PI0029067 (gene) Melon (PI 482460) v1

Overview


Name	PI0029067
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	CACTA en-spm transposon protein
Location	chr01: 12817044 .. 12818235 (+)
RNA-Seq Expression	PI0029067
Synteny	PI0029067

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTATCGGTTGACTTCATGATGTCTCTCAGGTCGAGAGAAGGTGATTTGGGAGAGGTTGTGACACCCGACAACCTAAAAGTACCCGTCGAGAGTGCTCTATAACTCCTGATGATTTTTTTAATCGTCATGAGTTTGCTTTTAAAACCCTATTTTAGATTTGCATTTCACAGATCTGAAGAGGGTGGGTGAAGAGGAAAAGACAGAGATCGATCGTTCCCCTTTTTGTTATTCACCGCCTTTTGTCGCCTTCCACCATTGGGCCGACGCCGCTTCGGCCACCGGTCTCCTCGTCCACCGCTGCCACCAAGTATCGCTTCCAGTATGAACCATTCCTCTTTTGCTCTACATTTTGAAGTTTCTATGTCTTGGTTGTGATAAATTAGATGTCATAAATTGGATTTAGGGTTTGATTGTGATTCAAGTTTAGGTTGTGATAGATTGGATTAAAGTTTCTCTTTTTTGTGATAATTTTGGGGTTATGCAATGCTAGCATTTTTTCTTAATTTTGATTGAGAAATTATGATTGAAGTGAAATAATGTATGAAATTTTGGGGTTGAGATTAATTGTTGCTTACTTTATTGAAGTTGCATAATGTATGAAATTTTGTGGTTGAGACTAATTGTGATTGAAGTTTCTCTTTCTTTTTACTTGAGTGAAGGATTTCAGGTAATTACCTCTCTTTAATATATCATTGTCTAATATAATAATATACTTAATATATTATTTTGTTGTTTGCATGTAGGAGCAATCAAAGACGAATAAGCATAATAGAGAAAAACAACCATTTCATCATAGTAGTGGGTCGAAGTCATTCCTACAGAGACAATTTGAGCTCAGTGAACAACGAGGTGAACCAGTAAGACGTATGGACCTATTCAAGGAAACACACTCCAATAAGAGTGCCCAGTTCGTGAATTAGGTAACTAAGGATGCACATGTAAGAAAAGTGGTTTATTTGCTTGATTATTTCGAGTGCATAAATTAACTATTTGTGTGCAGAATCAAATGATGAAATTACTATCGACACCCACTCTAGAAGGTTCTCAACCACTATCCGAAGACGAAATATGCGAGACAGTTTTGGGTAGACGACCCGGTTACTCAAAAGGTCTTGGTTGGGCCCTAAACTCAAGTCAAGGAGGAGTAGTAGTTCATCGAGTTCGACGTCCCAAGAAATGCATGATATGA

mRNA sequence

ATGGTATCGGTTGACTTCATGATGTCTCTCAGGTCGAGAGAAGATCTGAAGAGGGTGGGTGAAGAGGAAAAGACAGAGATCGATCGTTCCCCTTTTTGTTATTCACCGCCTTTTGTCGCCTTCCACCATTGGGCCGACGCCGCTTCGGCCACCGGTCTCCTCGTCCACCGCTGCCACCAAGTATCGCTTCCAGAGCAATCAAAGACGAATAAGCATAATAGAGAAAAACAACCATTTCATCATAGTAGTGGGTCGAAGTCATTCCTACAGAGACAATTTGAGCTCAGTGAACAACGAGGTGAACCAAATCAAATGATGAAATTACTATCGACACCCACTCTAGAAGGTTCTCAACCACTATCCGAAGACGAAATATGCGAGACAGTTTTGGGTAGACGACCCGGTTACTCAAAAGGTCTTGGTTGGGCCCTAAACTCAAGTCAAGGAGGAGTAGTAGTTCATCGAGTTCGACGTCCCAAGAAATGCATGATATGA

Coding sequence (CDS)

ATGGTATCGGTTGACTTCATGATGTCTCTCAGGTCGAGAGAAGATCTGAAGAGGGTGGGTGAAGAGGAAAAGACAGAGATCGATCGTTCCCCTTTTTGTTATTCACCGCCTTTTGTCGCCTTCCACCATTGGGCCGACGCCGCTTCGGCCACCGGTCTCCTCGTCCACCGCTGCCACCAAGTATCGCTTCCAGAGCAATCAAAGACGAATAAGCATAATAGAGAAAAACAACCATTTCATCATAGTAGTGGGTCGAAGTCATTCCTACAGAGACAATTTGAGCTCAGTGAACAACGAGGTGAACCAAATCAAATGATGAAATTACTATCGACACCCACTCTAGAAGGTTCTCAACCACTATCCGAAGACGAAATATGCGAGACAGTTTTGGGTAGACGACCCGGTTACTCAAAAGGTCTTGGTTGGGCCCTAAACTCAAGTCAAGGAGGAGTAGTAGTTCATCGAGTTCGACGTCCCAAGAAATGCATGATATGA

Protein sequence

MVSVDFMMSLRSREDLKRVGEEEKTEIDRSPFCYSPPFVAFHHWADAASATGLLVHRCHQVSLPEQSKTNKHNREKQPFHHSSGSKSFLQRQFELSEQRGEPNQMMKLLSTPTLEGSQPLSEDEICETVLGRRPGYSKGLGWALNSSQGGVVVHRVRRPKKCMI

Homology

[Close]

BLAST of PI0029067 vs. ExPASy TrEMBL
Match: A0A5A7TPH1 (CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold294G00310 PE=4 SV=1)

HSP 1 Score: 118.6 bits (296), Expect = 2.4e-23
Identity = 67/128 (52.34%), Postives = 81/128 (63.28%), Query Frame = 0


Query: 65  EQSKTNKHNREKQPFHHSSGSKSFLQRQFELSEQRGEP---------------------- 124
           EQS+TNK  R+KQP++HSSGSKSFLQRQ++L+E+RG+P                      
Sbjct: 306 EQSRTNKAARQKQPYNHSSGSKSFLQRQYKLTERRGQPVDCVELFRETHVRAGIFVSQAT 365

Query: 125 ----NQMMKLLSTPTLEGSQPLSEDEICETVLGRRPGYSKGLGW-----ALNSSQGGVVV 162
               NQM++L S PT EGSQPLSEDEIC+ VLGRRPGYSKGLGW     A  ++  G   
Sbjct: 366 EDAHNQMLELQSQPTPEGSQPLSEDEICDQVLGRRPGYSKGLGWGPKPKARRTASAGSCR 425

[Close]

BLAST of PI0029067 vs. ExPASy TrEMBL
Match: A0A5A7TT95 (CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold427G00150 PE=4 SV=1)

HSP 1 Score: 117.5 bits (293), Expect = 5.4e-23
Identity = 60/89 (67.42%), Postives = 71/89 (79.78%), Query Frame = 0


Query: 65  EQSKTNKHNREKQPFHHSSGSKSFLQRQFELSEQRGEP-----------NQMMKLLSTPT 124
           EQS+ NK  R+KQP++HSSGSKSFLQRQ+EL+E+RG+P           NQM++L S PT
Sbjct: 156 EQSRINKAARQKQPYNHSSGSKSFLQRQYELAERRGQPVDRVELFRETHNQMLELQSQPT 215

Query: 125 LEGSQPLSEDEICETVLGRRPGYSKGLGW 143
            EGSQPLSEDEIC+ VLGRRPGYSKGLGW
Sbjct: 216 PEGSQPLSEDEICDQVLGRRPGYSKGLGW 244

[Close]

BLAST of PI0029067 vs. ExPASy TrEMBL
Match: A0A5A7SM06 (CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold223G00260 PE=4 SV=1)

HSP 1 Score: 115.9 bits (289), Expect = 1.6e-22
Identity = 65/126 (51.59%), Postives = 78/126 (61.90%), Query Frame = 0


Query: 43  HWADAASATGLLVHRCHQVSLPEQSKTNKHNREKQPFHHSSGSKSFLQRQFELSEQRGEP 102
           HW D       +V     +   EQS+TNK  R+KQP++HSSGSKSFLQRQ+EL+E+RG+P
Sbjct: 142 HWLDVMR----IVTSSATIISAEQSRTNKAARQKQPYNHSSGSKSFLQRQYELAERRGQP 201

Query: 103 --------------------------NQMMKLLSTPTLEGSQPLSEDEICETVLGRRPGY 143
                                     NQM++L S PT EGSQPLSEDEIC+ VLGRRPGY
Sbjct: 202 VDRVELFRETHVRAGTFVSQAAEDAYNQMLELQSQPTPEGSQPLSEDEICDQVLGRRPGY 261

[Close]

BLAST of PI0029067 vs. ExPASy TrEMBL
Match: A0A5A7V484 (CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold2406G00080 PE=4 SV=1)

HSP 1 Score: 115.2 bits (287), Expect = 2.7e-22
Identity = 65/116 (56.03%), Postives = 76/116 (65.52%), Query Frame = 0


Query: 59  HQVSLP--EQSKTNKHNREKQPFHHSSGSKSFLQRQFELSEQRGEP-------------- 118
           H +S P  EQS+TNK  R+KQP++HSSGSKSFLQRQ+EL+E+RG+               
Sbjct: 181 HYISRPFQEQSRTNKAVRQKQPYNHSSGSKSFLQRQYELAERRGQSVDRVELFRETHVRA 240

Query: 119 ------------NQMMKLLSTPTLEGSQPLSEDEICETVLGRRPGYSKGLGWALNS 147
                       NQM+KL S PT EGSQPLSEDEIC+ VLGRRPGYSKGLGW   S
Sbjct: 241 GTFVSQAAEDAHNQMLKLQSQPTPEGSQPLSEDEICDQVLGRRPGYSKGLGWGPKS 296

[Close]

BLAST of PI0029067 vs. ExPASy TrEMBL
Match: A0A5D3DGB2 (CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold195G00130 PE=4 SV=1)

HSP 1 Score: 114.8 bits (286), Expect = 3.5e-22
Identity = 61/106 (57.55%), Postives = 73/106 (68.87%), Query Frame = 0


Query: 63  LPEQSKTNKHNREKQPFHHSSGSKSFLQRQFELSEQRGEP-------------------- 122
           + EQS+TNK  R+KQP++HSSGSKSFLQRQ+EL+E+RG+P                    
Sbjct: 1   MQEQSRTNKAARQKQPYNHSSGSKSFLQRQYELAERRGQPVDRVELFRETHVRAGTFVSQ 60

Query: 123 ------NQMMKLLSTPTLEGSQPLSEDEICETVLGRRPGYSKGLGW 143
                 NQM++L S PT EGSQPLSEDEIC+ VLGRRPGYSKGLGW
Sbjct: 61  AAEDAHNQMLELQSQPTPEGSQPLSEDEICDQVLGRRPGYSKGLGW 106

[Close]

BLAST of PI0029067 vs. NCBI nr
Match: KAA0045433.1 (CACTA en-spm transposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 118.6 bits (296), Expect = 5.0e-23
Identity = 67/128 (52.34%), Postives = 81/128 (63.28%), Query Frame = 0


Query: 65  EQSKTNKHNREKQPFHHSSGSKSFLQRQFELSEQRGEP---------------------- 124
           EQS+TNK  R+KQP++HSSGSKSFLQRQ++L+E+RG+P                      
Sbjct: 306 EQSRTNKAARQKQPYNHSSGSKSFLQRQYKLTERRGQPVDCVELFRETHVRAGIFVSQAT 365

Query: 125 ----NQMMKLLSTPTLEGSQPLSEDEICETVLGRRPGYSKGLGW-----ALNSSQGGVVV 162
               NQM++L S PT EGSQPLSEDEIC+ VLGRRPGYSKGLGW     A  ++  G   
Sbjct: 366 EDAHNQMLELQSQPTPEGSQPLSEDEICDQVLGRRPGYSKGLGWGPKPKARRTASAGSCR 425

[Close]

BLAST of PI0029067 vs. NCBI nr
Match: KAA0046652.1 (CACTA en-spm transposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 117.5 bits (293), Expect = 1.1e-22
Identity = 60/89 (67.42%), Postives = 71/89 (79.78%), Query Frame = 0


Query: 65  EQSKTNKHNREKQPFHHSSGSKSFLQRQFELSEQRGEP-----------NQMMKLLSTPT 124
           EQS+ NK  R+KQP++HSSGSKSFLQRQ+EL+E+RG+P           NQM++L S PT
Sbjct: 156 EQSRINKAARQKQPYNHSSGSKSFLQRQYELAERRGQPVDRVELFRETHNQMLELQSQPT 215

Query: 125 LEGSQPLSEDEICETVLGRRPGYSKGLGW 143
            EGSQPLSEDEIC+ VLGRRPGYSKGLGW
Sbjct: 216 PEGSQPLSEDEICDQVLGRRPGYSKGLGW 244

[Close]

BLAST of PI0029067 vs. NCBI nr
Match: KAA0032062.1 (CACTA en-spm transposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 115.9 bits (289), Expect = 3.2e-22
Identity = 65/126 (51.59%), Postives = 78/126 (61.90%), Query Frame = 0


Query: 43  HWADAASATGLLVHRCHQVSLPEQSKTNKHNREKQPFHHSSGSKSFLQRQFELSEQRGEP 102
           HW D       +V     +   EQS+TNK  R+KQP++HSSGSKSFLQRQ+EL+E+RG+P
Sbjct: 142 HWLDVMR----IVTSSATIISAEQSRTNKAARQKQPYNHSSGSKSFLQRQYELAERRGQP 201

Query: 103 --------------------------NQMMKLLSTPTLEGSQPLSEDEICETVLGRRPGY 143
                                     NQM++L S PT EGSQPLSEDEIC+ VLGRRPGY
Sbjct: 202 VDRVELFRETHVRAGTFVSQAAEDAYNQMLELQSQPTPEGSQPLSEDEICDQVLGRRPGY 261

[Close]

BLAST of PI0029067 vs. NCBI nr
Match: KAA0062853.1 (CACTA en-spm transposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 115.2 bits (287), Expect = 5.5e-22
Identity = 65/116 (56.03%), Postives = 76/116 (65.52%), Query Frame = 0


Query: 59  HQVSLP--EQSKTNKHNREKQPFHHSSGSKSFLQRQFELSEQRGEP-------------- 118
           H +S P  EQS+TNK  R+KQP++HSSGSKSFLQRQ+EL+E+RG+               
Sbjct: 181 HYISRPFQEQSRTNKAVRQKQPYNHSSGSKSFLQRQYELAERRGQSVDRVELFRETHVRA 240

Query: 119 ------------NQMMKLLSTPTLEGSQPLSEDEICETVLGRRPGYSKGLGWALNS 147
                       NQM+KL S PT EGSQPLSEDEIC+ VLGRRPGYSKGLGW   S
Sbjct: 241 GTFVSQAAEDAHNQMLKLQSQPTPEGSQPLSEDEICDQVLGRRPGYSKGLGWGPKS 296

[Close]

BLAST of PI0029067 vs. NCBI nr
Match: TYK09466.1 (CACTA en-spm transposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 114.8 bits (286), Expect = 7.2e-22
Identity = 62/108 (57.41%), Postives = 73/108 (67.59%), Query Frame = 0


Query: 65  EQSKTNKHNREKQPFHHSSGSKSFLQRQFELSEQRGEP---------------------- 124
           EQS+TNK  R+KQP++HSSGSKSFLQRQ+EL+E++GEP                      
Sbjct: 7   EQSRTNKAARQKQPYNHSSGSKSFLQRQYELAERKGEPVNCVELFRKTHVRAGTFVSQAA 66

Query: 125 ----NQMMKLLSTPTLEGSQPLSEDEICETVLGRRPGYSKGLGWALNS 147
               NQM++L S PT EGSQPLSEDEIC+ VLGRRPGYSKGLGW   S
Sbjct: 67  ENAHNQMLELQSQPTPEGSQPLSEDEICDQVLGRRPGYSKGLGWGPKS 114

The following BLAST results are available for this feature:

BLAST of PI0029067 vs.


Match Name	E-value	Identity	Description

BLAST of PI0029067 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TPH1	2.4e-23	52.34	CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_...	[more]
A0A5A7TT95	5.4e-23	67.42	CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_...	[more]
A0A5A7SM06	1.6e-22	51.59	CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_...	[more]
A0A5A7V484	2.7e-22	56.03	CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_...	[more]
A0A5D3DGB2	3.5e-22	57.55	CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]

BLAST of PI0029067 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0045433.1	5.0e-23	52.34	CACTA en-spm transposon protein [Cucumis melo var. makuwa]	[more]
KAA0046652.1	1.1e-22	67.42	CACTA en-spm transposon protein [Cucumis melo var. makuwa]	[more]
KAA0032062.1	3.2e-22	51.59	CACTA en-spm transposon protein [Cucumis melo var. makuwa]	[more]
KAA0062853.1	5.5e-22	56.03	CACTA en-spm transposon protein [Cucumis melo var. makuwa]	[more]
TYK09466.1	7.2e-22	57.41	CACTA en-spm transposon protein [Cucumis melo var. makuwa]	[more]

BLAST of PI0029067 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 64..87

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0029067.1	PI0029067.1	mRNA