
PI0028900 (gene) Melon (PI 482460) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGGGGGCCATCCTATAGTGGGTTTGGATGGAATGAAGAATATCAATGCATCATCGTAGAACGGGAGTTGTTTGATAGTTGGGTCAAGGTACAATTTTCATAATGTGAATTTGATATACTTTCGAAATCACAACCATTAACTAATCTGTCTGTTTCATGTTTGTATAGAGTCATCTTGAGGCCAAAGGACTTTTACACAAATCATTTCCATATTATGACGATCTGTCGTATGTGTTCGACAGAGATCGGGCAACAGGAGCATATGCAGAGACCTTTACTGACGTGGGATCTAATGTGCCAAACAGTTTTAATGACGGTGTTCCACTTGATGATCTACATGATGAAGACATCCCGGATGTATAGCCAATGAGTGGATATGTCCCCAGATGACATGTTAGGAAAACGTGCAGGTCGATCAAGTGAAGGATGAAATTGTTCAAGTGGGAGTAAGAGGAAACGGGGTGGCCAACATAATGAAATAGTGGAGGTGATCAAGTATGCAATGGACTTTGCAAATGATCAATTTAAGGTAATTGCCGATTGACCAAAAGAGAAGCGTGCAACAAAGGTCGAATTGCGTGCTGAAGTCGTGAAACAACTGCAAGGTATCCCAGAACTACGGAGCTGA ATGAGGGGGCCATCCTATAGTGGGTTTGGATGGAATGAAGAATATCAATGCATCATCGTAGAACGGGAGTTGTTTGATAGTTGGGTCAAGGACTTTTACACAAATCATTTCCATATTATGACGATCTGTCGTATGTGTTCGACAGAGATCGGGCAACAGGAGCATATGCAGAGACCTTTACTGACGTGGGATCTAATGTGCCAAACAGTTTTAATGACGGTCGATCAAGTGAAGGATGAAATTGTTCAAGTGGGAGTAAGAGGAAACGGGAAGCGTGCAACAAAGGTCGAATTGCGTGCTGAAGTCGTGAAACAACTGCAAGGTATCCCAGAACTACGGAGCTGA ATGAGGGGGCCATCCTATAGTGGGTTTGGATGGAATGAAGAATATCAATGCATCATCGTAGAACGGGAGTTGTTTGATAGTTGGGTCAAGGACTTTTACACAAATCATTTCCATATTATGACGATCTGTCGTATGTGTTCGACAGAGATCGGGCAACAGGAGCATATGCAGAGACCTTTACTGACGTGGGATCTAATGTGCCAAACAGTTTTAATGACGGTCGATCAAGTGAAGGATGAAATTGTTCAAGTGGGAGTAAGAGGAAACGGGAAGCGTGCAACAAAGGTCGAATTGCGTGCTGAAGTCGTGAAACAACTGCAAGGTATCCCAGAACTACGGAGCTGA MRGPSYSGFGWNEEYQCIIVERELFDSWVKDFYTNHFHIMTICRMCSTEIGQQEHMQRPLLTWDLMCQTVLMTVDQVKDEIVQVGVRGNGKRATKVELRAEVVKQLQGIPELRS Homology
BLAST of PI0028900 vs. ExPASy TrEMBL
Match: A0A0A0M343 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G651700 PE=4 SV=1) HSP 1 Score: 130.6 bits (327), Expect = 4.3e-27 Identity = 75/126 (59.52%), Postives = 84/126 (66.67%), Query Frame = 0
BLAST of PI0028900 vs. ExPASy TrEMBL
Match: A0A5D3DG22 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold523G00290 PE=3 SV=1) HSP 1 Score: 72.4 bits (176), Expect = 1.4e-09 Identity = 50/159 (31.45%), Postives = 71/159 (44.65%), Query Frame = 0
BLAST of PI0028900 vs. ExPASy TrEMBL
Match: A0A5A7UCJ1 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold55G00900 PE=3 SV=1) HSP 1 Score: 70.5 bits (171), Expect = 5.2e-09 Identity = 34/70 (48.57%), Postives = 43/70 (61.43%), Query Frame = 0
BLAST of PI0028900 vs. ExPASy TrEMBL
Match: A0A5A7U0H7 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold648G002060 PE=4 SV=1) HSP 1 Score: 63.9 bits (154), Expect = 4.9e-07 Identity = 25/30 (83.33%), Postives = 28/30 (93.33%), Query Frame = 0
BLAST of PI0028900 vs. ExPASy TrEMBL
Match: A0A1S3B4L3 (uncharacterized protein LOC103485953 OS=Cucumis melo OX=3656 GN=LOC103485953 PE=4 SV=1) HSP 1 Score: 63.9 bits (154), Expect = 4.9e-07 Identity = 25/30 (83.33%), Postives = 28/30 (93.33%), Query Frame = 0
BLAST of PI0028900 vs. NCBI nr
Match: KGN66636.1 (hypothetical protein Csa_007482 [Cucumis sativus]) HSP 1 Score: 130.6 bits (327), Expect = 8.8e-27 Identity = 75/126 (59.52%), Postives = 84/126 (66.67%), Query Frame = 0
BLAST of PI0028900 vs. NCBI nr
Match: KAA0062747.1 (retrotransposon protein [Cucumis melo var. makuwa] >TYK22546.1 retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 72.4 bits (176), Expect = 2.8e-09 Identity = 50/159 (31.45%), Postives = 71/159 (44.65%), Query Frame = 0
BLAST of PI0028900 vs. NCBI nr
Match: KAA0051365.1 (retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 70.5 bits (171), Expect = 1.1e-08 Identity = 34/70 (48.57%), Postives = 43/70 (61.43%), Query Frame = 0
BLAST of PI0028900 vs. NCBI nr
Match: XP_008441954.1 (PREDICTED: uncharacterized protein LOC103485953 [Cucumis melo] >KAA0047736.1 retrotransposon protein [Cucumis melo var. makuwa] >TYK08388.1 retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 63.9 bits (154), Expect = 1.0e-06 Identity = 25/30 (83.33%), Postives = 28/30 (93.33%), Query Frame = 0
BLAST of PI0028900 vs. NCBI nr
Match: TYK05827.1 (retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 62.4 bits (150), Expect = 2.9e-06 Identity = 32/71 (45.07%), Postives = 41/71 (57.75%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
|