PI0029211 (gene) Melon (PI 482460) v1

Overview
NamePI0029211
Typegene
OrganismCucumis metuliferus (Melon (PI 482460) v1)
DescriptionUnknown protein
Locationchr07: 20518927 .. 20522400 (-)
RNA-Seq ExpressionPI0029211
SyntenyPI0029211
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTATCGGAACATATGGTATAGAGAGCTTTGGTGTGTTAGATAATATGATATTAAATTTACGTAGGTCTTTCGATGATTAAGATGTTTATCATTTAATACGCTCCTACTAGTTTTTTTAATAAATGTTATAAGAAAAGTAGAAGAAGACAAAGAAGAAGGAGGATAAAAAATAAAGAAAAATAAATGTGTACATTTACGAGAGTAACTATTAATATTGATTCAAATGTAACAAAATAAATCAAAATATTTAAAAAAATATAGCGAAATTTCAGATTCAATTATATTGAATTAAATTGTTGAGTTTAAAAATATCTTTCTAAATATACTTCAAACTTATCCACAATCATAGAAAAACAGTTACAATCTTTTGTTTAGTTTGTTTGTTTCATTGTTTTTTTTTTCTATATAAGACAATGACCAATTTGTTTGTATTTTTAAATGATTTATTATATGCGCGGGATTTAAATACTACTTTTATTCATGTATTTTAAAACAGTTATTTTGGTCCCTATATTTTTAAAAAAATTTATTTTAGTTATTTTACTATTAAATTTATTTTATTAAGAGCGAACTTTTGGAATATAAAAGTAAAGTAAAAAATCAAGATAGTATAAAGATAAATCAAGATAATATGAGATTACGTAAAATAAGATGAGATAAGATTTAATTTAGGGTGTTTAGGATTAGGAAAGCCATATCAAATCTCACATCTTAATTAGTAGGAAATCAAATCCCCTATAAATACTTCATTTTGAAGTCATATGAGTTAACTAAGACTTCCGACTTCTTTTGACTTAGGTAACTAAGATTTATCATCTCTTATCTAAAATTTAAAAAAAAAGAAAAAGAAGAGTAATTTCAAAAAATATTTATTTATTCATTTATTGTCTATGTTTTATCCATCGTCAAAATTTGAAAATTAAAAAAAATAGTTTTCAAAAAGTTTGTTTTTGTTTTTTAAACGTGACTTAAAAAAAATAGATTTAATTTTAAAACATAAAATAATTATCAAATAGGAATTAAATAAAAAAGTATATGAAATATTTCAAGGGTCGAATGATCAAAATAAACCAAAACAAAAAAGTAAAGAAAGGAACCTACTATTTAAAGCTTATAAAATAAAATAATAAGAGGGATTTGTCTGGAATCTTCGTATCGTAGTGGTTAACGCTAACGAGCGCAGCGTAGCGTGAGAAAAGAAGAGACTAAGTTATTGTTTGTGCGTTGCATTGGGCCCAATTACCTGACCCTAATCCTTCCCTCTCTCTTTCTTCCATTCCTAACAGAAATTTCTTTTCGTCTTTCCATTGCCTTTCTCTCTATTCTCCTTCTTCTCTTCTTCCTCATTTTCATTATCATTCGCATTTTCTTTCTTTCTACTACTTTTTGTTCCTCCTTTAATCCTTCTCCGCAGTTCTTATTGCTTGCTGATTCTTCTCCGCCGCGTCGCGACGTTTTCCGCCGATTTTTCGGTGAGTTTCTATGGTTTTTGTGATATCTTTGGTGATTTTTTGCTTATCGATTTGTTTTGGTTGCTTTTCTGATCAAACGCGCATTTCTGTGGTGTTTTAAATTCTATTTTATTCTTTATATGAGTTTTTTTGTGCTTAATCCTGTTTTTTTTTTTGTTTTGTTTTGTTGATTTTTTTGGTTTATGTTCTTGCTTGCTTTAGAAATTGATGTCGGAATTCCTTTTTGAAACTTACTGATTGCCGTTGATGTTCTTGGACGATCTTCTTCGTGTTTCGATTTTCGTGATGAGTGTGAATTTGCATTCTACTTGTTTATTTCTTTCGTTTTTCAGTGTGATTGACTTCTTTTTGGCTGCATTAGAAATTGATGACGGATTGACTTACCTTTGTGAAACTTGCGGATTGCTGTTGGTGTATTTTGACGATCTTCTTCGAGTTTCGATTTTCGCGATTAGTGTAAATTTGAATTCTATTTGTTTGTTTGTTTCTTTTTCAGTTTTCAAAATTTATTAACGTATGTTTTCAATGTGATTGATTGCTTTATAAGCGTTTAAATTAGACTGCCATTGTGACACTTGCTGGTCACTGGTCCTTGGAAGTTGGACGTTCTTCTTTGTATTTCAGTTTTGTGATGTGTGTAAGTGTGAATTTTACATACGGTGGGACTCTGAAGCTAATTCACAATGTCTGTGTTTGGTAGTTTTGATCTTTCAGTTCTGAGGATGTTATGTATTATCTATCTGTCGTGTAGAACTTCATTGAACTGCAAGCTTATGTTGGTTTAGGAGATGCTCTGTATGATCAGCCTGTGGTCCAAAGATTTTAGAAGCTTGGTTGTACTTGTTGTACATTTAGAGCTTTTGAACAAAAAGATTGTGATGTGTTATTAGAAAATTTGCAACATGCAATGTTGTTTTATTGTGTCACGATCAGCTTATCCTAGGTTTTTAATCTACTTAGCATGTTGCATGCATTTGGAAGTTGGATGGCTAAGCATTAGACCTCATAGTTCTAACTTTTAAGTATATGGCCAATTTTTTACCAGTAAAAATTGGAAATAAAATCTTCACATGTTCCTTTGCTCCAATTTTGATTGAGCTGATTAGCCAAAAGGAACCACCTAAGGATCGAGAGCCGAGGGTGCTCCCTCCTAATGAAATTGTATGACAAAAAGGTTTTCCAATTTCTAATAATAATGGAAAGATTTTATTACGAAAGATGTCTTTGTGATTTGAAATCCACCAAGAGGCCATATGTTGTATACTATACACGAGAAGAAGCCTCAGTATTCCACGAATGAAATTTCTGCTTTGATCTTGCCAGGACACCAGTTCCCGTGTCATCATGTTTGGTTCTTTGTATTCTTTCTTTTGGGGGTTTAAGCAATCTTTCTACATGGGGAATATTTGAGCATGAATACTAATATTACTTTGTGACTACTTAATTTATCTTCTGACTGCTTCTTTTGCACATTGGCGCATTATAGATTAAGAAGAATGTCAAGTGTTATCCCTCATTGAATAACATAAAATTGCAATGAGAGATGTGACATTAAACCAAGTATAATGCTATGGTTTGTACAAAGTTCTATCAGTTTAAGGATTCCACCTAGATGAGTTTTGGATGGGAGAATCGCTCCATTGTTCACTTATAGGAAAGAGGGAAACTACTAATTAATTACAAAAGTAAAGCTTCTTAAGGAAGCCTTAAATTTGATAAACCTATAGTACATCTACAGTCCTAATTCTTTAACTAAGATTCTGAGAGCACTCTGCCACAACTTTCTTGCCATCTGTTGGATGAAACCTTTTGATTTGTAGTTCCTTTACTTTGCTTTTTAGTCTCTCCTAATGTTTTGGGTTGACCTTTATAGAGTGGTGAATGAGAATGATGCTCTTGTTTTAACTCTGCCCATGATGTTTAGTTTTCTTCATTAGTTGGTTAAGCTGACTTACCTTTTACTTTGAAGACAGGTGTAAATAGGCAGAGAAGAAGTTAG

mRNA sequence

ATGGTATCGGAACATATGCGTAGCGTGAGAAAAGAAGAGACTAAGTTATTGTTTGTGCGTTGCATTGGGCCCAATTACCTGACCCTAATCCTTCCCTCTCTCTTTCTTCCATTCCTAACAGAAATTTCTTTTCGTCTTTCCATTGCCTTTCTCTCTATTCTCCTTCTTCTCTTCTTCCTCATTTTCATTATCATTCGCATTTTCTTTCTTTCTACTACTTTTTGTTCCTCCTTTAATCCTTCTCCGCAGTTCTTATTGCTTGCTGATTCTTCTCCGCCGCGTCGCGACGTTTTCCGCCGATTTTTCGGTGTAAATAGGCAGAGAAGAAGTTAG

Coding sequence (CDS)

ATGGTATCGGAACATATGCGTAGCGTGAGAAAAGAAGAGACTAAGTTATTGTTTGTGCGTTGCATTGGGCCCAATTACCTGACCCTAATCCTTCCCTCTCTCTTTCTTCCATTCCTAACAGAAATTTCTTTTCGTCTTTCCATTGCCTTTCTCTCTATTCTCCTTCTTCTCTTCTTCCTCATTTTCATTATCATTCGCATTTTCTTTCTTTCTACTACTTTTTGTTCCTCCTTTAATCCTTCTCCGCAGTTCTTATTGCTTGCTGATTCTTCTCCGCCGCGTCGCGACGTTTTCCGCCGATTTTTCGGTGTAAATAGGCAGAGAAGAAGTTAG

Protein sequence

MVSEHMRSVRKEETKLLFVRCIGPNYLTLILPSLFLPFLTEISFRLSIAFLSILLLLFFLIFIIIRIFFLSTTFCSSFNPSPQFLLLADSSPPRRDVFRRFFGVNRQRRS
Homology
[Close]
BLAST of PI0029211 vs. ExPASy TrEMBL
Match: A0A0A0KZ46 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G614190 PE=4 SV=1)

HSP 1 Score: 100.5 bits (249), Expect = 4.5e-18
Identity = 64/90 (71.11%), Postives = 65/90 (72.22%), Query Frame = 0 

Query: 21  CIGPNYLTLILPSLFLPFLTEISFRLSIAFLSILLLLFFLIFIIIRIFFLSTTFCSSFNP 80
           C GPNYLTLILPSLFLPFLTEISF LSIAF S         F      FLST+  SSFNP
Sbjct: 13  CFGPNYLTLILPSLFLPFLTEISFPLSIAFFSSSPFSLSFPFSA----FLSTSLSSSFNP 72

Query: 81  SPQFLLLADSSPPRRDVFRRFFGVNRQRRS 111
           SP FLLL DSSPPR  VFRRF GVNRQRRS
Sbjct: 73  SPLFLLLPDSSPPRLHVFRRFSGVNRQRRS 98

[Close]
BLAST of PI0029211 vs. NCBI nr
Match: KGN54945.1 (hypothetical protein Csa_012619 [Cucumis sativus])

HSP 1 Score: 100.5 bits (249), Expect = 9.4e-18
Identity = 64/90 (71.11%), Postives = 65/90 (72.22%), Query Frame = 0 

Query: 21  CIGPNYLTLILPSLFLPFLTEISFRLSIAFLSILLLLFFLIFIIIRIFFLSTTFCSSFNP 80
           C GPNYLTLILPSLFLPFLTEISF LSIAF S         F      FLST+  SSFNP
Sbjct: 13  CFGPNYLTLILPSLFLPFLTEISFPLSIAFFSSSPFSLSFPFSA----FLSTSLSSSFNP 72

Query: 81  SPQFLLLADSSPPRRDVFRRFFGVNRQRRS 111
           SP FLLL DSSPPR  VFRRF GVNRQRRS
Sbjct: 73  SPLFLLLPDSSPPRLHVFRRFSGVNRQRRS 98

The following BLAST results are available for this feature:
BLAST of PI0029211 vs.
Match NameE-valueIdentityDescription
BLAST of PI0029211 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KZ464.5e-1871.11Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G614190 PE=4 SV=1[more]
BLAST of PI0029211 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN54945.19.4e-1871.11hypothetical protein Csa_012619 [Cucumis sativus][more]
BLAST of PI0029211 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
PI0029211.1PI0029211.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016020 membrane