PI0029157 (gene) Melon (PI 482460) v1

Overview


Name	PI0029157
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Unknown protein
Location	chr04: 10033851 .. 10034438 (-)
RNA-Seq Expression	PI0029157
Synteny	PI0029157

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTTCATAGAATAAACGAACGAACGAACGAACGAACGAACGAACGTGTCTTCACCCTCCAAACGATTACTGATTTGAAAACTACCATTTCTTTGTTTCTTTCTTCAATTTCAGGTAATCCAATCTTCCCCTTTTTGCCACAGCTTCTCGATTCTCCATTGATCTTCTTCTTCATCTTATCACTCTTTATCACTCTGTAATTTCTCCCCCTTCTTCCATTCTCTTTCAGTTGCTTCTACAATACGCGTTTCTTCTTTCATTTCCTGCTTGGTTTCCGATTTGATTGTTTGTGCTCGAATCCATTTTCACTGATTTCAAGGTTAGTTTCGCACCTTTTTCTTTCTTCAAATCCATGCTTGCATTTTCAGATCGTGGGATTTGGTATTCTCTTTCTGTTGTAACTGCTGTTGCTCTGCATCAGTTTTGCTGTCGGTTTGGTTTTCTGTATGTTTTTGCGGTTACCACAATTGAAAATGCTTTTTGGGTTTTGCTTTCTGTTCCTTAGGGATTATGCATTGAATGCTCGCATTTGCGTTGATTCTTACTTCTTGATGCTTGCGGCAAATGGATCTTGGATTTGGATATGA

mRNA sequence

ATGGTTCATAGAATAAACGAACGAACGAACGAACGAACGAACGAACGTGTCTTCACCCTCCAAACGATTACTGATTTGAAAACTACCATTTCTTTGTTTCTTTCTTCAATTTCAGGTAATCCAATCTTCCCCTTTTTGCCACAGCTTCTCGATTCTCCATTGATCTTCTTCTTCATCTTATCACTCTTTATCACTCTTTGCTTCTACAATACGCGTTTCTTCTTTCATTTCCTGCTTGGTTTCCGATTTGATTGTTTGTGCTCGAATCCATTTTCACTGATTTCAAGGGATTATGCATTGAATGCTCGCATTTGCGTTGATTCTTACTTCTTGATGCTTGCGGCAAATGGATCTTGGATTTGGATATGA

Coding sequence (CDS)

ATGGTTCATAGAATAAACGAACGAACGAACGAACGAACGAACGAACGTGTCTTCACCCTCCAAACGATTACTGATTTGAAAACTACCATTTCTTTGTTTCTTTCTTCAATTTCAGGTAATCCAATCTTCCCCTTTTTGCCACAGCTTCTCGATTCTCCATTGATCTTCTTCTTCATCTTATCACTCTTTATCACTCTTTGCTTCTACAATACGCGTTTCTTCTTTCATTTCCTGCTTGGTTTCCGATTTGATTGTTTGTGCTCGAATCCATTTTCACTGATTTCAAGGGATTATGCATTGAATGCTCGCATTTGCGTTGATTCTTACTTCTTGATGCTTGCGGCAAATGGATCTTGGATTTGGATATGA

Protein sequence

MVHRINERTNERTNERVFTLQTITDLKTTISLFLSSISGNPIFPFLPQLLDSPLIFFFILSLFITLCFYNTRFFFHFLLGFRFDCLCSNPFSLISRDYALNARICVDSYFLMLAANGSWIWI

Homology

[Close]

BLAST of PI0029157 vs. ExPASy TrEMBL
Match: A0A0A0LD69 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G842650 PE=4 SV=1)

HSP 1 Score: 196.1 bits (497), Expect = 8.8e-47
Identity = 110/131 (83.97%), Postives = 111/131 (84.73%), Query Frame = 0


Query: 1   MVHRINERTNERTNERVFTLQTITDLKTTISLFLSSISGNPIFPFLPQLLDSPLIFFFIL 60
           MVHRI    NERTNE VFTLQTITDLKTTISLFLSSISGNPIFPFLPQLLDSPLIFFFIL
Sbjct: 1   MVHRI----NERTNEHVFTLQTITDLKTTISLFLSSISGNPIFPFLPQLLDSPLIFFFIL 60

Query: 61  SLFIT-----------LCFYNTRFFFHFLLGFRFDCLCSNPFSLISRDYALNARICVDSY 120
           SLFIT            CFYNT FFFHFLLG RFDCLCSNPFSLISRDYALNARIC+DSY
Sbjct: 61  SLFITQSFLPLLPFSLSCFYNTCFFFHFLLGSRFDCLCSNPFSLISRDYALNARICIDSY 120

[Close]

BLAST of PI0029157 vs. NCBI nr
Match: KGN59743.1 (hypothetical protein Csa_001743 [Cucumis sativus])

HSP 1 Score: 196.1 bits (497), Expect = 1.8e-46
Identity = 110/131 (83.97%), Postives = 111/131 (84.73%), Query Frame = 0


Query: 1   MVHRINERTNERTNERVFTLQTITDLKTTISLFLSSISGNPIFPFLPQLLDSPLIFFFIL 60
           MVHRI    NERTNE VFTLQTITDLKTTISLFLSSISGNPIFPFLPQLLDSPLIFFFIL
Sbjct: 1   MVHRI----NERTNEHVFTLQTITDLKTTISLFLSSISGNPIFPFLPQLLDSPLIFFFIL 60

Query: 61  SLFIT-----------LCFYNTRFFFHFLLGFRFDCLCSNPFSLISRDYALNARICVDSY 120
           SLFIT            CFYNT FFFHFLLG RFDCLCSNPFSLISRDYALNARIC+DSY
Sbjct: 61  SLFITQSFLPLLPFSLSCFYNTCFFFHFLLGSRFDCLCSNPFSLISRDYALNARICIDSY 120

The following BLAST results are available for this feature:

BLAST of PI0029157 vs.


Match Name	E-value	Identity	Description

BLAST of PI0029157 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LD69	8.8e-47	83.97	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G842650 PE=4 SV=1	[more]

BLAST of PI0029157 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN59743.1	1.8e-46	83.97	hypothetical protein Csa_001743 [Cucumis sativus]	[more]

BLAST of PI0029157 vs. NCBI nr


Match Name	E-value	Identity	Description

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0029157.1	PI0029157.1	mRNA