PI0029180 (gene) Melon (PI 482460) v1

Overview
NamePI0029180
Typegene
OrganismCucumis metuliferus (Melon (PI 482460) v1)
DescriptionUnknown protein
Locationchr04: 21257142 .. 21257713 (-)
RNA-Seq ExpressionPI0029180
SyntenyPI0029180
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AAAAAACCCATTTCTCTCTCTTTTCTTCATAATCTCTTCAAAATTCTGTGAGTGATTTTAAGGGTTTTTGAAAGATGAAATTTTTAGGGTTGAGTTTATGGAAATGGCAATTCATGAAGCTTGGAAATAGGATTGCAAATTCAGGGTCTTCTTCTTCTTCTTCTATTCCTTATGTGGTTAGTGAGACACAAAAACCACCTTGTTTTTGCTGTTCTTCTTCTTCTCCTTCTTTTAAACACTTGATTTTGAAGCTCAAATCTCAATGGAAGCACCATAATTTGAGATGGCAAAATTCAACTGTTAGGTATAGTTATGATCTTCAAAGCTATTCTCTTAACTTTGATGATGGTTTGCTTCATTGATGATGATGATGATGAATGATGATGATGATGATGAAGATTCTACTCTGTTTCTTAATGCTGATATATTTTCCCTTTCTGAAAACCCATTTCTTTATGTAAACACTTCTAATAATTAATGATCTTAAATGGGTTTTGTTTTAATTTGGGAGTTGGCAGCATTTTTTGTTCATGTGTATGTGTTTTTTTTTTAATTGTGAATATGCTTCTCAG

mRNA sequence

AAAAAACCCATTTCTCTCTCTTTTCTTCATAATCTCTTCAAAATTCTGTGAGTGATTTTAAGGGTTTTTGAAAGATGAAATTTTTAGGGTTGAGTTTATGGAAATGGCAATTCATGAAGCTTGGAAATAGGATTGCAAATTCAGGGTCTTCTTCTTCTTCTTCTATTCCTTATGTGGTTAGTGAGACACAAAAACCACCTTGTTTTTGCTGTTCTTCTTCTTCTCCTTCTTTTAAACACTTGATTTTGAAGCTCAAATCTCAATGGAAGCACCATAATTTGAGATGGCAAAATTCAACTGTTAGGTATAGTTATGATCTTCAAAGCTATTCTCTTAACTTTGATGATGGTTTGCTTCATTGATGATGATGATGATGAATGATGATGATGATGATGAAGATTCTACTCTGTTTCTTAATGCTGATATATTTTCCCTTTCTGAAAACCCATTTCTTTATGTAAACACTTCTAATAATTAATGATCTTAAATGGGTTTTGTTTTAATTTGGGAGTTGGCAGCATTTTTTGTTCATGTGTATGTGTTTTTTTTTTAATTGTGAATATGCTTCTCAG

Coding sequence (CDS)

ATGAAATTTTTAGGGTTGAGTTTATGGAAATGGCAATTCATGAAGCTTGGAAATAGGATTGCAAATTCAGGGTCTTCTTCTTCTTCTTCTATTCCTTATGTGGTTAGTGAGACACAAAAACCACCTTGTTTTTGCTGTTCTTCTTCTTCTCCTTCTTTTAAACACTTGATTTTGAAGCTCAAATCTCAATGGAAGCACCATAATTTGAGATGGCAAAATTCAACTGTTAGGTATAGTTATGATCTTCAAAGCTATTCTCTTAACTTTGATGATGGTTTGCTTCATTGA

Protein sequence

MKFLGLSLWKWQFMKLGNRIANSGSSSSSSIPYVVSETQKPPCFCCSSSSPSFKHLILKLKSQWKHHNLRWQNSTVRYSYDLQSYSLNFDDGLLH
Homology
BLAST of PI0029180 vs. ExPASy TrEMBL
Match: A0A0A0L8W7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G608720 PE=4 SV=1)

HSP 1 Score: 191.4 bits (485), Expect = 1.7e-45
Identity = 92/95 (96.84%), Postives = 93/95 (97.89%), Query Frame = 0

Query: 1  MKFLGLSLWKWQFMKLGNRIANSGSSSSSSIPYVVSETQKPPCFCCSSSSPSFKHLILKL 60
          MKFLG SLWKWQFMKLGNRIANSG SSSSSIPYVVS+TQKPPCFCCSSSSPSFKHLILKL
Sbjct: 1  MKFLGFSLWKWQFMKLGNRIANSG-SSSSSIPYVVSDTQKPPCFCCSSSSPSFKHLILKL 60

Query: 61 KSQWKHHNLRWQNSTVRYSYDLQSYSLNFDDGLLH 96
          KSQWKHHNLRWQNSTVRYSYDLQSYSLNFDDGLLH
Sbjct: 61 KSQWKHHNLRWQNSTVRYSYDLQSYSLNFDDGLLH 94

BLAST of PI0029180 vs. ExPASy TrEMBL
Match: A0A1R3K809 (Uncharacterized protein OS=Corchorus olitorius OX=93759 GN=COLO4_10585 PE=4 SV=1)

HSP 1 Score: 70.1 bits (170), Expect = 5.7e-09
Identity = 37/84 (44.05%), Postives = 49/84 (58.33%), Query Frame = 0

Query: 12 QFMKLGNRIANSGSSSSSSIPYVVSETQKPPCFCCSSSSPSFKHLILKLKSQWKHHNLRW 71
          QF+KL  ++AN G +        +   Q+ P  CC S S   K L+ KLKSQWK      
Sbjct: 10 QFLKLEKKVANDGYAMK------LIPVQRKPILCCRSKSYVLKQLMWKLKSQWKQAMKMQ 69

Query: 72 QNSTVRYSYDLQSYSLNFDDGLLH 96
          +N++ ++SYDL SYSLNFDDG  H
Sbjct: 70 RNTSRQFSYDLHSYSLNFDDGFCH 87

BLAST of PI0029180 vs. ExPASy TrEMBL
Match: A0A6A1VJQ4 (Uncharacterized protein OS=Morella rubra OX=262757 GN=CJ030_MR5G024638 PE=4 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 1.7e-08
Identity = 41/86 (47.67%), Postives = 54/86 (62.79%), Query Frame = 0

Query: 7  SLWKWQFMKLGNRIANSGSSSSSSIPYVVSETQKPPCFCCSSSSPSFKHLILKLKSQWKH 66
          SL + +F+KL  RIA++GS+ +     VVS  ++    CC  S+   + L+ K KS WK 
Sbjct: 8  SLRRMEFLKLRKRIASTGSAVT-----VVSAKRRALLDCCRGSN-LLRQLVWKFKSGWK- 67

Query: 67 HNLRWQNSTVRYSYDLQSYSLNFDDG 93
           NL WQ S  +YSYDL SYSLNFDDG
Sbjct: 68 QNLGWQRSKAQYSYDLHSYSLNFDDG 86

BLAST of PI0029180 vs. ExPASy TrEMBL
Match: A0A2N9IXX4 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS57087 PE=4 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 2.2e-08
Identity = 41/84 (48.81%), Postives = 53/84 (63.10%), Query Frame = 0

Query: 12 QFMKLGNRIANSGSSSSSSIPYVVSETQKPPCFCCSSSSPSFKHLILKLKSQWKHHNLRW 71
          QF KLG RIA++GS+S+     + S+ +K    CC  S    + L+ K KSQWK    R 
Sbjct: 2  QFFKLGKRIASTGSAST-----LGSDKRKASLDCCHGSY-VLRQLLWKFKSQWK-QAFRR 61

Query: 72 QNSTVRYSYDLQSYSLNFDDGLLH 96
          Q S+ +YSYDL SYSLNFDDGL +
Sbjct: 62 QRSSAQYSYDLHSYSLNFDDGLFN 78

BLAST of PI0029180 vs. ExPASy TrEMBL
Match: A0A5N6QEZ1 (Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_002472 PE=4 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 2.8e-08
Identity = 39/86 (45.35%), Postives = 52/86 (60.47%), Query Frame = 0

Query: 7  SLWKWQFMKLGNRIANSGSSSSSSIPYVVSETQKPPCFCCSSSSPSFKHLILKLKSQWKH 66
          SL + QF++LG RIA+SG S++      +   ++     C   S + + L+ K KSQWK 
Sbjct: 8  SLRRIQFLQLGKRIASSGPSAT------LGSVKRRRLLDCCHGSYALRQLVGKFKSQWK- 67

Query: 67 HNLRWQNSTVRYSYDLQSYSLNFDDG 93
            L WQ S V+YSYD  SYSLNFDDG
Sbjct: 68 QTLGWQRSRVQYSYDFHSYSLNFDDG 86

BLAST of PI0029180 vs. NCBI nr
Match: KGN58293.1 (hypothetical protein Csa_017624 [Cucumis sativus])

HSP 1 Score: 191.4 bits (485), Expect = 3.5e-45
Identity = 92/95 (96.84%), Postives = 93/95 (97.89%), Query Frame = 0

Query: 1  MKFLGLSLWKWQFMKLGNRIANSGSSSSSSIPYVVSETQKPPCFCCSSSSPSFKHLILKL 60
          MKFLG SLWKWQFMKLGNRIANSG SSSSSIPYVVS+TQKPPCFCCSSSSPSFKHLILKL
Sbjct: 1  MKFLGFSLWKWQFMKLGNRIANSG-SSSSSIPYVVSDTQKPPCFCCSSSSPSFKHLILKL 60

Query: 61 KSQWKHHNLRWQNSTVRYSYDLQSYSLNFDDGLLH 96
          KSQWKHHNLRWQNSTVRYSYDLQSYSLNFDDGLLH
Sbjct: 61 KSQWKHHNLRWQNSTVRYSYDLQSYSLNFDDGLLH 94

BLAST of PI0029180 vs. NCBI nr
Match: KAG6606355.1 (hypothetical protein SDJN03_03672, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 118.2 bits (295), Expect = 3.8e-23
Identity = 64/95 (67.37%), Postives = 71/95 (74.74%), Query Frame = 0

Query: 1  MKFLGLSLWKWQFMKLGNRIANSGSSSSSSIPYVVSETQKPPCFCCSSSSPSFKHLILKL 60
          MK LG SLWKWQF++LGNRIANSGSS S      V +++ PP  C    S S +HLILKL
Sbjct: 1  MKVLGFSLWKWQFLRLGNRIANSGSSIS-----YVGDSKTPPLSC----SSSLRHLILKL 60

Query: 61 KSQWKHHNLRWQNSTVRYSYDLQSYSLNFDDGLLH 96
          K QWK HNLR Q  TV+YSYDLQSYSLNFDDGLLH
Sbjct: 61 KYQWK-HNLRLQKRTVQYSYDLQSYSLNFDDGLLH 85

BLAST of PI0029180 vs. NCBI nr
Match: OMP03199.1 (hypothetical protein COLO4_10585 [Corchorus olitorius])

HSP 1 Score: 70.1 bits (170), Expect = 1.2e-08
Identity = 37/84 (44.05%), Postives = 49/84 (58.33%), Query Frame = 0

Query: 12 QFMKLGNRIANSGSSSSSSIPYVVSETQKPPCFCCSSSSPSFKHLILKLKSQWKHHNLRW 71
          QF+KL  ++AN G +        +   Q+ P  CC S S   K L+ KLKSQWK      
Sbjct: 10 QFLKLEKKVANDGYAMK------LIPVQRKPILCCRSKSYVLKQLMWKLKSQWKQAMKMQ 69

Query: 72 QNSTVRYSYDLQSYSLNFDDGLLH 96
          +N++ ++SYDL SYSLNFDDG  H
Sbjct: 70 RNTSRQFSYDLHSYSLNFDDGFCH 87

BLAST of PI0029180 vs. NCBI nr
Match: KAB1212066.1 (hypothetical protein CJ030_MR5G024638 [Morella rubra])

HSP 1 Score: 68.6 bits (166), Expect = 3.4e-08
Identity = 41/86 (47.67%), Postives = 54/86 (62.79%), Query Frame = 0

Query: 7  SLWKWQFMKLGNRIANSGSSSSSSIPYVVSETQKPPCFCCSSSSPSFKHLILKLKSQWKH 66
          SL + +F+KL  RIA++GS+ +     VVS  ++    CC  S+   + L+ K KS WK 
Sbjct: 8  SLRRMEFLKLRKRIASTGSAVT-----VVSAKRRALLDCCRGSN-LLRQLVWKFKSGWK- 67

Query: 67 HNLRWQNSTVRYSYDLQSYSLNFDDG 93
           NL WQ S  +YSYDL SYSLNFDDG
Sbjct: 68 QNLGWQRSKAQYSYDLHSYSLNFDDG 86

BLAST of PI0029180 vs. NCBI nr
Match: KAE7997876.1 (hypothetical protein FH972_002472 [Carpinus fangiana])

HSP 1 Score: 67.8 bits (164), Expect = 5.8e-08
Identity = 39/86 (45.35%), Postives = 52/86 (60.47%), Query Frame = 0

Query: 7  SLWKWQFMKLGNRIANSGSSSSSSIPYVVSETQKPPCFCCSSSSPSFKHLILKLKSQWKH 66
          SL + QF++LG RIA+SG S++      +   ++     C   S + + L+ K KSQWK 
Sbjct: 8  SLRRIQFLQLGKRIASSGPSAT------LGSVKRRRLLDCCHGSYALRQLVGKFKSQWK- 67

Query: 67 HNLRWQNSTVRYSYDLQSYSLNFDDG 93
            L WQ S V+YSYD  SYSLNFDDG
Sbjct: 68 QTLGWQRSRVQYSYDFHSYSLNFDDG 86

BLAST of PI0029180 vs. TAIR 10
Match: AT5G44005.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 45.1 bits (105), Expect = 3.8e-05
Identity = 34/93 (36.56%), Postives = 49/93 (52.69%), Query Frame = 0

Query: 7  SLWKWQFMKLGNRIANSGSSSSSSIPYVVSETQKPPCF---CCSSSSPSFKHLILKLKSQ 66
          SL + QF + G RI   GSS+++S     +E +    F   CC       K  + +LKS+
Sbjct: 5  SLKRLQFRRWGKRI---GSSTTASATLGNTEERTIVAFAFSCCGKPRVLVKQFVWRLKSR 64

Query: 67 WKHHNLRW----QNSTVRYSYDLQSYSLNFDDG 93
               LRW     ++ ++ SYDL+SY LNFDDG
Sbjct: 65 -----LRWSRKSDHNNIQCSYDLRSYHLNFDDG 89

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0L8W71.7e-4596.84Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G608720 PE=4 SV=1[more]
A0A1R3K8095.7e-0944.05Uncharacterized protein OS=Corchorus olitorius OX=93759 GN=COLO4_10585 PE=4 SV=1[more]
A0A6A1VJQ41.7e-0847.67Uncharacterized protein OS=Morella rubra OX=262757 GN=CJ030_MR5G024638 PE=4 SV=1[more]
A0A2N9IXX42.2e-0848.81Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS57087 PE=4 SV=1[more]
A0A5N6QEZ12.8e-0845.35Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_002472 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
KGN58293.13.5e-4596.84hypothetical protein Csa_017624 [Cucumis sativus][more]
KAG6606355.13.8e-2367.37hypothetical protein SDJN03_03672, partial [Cucurbita argyrosperma subsp. sorori... [more]
OMP03199.11.2e-0844.05hypothetical protein COLO4_10585 [Corchorus olitorius][more]
KAB1212066.13.4e-0847.67hypothetical protein CJ030_MR5G024638 [Morella rubra][more]
KAE7997876.15.8e-0845.35hypothetical protein FH972_002472 [Carpinus fangiana][more]
Match NameE-valueIdentityDescription
AT5G44005.13.8e-0536.56unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR34538:SF4EXPRESSED PROTEINcoord: 1..93
NoneNo IPR availablePANTHERPTHR34538EXPRESSED PROTEINcoord: 1..93

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
PI0029180.1PI0029180.1mRNA