PI0028952 (gene) Melon (PI 482460) v1

Overview
NamePI0028952
Typegene
OrganismCucumis metuliferus (Melon (PI 482460) v1)
Descriptionpathogenesis-related protein PR-4-like
Locationchr05: 2257634 .. 2258460 (-)
RNA-Seq ExpressionPI0028952
SyntenyPI0028952
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGAAAGGAAGTATTATGATGATATTGGTGTTGGCTTTGGGGGTTTTGAGCTTGGCAAATGCTCAAAGTGCCACAAATGTAAGAGCTACTTATCATTTGTACAACCCACAAAACATCAATTGGGACTACAATAAGGCAAGTGTTTATTGTGCAACATGGGATGCTAACAAGCCTTTGGAGTGGCGACGTCGGTATGGTTGGACTGCTTTTTGCGGCCCTGTCGGCCCTCGTGGCCAAGCTTCTTGTGGACGTTGTTTGAAGGTAAGTAAATCTTCTTGTTGACTACGAAGTTTTTTTATAACTACATTTTTTAAACTTCTTTCCATCCCTACAAAATTGTCATGTTTTAAAAAGTAATCTTAAAGTTCACTTAATCCTATATGGTGATAAAGAAGAAAATTCTATAAGCTGATAAATTTTAATGGGATGTAATATGTAGGTGACTAACACTGAAACACAAGCTTCAACAATAGTGAGAATTGTTGATCAATGCTCCAACGGAGGGTTGGATTTGGATGTAAATGTCTTTAACGCGATTGACACTAATGGAAATGGATACAGGAATGGCCATCTTAAGGTCAACTATCAGTTTGTCAATTGCTAATTAATCTACTTTAGTTTCTTTACATTCTTCCCAGAAGAAGAAAGAAAATCATGTTGTACTAAATAAAGTATATGAAGAATAAAAGTATGAAGAAATAAAGGTGTCTTTAATTTATGAGCTCTTTTTTTATGAAATAAAATGAATTTACAATAACCATATGCCAATGCCTTTTGAGAATTACCTGTTAAAGAATTGCTTATGTTTGAAGTGCTTCTATATT

mRNA sequence

ATGGAGAAAGGAAGTATTATGATGATATTGGTGTTGGCTTTGGGGGTTTTGAGCTTGGCAAATGCTCAAAGTGCCACAAATGTAAGAGCTACTTATCATTTGTACAACCCACAAAACATCAATTGGGACTACAATAAGGCAAGTGTTTATTGTGCAACATGGGATGCTAACAAGCCTTTGGAGTGGCGACGTCGGTATGGTTGGACTGCTTTTTGCGGCCCTGTCGGCCCTCGTGGCCAAGCTTCTTGTGGACGTTGTTTGAAGGTGACTAACACTGAAACACAAGCTTCAACAATAGTGAGAATTGTTGATCAATGCTCCAACGGAGGGTTGGATTTGGATGTAAATGTCTTTAACGCGATTGACACTAATGGAAATGGATACAGGAATGGCCATCTTAAGGTCAACTATCAGTTTGTCAATTGCTAATTAATCTACTTTAGTTTCTTTACATTCTTCCCAGAAGAAGAAAGAAAATCATGTTGTACTAAATAAAGTATATGAAGAATAAAAGTATGAAGAAATAAAGGTGTCTTTAATTTATGAGCTCTTTTTTTATGAAATAAAATGAATTTACAATAACCATATGCCAATGCCTTTTGAGAATTACCTGTTAAAGAATTGCTTATGTTTGAAGTGCTTCTATATT

Coding sequence (CDS)

ATGGAGAAAGGAAGTATTATGATGATATTGGTGTTGGCTTTGGGGGTTTTGAGCTTGGCAAATGCTCAAAGTGCCACAAATGTAAGAGCTACTTATCATTTGTACAACCCACAAAACATCAATTGGGACTACAATAAGGCAAGTGTTTATTGTGCAACATGGGATGCTAACAAGCCTTTGGAGTGGCGACGTCGGTATGGTTGGACTGCTTTTTGCGGCCCTGTCGGCCCTCGTGGCCAAGCTTCTTGTGGACGTTGTTTGAAGGTGACTAACACTGAAACACAAGCTTCAACAATAGTGAGAATTGTTGATCAATGCTCCAACGGAGGGTTGGATTTGGATGTAAATGTCTTTAACGCGATTGACACTAATGGAAATGGATACAGGAATGGCCATCTTAAGGTCAACTATCAGTTTGTCAATTGCTAA

Protein sequence

MEKGSIMMILVLALGVLSLANAQSATNVRATYHLYNPQNINWDYNKASVYCATWDANKPLEWRRRYGWTAFCGPVGPRGQASCGRCLKVTNTETQASTIVRIVDQCSNGGLDLDVNVFNAIDTNGNGYRNGHLKVNYQFVNC
Homology
[Close]
BLAST of PI0028952 vs. ExPASy Swiss-Prot
Match: P32045 (Pathogenesis-related protein P2 OS=Solanum lycopersicum OX=4081 PE=2 SV=1)

HSP 1 Score: 222.6 bits (566), Expect = 2.8e-57
Identity = 100/127 (78.74%), Postives = 110/127 (86.61%), Query Frame = 0 

Query: 16  VLSLANAQSATNVRATYHLYNPQNINWDYNKASVYCATWDANKPLEWRRRYGWTAFCGPV 75
           ++++A AQSATNVRATYHLYNPQNINWD   ASVYCATWDA+KPLEWRRRYGWTAFCGP 
Sbjct: 17  MMAVAAAQSATNVRATYHLYNPQNINWDLRTASVYCATWDADKPLEWRRRYGWTAFCGPA 76

Query: 76  GPRGQASCGRCLKVTNTETQASTIVRIVDQCSNGGLDLDVNVFNAIDTNGNGYRNGHLKV 135
           GP GQASCGRCL+VTNT T     VRIVDQC NGGLDLDVNVFN +DTNG GY+ G+L V
Sbjct: 77  GPTGQASCGRCLRVTNTGTGTQETVRIVDQCRNGGLDLDVNVFNRLDTNGLGYQRGNLNV 136

Query: 136 NYQFVNC 143
           NY+FVNC
Sbjct: 137 NYEFVNC 143

[Close]
BLAST of PI0028952 vs. ExPASy Swiss-Prot
Match: P29062 (Pathogenesis-related protein PR-4A OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 219.9 bits (559), Expect = 1.8e-56
Identity = 99/137 (72.26%), Postives = 115/137 (83.94%), Query Frame = 0 

Query: 6   IMMILVLALGVLSLANAQSATNVRATYHLYNPQNINWDYNKASVYCATWDANKPLEWRRR 65
           + + L++   V+++A AQSATNVR+TYHLYNPQNINWD   AS +CATWDA+KPL WR++
Sbjct: 9   LCVALLIISMVMAMAAAQSATNVRSTYHLYNPQNINWDLRAASAFCATWDADKPLAWRQK 68

Query: 66  YGWTAFCGPVGPRGQASCGRCLKVTNTETQASTIVRIVDQCSNGGLDLDVNVFNAIDTNG 125
           YGWTAFCGP GPRGQ SCGRCL+VTNT T   T VRIVDQCSNGGLDLDVNVFN +DTNG
Sbjct: 69  YGWTAFCGPAGPRGQDSCGRCLRVTNTGTGTQTTVRIVDQCSNGGLDLDVNVFNQLDTNG 128

Query: 126 NGYRNGHLKVNYQFVNC 143
            GY+ GHL VNY+FVNC
Sbjct: 129 VGYQQGHLTVNYEFVNC 145

[Close]
BLAST of PI0028952 vs. ExPASy Swiss-Prot
Match: P29063 (Pathogenesis-related protein PR-4B OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 216.1 bits (549), Expect = 2.6e-55
Identity = 97/137 (70.80%), Postives = 114/137 (83.21%), Query Frame = 0 

Query: 6   IMMILVLALGVLSLANAQSATNVRATYHLYNPQNINWDYNKASVYCATWDANKPLEWRRR 65
           + + L++   ++++A AQSATNVR+TYHLYNPQNINWD   AS +CATWDA+KPL WR++
Sbjct: 9   LCVALLIMSVMMAMAAAQSATNVRSTYHLYNPQNINWDLRAASAFCATWDADKPLAWRQK 68

Query: 66  YGWTAFCGPVGPRGQASCGRCLKVTNTETQASTIVRIVDQCSNGGLDLDVNVFNAIDTNG 125
           YGWTAFCGP GPRGQ SCGRCL+VTNT T     VRIVDQCSNGGLDLDVNVFN +DTNG
Sbjct: 69  YGWTAFCGPAGPRGQDSCGRCLRVTNTGTGTQATVRIVDQCSNGGLDLDVNVFNQLDTNG 128

Query: 126 NGYRNGHLKVNYQFVNC 143
            GY+ GHL VNY+FVNC
Sbjct: 129 LGYQQGHLIVNYEFVNC 145

[Close]
BLAST of PI0028952 vs. ExPASy Swiss-Prot
Match: P09761 (Wound-induced protein WIN1 OS=Solanum tuberosum OX=4113 GN=WIN1 PE=2 SV=1)

HSP 1 Score: 209.5 bits (532), Expect = 2.4e-53
Identity = 91/119 (76.47%), Postives = 101/119 (84.87%), Query Frame = 0 

Query: 24  SATNVRATYHLYNPQNINWDYNKASVYCATWDANKPLEWRRRYGWTAFCGPVGPRGQASC 83
           SA NVRATYH+YNPQN+ WD N  S YC+TWDANKPL WR++YGWTAFCGPVGPRG+ SC
Sbjct: 79  SAQNVRATYHIYNPQNVGWDLNAVSAYCSTWDANKPLSWRKKYGWTAFCGPVGPRGRDSC 138

Query: 84  GRCLKVTNTETQASTIVRIVDQCSNGGLDLDVNVFNAIDTNGNGYRNGHLKVNYQFVNC 143
           G+CL+VTNT T A T VRIVDQCSNGGLDLDVNVF  IDT+GNG   GHL VNYQFV+C
Sbjct: 139 GKCLRVTNTRTGAQTTVRIVDQCSNGGLDLDVNVFRQIDTDGNGNHQGHLIVNYQFVDC 197

[Close]
BLAST of PI0028952 vs. ExPASy Swiss-Prot
Match: P09762 (Wound-induced protein WIN2 OS=Solanum tuberosum OX=4113 GN=WIN2 PE=2 SV=1)

HSP 1 Score: 204.5 bits (519), Expect = 7.8e-52
Identity = 89/119 (74.79%), Postives = 99/119 (83.19%), Query Frame = 0 

Query: 24  SATNVRATYHLYNPQNINWDYNKASVYCATWDANKPLEWRRRYGWTAFCGPVGPRGQASC 83
           SA NVRATYH+YNPQN+ WD N  S YC+TWDANKP  WR +YGWTAFCGPVGPRG+ SC
Sbjct: 78  SAQNVRATYHIYNPQNVGWDLNAVSAYCSTWDANKPYAWRSKYGWTAFCGPVGPRGRDSC 137

Query: 84  GRCLKVTNTETQASTIVRIVDQCSNGGLDLDVNVFNAIDTNGNGYRNGHLKVNYQFVNC 143
           G+CL+VTNT T A T VRIVDQCSNGGLDLD+NVF  IDT+G G + GHL VNYQFVNC
Sbjct: 138 GKCLRVTNTRTGAQTTVRIVDQCSNGGLDLDINVFQQIDTDGVGNQQGHLIVNYQFVNC 196

[Close]
BLAST of PI0028952 vs. ExPASy TrEMBL
Match: A0A0A0LG76 (Barwin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G010380 PE=4 SV=1)

HSP 1 Score: 276.2 bits (705), Expect = 7.8e-71
Identity = 129/142 (90.85%), Postives = 135/142 (95.07%), Query Frame = 0 

Query: 1   MEKGSIMMILVLALGVLSLANAQSATNVRATYHLYNPQNINWDYNKASVYCATWDANKPL 60
           MEKGSI+MIL+LALGVLSLANAQSATNVRATYHLYNPQNINWDY KASVYCATWDANKPL
Sbjct: 1   MEKGSIVMILLLALGVLSLANAQSATNVRATYHLYNPQNINWDYMKASVYCATWDANKPL 60

Query: 61  EWRRRYGWTAFCGPVGPRGQASCGRCLKVTNTETQASTIVRIVDQCSNGGLDLDVNVFNA 120
           EWRRRY WTAFCGPVGPRGQASCGRCLKVTN ET+AST VRIVDQCSNGGLDLD+  F A
Sbjct: 61  EWRRRYDWTAFCGPVGPRGQASCGRCLKVTNVETKASTTVRIVDQCSNGGLDLDIKPFKA 120

Query: 121 IDTNGNGYRNGHLKVNYQFVNC 143
           IDTNGNGY+NGHLKVNY+FVNC
Sbjct: 121 IDTNGNGYKNGHLKVNYEFVNC 142

[Close]
BLAST of PI0028952 vs. ExPASy TrEMBL
Match: A0A5D3D4G8 (Pathogenesis-related protein PR-4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold456G001500 PE=4 SV=1)

HSP 1 Score: 265.0 bits (676), Expect = 1.8e-67
Identity = 126/142 (88.73%), Postives = 132/142 (92.96%), Query Frame = 0 

Query: 1   MEKGSIMMILVLALGVLSLANAQSATNVRATYHLYNPQNINWDYNKASVYCATWDANKPL 60
           MEKGSIMMILVLALGVLSLANAQSATNVRATYHLYNPQ+INWDY +ASV+CATWDANKPL
Sbjct: 1   MEKGSIMMILVLALGVLSLANAQSATNVRATYHLYNPQDINWDYLRASVFCATWDANKPL 60

Query: 61  EWRRRYGWTAFCGPVGPRGQASCGRCLKVTNTETQASTIVRIVDQCSNGGLDLDVNVFNA 120
           EWRRRYGWTAFCGPVGPRG+ SCGRCL+VTNTET AS IVRIVDQC+NGGLDLDVNVF  
Sbjct: 61  EWRRRYGWTAFCGPVGPRGRDSCGRCLRVTNTETGASEIVRIVDQCANGGLDLDVNVFRR 120

Query: 121 IDTNGNGYRNGHLKVNYQFVNC 143
           IDTNGNG   GHL VNYQFVNC
Sbjct: 121 IDTNGNGNFRGHLTVNYQFVNC 142

[Close]
BLAST of PI0028952 vs. ExPASy TrEMBL
Match: A0A1S3C3H6 (pathogenesis-related protein PR-4-like OS=Cucumis melo OX=3656 GN=LOC103496070 PE=4 SV=1)

HSP 1 Score: 265.0 bits (676), Expect = 1.8e-67
Identity = 126/142 (88.73%), Postives = 132/142 (92.96%), Query Frame = 0 

Query: 1   MEKGSIMMILVLALGVLSLANAQSATNVRATYHLYNPQNINWDYNKASVYCATWDANKPL 60
           MEKGSIMMILVLALGVLSLANAQSATNVRATYHLYNPQ+INWDY +ASV+CATWDANKPL
Sbjct: 1   MEKGSIMMILVLALGVLSLANAQSATNVRATYHLYNPQDINWDYLRASVFCATWDANKPL 60

Query: 61  EWRRRYGWTAFCGPVGPRGQASCGRCLKVTNTETQASTIVRIVDQCSNGGLDLDVNVFNA 120
           EWRRRYGWTAFCGPVGPRG+ SCGRCL+VTNTET AS IVRIVDQC+NGGLDLDVNVF  
Sbjct: 61  EWRRRYGWTAFCGPVGPRGRDSCGRCLRVTNTETGASEIVRIVDQCANGGLDLDVNVFRR 120

Query: 121 IDTNGNGYRNGHLKVNYQFVNC 143
           IDTNGNG   GHL VNYQFVNC
Sbjct: 121 IDTNGNGNFRGHLTVNYQFVNC 142

[Close]
BLAST of PI0028952 vs. ExPASy TrEMBL
Match: A0A6J1K9X1 (pathogenesis-related protein PR-4-like OS=Cucurbita maxima OX=3661 GN=LOC111493583 PE=4 SV=1)

HSP 1 Score: 259.6 bits (662), Expect = 7.6e-66
Identity = 121/142 (85.21%), Postives = 130/142 (91.55%), Query Frame = 0 

Query: 1   MEKGSIMMILVLALGVLSLANAQSATNVRATYHLYNPQNINWDYNKASVYCATWDANKPL 60
           MEKGS +MIL LALG+LSLANAQSA NVRATYHLYNPQ+INWDY +ASV+CATWDANKP+
Sbjct: 1   MEKGSFLMILALALGILSLANAQSANNVRATYHLYNPQDINWDYLRASVFCATWDANKPI 60

Query: 61  EWRRRYGWTAFCGPVGPRGQASCGRCLKVTNTETQASTIVRIVDQCSNGGLDLDVNVFNA 120
           EWRR+YGWTAFCGPVGPRGQASCGRCL+VTNTET AS IVRIVDQC+NGGLDLDVNVF  
Sbjct: 61  EWRRQYGWTAFCGPVGPRGQASCGRCLRVTNTETGASEIVRIVDQCANGGLDLDVNVFKR 120

Query: 121 IDTNGNGYRNGHLKVNYQFVNC 143
           IDTNGNG   GHL VNYQFVNC
Sbjct: 121 IDTNGNGVFRGHLIVNYQFVNC 142

[Close]
BLAST of PI0028952 vs. ExPASy TrEMBL
Match: A0A0A0LIC8 (Barwin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G010390 PE=4 SV=1)

HSP 1 Score: 258.5 bits (659), Expect = 1.7e-65
Identity = 123/142 (86.62%), Postives = 131/142 (92.25%), Query Frame = 0 

Query: 1   MEKGSIMMILVLALGVLSLANAQSATNVRATYHLYNPQNINWDYNKASVYCATWDANKPL 60
           M KGSIMMILVLALGVLSLANAQSATNVRATYHLYNPQ+INWDY +ASV+CATWDA+KPL
Sbjct: 1   MGKGSIMMILVLALGVLSLANAQSATNVRATYHLYNPQDINWDYLRASVFCATWDADKPL 60

Query: 61  EWRRRYGWTAFCGPVGPRGQASCGRCLKVTNTETQASTIVRIVDQCSNGGLDLDVNVFNA 120
           EWRR+YGWTAFCGPVGPRG+ SCGRCL+VTNTET AS IVRIVDQC+NGGLDLDVNVF  
Sbjct: 61  EWRRQYGWTAFCGPVGPRGRDSCGRCLRVTNTETGASEIVRIVDQCANGGLDLDVNVFRR 120

Query: 121 IDTNGNGYRNGHLKVNYQFVNC 143
           IDTNGNG   GHL VNYQFVNC
Sbjct: 121 IDTNGNGNLRGHLIVNYQFVNC 142

[Close]
BLAST of PI0028952 vs. NCBI nr
Match: XP_004139237.1 (pathogenesis-related protein PR-4A [Cucumis sativus] >KGN60803.1 hypothetical protein Csa_019268 [Cucumis sativus])

HSP 1 Score: 276.2 bits (705), Expect = 1.6e-70
Identity = 129/142 (90.85%), Postives = 135/142 (95.07%), Query Frame = 0 

Query: 1   MEKGSIMMILVLALGVLSLANAQSATNVRATYHLYNPQNINWDYNKASVYCATWDANKPL 60
           MEKGSI+MIL+LALGVLSLANAQSATNVRATYHLYNPQNINWDY KASVYCATWDANKPL
Sbjct: 1   MEKGSIVMILLLALGVLSLANAQSATNVRATYHLYNPQNINWDYMKASVYCATWDANKPL 60

Query: 61  EWRRRYGWTAFCGPVGPRGQASCGRCLKVTNTETQASTIVRIVDQCSNGGLDLDVNVFNA 120
           EWRRRY WTAFCGPVGPRGQASCGRCLKVTN ET+AST VRIVDQCSNGGLDLD+  F A
Sbjct: 61  EWRRRYDWTAFCGPVGPRGQASCGRCLKVTNVETKASTTVRIVDQCSNGGLDLDIKPFKA 120

Query: 121 IDTNGNGYRNGHLKVNYQFVNC 143
           IDTNGNGY+NGHLKVNY+FVNC
Sbjct: 121 IDTNGNGYKNGHLKVNYEFVNC 142

[Close]
BLAST of PI0028952 vs. NCBI nr
Match: XP_038890575.1 (pathogenesis-related protein PR-4-like [Benincasa hispida])

HSP 1 Score: 272.3 bits (695), Expect = 2.3e-69
Identity = 129/142 (90.85%), Postives = 133/142 (93.66%), Query Frame = 0 

Query: 1   MEKGSIMMILVLALGVLSLANAQSATNVRATYHLYNPQNINWDYNKASVYCATWDANKPL 60
           MEKGSIMMILVLALGVLS+ANAQSA NVRATYHLYNPQNINWDY +ASVYCATWDANKPL
Sbjct: 1   MEKGSIMMILVLALGVLSMANAQSANNVRATYHLYNPQNINWDYLRASVYCATWDANKPL 60

Query: 61  EWRRRYGWTAFCGPVGPRGQASCGRCLKVTNTETQASTIVRIVDQCSNGGLDLDVNVFNA 120
           EWRRRYGWTAFCGPVGPRGQASCGRCL+VTNTET ASTIVRIVDQCSNGGLDLDVNVF  
Sbjct: 61  EWRRRYGWTAFCGPVGPRGQASCGRCLRVTNTETGASTIVRIVDQCSNGGLDLDVNVFKQ 120

Query: 121 IDTNGNGYRNGHLKVNYQFVNC 143
           +DTNGNG   GHL VNYQFVNC
Sbjct: 121 LDTNGNGNFRGHLTVNYQFVNC 142

[Close]
BLAST of PI0028952 vs. NCBI nr
Match: XP_008456018.1 (PREDICTED: pathogenesis-related protein PR-4-like [Cucumis melo] >KAA0063603.1 pathogenesis-related protein PR-4-like [Cucumis melo var. makuwa] >TYK18424.1 pathogenesis-related protein PR-4-like [Cucumis melo var. makuwa])

HSP 1 Score: 265.0 bits (676), Expect = 3.7e-67
Identity = 126/142 (88.73%), Postives = 132/142 (92.96%), Query Frame = 0 

Query: 1   MEKGSIMMILVLALGVLSLANAQSATNVRATYHLYNPQNINWDYNKASVYCATWDANKPL 60
           MEKGSIMMILVLALGVLSLANAQSATNVRATYHLYNPQ+INWDY +ASV+CATWDANKPL
Sbjct: 1   MEKGSIMMILVLALGVLSLANAQSATNVRATYHLYNPQDINWDYLRASVFCATWDANKPL 60

Query: 61  EWRRRYGWTAFCGPVGPRGQASCGRCLKVTNTETQASTIVRIVDQCSNGGLDLDVNVFNA 120
           EWRRRYGWTAFCGPVGPRG+ SCGRCL+VTNTET AS IVRIVDQC+NGGLDLDVNVF  
Sbjct: 61  EWRRRYGWTAFCGPVGPRGRDSCGRCLRVTNTETGASEIVRIVDQCANGGLDLDVNVFRR 120

Query: 121 IDTNGNGYRNGHLKVNYQFVNC 143
           IDTNGNG   GHL VNYQFVNC
Sbjct: 121 IDTNGNGNFRGHLTVNYQFVNC 142

[Close]
BLAST of PI0028952 vs. NCBI nr
Match: XP_023521169.1 (pathogenesis-related protein P2-like [Cucurbita pepo subsp. pepo] >XP_023547312.1 pathogenesis-related protein P2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 264.6 bits (675), Expect = 4.9e-67
Identity = 123/142 (86.62%), Postives = 133/142 (93.66%), Query Frame = 0 

Query: 1   MEKGSIMMILVLALGVLSLANAQSATNVRATYHLYNPQNINWDYNKASVYCATWDANKPL 60
           M+KG  +M+L LALG+LSLANAQSATNVRATYHLYNPQ+INWDY +ASV+CATWDANKPL
Sbjct: 1   MDKGRFLMLLALALGILSLANAQSATNVRATYHLYNPQDINWDYLRASVFCATWDANKPL 60

Query: 61  EWRRRYGWTAFCGPVGPRGQASCGRCLKVTNTETQASTIVRIVDQCSNGGLDLDVNVFNA 120
           E+RRRYGWTAFCGPVGPRGQASCGRCL+VTNTET+AS IVRIVDQCSNGGLDLDVNVF  
Sbjct: 61  EFRRRYGWTAFCGPVGPRGQASCGRCLRVTNTETKASEIVRIVDQCSNGGLDLDVNVFRR 120

Query: 121 IDTNGNGYRNGHLKVNYQFVNC 143
           IDTNGNGYR GHL VNYQFVNC
Sbjct: 121 IDTNGNGYRRGHLIVNYQFVNC 142

[Close]
BLAST of PI0028952 vs. NCBI nr
Match: XP_022999102.1 (pathogenesis-related protein PR-4-like [Cucurbita maxima] >XP_023521168.1 pathogenesis-related protein PR-4-like [Cucurbita pepo subsp. pepo] >XP_023547311.1 pathogenesis-related protein PR-4-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 259.6 bits (662), Expect = 1.6e-65
Identity = 121/142 (85.21%), Postives = 130/142 (91.55%), Query Frame = 0 

Query: 1   MEKGSIMMILVLALGVLSLANAQSATNVRATYHLYNPQNINWDYNKASVYCATWDANKPL 60
           MEKGS +MIL LALG+LSLANAQSA NVRATYHLYNPQ+INWDY +ASV+CATWDANKP+
Sbjct: 1   MEKGSFLMILALALGILSLANAQSANNVRATYHLYNPQDINWDYLRASVFCATWDANKPI 60

Query: 61  EWRRRYGWTAFCGPVGPRGQASCGRCLKVTNTETQASTIVRIVDQCSNGGLDLDVNVFNA 120
           EWRR+YGWTAFCGPVGPRGQASCGRCL+VTNTET AS IVRIVDQC+NGGLDLDVNVF  
Sbjct: 61  EWRRQYGWTAFCGPVGPRGQASCGRCLRVTNTETGASEIVRIVDQCANGGLDLDVNVFKR 120

Query: 121 IDTNGNGYRNGHLKVNYQFVNC 143
           IDTNGNG   GHL VNYQFVNC
Sbjct: 121 IDTNGNGVFRGHLIVNYQFVNC 142

[Close]
BLAST of PI0028952 vs. TAIR 10
Match: AT3G04720.1 (pathogenesis-related 4 )

HSP 1 Score: 193.7 bits (491), Expect = 9.8e-50
Identity = 84/120 (70.00%), Postives = 97/120 (80.83%), Query Frame = 0 

Query: 23  QSATNVRATYHLYNPQNINWDYNKASVYCATWDANKPLEWRRRYGWTAFCGPVGPRGQAS 82
           +SA+NVRATYH YNP   NWD    S YC+TWDA+KP  WR +YGWTAFCGP GPRGQAS
Sbjct: 72  ESASNVRATYHFYNPAQNNWDLRAVSAYCSTWDADKPYAWRSKYGWTAFCGPAGPRGQAS 131

Query: 83  CGRCLKVTNTETQASTIVRIVDQCSNGGLDLDVNVFNAIDTNGNGYRNGHLKVNYQFVNC 142
           CG+CL+V NT T A+  VRIVDQCSNGGLDLDV +FN IDT+G GY+ GHL V+YQFV+C
Sbjct: 132 CGKCLRVKNTRTNAAVTVRIVDQCSNGGLDLDVAMFNQIDTDGFGYQQGHLIVDYQFVDC 191

The following BLAST results are available for this feature:
BLAST of PI0028952 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
P320452.8e-5778.74Pathogenesis-related protein P2 OS=Solanum lycopersicum OX=4081 PE=2 SV=1[more]
P290621.8e-5672.26Pathogenesis-related protein PR-4A OS=Nicotiana tabacum OX=4097 PE=2 SV=1[more]
P290632.6e-5570.80Pathogenesis-related protein PR-4B OS=Nicotiana tabacum OX=4097 PE=2 SV=1[more]
P097612.4e-5376.47Wound-induced protein WIN1 OS=Solanum tuberosum OX=4113 GN=WIN1 PE=2 SV=1[more]
P097627.8e-5274.79Wound-induced protein WIN2 OS=Solanum tuberosum OX=4113 GN=WIN2 PE=2 SV=1[more]
BLAST of PI0028952 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LG767.8e-7190.85Barwin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G010380 PE=4... [more]
A0A5D3D4G81.8e-6788.73Pathogenesis-related protein PR-4-like OS=Cucumis melo var. makuwa OX=1194695 GN... [more]
A0A1S3C3H61.8e-6788.73pathogenesis-related protein PR-4-like OS=Cucumis melo OX=3656 GN=LOC103496070 P... [more]
A0A6J1K9X17.6e-6685.21pathogenesis-related protein PR-4-like OS=Cucurbita maxima OX=3661 GN=LOC1114935... [more]
A0A0A0LIC81.7e-6586.62Barwin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G010390 PE=4... [more]
BLAST of PI0028952 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004139237.11.6e-7090.85pathogenesis-related protein PR-4A [Cucumis sativus] >KGN60803.1 hypothetical pr... [more]
XP_038890575.12.3e-6990.85pathogenesis-related protein PR-4-like [Benincasa hispida][more]
XP_008456018.13.7e-6788.73PREDICTED: pathogenesis-related protein PR-4-like [Cucumis melo] >KAA0063603.1 p... [more]
XP_023521169.14.9e-6786.62pathogenesis-related protein P2-like [Cucurbita pepo subsp. pepo] >XP_023547312.... [more]
XP_022999102.11.6e-6585.21pathogenesis-related protein PR-4-like [Cucurbita maxima] >XP_023521168.1 pathog... [more]
BLAST of PI0028952 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G04720.19.8e-5070.00pathogenesis-related 4 [more]
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001153Barwin domainPRINTSPR00602BARWINcoord: 117..141
score: 68.53
coord: 58..76
score: 79.3
coord: 96..114
score: 80.7
coord: 77..95
score: 67.37
IPR001153Barwin domainPFAMPF00967Barwincoord: 24..142
e-value: 4.8E-61
score: 203.9
IPR001153Barwin domainPROSITEPS51174BARWIN_3coord: 23..142
score: 82.979576
IPR036908RlpA-like domain superfamilyGENE3D2.40.40.10coord: 23..142
e-value: 4.9E-58
score: 196.2
IPR036908RlpA-like domain superfamilySUPERFAMILY50685Barwin-like endoglucanasescoord: 23..142
IPR044301Pathogenesis-related protein-4PANTHERPTHR46351WOUND-INDUCED PROTEIN WIN2coord: 7..142
IPR018226Barwin, conserved sitePROSITEPS00771BARWIN_1coord: 83..91
IPR018226Barwin, conserved sitePROSITEPS00772BARWIN_2coord: 135..142

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
PI0028952.1PI0028952.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0042742 defense response to bacterium
biological_process GO:0050832 defense response to fungus
biological_process GO:0090501 RNA phosphodiester bond hydrolysis
biological_process GO:0006952 defense response
molecular_function GO:0004540 ribonuclease activity