PI0029046 (gene) Melon (PI 482460) v1

Overview


Name	PI0029046
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	40S ribosomal protein S9-2-like
Location	chr10: 19323009 .. 19324624 (-)
RNA-Seq Expression	PI0029046
Synteny	PI0029046

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTGCACGTCTCCTTCTATCGTAATTGTGAGTACACTCATTTCAGCTACTTTATGAAACTGCATATCCATCGTTTTCTACATCGACAACCAAAAGATCTGCTTTGCATTTACATTAGTTTCCTATTAATGCTTCCATTTTTTTAATTCACTATTTATCCTATGATTTTCTTCCGGTTGTGTTGTTTCGATACTATAGGCTATTTGGTTAATACTAGATTAGATGGATCCAAGGGGGATTATCTGTTTATGTTTACATGGTGGTTAGATTAGAAATTATAGAGTTTCAGATTCATAGGATTAAATGTATAATGCTGGAGAATCTCCCTTGTTTTTATTTCTTTTCTTTTGAACGTTTGTTCAGTTCATTTTGTGGAGTTTAATATGTGACATAGTAGCTCTTACTACAGTATGTTTTCTTAGAACCATGATTATTGAATAGTGGGTTCTGTCATTTTATAGATGGAAAGACTTTTAAGAAGCCTCGACGTCCTTATGAGAAGGAGCGTTTGGATGCGGAACTTAAGCTTGTAGGTGAATATGGTCTTCGTTGTAAAAGAGAGCTATGGAGGGTTCAATATGCATTGAGCCGAATCCGTAATAATGCAAGGATGCTTTTAACTCTTGATGAAAAAATCCGCGTAGGATTTTTGAGGGTGAGGCTCTGCTTAGGAGGATGAATAGGTATGGTCTTTTGGATGAGAGTCAAAACAAGCTTGATTATGTCTTGGCTCTTACTGTTGAGAATTTCCTCGAGCGTCGTCTCCAAACTCTTGTATTCAAGTCTGGAATGGCTAAATCTATTCACCATGCTAGAGTGCTCATCAGACAAAAGCATATAAGGTACGGTAGCTTAATTATCTTATTCTCAGAAGAATTATACTTCATTGTTTCAACGTGATCACTTTATATAAACAACATTCTTTTGTAGATATATTGTATCACATACGCTTTAGCTGGTTTCAACTGTGCTCTTGCAATTTCAAGAGTTCAATTTTAATCATTATGCTTCTAGTTTCTGAAATTTCTGTAATTTCTCTTTCTTGTGATTTACCAAAATATTTGGGATTTTCCAAAAATCAATGTTGGAAATTCAAGGTCGGGCTTGGAAATGATGGATAGCCAGAAGTTTAAACTTATTTTATATCTCATCAAGCGAGCTACTATGCACGTTAATGTATTCAAACATATTATGCAGGGCACAATTGAAACCAGCCCTAATGTTTAAGTTGTATTTTAGATAACATAGCATTGACTTTCTTTCTTTTCCCAATAGCTGTTTGAAGTGCATTTGCACTGTATTTGAAATTCTTTATGGTCGATGGACAACTGTTGCGAGATGTAGCAGTCTCTACATATATGTCTGTATACTCTTAAAACATTTATTGTTAATGTTTTCATCTGTGTTAACATTTGAGTCCTGTACATTTTAGGGTTGGGAGGCAAGTGGTCAACATCCCTTCTTTCATGGTGAGAGTTGATTCACAAAGCACATAGACTTCTCTCTTACCAGTCCATTTGGAGGTGGACGCCCCGGAAGGGTGAAGAGAAAGAACCAGAAGGCAGCAGCCAAGAAGGCTGCTGGTGGAGATGGAGATGAAGAAGACGAGGATTGA

mRNA sequence

ATGGTGCACGTCTCCTTCTATCGTAATTATGGAAAGACTTTTAAGAAGCCTCGACGTCCTTATGAGAAGGAGCGTTTGGATGCGGAACTTAAGCTTGTAGGTGAATATGGTCTTCGTTGTAAAAGAGAGCTATGGAGGGTTCAATATGCATTGAGCCGAATCCGTAATAATGCAAGGATGATTTTTGAGGGTGAGGCTCTGCTTAGGAGGATGAATAGGTATGGTCTTTTGGATGAGAGTCAAAACAAGCTTGATTATGTCTTGGCTCTTACTGTTGAGAATTTCCTCGAGCGTCGTCTCCAAACTCTTGTATTCAAGTCTGGAATGGCTAAATCTATTCACCATGCTAGAGTGCTCATCAGACAAAAGCATATAAGGGTTGGGAGGCAAGTGGTCAACATCCCTTCTTTCATGGTGAGAGTTGATTCACAAAGTGGACGCCCCGGAAGGGTGAAGAGAAAGAACCAGAAGGCAGCAGCCAAGAAGGCTGCTGGTGGAGATGGAGATGAAGAAGACGAGGATTGA

Coding sequence (CDS)

ATGGTGCACGTCTCCTTCTATCGTAATTATGGAAAGACTTTTAAGAAGCCTCGACGTCCTTATGAGAAGGAGCGTTTGGATGCGGAACTTAAGCTTGTAGGTGAATATGGTCTTCGTTGTAAAAGAGAGCTATGGAGGGTTCAATATGCATTGAGCCGAATCCGTAATAATGCAAGGATGATTTTTGAGGGTGAGGCTCTGCTTAGGAGGATGAATAGGTATGGTCTTTTGGATGAGAGTCAAAACAAGCTTGATTATGTCTTGGCTCTTACTGTTGAGAATTTCCTCGAGCGTCGTCTCCAAACTCTTGTATTCAAGTCTGGAATGGCTAAATCTATTCACCATGCTAGAGTGCTCATCAGACAAAAGCATATAAGGGTTGGGAGGCAAGTGGTCAACATCCCTTCTTTCATGGTGAGAGTTGATTCACAAAGTGGACGCCCCGGAAGGGTGAAGAGAAAGAACCAGAAGGCAGCAGCCAAGAAGGCTGCTGGTGGAGATGGAGATGAAGAAGACGAGGATTGA

Protein sequence

MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARMIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGMAKSIHHARVLIRQKHIRVGRQVVNIPSFMVRVDSQSGRPGRVKRKNQKAAAKKAAGGDGDEEDED

Homology

[Close]

BLAST of PI0029046 vs. ExPASy Swiss-Prot
Match: Q9FLF0 (40S ribosomal protein S9-2 OS=Arabidopsis thaliana OX=3702 GN=RPS9C PE=1 SV=1)

HSP 1 Score: 293.9 bits (751), Expect = 1.2e-78
Identity = 156/197 (79.19%), Postives = 168/197 (85.28%), Query Frame = 0


Query: 1   MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRN---- 60
           MV+V FYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQY LSRIRN    
Sbjct: 1   MVNVRFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYTLSRIRNAARE 60

Query: 61  -------NARMIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGM 120
                  N R IFEGEALLRRMNRYGLLDE+QNKLDYVLALTVENFLERRLQT+VFKSGM
Sbjct: 61  LLTLDEKNPRRIFEGEALLRRMNRYGLLDETQNKLDYVLALTVENFLERRLQTIVFKSGM 120

Query: 121 AKSIHHARVLIRQKHIRVGRQVVNIPSFMVRVDSQ------------SGRPGRVKRKNQK 175
           AKSIHHARVLIRQ+HIRVGRQ+VNIPSFMVRV+SQ             GRPGRVKR+N++
Sbjct: 121 AKSIHHARVLIRQRHIRVGRQLVNIPSFMVRVESQKHVDFSLTSPFGGGRPGRVKRRNER 180

[Close]

BLAST of PI0029046 vs. ExPASy Swiss-Prot
Match: Q9LXG1 (40S ribosomal protein S9-1 OS=Arabidopsis thaliana OX=3702 GN=RPS9B PE=1 SV=1)

HSP 1 Score: 277.3 bits (708), Expect = 1.2e-73
Identity = 150/198 (75.76%), Postives = 166/198 (83.84%), Query Frame = 0


Query: 1   MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNA-- 60
           MVHV +YRNYGKTFK PRRPYEKERLD+ELKLVGEYGLR KRELWRVQY+LSRIRN A  
Sbjct: 1   MVHVCYYRNYGKTFKGPRRPYEKERLDSELKLVGEYGLRNKRELWRVQYSLSRIRNAARD 60

Query: 61  ---------RMIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGM 120
                    R IFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQT+VFKSGM
Sbjct: 61  LLTLDEKSPRRIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTIVFKSGM 120

Query: 121 AKSIHHARVLIRQKHIRVGRQVVNIPSFMVRVDSQ------------SGRPGRVKRKNQK 173
           AKSIHH+RVLIRQ+HIRVG+Q+VNIPSFMVR+DSQ             GRPGRVKR+N+K
Sbjct: 121 AKSIHHSRVLIRQRHIRVGKQLVNIPSFMVRLDSQKHIDFALTSPFGGGRPGRVKRRNEK 180

[Close]

BLAST of PI0029046 vs. ExPASy Swiss-Prot
Match: P52810 (40S ribosomal protein S9 OS=Podospora anserina OX=2587412 GN=RPS9 PE=3 SV=1)

HSP 1 Score: 205.3 bits (521), Expect = 5.6e-52
Identity = 119/191 (62.30%), Postives = 140/191 (73.30%), Query Frame = 0


Query: 8   RNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNAR-------- 67
           R+Y KT K PRRP+E  RLD+ELKLVGEYGLR KRE+WRV   LS+IR  AR        
Sbjct: 4   RSYSKTAKVPRRPFEAARLDSELKLVGEYGLRNKREVWRVLLTLSKIRRAARELLTLDEK 63

Query: 68  ---MIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGMAKSIHHA 127
               +FEG AL+RR+ R G+LDES+ KLDYVLAL  E+FLERRLQTLV+K G+AKSIHHA
Sbjct: 64  DPKRLFEGNALIRRLVRVGVLDESRMKLDYVLALKAEDFLERRLQTLVYKLGLAKSIHHA 123

Query: 128 RVLIRQKHIRVGRQVVNIPSFMVRVDSQ------------SGRPGRVKRKNQKAAAKKAA 175
           RVLIRQ+HIRVG+Q+VN+PSF+VR+DSQ             GRPGRV+RK     AK A 
Sbjct: 124 RVLIRQRHIRVGKQIVNVPSFVVRLDSQKHIDFALTSPFGGGRPGRVRRKK----AKAAE 183

[Close]

BLAST of PI0029046 vs. ExPASy Swiss-Prot
Match: P55935 (40S ribosomal protein S9 OS=Drosophila melanogaster OX=7227 GN=RpS9 PE=1 SV=2)

HSP 1 Score: 201.1 bits (510), Expect = 1.1e-50
Identity = 114/188 (60.64%), Postives = 136/188 (72.34%), Query Frame = 0


Query: 10  YGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNAR---------- 69
           + KT+  PRRPYEK RLD ELK++GEYGLR KRE+WRV+YAL++IR  AR          
Sbjct: 10  FSKTYVTPRRPYEKARLDQELKIIGEYGLRNKREVWRVKYALAKIRKAARELLTLDEKDE 69

Query: 70  -MIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGMAKSIHHARV 129
             +F+G ALLRR+ R G+LDES+ KLDYVL L +E+FLERRLQT VFK G+AKSIHHARV
Sbjct: 70  KRLFQGNALLRRLVRIGVLDESRMKLDYVLGLKIEDFLERRLQTQVFKLGLAKSIHHARV 129

Query: 130 LIRQKHIRVGRQVVNIPSFMVRVDSQ------------SGRPGRVKRKNQKAAAKKAAGG 175
           LIRQ+HIRV +QVVNIPSF+VR+DSQ             GRPGRVKRKN K    +  GG
Sbjct: 130 LIRQRHIRVRKQVVNIPSFVVRLDSQKHIDFSLKSPFGGGRPGRVKRKNLK--KNQGGGG 189

[Close]

BLAST of PI0029046 vs. ExPASy Swiss-Prot
Match: B4PEU8 (40S ribosomal protein S9 OS=Drosophila yakuba OX=7245 GN=RpS9 PE=2 SV=1)

HSP 1 Score: 201.1 bits (510), Expect = 1.1e-50
Identity = 114/188 (60.64%), Postives = 136/188 (72.34%), Query Frame = 0


Query: 10  YGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNAR---------- 69
           + KT+  PRRPYEK RLD ELK++GEYGLR KRE+WRV+YAL++IR  AR          
Sbjct: 10  FSKTYVTPRRPYEKARLDQELKIIGEYGLRNKREVWRVKYALAKIRKAARELLTLDEKDE 69

Query: 70  -MIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGMAKSIHHARV 129
             +F+G ALLRR+ R G+LDES+ KLDYVL L +E+FLERRLQT VFK G+AKSIHHARV
Sbjct: 70  KRLFQGNALLRRLVRIGVLDESRMKLDYVLGLKIEDFLERRLQTQVFKLGLAKSIHHARV 129

Query: 130 LIRQKHIRVGRQVVNIPSFMVRVDSQ------------SGRPGRVKRKNQKAAAKKAAGG 175
           LIRQ+HIRV +QVVNIPSF+VR+DSQ             GRPGRVKRKN K    +  GG
Sbjct: 130 LIRQRHIRVRKQVVNIPSFVVRLDSQKHIDFSLKSPFGGGRPGRVKRKNLK--KNQGGGG 189

[Close]

BLAST of PI0029046 vs. ExPASy TrEMBL
Match: A0A6J1JAT4 (40S ribosomal protein S9-2-like OS=Cucurbita maxima OX=3661 GN=LOC111485110 PE=3 SV=1)

HSP 1 Score: 318.9 bits (816), Expect = 1.3e-83
Identity = 173/197 (87.82%), Postives = 173/197 (87.82%), Query Frame = 0


Query: 1   MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARM 60
           MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARM
Sbjct: 1   MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARM 60

Query: 61  -----------IFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGM 120
                      IFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGM
Sbjct: 61  LLTLDEKNPRRIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGM 120

Query: 121 AKSIHHARVLIRQKHIRVGRQVVNIPSFMVRVDSQ------------SGRPGRVKRKNQK 175
           AKSIHHARVLIRQKHIRVGRQVVNIPSFMVRVDSQ             GRPGRVKRKNQK
Sbjct: 121 AKSIHHARVLIRQKHIRVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVKRKNQK 180

[Close]

BLAST of PI0029046 vs. ExPASy TrEMBL
Match: A0A0A0KSN1 (S4 RNA-binding domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G604980 PE=3 SV=1)

HSP 1 Score: 318.9 bits (816), Expect = 1.3e-83
Identity = 173/197 (87.82%), Postives = 173/197 (87.82%), Query Frame = 0


Query: 1   MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARM 60
           MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARM
Sbjct: 1   MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARM 60

Query: 61  -----------IFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGM 120
                      IFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGM
Sbjct: 61  LLTLDEKNPRRIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGM 120

Query: 121 AKSIHHARVLIRQKHIRVGRQVVNIPSFMVRVDSQ------------SGRPGRVKRKNQK 175
           AKSIHHARVLIRQKHIRVGRQVVNIPSFMVRVDSQ             GRPGRVKRKNQK
Sbjct: 121 AKSIHHARVLIRQKHIRVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVKRKNQK 180

[Close]

BLAST of PI0029046 vs. ExPASy TrEMBL
Match: A0A1S3CA34 (40S ribosomal protein S9-2 OS=Cucumis melo OX=3656 GN=LOC103498678 PE=3 SV=1)

HSP 1 Score: 318.9 bits (816), Expect = 1.3e-83
Identity = 173/197 (87.82%), Postives = 173/197 (87.82%), Query Frame = 0


Query: 1   MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARM 60
           MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARM
Sbjct: 1   MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARM 60

Query: 61  -----------IFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGM 120
                      IFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGM
Sbjct: 61  LLTLDEKNPRRIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGM 120

Query: 121 AKSIHHARVLIRQKHIRVGRQVVNIPSFMVRVDSQ------------SGRPGRVKRKNQK 175
           AKSIHHARVLIRQKHIRVGRQVVNIPSFMVRVDSQ             GRPGRVKRKNQK
Sbjct: 121 AKSIHHARVLIRQKHIRVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVKRKNQK 180

[Close]

BLAST of PI0029046 vs. ExPASy TrEMBL
Match: A0A6J1EC07 (40S ribosomal protein S9-2-like OS=Cucurbita moschata OX=3662 GN=LOC111432674 PE=3 SV=1)

HSP 1 Score: 318.9 bits (816), Expect = 1.3e-83
Identity = 173/197 (87.82%), Postives = 173/197 (87.82%), Query Frame = 0


Query: 1   MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARM 60
           MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARM
Sbjct: 1   MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARM 60

Query: 61  -----------IFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGM 120
                      IFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGM
Sbjct: 61  LLTLDEKNPRRIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGM 120

Query: 121 AKSIHHARVLIRQKHIRVGRQVVNIPSFMVRVDSQ------------SGRPGRVKRKNQK 175
           AKSIHHARVLIRQKHIRVGRQVVNIPSFMVRVDSQ             GRPGRVKRKNQK
Sbjct: 121 AKSIHHARVLIRQKHIRVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVKRKNQK 180

[Close]

BLAST of PI0029046 vs. ExPASy TrEMBL
Match: A0A5D3BMY4 (40S ribosomal protein S9-2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold169G00750 PE=3 SV=1)

HSP 1 Score: 318.9 bits (816), Expect = 1.3e-83
Identity = 173/197 (87.82%), Postives = 173/197 (87.82%), Query Frame = 0


Query: 1   MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARM 60
           MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARM
Sbjct: 1   MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARM 60

Query: 61  -----------IFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGM 120
                      IFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGM
Sbjct: 61  LLTLDEKNPRRIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGM 120

Query: 121 AKSIHHARVLIRQKHIRVGRQVVNIPSFMVRVDSQ------------SGRPGRVKRKNQK 175
           AKSIHHARVLIRQKHIRVGRQVVNIPSFMVRVDSQ             GRPGRVKRKNQK
Sbjct: 121 AKSIHHARVLIRQKHIRVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVKRKNQK 180

[Close]

BLAST of PI0029046 vs. NCBI nr
Match: XP_004135180.1 (40S ribosomal protein S9-2 [Cucumis sativus] >XP_004141548.1 40S ribosomal protein S9-2 [Cucumis sativus] >XP_008446334.1 PREDICTED: 40S ribosomal protein S9-2 [Cucumis melo] >XP_008459594.1 PREDICTED: 40S ribosomal protein S9-2 [Cucumis melo] >XP_022925366.1 40S ribosomal protein S9-2-like [Cucurbita moschata] >XP_022957390.1 40S ribosomal protein S9-2-like [Cucurbita moschata] >XP_022973538.1 40S ribosomal protein S9-2-like [Cucurbita maxima] >XP_022987602.1 40S ribosomal protein S9-2-like [Cucurbita maxima] >XP_023535520.1 40S ribosomal protein S9-2-like [Cucurbita pepo subsp. pepo] >XP_023552855.1 40S ribosomal protein S9-2-like [Cucurbita pepo subsp. pepo] >XP_038891088.1 40S ribosomal protein S9-2-like [Benincasa hispida] >KAA0034405.1 40S ribosomal protein S9-2-like [Cucumis melo var. makuwa] >KAG6592358.1 40S ribosomal protein S9-2, partial [Cucurbita argyrosperma subsp. sororia] >KAA0039283.1 40S ribosomal protein S9-2-like [Cucumis melo var. makuwa] >KAG6601424.1 40S ribosomal protein S9-2, partial [Cucurbita argyrosperma subsp. sororia] >KGN51904.1 hypothetical protein Csa_008331 [Cucumis sativus])

HSP 1 Score: 318.9 bits (816), Expect = 2.7e-83
Identity = 173/197 (87.82%), Postives = 173/197 (87.82%), Query Frame = 0


Query: 1   MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARM 60
           MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARM
Sbjct: 1   MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARM 60

Query: 61  -----------IFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGM 120
                      IFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGM
Sbjct: 61  LLTLDEKNPRRIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGM 120

Query: 121 AKSIHHARVLIRQKHIRVGRQVVNIPSFMVRVDSQ------------SGRPGRVKRKNQK 175
           AKSIHHARVLIRQKHIRVGRQVVNIPSFMVRVDSQ             GRPGRVKRKNQK
Sbjct: 121 AKSIHHARVLIRQKHIRVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVKRKNQK 180

[Close]

BLAST of PI0029046 vs. NCBI nr
Match: XP_010256989.1 (PREDICTED: 40S ribosomal protein S9-2-like [Nelumbo nucifera] >XP_010269850.1 PREDICTED: 40S ribosomal protein S9-2-like [Nelumbo nucifera])

HSP 1 Score: 317.8 bits (813), Expect = 5.9e-83
Identity = 172/197 (87.31%), Postives = 173/197 (87.82%), Query Frame = 0


Query: 1   MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARM 60
           MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARM
Sbjct: 1   MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARM 60

Query: 61  -----------IFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGM 120
                      IFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGM
Sbjct: 61  LLTLDEKNPRRIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGM 120

Query: 121 AKSIHHARVLIRQKHIRVGRQVVNIPSFMVRVDSQ------------SGRPGRVKRKNQK 175
           AKSIHHARVLIRQ+HIRVGRQVVNIPSFMVRVDSQ             GRPGRVKRKNQK
Sbjct: 121 AKSIHHARVLIRQRHIRVGRQVVNIPSFMVRVDSQKHIDFSLTSPLGGGRPGRVKRKNQK 180

[Close]

BLAST of PI0029046 vs. NCBI nr
Match: XP_022944955.1 (40S ribosomal protein S9-2 [Cucurbita moschata] >XP_022968439.1 40S ribosomal protein S9-2 [Cucurbita maxima] >XP_022973398.1 40S ribosomal protein S9-2 [Cucurbita maxima] >XP_023525066.1 40S ribosomal protein S9-2 [Cucurbita pepo subsp. pepo] >XP_023541316.1 40S ribosomal protein S9-2 [Cucurbita pepo subsp. pepo] >KAG6574094.1 40S ribosomal protein S9-2, partial [Cucurbita argyrosperma subsp. sororia] >KAG7013152.1 40S ribosomal protein S9-2 [Cucurbita argyrosperma subsp. argyrosperma] >KAG6607518.1 40S ribosomal protein S9-2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 317.8 bits (813), Expect = 5.9e-83
Identity = 172/197 (87.31%), Postives = 173/197 (87.82%), Query Frame = 0


Query: 1   MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARM 60
           MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARM
Sbjct: 1   MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARM 60

Query: 61  -----------IFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGM 120
                      IFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGM
Sbjct: 61  LLTLDEKNPRRIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGM 120

Query: 121 AKSIHHARVLIRQKHIRVGRQVVNIPSFMVRVDSQ------------SGRPGRVKRKNQK 175
           AKSIHHARVLIRQKHIRVGRQVVNIPSFMVRVDSQ             GRPGRVKR+NQK
Sbjct: 121 AKSIHHARVLIRQKHIRVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVKRRNQK 180

[Close]

BLAST of PI0029046 vs. NCBI nr
Match: XP_022142910.1 (40S ribosomal protein S9-2 [Momordica charantia] >XP_022151237.1 40S ribosomal protein S9-2 [Momordica charantia] >XP_038893425.1 40S ribosomal protein S9-2 [Benincasa hispida])

HSP 1 Score: 317.8 bits (813), Expect = 5.9e-83
Identity = 172/197 (87.31%), Postives = 173/197 (87.82%), Query Frame = 0


Query: 1   MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARM 60
           MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARM
Sbjct: 1   MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARM 60

Query: 61  -----------IFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGM 120
                      IFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGM
Sbjct: 61  LLTLDEKNPRRIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGM 120

Query: 121 AKSIHHARVLIRQKHIRVGRQVVNIPSFMVRVDSQ------------SGRPGRVKRKNQK 175
           AKSIHHARVLIRQ+HIRVGRQVVNIPSFMVRVDSQ             GRPGRVKRKNQK
Sbjct: 121 AKSIHHARVLIRQRHIRVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVKRKNQK 180

[Close]

BLAST of PI0029046 vs. NCBI nr
Match: XP_022957492.1 (40S ribosomal protein S9-2-like [Cucurbita moschata] >XP_022998674.1 40S ribosomal protein S9-2-like [Cucurbita maxima] >XP_023515426.1 40S ribosomal protein S9-2-like [Cucurbita pepo subsp. pepo] >KAG6601653.1 40S ribosomal protein S9-2, partial [Cucurbita argyrosperma subsp. sororia] >KAG7032414.1 40S ribosomal protein S9-2, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 317.4 bits (812), Expect = 7.7e-83
Identity = 172/197 (87.31%), Postives = 173/197 (87.82%), Query Frame = 0


Query: 1   MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARM 60
           MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARM
Sbjct: 1   MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARM 60

Query: 61  -----------IFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGM 120
                      IFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGM
Sbjct: 61  LLTLDEKNPRRIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGM 120

Query: 121 AKSIHHARVLIRQKHIRVGRQVVNIPSFMVRVDSQ------------SGRPGRVKRKNQK 175
           AKSIHHARVLIRQKHIRVGRQVVNIPSFMVRVDSQ             GRPGRVKRKNQK
Sbjct: 121 AKSIHHARVLIRQKHIRVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVKRKNQK 180

[Close]

BLAST of PI0029046 vs. TAIR 10
Match: AT5G39850.1 (Ribosomal protein S4 )

HSP 1 Score: 293.9 bits (751), Expect = 8.5e-80
Identity = 156/197 (79.19%), Postives = 168/197 (85.28%), Query Frame = 0


Query: 1   MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRN---- 60
           MV+V FYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQY LSRIRN    
Sbjct: 1   MVNVRFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYTLSRIRNAARE 60

Query: 61  -------NARMIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGM 120
                  N R IFEGEALLRRMNRYGLLDE+QNKLDYVLALTVENFLERRLQT+VFKSGM
Sbjct: 61  LLTLDEKNPRRIFEGEALLRRMNRYGLLDETQNKLDYVLALTVENFLERRLQTIVFKSGM 120

Query: 121 AKSIHHARVLIRQKHIRVGRQVVNIPSFMVRVDSQ------------SGRPGRVKRKNQK 175
           AKSIHHARVLIRQ+HIRVGRQ+VNIPSFMVRV+SQ             GRPGRVKR+N++
Sbjct: 121 AKSIHHARVLIRQRHIRVGRQLVNIPSFMVRVESQKHVDFSLTSPFGGGRPGRVKRRNER 180

[Close]

BLAST of PI0029046 vs. TAIR 10
Match: AT5G15200.1 (Ribosomal protein S4 )

HSP 1 Score: 277.3 bits (708), Expect = 8.3e-75
Identity = 150/198 (75.76%), Postives = 166/198 (83.84%), Query Frame = 0


Query: 1   MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNA-- 60
           MVHV +YRNYGKTFK PRRPYEKERLD+ELKLVGEYGLR KRELWRVQY+LSRIRN A  
Sbjct: 1   MVHVCYYRNYGKTFKGPRRPYEKERLDSELKLVGEYGLRNKRELWRVQYSLSRIRNAARD 60

Query: 61  ---------RMIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGM 120
                    R IFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQT+VFKSGM
Sbjct: 61  LLTLDEKSPRRIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTIVFKSGM 120

Query: 121 AKSIHHARVLIRQKHIRVGRQVVNIPSFMVRVDSQ------------SGRPGRVKRKNQK 173
           AKSIHH+RVLIRQ+HIRVG+Q+VNIPSFMVR+DSQ             GRPGRVKR+N+K
Sbjct: 121 AKSIHHSRVLIRQRHIRVGKQLVNIPSFMVRLDSQKHIDFALTSPFGGGRPGRVKRRNEK 180

[Close]

BLAST of PI0029046 vs. TAIR 10
Match: AT5G15200.2 (Ribosomal protein S4 )

HSP 1 Score: 221.9 bits (564), Expect = 4.1e-58
Identity = 115/137 (83.94%), Postives = 121/137 (88.32%), Query Frame = 0


Query: 1   MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNA-- 60
           MVHV +YRNYGKTFK PRRPYEKERLD+ELKLVGEYGLR KRELWRVQY+LSRIRN A  
Sbjct: 1   MVHVCYYRNYGKTFKGPRRPYEKERLDSELKLVGEYGLRNKRELWRVQYSLSRIRNAARD 60

Query: 61  ---------RMIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGM 120
                    R IFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQT+VFKSGM
Sbjct: 61  LLTLDEKSPRRIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTIVFKSGM 120

Query: 121 AKSIHHARVLIRQKHIR 127
           AKSIHH+RVLIRQ+HIR
Sbjct: 121 AKSIHHSRVLIRQRHIR 137

The following BLAST results are available for this feature:

BLAST of PI0029046 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FLF0	1.2e-78	79.19	40S ribosomal protein S9-2 OS=Arabidopsis thaliana OX=3702 GN=RPS9C PE=1 SV=1	[more]
Q9LXG1	1.2e-73	75.76	40S ribosomal protein S9-1 OS=Arabidopsis thaliana OX=3702 GN=RPS9B PE=1 SV=1	[more]
P52810	5.6e-52	62.30	40S ribosomal protein S9 OS=Podospora anserina OX=2587412 GN=RPS9 PE=3 SV=1	[more]
P55935	1.1e-50	60.64	40S ribosomal protein S9 OS=Drosophila melanogaster OX=7227 GN=RpS9 PE=1 SV=2	[more]
B4PEU8	1.1e-50	60.64	40S ribosomal protein S9 OS=Drosophila yakuba OX=7245 GN=RpS9 PE=2 SV=1	[more]

BLAST of PI0029046 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JAT4	1.3e-83	87.82	40S ribosomal protein S9-2-like OS=Cucurbita maxima OX=3661 GN=LOC111485110 PE=3...	[more]
A0A0A0KSN1	1.3e-83	87.82	S4 RNA-binding domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G604...	[more]
A0A1S3CA34	1.3e-83	87.82	40S ribosomal protein S9-2 OS=Cucumis melo OX=3656 GN=LOC103498678 PE=3 SV=1	[more]
A0A6J1EC07	1.3e-83	87.82	40S ribosomal protein S9-2-like OS=Cucurbita moschata OX=3662 GN=LOC111432674 PE...	[more]
A0A5D3BMY4	1.3e-83	87.82	40S ribosomal protein S9-2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]

BLAST of PI0029046 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004135180.1	2.7e-83	87.82	40S ribosomal protein S9-2 [Cucumis sativus] >XP_004141548.1 40S ribosomal prote...	[more]
XP_010256989.1	5.9e-83	87.31	PREDICTED: 40S ribosomal protein S9-2-like [Nelumbo nucifera] >XP_010269850.1 PR...	[more]
XP_022944955.1	5.9e-83	87.31	40S ribosomal protein S9-2 [Cucurbita moschata] >XP_022968439.1 40S ribosomal pr...	[more]
XP_022142910.1	5.9e-83	87.31	40S ribosomal protein S9-2 [Momordica charantia] >XP_022151237.1 40S ribosomal p...	[more]
XP_022957492.1	7.7e-83	87.31	40S ribosomal protein S9-2-like [Cucurbita moschata] >XP_022998674.1 40S ribosom...	[more]

BLAST of PI0029046 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G39850.1	8.5e-80	79.19	Ribosomal protein S4	[more]
AT5G15200.1	8.3e-75	75.76	Ribosomal protein S4	[more]
AT5G15200.2	4.1e-58	83.94	Ribosomal protein S4	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002942	RNA-binding S4 domain	SMART	SM00363	s4_6	coord: 98..157 e-value: 1.5E-4 score: 31.2
IPR002942	RNA-binding S4 domain	PFAM	PF01479	S4	coord: 98..141 e-value: 2.7E-13 score: 49.4
IPR002942	RNA-binding S4 domain	CDD	cd00165	S4	coord: 98..142 e-value: 6.65524E-9 score: 48.3998
IPR001912	Ribosomal protein S4/S9, N-terminal	SMART	SM01390	Ribosomal_S4_2	coord: 8..97 e-value: 2.9E-17 score: 73.4
IPR001912	Ribosomal protein S4/S9, N-terminal	PFAM	PF00163	Ribosomal_S4	coord: 15..62 e-value: 2.4E-5 score: 25.1
IPR005710	Ribosomal protein S4/S9, eukaryotic/archaeal	TIGRFAM	TIGR01018	TIGR01018	coord: 11..145 e-value: 5.5E-51 score: 170.7
IPR036986	RNA-binding S4 domain superfamily	GENE3D	3.10.290.10		coord: 97..166 e-value: 1.5E-14 score: 56.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 143..174
None	No IPR available	PANTHER	PTHR11831:SF34	40S RIBOSOMAL PROTEIN S9-2-LIKE	coord: 5..174
None	No IPR available	PROSITE	PS50889	S4	coord: 98..142 score: 10.536595
None	No IPR available	SUPERFAMILY	55174	Alpha-L RNA-binding motif	coord: 12..142
IPR022801	Ribosomal protein S4/S9	PANTHER	PTHR11831	30S 40S RIBOSOMAL PROTEIN	coord: 5..174
IPR018079	Ribosomal protein S4, conserved site	PROSITE	PS00632	RIBOSOMAL_S4	coord: 96..120

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0029046.1	PI0029046.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045903	positive regulation of translational fidelity
biological_process	GO:0006412	translation
cellular_component	GO:0022627	cytosolic small ribosomal subunit
cellular_component	GO:0015935	small ribosomal subunit
molecular_function	GO:0019843	rRNA binding
molecular_function	GO:0003735	structural constituent of ribosome
molecular_function	GO:0003723	RNA binding