PI0028979 (gene) Melon (PI 482460) v1

Overview


Name	PI0028979
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Proteinase inhibitor-like
Location	chr02: 12541791 .. 12542890 (-)
RNA-Seq Expression	PI0028979
Synteny	PI0028979

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTAGAAGTAGTTGGAAAAAGTGGAGGAGAAGCCAAAGAATAATAATAAATGACGCACCTTTTGTGACACCTGTTTTTATTAAAGCGAGGCAGGGTCGACTCACCGACTTTTGTTGCAATCGTGTTTATGTTGTGCTTGATCCAAGGGGAAATGTCGTCGATGCTCCATACATTGGTTAAAACTTTGAAGCAAAAGTTTGATGTTATATTTTCATTACACAATTGTACTCAAATGTTGTACCACCACACATTGTTGAACTTGAATAAAGTCTTTATCTATTGACTATCAACTACGAATGTTATTATTTGTTAGTTTCGTCATATGTAATGCCCACATTTTGTTAGGAATTCTGTATAAGGTAAGTTGTTTAAAAGAAAGGAAAAGGTTAAGAAAATAAATTTATAATATAATGTAATATAATAATAATAATAAAGTTATTATTATTATTATAATTATTATTAAATTATTTCTTTTTCTCTTCTTCGTTAAGTGTGCACGCAAAAAAAAACCCTAACAACTTCTTCTTCTTCGTTCGTGTAGGCTGCATTCCTCATCGCCATCCCCAGCCACAGTCGTTTACCTTCGTCCGTTCGTCGTCGTTGCACCTCATCCACAAGCCGTCACGCAAAGCCATCGCACGAAGAGTCATCAAACGCGAAGCTGCTCGCCAAGACGTCCGATCCTCGCTTCACTTTGCACCGTCCGATTTCGTCCAGATCTCTCCGTCCAGTCGAGTTTTGCGTCGTGCTCTCCTTCTCCGTCCAGCCGGCGTTCGTCCGTTCAGATCCACGCGAATCCGAGCCGAAGTCCTTCGCCTGAGCCGCTTGGTTCTGTACTCCCTTTCTAGCCACGAACCCAAGCCTCCTGGGTTCTATTTGAGCTGATTCCAGCTGGCGCTGAACCTTTTTCCTAGCCTTCAAGCCATTGTTGGTAAGCTATCGTGAGTTTTAGCATTGTTGGTTCGAGGAACTAATCTTGGATTAGTTTGGATTAAATTTGTTTTGGATTGAAGTTCATTGTTCTTGTTGAAGGTGCCGTTGAAGATAATCGCTTAAGCTCTTGGAGTAATAGACATATTTGGCTTTTGGAGAAGTAG

mRNA sequence

ATGGCTAGAAGTAGTTGGAAAAAGTGGAGGAGAAGCCAAAGAATAATAATAAATGACGCACCTTTTGTGACACCTGTTTTTATTAAAGCGAGGCAGGGTCGACTCACCGACTTTTGTTGCAATCGTGTTTATGTTGTGCTTGATCCAAGGGGAAATGTCGTCGATGCTCCATACATTGGCTGCATTCCTCATCGCCATCCCCAGCCACAGTCGTTTACCTTCGTCCGTTCGTCGTCGTTGCACCTCATCCACAAGCCGTCACGCAAAGCCATCGCACGAAGAGTCATCAAACGCGAAGCTGCTCGCCAAGACGTCCGATCCTCGCTTCACTTTGCACCGTCCGATTTCGTCCAGATCTCTCCGTCCAGTCGAGTTTTGCGTCGTGCTCTCCTTCTCCGTCCAGCCGGCGTTCGTCCGTTCAGATCCACGCGAATCCGAGCCGAACTGGCGCTGAACCTTTTTCCTAGCCTTCAAGCCATTGTTGGTGCCGTTGAAGATAATCGCTTAAGCTCTTGGAGTAATAGACATATTTGGCTTTTGGAGAAGTAG

Coding sequence (CDS)

ATGGCTAGAAGTAGTTGGAAAAAGTGGAGGAGAAGCCAAAGAATAATAATAAATGACGCACCTTTTGTGACACCTGTTTTTATTAAAGCGAGGCAGGGTCGACTCACCGACTTTTGTTGCAATCGTGTTTATGTTGTGCTTGATCCAAGGGGAAATGTCGTCGATGCTCCATACATTGGCTGCATTCCTCATCGCCATCCCCAGCCACAGTCGTTTACCTTCGTCCGTTCGTCGTCGTTGCACCTCATCCACAAGCCGTCACGCAAAGCCATCGCACGAAGAGTCATCAAACGCGAAGCTGCTCGCCAAGACGTCCGATCCTCGCTTCACTTTGCACCGTCCGATTTCGTCCAGATCTCTCCGTCCAGTCGAGTTTTGCGTCGTGCTCTCCTTCTCCGTCCAGCCGGCGTTCGTCCGTTCAGATCCACGCGAATCCGAGCCGAACTGGCGCTGAACCTTTTTCCTAGCCTTCAAGCCATTGTTGGTGCCGTTGAAGATAATCGCTTAAGCTCTTGGAGTAATAGACATATTTGGCTTTTGGAGAAGTAG

Protein sequence

MARSSWKKWRRSQRIIINDAPFVTPVFIKARQGRLTDFCCNRVYVVLDPRGNVVDAPYIGCIPHRHPQPQSFTFVRSSSLHLIHKPSRKAIARRVIKREAARQDVRSSLHFAPSDFVQISPSSRVLRRALLLRPAGVRPFRSTRIRAELALNLFPSLQAIVGAVEDNRLSSWSNRHIWLLEK

Homology

[Close]

BLAST of PI0028979 vs. ExPASy TrEMBL
Match: A0A5D3DF00 (Proteinase inhibitor-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold543G00060 PE=3 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 6.6e-06
Identity = 28/45 (62.22%), Postives = 32/45 (71.11%), Query Frame = 0


Query: 16 IINDAPFVTPVFIKARQGRLTDFCCNRVYVVLDPRGNVVDAPYIG 61
          I  DAPFVT VFI+  Q  L +FCCNRV VVLDP G V + P+IG
Sbjct: 49 INKDAPFVTVVFIRPGQVALPNFCCNRVNVVLDPSGKVSNIPFIG 93

[Close]

BLAST of PI0028979 vs. ExPASy TrEMBL
Match: A0A5A7SX46 (Proteinase inhibitor-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold57G002800 PE=3 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 6.6e-06
Identity = 28/45 (62.22%), Postives = 32/45 (71.11%), Query Frame = 0


Query: 16 IINDAPFVTPVFIKARQGRLTDFCCNRVYVVLDPRGNVVDAPYIG 61
          I  DAPFVT VFI+  Q  L +FCCNRV VVLDP G V + P+IG
Sbjct: 49 INKDAPFVTVVFIRPGQVALPNFCCNRVNVVLDPSGKVSNIPFIG 93

[Close]

BLAST of PI0028979 vs. ExPASy TrEMBL
Match: A0A6J1CZL8 (uncharacterized protein LOC111016241 OS=Momordica charantia OX=3673 GN=LOC111016241 PE=3 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 1.2e-04
Identity = 25/46 (54.35%), Postives = 31/46 (67.39%), Query Frame = 0


Query: 15  IIINDAPFVTPVFIKARQGRLTDFCCNRVYVVLDPRGNVVDAPYIG 61
           II  +AP+   V++     RL+DFCCNRVYVVLD RG V+D   IG
Sbjct: 501 IIKREAPYAIVVYLVPGMVRLSDFCCNRVYVVLDERGVVIDVAVIG 546

[Close]

BLAST of PI0028979 vs. NCBI nr
Match: KAE8653607.1 (hypothetical protein Csa_007299, partial [Cucumis sativus])

HSP 1 Score: 78.2 bits (191), Expect = 8.3e-11
Identity = 35/49 (71.43%), Postives = 40/49 (81.63%), Query Frame = 0


Query: 7  KKWRRSQRIIINDAPFVTPVFIKARQGRLTDFCCNRVYVVLDPRGNVVD 56
          K    ++RIII +APFVT VFIK  QGRLTDFCCNRVY+VLDP+ NVVD
Sbjct: 16 KSGGEAKRIIITEAPFVTAVFIKEGQGRLTDFCCNRVYIVLDPKDNVVD 64

[Close]

BLAST of PI0028979 vs. NCBI nr
Match: TYK07514.1 (proteinase inhibitor-like [Cucumis melo var. makuwa] >TYK21960.1 proteinase inhibitor-like [Cucumis melo var. makuwa] >TYK21972.1 proteinase inhibitor-like [Cucumis melo var. makuwa])

HSP 1 Score: 60.8 bits (146), Expect = 1.4e-05
Identity = 28/45 (62.22%), Postives = 32/45 (71.11%), Query Frame = 0


Query: 16 IINDAPFVTPVFIKARQGRLTDFCCNRVYVVLDPRGNVVDAPYIG 61
          I  DAPFVT VFI+  Q  L +FCCNRV VVLDP G V + P+IG
Sbjct: 49 INKDAPFVTVVFIRPGQVALPNFCCNRVNVVLDPSGKVSNIPFIG 93

[Close]

BLAST of PI0028979 vs. NCBI nr
Match: KAA0035178.1 (proteinase inhibitor-like [Cucumis melo var. makuwa])

HSP 1 Score: 60.8 bits (146), Expect = 1.4e-05
Identity = 28/45 (62.22%), Postives = 32/45 (71.11%), Query Frame = 0


Query: 16 IINDAPFVTPVFIKARQGRLTDFCCNRVYVVLDPRGNVVDAPYIG 61
          I  DAPFVT VFI+  Q  L +FCCNRV VVLDP G V + P+IG
Sbjct: 49 INKDAPFVTVVFIRPGQVALPNFCCNRVNVVLDPSGKVSNIPFIG 93

[Close]

BLAST of PI0028979 vs. NCBI nr
Match: XP_022147245.1 (uncharacterized protein LOC111016241 [Momordica charantia])

HSP 1 Score: 56.6 bits (135), Expect = 2.6e-04
Identity = 25/46 (54.35%), Postives = 31/46 (67.39%), Query Frame = 0


Query: 15  IIINDAPFVTPVFIKARQGRLTDFCCNRVYVVLDPRGNVVDAPYIG 61
           II  +AP+   V++     RL+DFCCNRVYVVLD RG V+D   IG
Sbjct: 501 IIKREAPYAIVVYLVPGMVRLSDFCCNRVYVVLDERGVVIDVAVIG 546

[Close]

BLAST of PI0028979 vs. TAIR 10
Match: AT3G46860.1 (Serine protease inhibitor, potato inhibitor I-type family protein )

HSP 1 Score: 46.2 bits (108), Expect = 3.2e-05
Identity = 20/54 (37.04%), Postives = 31/54 (57.41%), Query Frame = 0


Query: 7  KKWRRSQRIIINDAPFVTPVFIKARQGRLTDFCCNRVYVVLDPRGNVVDAPYIG 61
          K  + ++  I  + P V  + ++  + R+ +FCCNRV+V L   G V DAP IG
Sbjct: 32 KNGQLAKMTIERENPNVLAIVLRYGEKRIENFCCNRVFVYLGSNGQVADAPMIG 85

The following BLAST results are available for this feature:

BLAST of PI0028979 vs.


Match Name	E-value	Identity	Description

BLAST of PI0028979 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3DF00	6.6e-06	62.22	Proteinase inhibitor-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo...	[more]
A0A5A7SX46	6.6e-06	62.22	Proteinase inhibitor-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffo...	[more]
A0A6J1CZL8	1.2e-04	54.35	uncharacterized protein LOC111016241 OS=Momordica charantia OX=3673 GN=LOC111016...	[more]

BLAST of PI0028979 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8653607.1	8.3e-11	71.43	hypothetical protein Csa_007299, partial [Cucumis sativus]	[more]
TYK07514.1	1.4e-05	62.22	proteinase inhibitor-like [Cucumis melo var. makuwa] >TYK21960.1 proteinase inhi...	[more]
KAA0035178.1	1.4e-05	62.22	proteinase inhibitor-like [Cucumis melo var. makuwa]	[more]
XP_022147245.1	2.6e-04	54.35	uncharacterized protein LOC111016241 [Momordica charantia]	[more]

BLAST of PI0028979 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G46860.1	3.2e-05	37.04	Serine protease inhibitor, potato inhibitor I-type family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.30.10.10	Trypsin Inhibitor V, subunit A	coord: 7..60 e-value: 6.7E-10 score: 41.3
IPR000864	Proteinase inhibitor I13, potato inhibitor I	PFAM	PF00280	potato_inhibit	coord: 13..60 e-value: 7.6E-8 score: 32.9
IPR036354	Proteinase inhibitor I13, potato inhibitor I superfamily	SUPERFAMILY	54654	CI-2 family of serine protease inhibitors	coord: 9..60

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0028979.1	PI0028979.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009611	response to wounding
molecular_function	GO:0004867	serine-type endopeptidase inhibitor activity