PI0028982 (gene) Melon (PI 482460) v1

Overview


Name	PI0028982
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Nucleolar protein 16
Location	chr01: 24859857 .. 24862136 (+)
RNA-Seq Expression	PI0028982
Synteny	PI0028982

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATAAACCCTACGAAATCCCAAATGAGTTCTTCATCTTCCACATACTAAAACCCTAGCCACCAATTTCCTTTTATCCTTCCAATTCACAGAGATGGGAAGGTCTCGAAGAAAGTACAAGAAATCTCGCCCAAAAGTTAAGGTTGGTTTGCCCAAAAGAAACCCTAATGTCTTCAAGCCATCTTTTTGCATGCCGCCTAAGCTCCGCTCCTTGCTCGCCGAACAATTTGAAGAAGGTCCAACATGGGATGAGAAAGGAAGTGTCATTCAAAACTATAAATCCTTCGGTGTTATTTCTAATCCTAATTTGCTCAGTGTTCGTTCCCGCACTGATCACATCGTTGAGAGCGACTCTCTCCAAGTCCCGCCGTCCGATGATCCTGACTCCGTTCTTGATTCTTCCGGTAGTGATGTTGAAGAGGACGGTGAGTATGAGTTTGAATTTGTTTATCTTTCGGTATTGTTTTAAATTTCAGCTGTGTCTCCTCATGAATCTATCTGGGTTTCGTGGAATTTTTGGATTTGAAAGGAACGGGATGGTTTTGAGGGTAGAGAATGTGATGTTTTAAAATATAAAAGTATATTCGTTGGGATGAAATTAGTGGCTTTTAGACATATGGTGCCTTCCTTCTGCTCCAGTTTAGTGAATTGGTCACTTGAAATAGTTTCTGCAATCTGTTAATTCTTTGGTGCTCTTCATCTGAAAGGAGTCGAAGCTTAGCAAAGATTTGAAATTTCTGAATAGCTTTAACTTTAAGAAGTAGCAACTGGCCACTTTCTATCGAACCAAAATTGCATCCAAACTGGTTGGATTTAGTTGGTCATTGATATACTTGGGGAACCTTTTACTGGACCAGGTTATATGAAACGATATAAAAGGTTAAGCTGATGGGTTGCGGTAATTTGATCATATCAATGTTCCATCACTCTCCCTTCACTTGTGATTTGAAAATTTGTAGGTCCATCAAATGAAAATCAATATTACTTGTTGGGAAAATGACATTACAGTTGTAACTCAGAAGTTTAAGCTCATGGGTTATTGTAATTTTACTTATACTAATACTTCAACAAAATAAAATGATGGTTGAGATGATTATAATGTCTTAATTGTCATGATTATGAAGGTTCACGAGGATGTCAAAGCATTTTTTTAGTTGTGCTTCTGATTTGATCTTGTTCTTTCTTTTGTATTCATTAGATTTGAAAACAGCATTGGGAAAGAAGCGCAAAGATGGGAAATCTGCATCTCTACAACCATTGACCACACTTCAGCGTGTTCATGTCGGTAAGCTAATCGAGAAATATGGAGATGATTACCAGGTAAGCTTCAACGTTACTTGCTTTTTAATTCTGAGTAATAGGCTTTGTTTTTTATTTTCCTCATTGAAAATTGCTCTGCAGAGGATGTTTATGGATACAAAGCTGAACTCAATGCAGCATTCTGTCGCCACTCTAGAGAAACTATGCAAAAGATATCACAGTTGTTTAGATAAGAATCCATTGATATTGATTCGTAAACGACGATAGCTCCTTCATCTTTCAAATTGTTTTGTTACAAGAGGTGAAAATCAGATAAGGTATGATCATGAAATTTTATTGAGCAATATTGTTTTGAAACTAAATGTATGAGCCTTAATAGATGAACCATTCTTCCTGCTTCCTGTAGTTTTATTCCTTAAAAAAACTGCTCATAATTTTAATTCATGTTTAGTTGGTGGCATCTAGGGAATTTTTCATTTTAGGGAACCGATGGTGTGTTTGGAATAATTTTGAGAAAAAAATGCTTTCAAAATCAAATTGATTCTTCTATAAACACCTTCCAAAAATTAATAATTTTAAGTGTGGGTAGTATAGGTTATGGAGTGATTTTAGATTAAGAAAAGTGGTTTTTTTTAAAAAAAAATCTTAATAAATAAGTAGTTCAAGCGATATGAATGACGTACTAAGTACGGTTATTTTTGTATAAAGTAGGTGTACTTTTGTAAGTTTCATATCATTTTGGTATAAAAAATTCTTTGGACAATCTTTCCTAGATGGATTGCTCTAAAAATGTCCTAAAAATTTAAATTGTTTAGTAGAAAATCCTCAAAATACGTTTTAAGAAATAGAGATATATTTTATAATTCATAGAATCTATTGTAATATCAACTTAACAAATTTGCCATTGAAAATATAAGATATAATTACAAGATATAATTACGATTTTATTTATTTTTGAAGTTGTTAAACTAGACTTTATTTGAAAGGACAATTGTTTTTAGATGACAAAACAGTTGAAAATGC

mRNA sequence

ATAAACCCTACGAAATCCCAAATGAGTTCTTCATCTTCCACATACTAAAACCCTAGCCACCAATTTCCTTTTATCCTTCCAATTCACAGAGATGGGAAGGTCTCGAAGAAAGTACAAGAAATCTCGCCCAAAAGTTAAGGTTGGTTTGCCCAAAAGAAACCCTAATGTCTTCAAGCCATCTTTTTGCATGCCGCCTAAGCTCCGCTCCTTGCTCGCCGAACAATTTGAAGAAGGTCCAACATGGGATGAGAAAGGAAGTGTCATTCAAAACTATAAATCCTTCGGTGTTATTTCTAATCCTAATTTGCTCAGTGTTCGTTCCCGCACTGATCACATCGTTGAGAGCGACTCTCTCCAAGTCCCGCCGTCCGATGATCCTGACTCCGTTCTTGATTCTTCCGGTAGTGATGTTGAAGAGGACGATTTGAAAACAGCATTGGGAAAGAAGCGCAAAGATGGGAAATCTGCATCTCTACAACCATTGACCACACTTCAGCGTGTTCATGTCGGTAAGCTAATCGAGAAATATGGAGATGATTACCAGAGGATGTTTATGGATACAAAGCTGAACTCAATGCAGCATTCTGTCGCCACTCTAGAGAAACTATGCAAAAGATATCACAGTTGTTTAGATAAGAATCCATTGATATTGATTCGTAAACGACGATAGCTCCTTCATCTTTCAAATTGTTTTGTTACAAGAGGTGAAAATCAGATAAGGTATGATCATGAAATTTTATTGAGCAATATTGTTTTGAAACTAAATGTATGAGCCTTAATAGATGAACCATTCTTCCTGCTTCCTGTAGTTTTATTCCTTAAAAAAACTGCTCATAATTTTAATTCATGTTTAGTTGGTGGCATCTAGGGAATTTTTCATTTTAGGGAACCGATGGTGTGTTTGGAATAATTTTGAGAAAAAAATGCTTTCAAAATCAAATTGATTCTTCTATAAACACCTTCCAAAAATTAATAATTTTAAGTGTGGGTAGTATAGGTTATGGAGTGATTTTAGATTAAGAAAAGTGGTTTTTTTTAAAAAAAAATCTTAATAAATAAGTAGTTCAAGCGATATGAATGACGTACTAAGTACGGTTATTTTTGTATAAAGTAGGTGTACTTTTGTAAGTTTCATATCATTTTGGTATAAAAAATTCTTTGGACAATCTTTCCTAGATGGATTGCTCTAAAAATGTCCTAAAAATTTAAATTGTTTAGTAGAAAATCCTCAAAATACGTTTTAAGAAATAGAGATATATTTTATAATTCATAGAATCTATTGTAATATCAACTTAACAAATTTGCCATTGAAAATATAAGATATAATTACAAGATATAATTACGATTTTATTTATTTTTGAAGTTGTTAAACTAGACTTTATTTGAAAGGACAATTGTTTTTAGATGACAAAACAGTTGAAAATGC

Coding sequence (CDS)

ATGGGAAGGTCTCGAAGAAAGTACAAGAAATCTCGCCCAAAAGTTAAGGTTGGTTTGCCCAAAAGAAACCCTAATGTCTTCAAGCCATCTTTTTGCATGCCGCCTAAGCTCCGCTCCTTGCTCGCCGAACAATTTGAAGAAGGTCCAACATGGGATGAGAAAGGAAGTGTCATTCAAAACTATAAATCCTTCGGTGTTATTTCTAATCCTAATTTGCTCAGTGTTCGTTCCCGCACTGATCACATCGTTGAGAGCGACTCTCTCCAAGTCCCGCCGTCCGATGATCCTGACTCCGTTCTTGATTCTTCCGGTAGTGATGTTGAAGAGGACGATTTGAAAACAGCATTGGGAAAGAAGCGCAAAGATGGGAAATCTGCATCTCTACAACCATTGACCACACTTCAGCGTGTTCATGTCGGTAAGCTAATCGAGAAATATGGAGATGATTACCAGAGGATGTTTATGGATACAAAGCTGAACTCAATGCAGCATTCTGTCGCCACTCTAGAGAAACTATGCAAAAGATATCACAGTTGTTTAGATAAGAATCCATTGATATTGATTCGTAAACGACGATAG

Protein sequence

MGRSRRKYKKSRPKVKVGLPKRNPNVFKPSFCMPPKLRSLLAEQFEEGPTWDEKGSVIQNYKSFGVISNPNLLSVRSRTDHIVESDSLQVPPSDDPDSVLDSSGSDVEEDDLKTALGKKRKDGKSASLQPLTTLQRVHVGKLIEKYGDDYQRMFMDTKLNSMQHSVATLEKLCKRYHSCLDKNPLILIRKRR

Homology

[Close]

BLAST of PI0028982 vs. ExPASy TrEMBL
Match: A0A5A7VLA5 (Nucleolar protein 16 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold411G00570 PE=3 SV=1)

HSP 1 Score: 371.3 bits (952), Expect = 2.4e-99
Identity = 187/190 (98.42%), Postives = 187/190 (98.42%), Query Frame = 0


Query: 1   MGRSRRKYKKSRPKVKVGLPKRNPNVFKPSFCMPPKLRSLLAEQFEEGPTWDEKGSVIQN 60
           MGRSRRKYKKSRPKVKVGLPKRNPNVFKPSFCMPPKLRSLLAEQFEE PTWDEKGSVIQN
Sbjct: 1   MGRSRRKYKKSRPKVKVGLPKRNPNVFKPSFCMPPKLRSLLAEQFEEDPTWDEKGSVIQN 60

Query: 61  YKSFGVISNPNLLSVRSRTDHIVESDSLQVPPSDDPDSVLDSSGSDVEEDDLKTALGKKR 120
           YKSFGVISNPNLLSVRSRTDHIVESDSLQVPPSDDPDSVLDSSGSDVEEDDLKTALGKKR
Sbjct: 61  YKSFGVISNPNLLSVRSRTDHIVESDSLQVPPSDDPDSVLDSSGSDVEEDDLKTALGKKR 120

Query: 121 KDGKSASLQPLTTLQRVHVGKLIEKYGDDYQRMFMDTKLNSMQHSVATLEKLCKRYHSCL 180
           KDGKSA LQPLTTLQRVHVGKLIEKYGDDYQRMFMDTKLNSMQHSVATLEKLCKRYHSCL
Sbjct: 121 KDGKSAPLQPLTTLQRVHVGKLIEKYGDDYQRMFMDTKLNSMQHSVATLEKLCKRYHSCL 180

Query: 181 DKNPLILIRK 191
           DKNPLIL RK
Sbjct: 181 DKNPLILTRK 190

[Close]

BLAST of PI0028982 vs. ExPASy TrEMBL
Match: A0A1S3BSM4 (Nucleolar protein 16 OS=Cucumis melo OX=3656 GN=LOC103492822 PE=3 SV=1)

HSP 1 Score: 371.3 bits (952), Expect = 2.4e-99
Identity = 187/190 (98.42%), Postives = 187/190 (98.42%), Query Frame = 0


Query: 1   MGRSRRKYKKSRPKVKVGLPKRNPNVFKPSFCMPPKLRSLLAEQFEEGPTWDEKGSVIQN 60
           MGRSRRKYKKSRPKVKVGLPKRNPNVFKPSFCMPPKLRSLLAEQFEE PTWDEKGSVIQN
Sbjct: 1   MGRSRRKYKKSRPKVKVGLPKRNPNVFKPSFCMPPKLRSLLAEQFEEDPTWDEKGSVIQN 60

Query: 61  YKSFGVISNPNLLSVRSRTDHIVESDSLQVPPSDDPDSVLDSSGSDVEEDDLKTALGKKR 120
           YKSFGVISNPNLLSVRSRTDHIVESDSLQVPPSDDPDSVLDSSGSDVEEDDLKTALGKKR
Sbjct: 61  YKSFGVISNPNLLSVRSRTDHIVESDSLQVPPSDDPDSVLDSSGSDVEEDDLKTALGKKR 120

Query: 121 KDGKSASLQPLTTLQRVHVGKLIEKYGDDYQRMFMDTKLNSMQHSVATLEKLCKRYHSCL 180
           KDGKSA LQPLTTLQRVHVGKLIEKYGDDYQRMFMDTKLNSMQHSVATLEKLCKRYHSCL
Sbjct: 121 KDGKSAPLQPLTTLQRVHVGKLIEKYGDDYQRMFMDTKLNSMQHSVATLEKLCKRYHSCL 180

Query: 181 DKNPLILIRK 191
           DKNPLIL RK
Sbjct: 181 DKNPLILTRK 190

[Close]

BLAST of PI0028982 vs. ExPASy TrEMBL
Match: A0A0A0KAV9 (Nucleolar protein 16 OS=Cucumis sativus OX=3659 GN=Csa_7G396460 PE=3 SV=1)

HSP 1 Score: 368.6 bits (945), Expect = 1.6e-98
Identity = 186/192 (96.88%), Postives = 188/192 (97.92%), Query Frame = 0


Query: 1   MGRSRRKYKKSRPKVKVGLPKRNPNVFKPSFCMPPKLRSLLAEQFEEGPTWDEKGSVIQN 60
           MGRSRRKYKKSRPKVKVGLPKRNPNVFKPSFCMPPKLRSLLAEQFEE PTWDEKGSVIQN
Sbjct: 1   MGRSRRKYKKSRPKVKVGLPKRNPNVFKPSFCMPPKLRSLLAEQFEEDPTWDEKGSVIQN 60

Query: 61  YKSFGVISNPNLLSVRSRTDHIVESDSLQVPPSDDPDSVLDSSGSDVEEDDLKTALGKKR 120
           YKSFGVISNPNLLSVRSRTDHIVESDSLQVPPSDDPD+VLDSSGSDVEEDDLKTALGKKR
Sbjct: 61  YKSFGVISNPNLLSVRSRTDHIVESDSLQVPPSDDPDTVLDSSGSDVEEDDLKTALGKKR 120

Query: 121 KDGKSASLQPLTTLQRVHVGKLIEKYGDDYQRMFMDTKLNSMQHSVATLEKLCKRYHSCL 180
           KDGKSA LQPLTTLQRVHVGKLIEKYGDDYQRMFMDTKLNSMQHSVATLEKLCKRY+SCL
Sbjct: 121 KDGKSAPLQPLTTLQRVHVGKLIEKYGDDYQRMFMDTKLNSMQHSVATLEKLCKRYNSCL 180

Query: 181 DKNPLILIRKRR 193
           D NPLIL RKRR
Sbjct: 181 DSNPLILTRKRR 192

[Close]

BLAST of PI0028982 vs. ExPASy TrEMBL
Match: A0A6J1JMQ4 (Nucleolar protein 16 OS=Cucurbita maxima OX=3661 GN=LOC111488281 PE=3 SV=1)

HSP 1 Score: 344.7 bits (883), Expect = 2.4e-91
Identity = 174/193 (90.16%), Postives = 182/193 (94.30%), Query Frame = 0


Query: 1   MGRSRRKYKKSRPKVKVGLPKRNPNVFKPSFCMPPKLRSLLAEQFEEGPTWDEKGSVIQN 60
           MGRSRRKYK+SR KV+VGLPKRNPNVFKPSFCMPPKLRSLLAEQFEE P WDEK SVI N
Sbjct: 1   MGRSRRKYKRSRAKVQVGLPKRNPNVFKPSFCMPPKLRSLLAEQFEEDPAWDEKASVIHN 60

Query: 61  YKSFGVISNPNLLSVRSRTDHIVESDSLQV----PPSDDPDSVLDSSGSDVEEDDLKTAL 120
           YKSFGV+SNPNLLSVRSRTDHIVESDSLQV    PPSDDPDSVLDSSGSDVEEDDLKTAL
Sbjct: 61  YKSFGVLSNPNLLSVRSRTDHIVESDSLQVPPSLPPSDDPDSVLDSSGSDVEEDDLKTAL 120

Query: 121 GKKRKDGKSASLQPLTTLQRVHVGKLIEKYGDDYQRMFMDTKLNSMQHSVATLEKLCKRY 180
           GKKRKDGKSA L+PLTT+QRVHVG+LIEKYGDD++RMFMDTKLNSMQHSVATLEKLCKRY
Sbjct: 121 GKKRKDGKSAPLKPLTTIQRVHVGRLIEKYGDDHERMFMDTKLNSMQHSVATLEKLCKRY 180

Query: 181 HSCLDKNPLILIR 190
           HSCLDKNPLIL R
Sbjct: 181 HSCLDKNPLILTR 193

[Close]

BLAST of PI0028982 vs. ExPASy TrEMBL
Match: A0A6J1GRW5 (Nucleolar protein 16 OS=Cucurbita moschata OX=3662 GN=LOC111456462 PE=3 SV=1)

HSP 1 Score: 341.3 bits (874), Expect = 2.7e-90
Identity = 172/193 (89.12%), Postives = 181/193 (93.78%), Query Frame = 0


Query: 1   MGRSRRKYKKSRPKVKVGLPKRNPNVFKPSFCMPPKLRSLLAEQFEEGPTWDEKGSVIQN 60
           MGRSRRKYK+SR KV+VGLPKRNPNVFKPSFCMPPKLRSLLAEQFEE P WDEK SVI N
Sbjct: 1   MGRSRRKYKRSRAKVQVGLPKRNPNVFKPSFCMPPKLRSLLAEQFEEDPAWDEKASVIHN 60

Query: 61  YKSFGVISNPNLLSVRSRTDHIVESDSLQV----PPSDDPDSVLDSSGSDVEEDDLKTAL 120
           YKSFGV+SNPNLLSVRSRTDHIVESD LQV    PPSDDPDSVLDSSGSDVEEDDLKTAL
Sbjct: 61  YKSFGVLSNPNLLSVRSRTDHIVESDFLQVPPSLPPSDDPDSVLDSSGSDVEEDDLKTAL 120

Query: 121 GKKRKDGKSASLQPLTTLQRVHVGKLIEKYGDDYQRMFMDTKLNSMQHSVATLEKLCKRY 180
           GKKR+DGKSA L+PLTT+QRVHVG+LIEKYGDD++RMFMDTKLNSMQHSVATLEKLCKRY
Sbjct: 121 GKKRRDGKSAPLKPLTTIQRVHVGRLIEKYGDDHERMFMDTKLNSMQHSVATLEKLCKRY 180

Query: 181 HSCLDKNPLILIR 190
           HSCLDKNPLIL R
Sbjct: 181 HSCLDKNPLILTR 193

[Close]

BLAST of PI0028982 vs. NCBI nr
Match: XP_008451586.1 (PREDICTED: uncharacterized protein LOC103492822 [Cucumis melo] >KAA0068000.1 nucleolar protein 16-like [Cucumis melo var. makuwa] >TYK18127.1 nucleolar protein 16-like [Cucumis melo var. makuwa])

HSP 1 Score: 371.3 bits (952), Expect = 5.0e-99
Identity = 187/190 (98.42%), Postives = 187/190 (98.42%), Query Frame = 0


Query: 1   MGRSRRKYKKSRPKVKVGLPKRNPNVFKPSFCMPPKLRSLLAEQFEEGPTWDEKGSVIQN 60
           MGRSRRKYKKSRPKVKVGLPKRNPNVFKPSFCMPPKLRSLLAEQFEE PTWDEKGSVIQN
Sbjct: 1   MGRSRRKYKKSRPKVKVGLPKRNPNVFKPSFCMPPKLRSLLAEQFEEDPTWDEKGSVIQN 60

Query: 61  YKSFGVISNPNLLSVRSRTDHIVESDSLQVPPSDDPDSVLDSSGSDVEEDDLKTALGKKR 120
           YKSFGVISNPNLLSVRSRTDHIVESDSLQVPPSDDPDSVLDSSGSDVEEDDLKTALGKKR
Sbjct: 61  YKSFGVISNPNLLSVRSRTDHIVESDSLQVPPSDDPDSVLDSSGSDVEEDDLKTALGKKR 120

Query: 121 KDGKSASLQPLTTLQRVHVGKLIEKYGDDYQRMFMDTKLNSMQHSVATLEKLCKRYHSCL 180
           KDGKSA LQPLTTLQRVHVGKLIEKYGDDYQRMFMDTKLNSMQHSVATLEKLCKRYHSCL
Sbjct: 121 KDGKSAPLQPLTTLQRVHVGKLIEKYGDDYQRMFMDTKLNSMQHSVATLEKLCKRYHSCL 180

Query: 181 DKNPLILIRK 191
           DKNPLIL RK
Sbjct: 181 DKNPLILTRK 190

[Close]

BLAST of PI0028982 vs. NCBI nr
Match: XP_004136032.1 (uncharacterized protein LOC101209910 [Cucumis sativus] >KGN44931.1 hypothetical protein Csa_016440 [Cucumis sativus])

HSP 1 Score: 368.6 bits (945), Expect = 3.2e-98
Identity = 186/192 (96.88%), Postives = 188/192 (97.92%), Query Frame = 0


Query: 1   MGRSRRKYKKSRPKVKVGLPKRNPNVFKPSFCMPPKLRSLLAEQFEEGPTWDEKGSVIQN 60
           MGRSRRKYKKSRPKVKVGLPKRNPNVFKPSFCMPPKLRSLLAEQFEE PTWDEKGSVIQN
Sbjct: 1   MGRSRRKYKKSRPKVKVGLPKRNPNVFKPSFCMPPKLRSLLAEQFEEDPTWDEKGSVIQN 60

Query: 61  YKSFGVISNPNLLSVRSRTDHIVESDSLQVPPSDDPDSVLDSSGSDVEEDDLKTALGKKR 120
           YKSFGVISNPNLLSVRSRTDHIVESDSLQVPPSDDPD+VLDSSGSDVEEDDLKTALGKKR
Sbjct: 61  YKSFGVISNPNLLSVRSRTDHIVESDSLQVPPSDDPDTVLDSSGSDVEEDDLKTALGKKR 120

Query: 121 KDGKSASLQPLTTLQRVHVGKLIEKYGDDYQRMFMDTKLNSMQHSVATLEKLCKRYHSCL 180
           KDGKSA LQPLTTLQRVHVGKLIEKYGDDYQRMFMDTKLNSMQHSVATLEKLCKRY+SCL
Sbjct: 121 KDGKSAPLQPLTTLQRVHVGKLIEKYGDDYQRMFMDTKLNSMQHSVATLEKLCKRYNSCL 180

Query: 181 DKNPLILIRKRR 193
           D NPLIL RKRR
Sbjct: 181 DSNPLILTRKRR 192

[Close]

BLAST of PI0028982 vs. NCBI nr
Match: XP_038898931.1 (nucleolar protein 16 [Benincasa hispida])

HSP 1 Score: 352.8 bits (904), Expect = 1.8e-93
Identity = 178/195 (91.28%), Postives = 186/195 (95.38%), Query Frame = 0


Query: 1   MGRSRRKYKKSRPKVKVGLPKRNPNVFKPSFCMPPKLRSLLAEQFEEGPTWDEKGSVIQN 60
           MGRSRRKYK+SRPKVKVGLPKR+PNVFKPSFCMPPKLRSLLAEQFEE PTWD+K  VI N
Sbjct: 1   MGRSRRKYKRSRPKVKVGLPKRHPNVFKPSFCMPPKLRSLLAEQFEEDPTWDDKARVIHN 60

Query: 61  YKSFGVISNPNLLSVRSRTDHIVESDSLQV----PPSDDPDSVLDSSGSDVEEDDLKTAL 120
           YKSFGVISNPNLLSVRSRTDHIVESDSLQV    PPSD+PDSVLDSSGSDVEEDDLKTAL
Sbjct: 61  YKSFGVISNPNLLSVRSRTDHIVESDSLQVPPSQPPSDEPDSVLDSSGSDVEEDDLKTAL 120

Query: 121 GKKRKDGKSASLQPLTTLQRVHVGKLIEKYGDDYQRMFMDTKLNSMQHSVATLEKLCKRY 180
           GKKRKDGKSA LQPLTT+QRVHVG+LIEKYGDDY+RMFMDTKLNSMQHSVATLEKLCKRY
Sbjct: 121 GKKRKDGKSAPLQPLTTIQRVHVGRLIEKYGDDYERMFMDTKLNSMQHSVATLEKLCKRY 180

Query: 181 HSCLDKNPLILIRKR 192
           HSCLDKNPLILIRK+
Sbjct: 181 HSCLDKNPLILIRKK 195

[Close]

BLAST of PI0028982 vs. NCBI nr
Match: XP_022991747.1 (uncharacterized protein LOC111488281 [Cucurbita maxima])

HSP 1 Score: 344.7 bits (883), Expect = 5.0e-91
Identity = 174/193 (90.16%), Postives = 182/193 (94.30%), Query Frame = 0


Query: 1   MGRSRRKYKKSRPKVKVGLPKRNPNVFKPSFCMPPKLRSLLAEQFEEGPTWDEKGSVIQN 60
           MGRSRRKYK+SR KV+VGLPKRNPNVFKPSFCMPPKLRSLLAEQFEE P WDEK SVI N
Sbjct: 1   MGRSRRKYKRSRAKVQVGLPKRNPNVFKPSFCMPPKLRSLLAEQFEEDPAWDEKASVIHN 60

Query: 61  YKSFGVISNPNLLSVRSRTDHIVESDSLQV----PPSDDPDSVLDSSGSDVEEDDLKTAL 120
           YKSFGV+SNPNLLSVRSRTDHIVESDSLQV    PPSDDPDSVLDSSGSDVEEDDLKTAL
Sbjct: 61  YKSFGVLSNPNLLSVRSRTDHIVESDSLQVPPSLPPSDDPDSVLDSSGSDVEEDDLKTAL 120

Query: 121 GKKRKDGKSASLQPLTTLQRVHVGKLIEKYGDDYQRMFMDTKLNSMQHSVATLEKLCKRY 180
           GKKRKDGKSA L+PLTT+QRVHVG+LIEKYGDD++RMFMDTKLNSMQHSVATLEKLCKRY
Sbjct: 121 GKKRKDGKSAPLKPLTTIQRVHVGRLIEKYGDDHERMFMDTKLNSMQHSVATLEKLCKRY 180

Query: 181 HSCLDKNPLILIR 190
           HSCLDKNPLIL R
Sbjct: 181 HSCLDKNPLILTR 193

[Close]

BLAST of PI0028982 vs. NCBI nr
Match: XP_023547523.1 (uncharacterized protein LOC111806441 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 342.8 bits (878), Expect = 1.9e-90
Identity = 173/193 (89.64%), Postives = 181/193 (93.78%), Query Frame = 0


Query: 1   MGRSRRKYKKSRPKVKVGLPKRNPNVFKPSFCMPPKLRSLLAEQFEEGPTWDEKGSVIQN 60
           MGRSRRKYK+SR KV+VGLPKRNPNVFKPSFCMPPKLRSLLAEQFEE P WDEK SVI N
Sbjct: 1   MGRSRRKYKRSRAKVQVGLPKRNPNVFKPSFCMPPKLRSLLAEQFEEDPAWDEKASVIHN 60

Query: 61  YKSFGVISNPNLLSVRSRTDHIVESDSLQV----PPSDDPDSVLDSSGSDVEEDDLKTAL 120
           YKSFGV+SNPNLLSVRSRTDHIVESDSLQV    PPSDDPDSVLDSSGSDVEEDDLKTAL
Sbjct: 61  YKSFGVLSNPNLLSVRSRTDHIVESDSLQVPPSLPPSDDPDSVLDSSGSDVEEDDLKTAL 120

Query: 121 GKKRKDGKSASLQPLTTLQRVHVGKLIEKYGDDYQRMFMDTKLNSMQHSVATLEKLCKRY 180
           GKKRKDGKSA L+PLTT+QRVHVG+LIEKYGDD++RMFMDTKLNSMQHSVATLEKLCKRY
Sbjct: 121 GKKRKDGKSAPLKPLTTIQRVHVGRLIEKYGDDHERMFMDTKLNSMQHSVATLEKLCKRY 180

Query: 181 HSCLDKNPLILIR 190
           H CLDKNPLIL R
Sbjct: 181 HCCLDKNPLILTR 193

[Close]

BLAST of PI0028982 vs. TAIR 10
Match: AT1G02870.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosome biogenesis protein Nop16 (InterPro:IPR019002); Has 104 Blast hits to 104 proteins in 57 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 63; Plants - 35; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). )

HSP 1 Score: 240.7 bits (613), Expect = 9.5e-64
Identity = 122/195 (62.56%), Postives = 153/195 (78.46%), Query Frame = 0


Query: 1   MGRSRRKYKKSRPKVKVGLPKRNPNVFKPSFCMPPKLRSLLAEQFEEGPTWDEKGSVIQN 60
           M RSRRKY+ SR KV+V LPK+NPN+FKP+F  PPKLR+L+    ++ P WD++ SVIQN
Sbjct: 1   MARSRRKYRNSRAKVRVALPKKNPNIFKPAFNFPPKLRALMG---DDVPEWDDQASVIQN 60

Query: 61  YKSFGVISNPNLLSVRSRTDHIVESDSLQV-----PPSDDP---DSVLDSSGSDVEEDDL 120
           YKSFGVISNPNLL +R+RTDH+++ DSL V     PP+DDP   +     SGS++EEDDL
Sbjct: 61  YKSFGVISNPNLLGIRARTDHMIQDDSLNVPPPVEPPTDDPIAKEFEPIDSGSELEEDDL 120

Query: 121 KTALGKKRKDGKSASLQPLTTLQRVHVGKLIEKYGDDYQRMFMDTKLNSMQHSVATLEKL 180
           KTALGK+RKDGKSA LQPLTT+QR H+ +L+EK+GDD + M+ D KLNSMQHSVATL KL
Sbjct: 121 KTALGKQRKDGKSAPLQPLTTMQRTHIRRLVEKHGDDIEGMYRDRKLNSMQHSVATLRKL 180

Query: 181 CKRYHSCLDKNPLIL 188
           C RY    DKNP+++
Sbjct: 181 CTRYQIYKDKNPILV 192

The following BLAST results are available for this feature:

BLAST of PI0028982 vs.


Match Name	E-value	Identity	Description

BLAST of PI0028982 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7VLA5	2.4e-99	98.42	Nucleolar protein 16 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold411...	[more]
A0A1S3BSM4	2.4e-99	98.42	Nucleolar protein 16 OS=Cucumis melo OX=3656 GN=LOC103492822 PE=3 SV=1	[more]
A0A0A0KAV9	1.6e-98	96.88	Nucleolar protein 16 OS=Cucumis sativus OX=3659 GN=Csa_7G396460 PE=3 SV=1	[more]
A0A6J1JMQ4	2.4e-91	90.16	Nucleolar protein 16 OS=Cucurbita maxima OX=3661 GN=LOC111488281 PE=3 SV=1	[more]
A0A6J1GRW5	2.7e-90	89.12	Nucleolar protein 16 OS=Cucurbita moschata OX=3662 GN=LOC111456462 PE=3 SV=1	[more]

BLAST of PI0028982 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008451586.1	5.0e-99	98.42	PREDICTED: uncharacterized protein LOC103492822 [Cucumis melo] >KAA0068000.1 nuc...	[more]
XP_004136032.1	3.2e-98	96.88	uncharacterized protein LOC101209910 [Cucumis sativus] >KGN44931.1 hypothetical ...	[more]
XP_038898931.1	1.8e-93	91.28	nucleolar protein 16 [Benincasa hispida]	[more]
XP_022991747.1	5.0e-91	90.16	uncharacterized protein LOC111488281 [Cucurbita maxima]	[more]
XP_023547523.1	1.9e-90	89.64	uncharacterized protein LOC111806441 [Cucurbita pepo subsp. pepo]	[more]

BLAST of PI0028982 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G02870.1	9.5e-64	62.56	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR019002	Ribosome biogenesis protein Nop16	PFAM	PF09420	Nop16	coord: 3..78 e-value: 1.1E-6 score: 28.8 coord: 107..177 e-value: 2.0E-17 score: 64.0
IPR019002	Ribosome biogenesis protein Nop16	PANTHER	PTHR13243	HSPC111 PROTEIN-RELATED	coord: 1..179
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 106..125
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..26
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..17
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 86..127

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0028982.1	PI0028982.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0042273	ribosomal large subunit biogenesis
cellular_component	GO:0005730	nucleolus