCAGGTTTGAGAGAGGGCTACGTTTTGAGGTACGTACCCCAGTGACCGCTATTGCCAAGTTGACGAATTTTTCTCAGCTAGTAGAGACTGCTTTACGTGTGAAGCAGAGTATTGTAGAGGAAAAGTCGGCAATGGAGCTTAGTCAAGGAGTTTCAACAACTAGTGGTATTCGAGGTCGAGAGCAACGGAGGTTCACACCTGGAGTGAATGTTTCAGGTTGTCAAGACTTCAAGCATCGATTGGGTGGCAAACCATTGAGGCAAATGAGTTCAGGTAGTGCTTATTAGAGGCAGAGTTAGAGAGTTTCCAGTCAGTCTGCGAACTCAGTAGCAAGATCGCGGACGGGTCAGGAGTCTGTTGCTAGTGAATCCAGGAGAACCCCATGTGTAAGTTGTGGTAAGAGTCATCGGGGTCAGTGTCTTATTGGCGCCGGTGTGTGTTACCAGTGTGGACAAACAAGACATTTCTAA

mRNA sequence

ATGTATGGGATTGAACGATTGAAGAAATTAGGAGCCACAGTGTTTGAGGGTTCCACGGATCTAGCTGACGCTGAGGTCTGGTTAAATATGCTGGAGAAATGCTTCGACGTAATGAGTTGTCCTCAGGAGCGAAAAGCCGAGGGATGGTGGAAATCCATTATAGCCGGGCGCAATGATGCACGTACGTTAGATTGGCAGACGTTCAGAGGCATATTTGAGGAAAAGTATTATCCCACCACATATTGTGAGGTAAAGAGAGATGAAAAGTATACCGAGCTTTCACGATATGCTGAAATGATTGTGGCATCTGAGAGTGACAGGTGTCGCAGGTTTGAGAGAGGGCTACGTTTTGAGGTACGTACCCCAGTGACCGCTATTGCCAAGTTGACGAATTTTTCTCAGCTAGTAGAGACTGCTTTACGTGTGAAGCAGAGTATTGTAGAGGAAAAGTCGGCAATGGAGCTTAGTCAAGGAGTTTCAACAACTAGTGGTATTCGAGGTCGAGAGCAACGGAGGTTCACACCTGGAGTGAATGTTTCAGGTTGTCAAGACTTCAAGCATCGATTGGGTGGCAAACCATTGAGGCAAATGAGTTCAGTTTCCAGTCAGTCTGCGAACTCAGTAGCAAGATCGCGGACGGGTCAGGAGTCTGTTGCTAGTGAATCCAGGAGAACCCCATGTGTAAGTTGTGGTAAGAGTCATCGGGGTCAGTGTCTTATTGGCGCCGGTGTGTGTTACCAGTGTGGACAAACAAGACATTTCTAA

Coding sequence (CDS)

ATGTATGGGATTGAACGATTGAAGAAATTAGGAGCCACAGTGTTTGAGGGTTCCACGGATCTAGCTGACGCTGAGGTCTGGTTAAATATGCTGGAGAAATGCTTCGACGTAATGAGTTGTCCTCAGGAGCGAAAAGCCGAGGGATGGTGGAAATCCATTATAGCCGGGCGCAATGATGCACGTACGTTAGATTGGCAGACGTTCAGAGGCATATTTGAGGAAAAGTATTATCCCACCACATATTGTGAGGTAAAGAGAGATGAAAAGTATACCGAGCTTTCACGATATGCTGAAATGATTGTGGCATCTGAGAGTGACAGGTGTCGCAGGTTTGAGAGAGGGCTACGTTTTGAGGTACGTACCCCAGTGACCGCTATTGCCAAGTTGACGAATTTTTCTCAGCTAGTAGAGACTGCTTTACGTGTGAAGCAGAGTATTGTAGAGGAAAAGTCGGCAATGGAGCTTAGTCAAGGAGTTTCAACAACTAGTGGTATTCGAGGTCGAGAGCAACGGAGGTTCACACCTGGAGTGAATGTTTCAGGTTGTCAAGACTTCAAGCATCGATTGGGTGGCAAACCATTGAGGCAAATGAGTTCAGTTTCCAGTCAGTCTGCGAACTCAGTAGCAAGATCGCGGACGGGTCAGGAGTCTGTTGCTAGTGAATCCAGGAGAACCCCATGTGTAAGTTGTGGTAAGAGTCATCGGGGTCAGTGTCTTATTGGCGCCGGTGTGTGTTACCAGTGTGGACAAACAAGACATTTCTAA

Protein sequence

MYGIERLKKLGATVFEGSTDLADAEVWLNMLEKCFDVMSCPQERKAEGWWKSIIAGRNDARTLDWQTFRGIFEEKYYPTTYCEVKRDEKYTELSRYAEMIVASESDRCRRFERGLRFEVRTPVTAIAKLTNFSQLVETALRVKQSIVEEKSAMELSQGVSTTSGIRGREQRRFTPGVNVSGCQDFKHRLGGKPLRQMSSVSSQSANSVARSRTGQESVASESRRTPCVSCGKSHRGQCLIGAGVCYQCGQTRHF

Homology

[Close]

BLAST of Pay0000350 vs. ExPASy TrEMBL
Match: A0A5D3BTP3 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold374G00020 PE=4 SV=1)

HSP 1 Score: 449.5 bits (1155), Expect = 9.2e-123
Identity = 236/291 (81.10%), Postives = 243/291 (83.51%), Query Frame = 0


Query: 1   MYGIERLKKLGATVFEGSTDLADAEVWLNMLEKCFDVMSCPQERK-----------AEGW 60
           MYGIERLKKLGATVFEGSTD ADAEVWLNMLEKCFDVMSCPQERK           AEGW
Sbjct: 275 MYGIERLKKLGATVFEGSTDPADAEVWLNMLEKCFDVMSCPQERKVKLATFLLQKEAEGW 334

Query: 61  WKSIIAGRNDARTLDWQTFRGIFEEKYYPTTYCEVKRDE----------------KYTEL 120
           WKSIIA RNDARTLDWQTFRGIFEEKYYPTTYCE KRDE                KYTEL
Sbjct: 335 WKSIIARRNDARTLDWQTFRGIFEEKYYPTTYCEAKRDEFLELKQWSLSVAKYERKYTEL 394

Query: 121 SRYAEMIVASESDRCRRFERGLRFEVRTPVTAIAKLTNFSQLVETALRVKQSIVEEKSAM 180
           SRYAEMIVASESDRC RFERGLRFE+RTPVTAIAK  NFSQLVETALRVKQSIVEEKSAM
Sbjct: 395 SRYAEMIVASESDRCHRFERGLRFEIRTPVTAIAKWMNFSQLVETALRVKQSIVEEKSAM 454

Query: 181 ELSQGVSTTSGIRGREQRRFTPGVNVSGCQDFKHRLGGKPLRQMSS----------VSSQ 240
           ELS+GVSTTSGIRGREQRRFTPGVNVSGCQDFK R GGKPLRQMSS           SSQ
Sbjct: 455 ELSRGVSTTSGIRGREQRRFTPGVNVSGCQDFKRRSGGKPLRQMSSGSAYQRQSRRASSQ 514

Query: 241 SANSVARSRTGQESVASESRRTPCVSCGKSHRGQCLIGAGVCYQCGQTRHF 255
            ANSVARSRTGQESVASES+RTPCVSCGKSH+G+C+IGAGVCYQCG+T HF
Sbjct: 515 PANSVARSRTGQESVASESKRTPCVSCGKSHQGRCVIGAGVCYQCGKTGHF 565

[Close]

BLAST of Pay0000350 vs. ExPASy TrEMBL
Match: A0A5A7T7M6 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold277G002250 PE=4 SV=1)

HSP 1 Score: 449.5 bits (1155), Expect = 9.2e-123
Identity = 236/291 (81.10%), Postives = 243/291 (83.51%), Query Frame = 0


Query: 1   MYGIERLKKLGATVFEGSTDLADAEVWLNMLEKCFDVMSCPQERK-----------AEGW 60
           MYGIERLKKLGATVFEGSTD ADAEVWLNMLEKCFDVMSCPQERK           AEGW
Sbjct: 275 MYGIERLKKLGATVFEGSTDPADAEVWLNMLEKCFDVMSCPQERKVKLATFLLLKEAEGW 334

Query: 61  WKSIIAGRNDARTLDWQTFRGIFEEKYYPTTYCEVKRDE----------------KYTEL 120
           WKSIIA RNDARTLDWQTFRGIFEEKYYPTTYCE KRDE                KYTEL
Sbjct: 335 WKSIIARRNDARTLDWQTFRGIFEEKYYPTTYCEAKRDEFLELKQWSLSVAKYERKYTEL 394

Query: 121 SRYAEMIVASESDRCRRFERGLRFEVRTPVTAIAKLTNFSQLVETALRVKQSIVEEKSAM 180
           SRYAEMIVASESDRC RFERGLRFE+RTPVTAIAK  NFSQLVETALRVKQSIVEEKSAM
Sbjct: 395 SRYAEMIVASESDRCHRFERGLRFEIRTPVTAIAKWMNFSQLVETALRVKQSIVEEKSAM 454

Query: 181 ELSQGVSTTSGIRGREQRRFTPGVNVSGCQDFKHRLGGKPLRQMSS----------VSSQ 240
           ELS+GVSTTSGIRGREQRRFTPGVNVSGCQDFK R GGKPLRQMSS           SSQ
Sbjct: 455 ELSRGVSTTSGIRGREQRRFTPGVNVSGCQDFKRRSGGKPLRQMSSGSAYQRQSRRASSQ 514

Query: 241 SANSVARSRTGQESVASESRRTPCVSCGKSHRGQCLIGAGVCYQCGQTRHF 255
            ANSVARSRTGQESVASES+RTPCVSCGKSH+G+C+IGAGVCYQCG+T HF
Sbjct: 515 PANSVARSRTGQESVASESKRTPCVSCGKSHQGRCVIGAGVCYQCGKTGHF 565

[Close]

BLAST of Pay0000350 vs. ExPASy TrEMBL
Match: A0A1S4E521 (uncharacterized protein LOC103502804 OS=Cucumis melo OX=3656 GN=LOC103502804 PE=4 SV=1)

HSP 1 Score: 407.1 bits (1045), Expect = 5.2e-110
Identity = 220/286 (76.92%), Postives = 230/286 (80.42%), Query Frame = 0


Query: 1   MYGIERLKKLGATVFEGSTDLADAEVWLNMLEKCFDVMSCPQERK-----------AEGW 60
           MYGIERLKKLG T+FEGST+ AD EVWLNMLEKCFDVMS PQ+RK           AEGW
Sbjct: 1   MYGIERLKKLGPTLFEGSTNPADVEVWLNMLEKCFDVMSFPQDRKVKLATFLLQKEAEGW 60

Query: 61  WKSIIAGRNDARTLDWQTFRGIFEEKYYPTTYCEVKRDE----------------KYTEL 120
            KSIIA RNDARTLDWQTFRGIFE  YYPTTYCE KRDE                KYTEL
Sbjct: 61  LKSIIAKRNDARTLDWQTFRGIFEVYYYPTTYCEAKRDEFLELKQGSLSVAEYERKYTEL 120

Query: 121 SRYAEMIVASESDRCRRFERGLRFEVRTPVTAIAKLTNFSQLVETALRVKQSIVEEKSAM 180
           SRYAEMIVASESDRCR FERGLRFE+RT VT IAK T+FSQLVETALRV+QSIV+E SAM
Sbjct: 121 SRYAEMIVASESDRCRSFERGLRFEIRTLVTVIAKWTDFSQLVETALRVEQSIVKENSAM 180

Query: 181 ELSQGVSTTSGIRGREQRRFTPGVNVSGCQDFKHRLGGKPLRQMSS----------VSSQ 240
           ELS+GVSTTSGIRGREQRRFTPGV+VSGCQDFK R GGKPLRQMSS           SSQ
Sbjct: 181 ELSRGVSTTSGIRGREQRRFTPGVSVSGCQDFKRRSGGKPLRQMSSGSAYQRQHQRASSQ 240

Query: 241 SANSVARSRTGQESVASESRRTPCVSCGKSHRGQCLIGAGVCYQCG 250
           S NSVARSRTGQESVASESRRTP VSCGKSH+GQCLIGAGVCYQCG
Sbjct: 241 STNSVARSRTGQESVASESRRTPRVSCGKSHQGQCLIGAGVCYQCG 286

[Close]

BLAST of Pay0000350 vs. ExPASy TrEMBL
Match: A0A5A7U2V7 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold374G00630 PE=4 SV=1)

HSP 1 Score: 388.3 bits (996), Expect = 2.5e-104
Identity = 199/290 (68.62%), Postives = 223/290 (76.90%), Query Frame = 0


Query: 2   YGIERLKKLGATVFEGSTDLADAEVWLNMLEKCFDVMSCPQERK-----------AEGWW 61
           YGIERLKKLGATVFEGSTD ADAE WLNMLEKCFDVM+CP+ERK           AEGWW
Sbjct: 64  YGIERLKKLGATVFEGSTDPADAENWLNMLEKCFDVMNCPEERKVRLATFLLQKEAEGWW 123

Query: 62  KSIIAGRNDARTLDWQTFRGIFEEKYYPTTYCEVKRDE----------------KYTELS 121
           KSI+A R+DAR LDWQTFRGIFE+KYYP+TYCE KRDE                KYTELS
Sbjct: 124 KSILARRSDARALDWQTFRGIFEDKYYPSTYCEAKRDEFLGLKQGSLSVAEYERKYTELS 183

Query: 122 RYAEMIVASESDRCRRFERGLRFEVRTPVTAIAKLTNFSQLVETALRVKQSIVEEKSAME 181
           RYA++I+ASESDRCRRFERGLRFE+RTPVTAIAK TNFSQLVETALRV+QSI EEKSA+E
Sbjct: 184 RYADVIIASESDRCRRFERGLRFEIRTPVTAIAKWTNFSQLVETALRVEQSITEEKSAVE 243

Query: 182 LSQGVSTTSGIRGREQRRFTPGVNVSGCQDFKHRLGGKPLRQMS----------SVSSQS 241
           LS+G ST SG RGREQRRFTPG+N+S  QDFK+R GG+  R +S           + SQ 
Sbjct: 244 LSRGTSTASGFRGREQRRFTPGINISSRQDFKNRSGGQASRNVSYGSVFQRQSQRIPSQP 303

Query: 242 ANSVARSRTGQESVASESRRTPCVSCGKSHRGQCLIGAGVCYQCGQTRHF 255
             S  RS+ GQES+AS  RR PC SCG++HRGQCL+GAGVCYQCGQ  HF
Sbjct: 304 IRSTVRSQPGQESIASTVRRIPCTSCGRNHRGQCLVGAGVCYQCGQPGHF 353

[Close]

BLAST of Pay0000350 vs. ExPASy TrEMBL
Match: A0A5D3BS67 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold509G00050 PE=4 SV=1)

HSP 1 Score: 388.3 bits (996), Expect = 2.5e-104
Identity = 199/290 (68.62%), Postives = 223/290 (76.90%), Query Frame = 0


Query: 2   YGIERLKKLGATVFEGSTDLADAEVWLNMLEKCFDVMSCPQERK-----------AEGWW 61
           YGIERLKKLGATVFEGSTD ADAE WLNMLEKCFDVM+CP+ERK           AEGWW
Sbjct: 102 YGIERLKKLGATVFEGSTDPADAENWLNMLEKCFDVMNCPEERKVRLATFLLQKEAEGWW 161

Query: 62  KSIIAGRNDARTLDWQTFRGIFEEKYYPTTYCEVKRDE----------------KYTELS 121
           KSI+A R+DAR LDWQTFRGIFE+KYYP+TYCE KRDE                KYTELS
Sbjct: 162 KSILARRSDARALDWQTFRGIFEDKYYPSTYCEAKRDEFLGLKQGSLSVAEYERKYTELS 221

Query: 122 RYAEMIVASESDRCRRFERGLRFEVRTPVTAIAKLTNFSQLVETALRVKQSIVEEKSAME 181
           RYA++I+ASESDRCRRFERGLRFE+RTPVTAIAK TNFSQLVETALRV+QSI EEKSA+E
Sbjct: 222 RYADVIIASESDRCRRFERGLRFEIRTPVTAIAKWTNFSQLVETALRVEQSITEEKSAVE 281

Query: 182 LSQGVSTTSGIRGREQRRFTPGVNVSGCQDFKHRLGGKPLRQMS----------SVSSQS 241
           LS+G ST SG RGREQRRFTPG+N+S  QDFK+R GG+  R +S           + SQ 
Sbjct: 282 LSRGTSTASGFRGREQRRFTPGINISSRQDFKNRSGGQASRNVSYGSVFQRQSQRIPSQP 341

Query: 242 ANSVARSRTGQESVASESRRTPCVSCGKSHRGQCLIGAGVCYQCGQTRHF 255
             S  RS+ GQES+AS  RR PC SCG++HRGQCL+GAGVCYQCGQ  HF
Sbjct: 342 IRSTVRSQPGQESIASTVRRIPCTSCGRNHRGQCLVGAGVCYQCGQPGHF 391

[Close]

BLAST of Pay0000350 vs. NCBI nr
Match: KAA0037581.1 (reverse transcriptase [Cucumis melo var. makuwa])

HSP 1 Score: 449.5 bits (1155), Expect = 1.9e-122
Identity = 236/291 (81.10%), Postives = 243/291 (83.51%), Query Frame = 0


Query: 1   MYGIERLKKLGATVFEGSTDLADAEVWLNMLEKCFDVMSCPQERK-----------AEGW 60
           MYGIERLKKLGATVFEGSTD ADAEVWLNMLEKCFDVMSCPQERK           AEGW
Sbjct: 275 MYGIERLKKLGATVFEGSTDPADAEVWLNMLEKCFDVMSCPQERKVKLATFLLLKEAEGW 334

Query: 61  WKSIIAGRNDARTLDWQTFRGIFEEKYYPTTYCEVKRDE----------------KYTEL 120
           WKSIIA RNDARTLDWQTFRGIFEEKYYPTTYCE KRDE                KYTEL
Sbjct: 335 WKSIIARRNDARTLDWQTFRGIFEEKYYPTTYCEAKRDEFLELKQWSLSVAKYERKYTEL 394

Query: 121 SRYAEMIVASESDRCRRFERGLRFEVRTPVTAIAKLTNFSQLVETALRVKQSIVEEKSAM 180
           SRYAEMIVASESDRC RFERGLRFE+RTPVTAIAK  NFSQLVETALRVKQSIVEEKSAM
Sbjct: 395 SRYAEMIVASESDRCHRFERGLRFEIRTPVTAIAKWMNFSQLVETALRVKQSIVEEKSAM 454

Query: 181 ELSQGVSTTSGIRGREQRRFTPGVNVSGCQDFKHRLGGKPLRQMSS----------VSSQ 240
           ELS+GVSTTSGIRGREQRRFTPGVNVSGCQDFK R GGKPLRQMSS           SSQ
Sbjct: 455 ELSRGVSTTSGIRGREQRRFTPGVNVSGCQDFKRRSGGKPLRQMSSGSAYQRQSRRASSQ 514

Query: 241 SANSVARSRTGQESVASESRRTPCVSCGKSHRGQCLIGAGVCYQCGQTRHF 255
            ANSVARSRTGQESVASES+RTPCVSCGKSH+G+C+IGAGVCYQCG+T HF
Sbjct: 515 PANSVARSRTGQESVASESKRTPCVSCGKSHQGRCVIGAGVCYQCGKTGHF 565

[Close]

BLAST of Pay0000350 vs. NCBI nr
Match: TYK03091.1 (reverse transcriptase [Cucumis melo var. makuwa])

HSP 1 Score: 449.5 bits (1155), Expect = 1.9e-122
Identity = 236/291 (81.10%), Postives = 243/291 (83.51%), Query Frame = 0


Query: 1   MYGIERLKKLGATVFEGSTDLADAEVWLNMLEKCFDVMSCPQERK-----------AEGW 60
           MYGIERLKKLGATVFEGSTD ADAEVWLNMLEKCFDVMSCPQERK           AEGW
Sbjct: 275 MYGIERLKKLGATVFEGSTDPADAEVWLNMLEKCFDVMSCPQERKVKLATFLLQKEAEGW 334

Query: 61  WKSIIAGRNDARTLDWQTFRGIFEEKYYPTTYCEVKRDE----------------KYTEL 120
           WKSIIA RNDARTLDWQTFRGIFEEKYYPTTYCE KRDE                KYTEL
Sbjct: 335 WKSIIARRNDARTLDWQTFRGIFEEKYYPTTYCEAKRDEFLELKQWSLSVAKYERKYTEL 394

Query: 121 SRYAEMIVASESDRCRRFERGLRFEVRTPVTAIAKLTNFSQLVETALRVKQSIVEEKSAM 180
           SRYAEMIVASESDRC RFERGLRFE+RTPVTAIAK  NFSQLVETALRVKQSIVEEKSAM
Sbjct: 395 SRYAEMIVASESDRCHRFERGLRFEIRTPVTAIAKWMNFSQLVETALRVKQSIVEEKSAM 454

Query: 181 ELSQGVSTTSGIRGREQRRFTPGVNVSGCQDFKHRLGGKPLRQMSS----------VSSQ 240
           ELS+GVSTTSGIRGREQRRFTPGVNVSGCQDFK R GGKPLRQMSS           SSQ
Sbjct: 455 ELSRGVSTTSGIRGREQRRFTPGVNVSGCQDFKRRSGGKPLRQMSSGSAYQRQSRRASSQ 514

Query: 241 SANSVARSRTGQESVASESRRTPCVSCGKSHRGQCLIGAGVCYQCGQTRHF 255
            ANSVARSRTGQESVASES+RTPCVSCGKSH+G+C+IGAGVCYQCG+T HF
Sbjct: 515 PANSVARSRTGQESVASESKRTPCVSCGKSHQGRCVIGAGVCYQCGKTGHF 565

[Close]

BLAST of Pay0000350 vs. NCBI nr
Match: XP_016903324.1 (PREDICTED: uncharacterized protein LOC103502804 [Cucumis melo])

HSP 1 Score: 407.1 bits (1045), Expect = 1.1e-109
Identity = 220/286 (76.92%), Postives = 230/286 (80.42%), Query Frame = 0


Query: 1   MYGIERLKKLGATVFEGSTDLADAEVWLNMLEKCFDVMSCPQERK-----------AEGW 60
           MYGIERLKKLG T+FEGST+ AD EVWLNMLEKCFDVMS PQ+RK           AEGW
Sbjct: 1   MYGIERLKKLGPTLFEGSTNPADVEVWLNMLEKCFDVMSFPQDRKVKLATFLLQKEAEGW 60

Query: 61  WKSIIAGRNDARTLDWQTFRGIFEEKYYPTTYCEVKRDE----------------KYTEL 120
            KSIIA RNDARTLDWQTFRGIFE  YYPTTYCE KRDE                KYTEL
Sbjct: 61  LKSIIAKRNDARTLDWQTFRGIFEVYYYPTTYCEAKRDEFLELKQGSLSVAEYERKYTEL 120

Query: 121 SRYAEMIVASESDRCRRFERGLRFEVRTPVTAIAKLTNFSQLVETALRVKQSIVEEKSAM 180
           SRYAEMIVASESDRCR FERGLRFE+RT VT IAK T+FSQLVETALRV+QSIV+E SAM
Sbjct: 121 SRYAEMIVASESDRCRSFERGLRFEIRTLVTVIAKWTDFSQLVETALRVEQSIVKENSAM 180

Query: 181 ELSQGVSTTSGIRGREQRRFTPGVNVSGCQDFKHRLGGKPLRQMSS----------VSSQ 240
           ELS+GVSTTSGIRGREQRRFTPGV+VSGCQDFK R GGKPLRQMSS           SSQ
Sbjct: 181 ELSRGVSTTSGIRGREQRRFTPGVSVSGCQDFKRRSGGKPLRQMSSGSAYQRQHQRASSQ 240

Query: 241 SANSVARSRTGQESVASESRRTPCVSCGKSHRGQCLIGAGVCYQCG 250
           S NSVARSRTGQESVASESRRTP VSCGKSH+GQCLIGAGVCYQCG
Sbjct: 241 STNSVARSRTGQESVASESRRTPRVSCGKSHQGQCLIGAGVCYQCG 286

[Close]

BLAST of Pay0000350 vs. NCBI nr
Match: KAA0066849.1 (DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa])

HSP 1 Score: 388.3 bits (996), Expect = 5.2e-104
Identity = 199/290 (68.62%), Postives = 223/290 (76.90%), Query Frame = 0


Query: 2   YGIERLKKLGATVFEGSTDLADAEVWLNMLEKCFDVMSCPQERK-----------AEGWW 61
           YGIERLKKLGATVFEGSTD ADAE WLNMLEKCFDVM+CP+ERK           AEGWW
Sbjct: 102 YGIERLKKLGATVFEGSTDPADAENWLNMLEKCFDVMNCPEERKVRLATFLLQKEAEGWW 161

Query: 62  KSIIAGRNDARTLDWQTFRGIFEEKYYPTTYCEVKRDE----------------KYTELS 121
           KSI+A R+DAR LDWQTFRGIFE+KYYP+TYCE KRDE                KYTELS
Sbjct: 162 KSILARRSDARALDWQTFRGIFEDKYYPSTYCEAKRDEFLGLKQGSLSVAEYERKYTELS 221

Query: 122 RYAEMIVASESDRCRRFERGLRFEVRTPVTAIAKLTNFSQLVETALRVKQSIVEEKSAME 181
           RYA++I+ASESDRCRRFERGLRFE+RTPVTAIAK TNFSQLVETALRV+QSI EEKSA+E
Sbjct: 222 RYADVIIASESDRCRRFERGLRFEIRTPVTAIAKWTNFSQLVETALRVEQSITEEKSAVE 281

Query: 182 LSQGVSTTSGIRGREQRRFTPGVNVSGCQDFKHRLGGKPLRQMS----------SVSSQS 241
           LS+G ST SG RGREQRRFTPG+N+S  QDFK+R GG+  R +S           + SQ 
Sbjct: 282 LSRGTSTASGFRGREQRRFTPGINISSRQDFKNRSGGQASRNVSYGSVFQRQSQRIPSQP 341

Query: 242 ANSVARSRTGQESVASESRRTPCVSCGKSHRGQCLIGAGVCYQCGQTRHF 255
             S  RS+ GQES+AS  RR PC SCG++HRGQCL+GAGVCYQCGQ  HF
Sbjct: 342 IRSTVRSQPGQESIASTVRRIPCTSCGRNHRGQCLVGAGVCYQCGQPGHF 391

[Close]

BLAST of Pay0000350 vs. NCBI nr
Match: KAA0035455.1 (DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa] >KAA0046782.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa] >TYK01987.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa] >TYK03719.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa] >TYK25877.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa])

HSP 1 Score: 388.3 bits (996), Expect = 5.2e-104
Identity = 199/290 (68.62%), Postives = 223/290 (76.90%), Query Frame = 0


Query: 2   YGIERLKKLGATVFEGSTDLADAEVWLNMLEKCFDVMSCPQERK-----------AEGWW 61
           YGIERLKKLGATVFEGSTD ADAE WLNMLEKCFDVM+CP+ERK           AEGWW
Sbjct: 102 YGIERLKKLGATVFEGSTDPADAENWLNMLEKCFDVMNCPEERKVRLATFLLQKEAEGWW 161

Query: 62  KSIIAGRNDARTLDWQTFRGIFEEKYYPTTYCEVKRDE----------------KYTELS 121
           KSI+A R+DAR LDWQTFRGIFE+KYYP+TYCE KRDE                KYTELS
Sbjct: 162 KSILARRSDARALDWQTFRGIFEDKYYPSTYCEAKRDEFLGLKQGSLSVAEYERKYTELS 221

Query: 122 RYAEMIVASESDRCRRFERGLRFEVRTPVTAIAKLTNFSQLVETALRVKQSIVEEKSAME 181
           RYA++I+ASESDRCRRFERGLRFE+RTPVTAIAK TNFSQLVETALRV+QSI EEKSA+E
Sbjct: 222 RYADVIIASESDRCRRFERGLRFEIRTPVTAIAKWTNFSQLVETALRVEQSITEEKSAVE 281

Query: 182 LSQGVSTTSGIRGREQRRFTPGVNVSGCQDFKHRLGGKPLRQMS----------SVSSQS 241
           LS+G ST SG RGREQRRFTPG+N+S  QDFK+R GG+  R +S           + SQ 
Sbjct: 282 LSRGTSTASGFRGREQRRFTPGINISSRQDFKNRSGGQASRNVSYGSVFQRQSQRIPSQP 341

Query: 242 ANSVARSRTGQESVASESRRTPCVSCGKSHRGQCLIGAGVCYQCGQTRHF 255
             S  RS+ GQES+AS  RR PC SCG++HRGQCL+GAGVCYQCGQ  HF
Sbjct: 342 IRSTVRSQPGQESIASTVRRIPCTSCGRNHRGQCLVGAGVCYQCGQPGHF 391

The following BLAST results are available for this feature:

BLAST of Pay0000350 vs.


Match Name	E-value	Identity	Description

BLAST of Pay0000350 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BTP3	9.2e-123	81.10	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold37...	[more]
A0A5A7T7M6	9.2e-123	81.10	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold27...	[more]
A0A1S4E521	5.2e-110	76.92	uncharacterized protein LOC103502804 OS=Cucumis melo OX=3656 GN=LOC103502804 PE=...	[more]
A0A5A7U2V7	2.5e-104	68.62	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold37...	[more]
A0A5D3BS67	2.5e-104	68.62	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold50...	[more]

BLAST of Pay0000350 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0037581.1	1.9e-122	81.10	reverse transcriptase [Cucumis melo var. makuwa]	[more]
TYK03091.1	1.9e-122	81.10	reverse transcriptase [Cucumis melo var. makuwa]	[more]
XP_016903324.1	1.1e-109	76.92	PREDICTED: uncharacterized protein LOC103502804 [Cucumis melo]	[more]
KAA0066849.1	5.2e-104	68.62	DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]	[more]
KAA0035455.1	5.2e-104	68.62	DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa] >KAA0046782.1...	[more]

BLAST of Pay0000350 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 195..218
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 193..218
None	No IPR available	PANTHER	PTHR34482:SF4	POLYMERASES SUPERFAMILY PROTEIN, PUTATIVE ISOFORM 1-RELATED	coord: 25..251
None	No IPR available	PANTHER	PTHR34482	DNA DAMAGE-INDUCIBLE PROTEIN 1-LIKE	coord: 25..251

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Pay0000350.1	Pay0000350.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
biological_process	GO:0090305	nucleic acid phosphodiester bond hydrolysis
biological_process	GO:0006508	proteolysis
biological_process	GO:0006278	RNA-dependent DNA biosynthetic process
molecular_function	GO:0004190	aspartic-type endopeptidase activity
molecular_function	GO:0004519	endonuclease activity
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0003964	RNA-directed DNA polymerase activity
molecular_function	GO:0008270	zinc ion binding