PI0028822 (gene) Melon (PI 482460) v1

Overview


Name	PI0028822
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Ribosome biogenesis regulatory protein
Location	chr02: 3900911 .. 3904865 (+)
RNA-Seq Expression	PI0028822
Synteny	PI0028822

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTTTTAGGGTTTCCAATTTTATTATAGAGAAGCCTCTGTCGTCGGCAGTTTACCTAGGTGGTCGGAGTATGGAGATCGAAAATCAGCATCCGTTTCAGATTGACCTTGGTCATCTAATGGCATTCAATCCTCACCATCAGTTTCCTTCACTTCCCTCCTCCAGGTTAGTTCTTCTTCGTATTTGGACCCTGATTTTTCTTGGCAACTCGCAATTCTCTCCTCTTTTTTTGAACTTCATTCCTTAGTAGGAAGATGAAAAACAGTTGTTTGTAGCGATTTCTCTTTTCTGAATTTCTCATGTTCTGTCTGTCTCACTAAGGTTAAGAACACTTGTGTGGTGTAGTTTGGCTTTTGGATATTATACTATGCACATTCCCTTGTAGTGTTTTTCTGAACTTTGGTGGTGAAAATCACCCGGGTGTCTGAGTTTTTCCATCTATGGTAGGTATAGACTTTGGGCAGATGATCGTGAATAAACCCTAAACCACCCTAAACCCATGTCTGCATCGGTAACTTCCAAATGTTTCATTCTTGTCAATCCAATTAGAAATATCTAACTTTTGAATCCTTAGCTTTTGATTTTGTTTGGTTTAGGTTGTGAAGTGTTTTATTTTGAAAATAAGTCGTTTCAGAAAAATTGGATTGTTTTACAACACTCAAAGTAGCTAATTTTTCAAAATGTAATTGAAATAGGTTTTATCTAAAGAGTTCAAATGAAAATAAATTTTTGAAAAAACACTTTTTTTTCTAGTCAATCCTAAGATGGCACTTCATCTGTTTGAGGCTTTTCCAATATTTAGAGCATCTAATTGCTTGTATTGTTTGAAGAGGATCTCTATTATCTTTGCTTAGTTTTAGTTATTTATTTTTTAATTTGATCACTAGGGAGGATCTAGTGAATGAATGTCTGCAAAAGGGAACTGAGTTAGTTCAATTTATTGCCAATGATCTTTTCAACCTGCCTTCAACTGAAGACAGAGACGGCCCCCTTGTGAGGTTGCCTCCACCTACTACAAGATTGCCGAGAGAGAAACCTGTAAGACCTCGTGTGACTCTCTCGTCTCATTTACTTCTCTTTCAATCTATAAGATTTCTTCACTTGGTAACAACTGTCGTTGATCGTACTGTATCCAATAACAGTGGCTGCAAATATTAATTCTGTAGTTTTTGGCTGAGGCGATCTTTTCTTTTTCTTTTCCAGCTTCCGAAGCCGAAACCTCCTACAAAATGGGAACTTTTTGCCCAAAAAAAAGGTCAGTTGTTTGATTTGCAGCCTATACTAGGGTAGATTTGATAGAGCAATTGCACATTCCCTCCCTTACGAAAAAAAGTGAAAAAACAACTGAAAGAAGAAACAGCATCACTAACTTAGTTAATTTGATAACTATCTATTTCTCGTTTATAATTATATTGTTTCAAAAATAATTTTGCAGGCATAAAGAATCGTAAAAAAGATAAGAGAGTGTATGATGAACAGACACATACATGGAAACGTCGCCATGGTTATGATCGTGCAAATGATGAGGATAAGATTCCCATAATTGAGGCCAAGATGACTGACGGTAGGGTTTTTTTATTATTTTTTAAAATTTTATGATTAATCGTTCTACTGGTTATTCTAGTTTTGATGTTTTTTTTTTTGTTTTCTTTTGCTTTTTTCTTTTTGCAAATTGATTTGCAAAATTGCACTCAGTTGGATCATTGAGATAATAAACTGATTAATCGATTGCATTACTGGCTGCACTTTATGCCTATGACACATTAAAAGTGCCGAAGTGGCTTTCATGTATTACGTTTGATTTGTCTTGCAGAGTCTGGGGAGGATCCCTTTGCTGCAAGGCAAGCCGATAAGAAAAAACGAGTTGAAAAGCAAGAAAAGAATCGATTACAAAATCTGAAGCAAGCTGCAAAAGTTGGCGCTCTACCTAGGTTTACCTCTTATGACAGTTTTTTTTCCAACCTCAGTTTATAATACACGAGTTCCATTGAAATTTATGGCTTCATCAATGTTTTGGCCAACTATTAGAGTTGAGACATTGTCCATATTTTTCTCATGTTTTGCATTATAGTGTTCATCTTCATTCATATCTTCCTTACTCTTCACACAATCTATTCTTGATGGTCTAAAATTCACTGTTTCAGCCACATCCAACTAGCTGCCACTGCTTTGCCTATAACGGGAACTCAAGCTGCACCTAAGAAAATCACTAAAGATGAACTTGGAAATGTAGCTGGAATGGCAGCAACTTCAACAGCCAGTGGTGGAAAGTTCGACAAGAAGTTTGCAGGAGAAAAACCTGCGAAACATCAAGGAAAATATCGCAAGGTTAATAGAATAAGCCTGTCGATCTGCATTTATGCTATGGACTATGGTTACTTTATGTGTTTGGATTAACTTTCTAATTGTTTATAATTTATTTTTTGATTCATAAACACTTATTTAAATACTTAGAAAGTCAATCCAAATACGCTCTTATATTTCTCGTAAAAGGTTGTGATTCATTTTTTGTATTTGCATATAGTTTCTGCCTGTTGTGGAGGGAACAGGGATAGGCTCTCGAGAAAGAGAGCAAACTGAGAAAGTTCTTAGCAGATTAATTTCCAAGAATTCACATGAGATTCTCAACGTTAATAAGGTTTGACTGCTGAACTACACATCTCTACTTGTTAAAATGATAAATAGATGCATATATTTTATTGTTTCATGCAATGCAACTCCTATGGTTTTGAATCTATCGATTTTTGTACTGGGATGACATGAGGTCGAGCACAAAATCATACCTCTTTTTGTTACATCGTCTAAATTGGAATAAGTAAATGCCATGCTACTTTTTTTTCTTTTCTTTTTTCTTTTTCTTTTTCTTTTATAAATTTTTATATTATATTATTTATTTGGTTGCAAATGGATCTTGTGATAAATATTCATGTATGATTTATCCTGCAAGCACCAACGATGAGTCTTATCAGACTAGAGAAGGGATTTTCTAATCACATTAAATTGATAATTTTTGGAATTATTTTTATTTTATTTTTTAGTACAGTGAGGGAATGAAGATTTGGATCTTTAGATTCTCTACATGTCAATTATCGTTGAGCTGTGCATTTTTGCGTTTTTGGAATTACGTATCTCTAAGCTTATTTTGGTCTTATTTTCAGACTGTCAACATGTTCAATTACTTGTTTGTTCATCTATTTTCATGCGAGTAGCAACAATTCGTCTTAATTAGAGAAGAAGGGCTTTTCTCTAATCTTATTAAATTCTAAGCTTTTTGGAGTTGTTTTATTTTATTAATTCTTTTTAATACTGGAGATTTGCATCTCCAACCTTCGAGTGAAAGAGTGAAATACGGTTGAACCATGCTTGCTTTGACTTTGTGGAATTATCTATCTCTAAGCTTATTTTGGATTCATTGTCTTTATTTTCAGGCTGTCAACATGTATAACGTTAAAAAAGAAAAGAAACAGAGAAACCAACAAGGAAAATCTTCATCGATGTCGAGCAAGTTGAAGCCAAATAAGAAACTTCAGAAGAAGCCATTGAAGAAGGGATCTTCAAAGCAAGGAAAGGCAAAATGATCAGATTACATTCTGGTTTAAGTTTTGAATGGATTTTATGTACCATCATTATCATCATTATTTAGTATTAGTAGTGAAGGAATGTGAGTTATTTAAAAAATTTCTTTTTCCCCAACTCATCTCTCCCATGAGATAAAAAGCAATTTTGTAAAAGGTCATTTCAGCTGTGAATTTGCTCAAAGCTAATTTAGTTCCATTTTTCATTTTTCATCTTCGGTTTCTATATATATATATATTATGCACCCTTAGTTTGATTAATTATTGTTAATTGGTTACTTCTTCAAATTTTATTTTGAAGTTTTATATAGTTTTCTGTGAGGATGGTTCTGGGGACATTTGTTGTATACAAAATGATTTGAATCTGATTTGAACATTATAA

mRNA sequence

GTTTTAGGGTTTCCAATTTTATTATAGAGAAGCCTCTGTCGTCGGCAGTTTACCTAGGTGGTCGGAGTATGGAGATCGAAAATCAGCATCCGTTTCAGATTGACCTTGGTCATCTAATGGCATTCAATCCTCACCATCAGTTTCCTTCACTTCCCTCCTCCAGGGAGGATCTAGTGAATGAATGTCTGCAAAAGGGAACTGAGTTAGTTCAATTTATTGCCAATGATCTTTTCAACCTGCCTTCAACTGAAGACAGAGACGGCCCCCTTGTGAGGTTGCCTCCACCTACTACAAGATTGCCGAGAGAGAAACCTCTTCCGAAGCCGAAACCTCCTACAAAATGGGAACTTTTTGCCCAAAAAAAAGGCATAAAGAATCGTAAAAAAGATAAGAGAGTGTATGATGAACAGACACATACATGGAAACGTCGCCATGGTTATGATCGTGCAAATGATGAGGATAAGATTCCCATAATTGAGGCCAAGATGACTGACGAGTCTGGGGAGGATCCCTTTGCTGCAAGGCAAGCCGATAAGAAAAAACGAGTTGAAAAGCAAGAAAAGAATCGATTACAAAATCTGAAGCAAGCTGCAAAAGTTGGCGCTCTACCTAGCCACATCCAACTAGCTGCCACTGCTTTGCCTATAACGGGAACTCAAGCTGCACCTAAGAAAATCACTAAAGATGAACTTGGAAATGTAGCTGGAATGGCAGCAACTTCAACAGCCAGTGGTGGAAAGTTCGACAAGAAGTTTGCAGGAGAAAAACCTGCGAAACATCAAGGAAAATATCGCAAGTTTCTGCCTGTTGTGGAGGGAACAGGGATAGGCTCTCGAGAAAGAGAGCAAACTGAGAAAGTTCTTAGCAGATTAATTTCCAAGAATTCACATGAGATTCTCAACGTTAATAAGGCTGTCAACATGTATAACGTTAAAAAAGAAAAGAAACAGAGAAACCAACAAGGAAAATCTTCATCGATGTCGAGCAAGTTGAAGCCAAATAAGAAACTTCAGAAGAAGCCATTGAAGAAGGGATCTTCAAAGCAAGGAAAGGCAAAATGATCAGATTACATTCTGGTTTAAGTTTTGAATGGATTTTATGTACCATCATTATCATCATTATTTAGTATTAGTAGTGAAGGAATGTGAGTTATTTAAAAAATTTCTTTTTCCCCAACTCATCTCTCCCATGAGATAAAAAGCAATTTTGTAAAAGGTCATTTCAGCTGTGAATTTGCTCAAAGCTAATTTAGTTCCATTTTTCATTTTTCATCTTCGGTTTCTATATATATATATATTATGCACCCTTAGTTTGATTAATTATTGTTAATTGGTTACTTCTTCAAATTTTATTTTGAAGTTTTATATAGTTTTCTGTGAGGATGGTTCTGGGGACATTTGTTGTATACAAAATGATTTGAATCTGATTTGAACATTATAA

Coding sequence (CDS)

ATGGAGATCGAAAATCAGCATCCGTTTCAGATTGACCTTGGTCATCTAATGGCATTCAATCCTCACCATCAGTTTCCTTCACTTCCCTCCTCCAGGGAGGATCTAGTGAATGAATGTCTGCAAAAGGGAACTGAGTTAGTTCAATTTATTGCCAATGATCTTTTCAACCTGCCTTCAACTGAAGACAGAGACGGCCCCCTTGTGAGGTTGCCTCCACCTACTACAAGATTGCCGAGAGAGAAACCTCTTCCGAAGCCGAAACCTCCTACAAAATGGGAACTTTTTGCCCAAAAAAAAGGCATAAAGAATCGTAAAAAAGATAAGAGAGTGTATGATGAACAGACACATACATGGAAACGTCGCCATGGTTATGATCGTGCAAATGATGAGGATAAGATTCCCATAATTGAGGCCAAGATGACTGACGAGTCTGGGGAGGATCCCTTTGCTGCAAGGCAAGCCGATAAGAAAAAACGAGTTGAAAAGCAAGAAAAGAATCGATTACAAAATCTGAAGCAAGCTGCAAAAGTTGGCGCTCTACCTAGCCACATCCAACTAGCTGCCACTGCTTTGCCTATAACGGGAACTCAAGCTGCACCTAAGAAAATCACTAAAGATGAACTTGGAAATGTAGCTGGAATGGCAGCAACTTCAACAGCCAGTGGTGGAAAGTTCGACAAGAAGTTTGCAGGAGAAAAACCTGCGAAACATCAAGGAAAATATCGCAAGTTTCTGCCTGTTGTGGAGGGAACAGGGATAGGCTCTCGAGAAAGAGAGCAAACTGAGAAAGTTCTTAGCAGATTAATTTCCAAGAATTCACATGAGATTCTCAACGTTAATAAGGCTGTCAACATGTATAACGTTAAAAAAGAAAAGAAACAGAGAAACCAACAAGGAAAATCTTCATCGATGTCGAGCAAGTTGAAGCCAAATAAGAAACTTCAGAAGAAGCCATTGAAGAAGGGATCTTCAAAGCAAGGAAAGGCAAAATGA

Protein sequence

MEIENQHPFQIDLGHLMAFNPHHQFPSLPSSREDLVNECLQKGTELVQFIANDLFNLPSTEDRDGPLVRLPPPTTRLPREKPLPKPKPPTKWELFAQKKGIKNRKKDKRVYDEQTHTWKRRHGYDRANDEDKIPIIEAKMTDESGEDPFAARQADKKKRVEKQEKNRLQNLKQAAKVGALPSHIQLAATALPITGTQAAPKKITKDELGNVAGMAATSTASGGKFDKKFAGEKPAKHQGKYRKFLPVVEGTGIGSREREQTEKVLSRLISKNSHEILNVNKAVNMYNVKKEKKQRNQQGKSSSMSSKLKPNKKLQKKPLKKGSSKQGKAK

Homology

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BLAST of PI0028822 vs. ExPASy Swiss-Prot
Match: Q9SH88 (Ribosome biogenesis regulatory protein homolog OS=Arabidopsis thaliana OX=3702 GN=At2g37990 PE=2 SV=2)

HSP 1 Score: 404.8 bits (1039), Expect = 9.2e-112
Identity = 216/320 (67.50%), Postives = 258/320 (80.62%), Query Frame = 0


Query: 2   EIENQHPFQIDLGHLMAFNPHHQFPSLPSSREDLVNECLQKGTELVQFIANDLFNLPSTE 61
           E+E +  +Q+D+G+L+AFNP+H+FPS PSSR +LV E L +GT+LVQ IAN LFN PSTE
Sbjct: 4   EMETEQIYQVDVGNLLAFNPNHRFPSAPSSRGELVKEILTEGTKLVQEIANKLFNFPSTE 63

Query: 62  DRDGPLVRLPPPTTRLPREKPLPKPKPPTKWELFAQKKGIKNRKKDKRVYDEQTHTWKRR 121
             DGP+V+LPPPTT+LPREK +P+PKPPTKWE FA KKGI+ RKK+K V+DEQT+ +KRR
Sbjct: 64  TNDGPIVQLPPPTTKLPREKHIPRPKPPTKWEEFALKKGIQKRKKEKVVWDEQTNQFKRR 123

Query: 122 HGYDRANDEDKIPIIEAKMTDESGEDPFAARQADKKKRVEKQEKNRLQNLKQAAKVGALP 181
           HGYDR ND++ +PIIEAK +DE G DPFA R  DKKKRV KQEKNRLQNLK A K GALP
Sbjct: 124 HGYDRVNDDNDVPIIEAKESDEPGVDPFAKRLDDKKKRVGKQEKNRLQNLKAAEKAGALP 183

Query: 182 SHIQLAATALPITGTQAAPKKITKDELGNVAGMAATSTASGGKFDKKFAGEKPAKHQGKY 241
           SH+QLAAT+LPI+GT+A PKKI KDELG+VAG+AATSTASGGKFDKK  GEKP K QGK+
Sbjct: 184 SHVQLAATSLPISGTKAQPKKIGKDELGDVAGLAATSTASGGKFDKKLPGEKPPKKQGKH 243

Query: 242 RKFLPVVEGTGIGSREREQTEKVLSRLISKNSHEILNVNKAVNMYNVKKEKKQRNQQGKS 301
            K+LPVV G G  + E+EQT  VLS++ SK+SHEILNV KA+NMYNVKKEKK+       
Sbjct: 244 HKYLPVVSGRGDVNAEKEQTNNVLSKIFSKHSHEILNVGKAINMYNVKKEKKK------- 303

Query: 302 SSMSSKLKPNKKLQKKPLKK 322
           S  S KLKP K + KKP  K
Sbjct: 304 SGRSDKLKPKKDITKKPANK 316

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BLAST of PI0028822 vs. ExPASy Swiss-Prot
Match: Q15050 (Ribosome biogenesis regulatory protein homolog OS=Homo sapiens OX=9606 GN=RRS1 PE=1 SV=2)

HSP 1 Score: 132.1 bits (331), Expect = 1.1e-29
Identity = 117/331 (35.35%), Postives = 173/331 (52.27%), Query Frame = 0


Query: 3   IENQHPFQIDLGHLMAF--NPHHQFPSLPSSREDLVNECLQKGTELVQFIANDLFNLPST 62
           +  +   Q DLG+L+A   NP         + E  +    +  T+L   + N L+ LP+ 
Sbjct: 26  VHKELELQFDLGNLLASDRNPPTGLRCAGPTPEAELQALARDNTQL---LINQLWQLPTE 85

Query: 63  EDRDGPLVRLPPPTTRLPREKPLPKPKPPTKWELFAQKKGIKNRKKDKRVYDEQTHTWKR 122
              +  + RLP PTTRLPREKPLP+P+P T+W+ FA+ KGI+ +KK   V+DE +  W+R
Sbjct: 86  RVEEAIVARLPEPTTRLPREKPLPRPRPLTRWQQFARLKGIRPKKKTNLVWDEVSGQWRR 145

Query: 123 RHGYDRANDEDKIPIIEAKMTDESGEDPFAARQADKKKRVEKQEKNRLQNLKQAAKVGAL 182
           R GY RA D+ K  +IE     +  ED FA R   KK+RV K E NRL+NL +A K+  L
Sbjct: 146 RWGYQRARDDTKEWLIEVPGNADPLEDQFAKRIQAKKERVAKNELNRLRNLARAHKM-QL 205

Query: 183 PSHIQLAATALPITGTQAAPKKITKDELGNVAGMAATSTASGGKFDKKFAGEKPAKHQGK 242
           PS     A  L  TG Q      +K+ELG    +A  STAS G+F ++   EK  +  GK
Sbjct: 206 PS-----AAGLHPTGHQ------SKEELGRAMQVAKVSTASVGRFQERLPKEKVPRGSGK 265

Query: 243 YRKFLPVVEGTGIGSREREQTEKVLSRLISKNSHEILNVNKAVNMYNVKKEK----KQRN 302
            RKF P+    G  + E++   ++L  + SK     L+V +A N    ++++    K+R 
Sbjct: 266 KRKFQPLF---GDFAAEKKNQLELLRVMNSKKPQ--LDVTRATNKQMREEDQEEAAKRRK 325

Query: 303 QQGKSSSMSSKLKPNKKLQKKPLKKGSSKQG 328
              K      +  P  K +  P  +G  ++G
Sbjct: 326 MSQKGKRKGGRQGPGGKRKGGPPSQGGKRKG 336

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BLAST of PI0028822 vs. ExPASy Swiss-Prot
Match: Q9CYH6 (Ribosome biogenesis regulatory protein homolog OS=Mus musculus OX=10090 GN=Rrs1 PE=1 SV=1)

HSP 1 Score: 130.6 bits (327), Expect = 3.3e-29
Identity = 114/331 (34.44%), Postives = 174/331 (52.57%), Query Frame = 0


Query: 3   IENQHPFQIDLGHLMAF--NPHHQFPSLPSSREDLVNECLQKGTELVQFIANDLFNLPST 62
           +  +   + DLG+L+A   NP         S E  +    +  T+L   + N L+ LP+ 
Sbjct: 26  VHKELELEFDLGNLLASDRNPPTVLRQAGPSPEAELRALARDNTQL---LINQLWRLPTE 85

Query: 63  EDRDGPLVRLPPPTTRLPREKPLPKPKPPTKWELFAQKKGIKNRKKDKRVYDEQTHTWKR 122
              +  + RLP P TRLPREKPLP+P+P T+W+ FA+ KGI+ +KK   V+DE +  W+R
Sbjct: 86  RVEEAVVARLPEPATRLPREKPLPRPRPLTRWQQFARLKGIRPKKKTNLVWDEASGQWRR 145

Query: 123 RHGYDRANDEDKIPIIEAKMTDESGEDPFAARQADKKKRVEKQEKNRLQNLKQAAKVGAL 182
           R GY RA D+ K  +IE   + +  ED FA R   KK+RV K E NRL+NL +A K+  +
Sbjct: 146 RWGYKRARDDTKEWLIEVPGSADPMEDQFAKRTQAKKERVAKNELNRLRNLARAHKM-QM 205

Query: 183 PSHIQLAATALPITGTQAAPKKITKDELGNVAGMAATSTASGGKFDKKFAGEKPAKHQGK 242
           PS     +  L  TG Q      +K+ELG    +A  STAS G+F ++   EK  +  GK
Sbjct: 206 PS-----SAGLHPTGHQ------SKEELGRAMQVAKVSTASVGRFQERLPKEKAPRGSGK 265

Query: 243 YRKFLPVVEGTGIGSREREQTEKVLSRLISKNSHEILNVNKAVNMYNVKKEK----KQRN 302
            RKF P+    G  + E++   ++L  + SK     L+V +A N    ++++    K+R 
Sbjct: 266 KRKFQPLF---GDFAAEKKNQLELLRVMNSKKPR--LDVTRATNKQMREEDQEEAAKRRK 325

Query: 303 QQGKSSSMSSKLKPNKKLQKKPLKKGSSKQG 328
              K      +  P+ K +  P  +G  ++G
Sbjct: 326 MSQKGKRKGGRQGPSGKRKGGPPGQGEKRKG 336

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BLAST of PI0028822 vs. ExPASy Swiss-Prot
Match: Q2KIH4 (Ribosome biogenesis regulatory protein homolog OS=Bos taurus OX=9913 GN=RRS1 PE=2 SV=1)

HSP 1 Score: 129.4 bits (324), Expect = 7.4e-29
Identity = 112/320 (35.00%), Postives = 172/320 (53.75%), Query Frame = 0


Query: 10  QIDLGHLMAF--NPHHQFPSLPSSREDLVNECLQKGTELVQFIANDLFNLPSTEDRDGPL 69
           + DLG+L+A   NP         ++E  +    +  T+L   + N L+ LP+    +  +
Sbjct: 33  EFDLGNLLASDRNPPTGLRHAGPTQEAELRALARDNTQL---LINQLWQLPTERVEEALV 92

Query: 70  VRLPPPTTRLPREKPLPKPKPPTKWELFAQKKGIKNRKKDKRVYDEQTHTWKRRHGYDRA 129
            RLP P+TRLPREKP+P+P+P T+W+ FA+ KGI+ +KK   V+DE +  W+RR GY RA
Sbjct: 93  ARLPEPSTRLPREKPVPRPRPLTRWQQFARLKGIRPKKKTNLVWDEVSGRWRRRWGYQRA 152

Query: 130 NDEDKIPIIEAKMTDESGEDPFAARQADKKKRVEKQEKNRLQNLKQAAKVGALPSHIQLA 189
            D+ K  +IE     +  ED FA R   KK+RV K E NRL+NL +A K+  LPS     
Sbjct: 153 RDDTKEWLIEVPGNADPMEDQFAKRIQAKKERVAKNELNRLRNLARAHKM-QLPS----- 212

Query: 190 ATALPITGTQAAPKKITKDELGNVAGMAATSTASGGKFDKKFAGEKPAKHQGKYRKFLPV 249
           A  +  TG Q      +K+ELG    +A  STAS G+F ++   EK  +  GK RKF P+
Sbjct: 213 AAGMHPTGHQ------SKEELGRAMQVAKVSTASVGRFQERLPKEKAPRGSGKKRKFQPL 272

Query: 250 VEGTGIGSREREQTEKVLSRLISKNSHEILNVNKAVNMYNVKKEKKQRNQQGKSSSMSSK 309
               G  + ER+   ++L  + SK     +++ +A N   +++E ++   + +  S   K
Sbjct: 273 F---GDFAAERKSQLEMLRVMNSKKPQ--MDITRATNK-QMREEDQEEAAKRRKMSQKGK 331

Query: 310 LKPNKKLQKKPLKKGSSKQG 328
            K  ++      K G+  QG
Sbjct: 333 RKGGRQGPGSKRKGGTPSQG 331

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BLAST of PI0028822 vs. ExPASy Swiss-Prot
Match: A1A5P2 (Ribosome biogenesis regulatory protein homolog OS=Rattus norvegicus OX=10116 GN=Rrs1 PE=2 SV=1)

HSP 1 Score: 128.3 bits (321), Expect = 1.7e-28
Identity = 114/330 (34.55%), Postives = 174/330 (52.73%), Query Frame = 0


Query: 3   IENQHPFQIDLGHLMAF--NPHHQFPSLPSSREDLVNECLQKGTELVQFIANDLFNLPST 62
           +  +   + DLG+L+A   NP         S E  +    +  T+L   + N L+ LP+ 
Sbjct: 26  VHKELELEFDLGNLLASDRNPPTVLRQAGPSPEAELRALARDNTQL---LVNQLWQLPTE 85

Query: 63  EDRDGPLVRLPPPTTRLPREKPLPKPKPPTKWELFAQKKGIKNRKKDKRVYDEQTHTWKR 122
              +  + RLP P TRLPREKPLP+P+P T+W+ FA+ KGI+ +KK   V+DE +  W+R
Sbjct: 86  RVEEAVVARLPEPATRLPREKPLPRPRPLTRWQQFARLKGIRPKKKTNLVWDEVSGQWRR 145

Query: 123 RHGYDRANDEDKIPIIEAKMTDESGEDPFAARQADKKKRVEKQEKNRLQNLKQAAKVGAL 182
           R GY RA D+ K  +IE   + +  ED FA R   KK+RV K E NRL+NL +A K+  +
Sbjct: 146 RWGYKRARDDTKEWLIEVPGSADPMEDQFAKRIRAKKERVAKNELNRLRNLARAHKM-QM 205

Query: 183 PSHIQLAATALPITGTQAAPKKITKDELGNVAGMAATSTASGGKFDKKFAGEKPAKHQGK 242
           PS     +  L  TG Q      +K+ELG    +A  STAS G+F ++   EK  +  GK
Sbjct: 206 PS-----SAGLHPTGHQ------SKEELGRAMQVAKVSTASVGRFQERLPKEKAPRGSGK 265

Query: 243 YRKFLPVVEGTGIGSREREQTEKVLSRLISKNSHEILNVNKAVNMYNVKKEKKQRNQQGK 302
            RKF P+    G  + E++   ++L  + SK     L+V +A N   +++E ++   + +
Sbjct: 266 KRKFQPLF---GDFAAEKKNQLELLRVMNSKKPQ--LDVTRATNK-QMREEDQEEAAKRR 325

Query: 303 SSSMSSKLKPNKKLQKKPLKKGSSKQGKAK 331
             S   K K  ++      K G   QG+ +
Sbjct: 326 KMSQKGKKKGGRQGPSGRRKGGPPSQGEKR 334

[Close]

BLAST of PI0028822 vs. ExPASy TrEMBL
Match: A0A0A0LZY0 (Ribosome biogenesis regulatory protein OS=Cucumis sativus OX=3659 GN=Csa_1G605610 PE=3 SV=1)

HSP 1 Score: 614.4 bits (1583), Expect = 2.8e-172
Identity = 325/330 (98.48%), Postives = 327/330 (99.09%), Query Frame = 0


Query: 1   MEIENQHPFQIDLGHLMAFNPHHQFPSLPSSREDLVNECLQKGTELVQFIANDLFNLPST 60
           MEIENQHPFQIDLGHLMAFNPHHQFPSLPSSREDLV+ECLQKGTELVQ IANDLFNLPST
Sbjct: 1   MEIENQHPFQIDLGHLMAFNPHHQFPSLPSSREDLVSECLQKGTELVQSIANDLFNLPST 60

Query: 61  EDRDGPLVRLPPPTTRLPREKPLPKPKPPTKWELFAQKKGIKNRKKDKRVYDEQTHTWKR 120
           EDRDGPLVRLPPPTTRLPREKPLPKPKPPTKWELFAQKKGIKNRKKDKRVYDEQTHTWKR
Sbjct: 61  EDRDGPLVRLPPPTTRLPREKPLPKPKPPTKWELFAQKKGIKNRKKDKRVYDEQTHTWKR 120

Query: 121 RHGYDRANDEDKIPIIEAKMTDESGEDPFAARQADKKKRVEKQEKNRLQNLKQAAKVGAL 180
           RHGYDRANDED IPIIEAKMTDESGEDPFAAR+ADKKKRVEKQEKNRLQNLKQAAKVGAL
Sbjct: 121 RHGYDRANDEDNIPIIEAKMTDESGEDPFAARRADKKKRVEKQEKNRLQNLKQAAKVGAL 180

Query: 181 PSHIQLAATALPITGTQAAPKKITKDELGNVAGMAATSTASGGKFDKKFAGEKPAKHQGK 240
           PSHIQLAATALPITGTQAAPKKITKDELGNVAGMAATSTASGGKFDKKFAGEKPAKHQGK
Sbjct: 181 PSHIQLAATALPITGTQAAPKKITKDELGNVAGMAATSTASGGKFDKKFAGEKPAKHQGK 240

Query: 241 YRKFLPVVEGTGIGSREREQTEKVLSRLISKNSHEILNVNKAVNMYNVKKEKKQRNQQGK 300
           YRKFLPVVEGTGIGSREREQTEKVLSRLISKNSHEILNVNKAVNMYNVKKEKKQRN QGK
Sbjct: 241 YRKFLPVVEGTGIGSREREQTEKVLSRLISKNSHEILNVNKAVNMYNVKKEKKQRN-QGK 300

Query: 301 SSSMSSKLKPNKKLQKKPLKKGSSKQGKAK 331
           SSSMSSKLKPNKKLQKKPLKKGSSKQGKAK
Sbjct: 301 SSSMSSKLKPNKKLQKKPLKKGSSKQGKAK 329

[Close]

BLAST of PI0028822 vs. ExPASy TrEMBL
Match: A0A5A7TFQ4 (Ribosome biogenesis regulatory protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold824G00350 PE=3 SV=1)

HSP 1 Score: 605.5 bits (1560), Expect = 1.3e-169
Identity = 318/330 (96.36%), Postives = 323/330 (97.88%), Query Frame = 0


Query: 1   MEIENQHPFQIDLGHLMAFNPHHQFPSLPSSREDLVNECLQKGTELVQFIANDLFNLPST 60
           MEIENQHPFQIDLGHLMAFNPHHQFPS+P SRE+L++ECLQKGTELVQ IANDLFNLPST
Sbjct: 1   MEIENQHPFQIDLGHLMAFNPHHQFPSIPPSREELISECLQKGTELVQSIANDLFNLPST 60

Query: 61  EDRDGPLVRLPPPTTRLPREKPLPKPKPPTKWELFAQKKGIKNRKKDKRVYDEQTHTWKR 120
           EDRDGPLVRLPPPTTRLPREKPLPKPKPPTKWELFA KKGIK RKKDKRVYDEQTHTWKR
Sbjct: 61  EDRDGPLVRLPPPTTRLPREKPLPKPKPPTKWELFALKKGIKKRKKDKRVYDEQTHTWKR 120

Query: 121 RHGYDRANDEDKIPIIEAKMTDESGEDPFAARQADKKKRVEKQEKNRLQNLKQAAKVGAL 180
           RHGYDRANDED IPIIEAKMTDESGEDPFAAR+ADKKKRVEKQEKNRLQNLKQAAKVGAL
Sbjct: 121 RHGYDRANDEDNIPIIEAKMTDESGEDPFAARRADKKKRVEKQEKNRLQNLKQAAKVGAL 180

Query: 181 PSHIQLAATALPITGTQAAPKKITKDELGNVAGMAATSTASGGKFDKKFAGEKPAKHQGK 240
           PSHIQLAATALPITGTQAAPKKITKDELGNVAGMAATSTASGGKFDKKFAGEKPAKHQGK
Sbjct: 181 PSHIQLAATALPITGTQAAPKKITKDELGNVAGMAATSTASGGKFDKKFAGEKPAKHQGK 240

Query: 241 YRKFLPVVEGTGIGSREREQTEKVLSRLISKNSHEILNVNKAVNMYNVKKEKKQRNQQGK 300
           YRKFLPVVEGTGIGSREREQTEKVLSRLISKNSHEILNVNKAVNMYNVKKEKKQRNQQGK
Sbjct: 241 YRKFLPVVEGTGIGSREREQTEKVLSRLISKNSHEILNVNKAVNMYNVKKEKKQRNQQGK 300

Query: 301 SSSMSSKLKPNKKLQKKPLKKGSSKQGKAK 331
           SSS SSKLK NKKLQKKPLKKGSSKQGKAK
Sbjct: 301 SSSSSSKLKANKKLQKKPLKKGSSKQGKAK 330

[Close]

BLAST of PI0028822 vs. ExPASy TrEMBL
Match: A0A1S4DY55 (Ribosome biogenesis regulatory protein OS=Cucumis melo OX=3656 GN=LOC103492493 PE=3 SV=1)

HSP 1 Score: 588.6 bits (1516), Expect = 1.7e-164
Identity = 312/330 (94.55%), Postives = 317/330 (96.06%), Query Frame = 0


Query: 1   MEIENQHPFQIDLGHLMAFNPHHQFPSLPSSREDLVNECLQKGTELVQFIANDLFNLPST 60
           MEIENQHPFQIDLGHLMAFNPHHQFPS+P SRE+L++ECLQKGTELVQ IANDLFNLPST
Sbjct: 1   MEIENQHPFQIDLGHLMAFNPHHQFPSIPPSREELISECLQKGTELVQSIANDLFNLPST 60

Query: 61  EDRDGPLVRLPPPTTRLPREKPLPKPKPPTKWELFAQKKGIKNRKKDKRVYDEQTHTWKR 120
           EDRDGPLVRLPPPTTRLPREKPLPKPKPPTKWELFAQ       KKDKRVYDEQ HTWKR
Sbjct: 61  EDRDGPLVRLPPPTTRLPREKPLPKPKPPTKWELFAQ-------KKDKRVYDEQMHTWKR 120

Query: 121 RHGYDRANDEDKIPIIEAKMTDESGEDPFAARQADKKKRVEKQEKNRLQNLKQAAKVGAL 180
           RHGYDRANDED IPIIEAKMTDESGEDPFAAR+ADKKKRVEKQEKNRLQNLKQAAKVGAL
Sbjct: 121 RHGYDRANDEDNIPIIEAKMTDESGEDPFAARRADKKKRVEKQEKNRLQNLKQAAKVGAL 180

Query: 181 PSHIQLAATALPITGTQAAPKKITKDELGNVAGMAATSTASGGKFDKKFAGEKPAKHQGK 240
           PSHIQLAATALPITGTQAAPKKITKDELGNVAGMAATSTASGGKFDKKFAGEKPAKHQGK
Sbjct: 181 PSHIQLAATALPITGTQAAPKKITKDELGNVAGMAATSTASGGKFDKKFAGEKPAKHQGK 240

Query: 241 YRKFLPVVEGTGIGSREREQTEKVLSRLISKNSHEILNVNKAVNMYNVKKEKKQRNQQGK 300
           YRKFLPVVEGTGIGSREREQTEKVLSRLISKNSHEILNVNKAVNMYNVKKEKKQRNQQGK
Sbjct: 241 YRKFLPVVEGTGIGSREREQTEKVLSRLISKNSHEILNVNKAVNMYNVKKEKKQRNQQGK 300

Query: 301 SSSMSSKLKPNKKLQKKPLKKGSSKQGKAK 331
           SSS SSKLK NKKLQKKPLKKGSSKQGKAK
Sbjct: 301 SSSSSSKLKANKKLQKKPLKKGSSKQGKAK 323

[Close]

BLAST of PI0028822 vs. ExPASy TrEMBL
Match: A0A6J1F066 (Ribosome biogenesis regulatory protein OS=Cucurbita moschata OX=3662 GN=LOC111440969 PE=3 SV=1)

HSP 1 Score: 568.5 bits (1464), Expect = 1.8e-158
Identity = 299/331 (90.33%), Postives = 318/331 (96.07%), Query Frame = 0


Query: 1   MEIENQHPFQIDLGHLMAFNPHHQFPSLPSSREDLVNECLQKGTELVQFIANDLFNLPST 60
           ME+ENQ PFQIDLG+LMAFNPHHQ+PSL SSREDLV+ECLQKG EL QFIANDLFNLPST
Sbjct: 1   MEMENQQPFQIDLGNLMAFNPHHQYPSLSSSREDLVSECLQKGAELAQFIANDLFNLPST 60

Query: 61  EDRDGPLVRLPPPTTRLPREKPLPKPKPPTKWELFAQKKGIKNRKKDKRVYDEQTHTWKR 120
           EDRDGPLVRLPPP+TRLPREKPLPKPKPPTKWELFA+K+GIKNRKKDK VYD+QT +WKR
Sbjct: 61  EDRDGPLVRLPPPSTRLPREKPLPKPKPPTKWELFAKKRGIKNRKKDKIVYDDQTGSWKR 120

Query: 121 RHGYDRANDEDKIPIIEAKMTDESGEDPFAARQADKKKRVEKQEKNRLQNLKQAAKVGAL 180
           RHGYDRANDE+ IPIIEAKMTDE G DPFAAR+A+KK RVEKQE+N+LQNLKQAAKVGAL
Sbjct: 121 RHGYDRANDEENIPIIEAKMTDEPGVDPFAARRANKKNRVEKQERNQLQNLKQAAKVGAL 180

Query: 181 PSHIQLAATALPITGTQAAPKKITKDELGNVAGMAATSTASGGKFDKKFAGEKPAKHQGK 240
           PSH+QLAATALPITGTQAAPKKITKDELGNVAGMAATSTASGGKFDKK AGEKPAKHQGK
Sbjct: 181 PSHVQLAATALPITGTQAAPKKITKDELGNVAGMAATSTASGGKFDKKLAGEKPAKHQGK 240

Query: 241 YRKFLPVVEGTGIGSREREQTEKVLSRLISKNSHEILNVNKAVNMYNVKKEKKQRNQQGK 300
           YRKFLPVVEGTGIGS+EREQTEKVL+RLISKNSHEILN+NKAVNMYNVKKEKKQRNQ+GK
Sbjct: 241 YRKFLPVVEGTGIGSQEREQTEKVLNRLISKNSHEILNINKAVNMYNVKKEKKQRNQRGK 300

Query: 301 SSSMSS-KLKPNKKLQKKPLKKGSSKQGKAK 331
           SSSMSS KLKPNKKLQKKPLKKGSSK GKAK
Sbjct: 301 SSSMSSNKLKPNKKLQKKPLKKGSSKNGKAK 331

[Close]

BLAST of PI0028822 vs. ExPASy TrEMBL
Match: A0A6J1HW20 (Ribosome biogenesis regulatory protein OS=Cucurbita maxima OX=3661 GN=LOC111467179 PE=3 SV=1)

HSP 1 Score: 568.2 bits (1463), Expect = 2.3e-158
Identity = 299/331 (90.33%), Postives = 318/331 (96.07%), Query Frame = 0


Query: 1   MEIENQHPFQIDLGHLMAFNPHHQFPSLPSSREDLVNECLQKGTELVQFIANDLFNLPST 60
           ME+ENQ PFQIDLG+LMAFNPHH+FPSL SSREDLV+ECLQKG EL QFIANDLFNLPST
Sbjct: 1   MEMENQQPFQIDLGNLMAFNPHHKFPSLSSSREDLVSECLQKGAELAQFIANDLFNLPST 60

Query: 61  EDRDGPLVRLPPPTTRLPREKPLPKPKPPTKWELFAQKKGIKNRKKDKRVYDEQTHTWKR 120
           EDRDGPLVRLPPP+TRLPREKPLPKPKPPTKWELFA+K+GIKNRKKDK VYD+QT +WKR
Sbjct: 61  EDRDGPLVRLPPPSTRLPREKPLPKPKPPTKWELFAKKRGIKNRKKDKIVYDDQTGSWKR 120

Query: 121 RHGYDRANDEDKIPIIEAKMTDESGEDPFAARQADKKKRVEKQEKNRLQNLKQAAKVGAL 180
           RHGYDRANDE+ IPIIEAKMTDE G DPFAAR+A+KK RVEKQE+N+LQNLKQAAKVGAL
Sbjct: 121 RHGYDRANDEENIPIIEAKMTDEPGVDPFAARRANKKNRVEKQERNQLQNLKQAAKVGAL 180

Query: 181 PSHIQLAATALPITGTQAAPKKITKDELGNVAGMAATSTASGGKFDKKFAGEKPAKHQGK 240
           PSH+QLAATALPITGTQAAPKKITKDELGNVAGMAATSTASGGKFDKK AGEKPAKHQGK
Sbjct: 181 PSHVQLAATALPITGTQAAPKKITKDELGNVAGMAATSTASGGKFDKKLAGEKPAKHQGK 240

Query: 241 YRKFLPVVEGTGIGSREREQTEKVLSRLISKNSHEILNVNKAVNMYNVKKEKKQRNQQGK 300
           YRKFLPVVEGTGIGS+EREQTEKVL+RLISKNSHEILN+NKAVNMYNVKKEKKQRNQ+GK
Sbjct: 241 YRKFLPVVEGTGIGSQEREQTEKVLNRLISKNSHEILNINKAVNMYNVKKEKKQRNQRGK 300

Query: 301 SSSMSS-KLKPNKKLQKKPLKKGSSKQGKAK 331
           SSSMSS KLKPNKKLQKKPLKKGSSK GKAK
Sbjct: 301 SSSMSSNKLKPNKKLQKKPLKKGSSKNGKAK 331

[Close]

BLAST of PI0028822 vs. NCBI nr
Match: XP_004149022.1 (ribosome biogenesis regulatory protein homolog [Cucumis sativus] >KGN66432.1 hypothetical protein Csa_007676 [Cucumis sativus])

HSP 1 Score: 614.4 bits (1583), Expect = 5.8e-172
Identity = 325/330 (98.48%), Postives = 327/330 (99.09%), Query Frame = 0


Query: 1   MEIENQHPFQIDLGHLMAFNPHHQFPSLPSSREDLVNECLQKGTELVQFIANDLFNLPST 60
           MEIENQHPFQIDLGHLMAFNPHHQFPSLPSSREDLV+ECLQKGTELVQ IANDLFNLPST
Sbjct: 1   MEIENQHPFQIDLGHLMAFNPHHQFPSLPSSREDLVSECLQKGTELVQSIANDLFNLPST 60

Query: 61  EDRDGPLVRLPPPTTRLPREKPLPKPKPPTKWELFAQKKGIKNRKKDKRVYDEQTHTWKR 120
           EDRDGPLVRLPPPTTRLPREKPLPKPKPPTKWELFAQKKGIKNRKKDKRVYDEQTHTWKR
Sbjct: 61  EDRDGPLVRLPPPTTRLPREKPLPKPKPPTKWELFAQKKGIKNRKKDKRVYDEQTHTWKR 120

Query: 121 RHGYDRANDEDKIPIIEAKMTDESGEDPFAARQADKKKRVEKQEKNRLQNLKQAAKVGAL 180
           RHGYDRANDED IPIIEAKMTDESGEDPFAAR+ADKKKRVEKQEKNRLQNLKQAAKVGAL
Sbjct: 121 RHGYDRANDEDNIPIIEAKMTDESGEDPFAARRADKKKRVEKQEKNRLQNLKQAAKVGAL 180

Query: 181 PSHIQLAATALPITGTQAAPKKITKDELGNVAGMAATSTASGGKFDKKFAGEKPAKHQGK 240
           PSHIQLAATALPITGTQAAPKKITKDELGNVAGMAATSTASGGKFDKKFAGEKPAKHQGK
Sbjct: 181 PSHIQLAATALPITGTQAAPKKITKDELGNVAGMAATSTASGGKFDKKFAGEKPAKHQGK 240

Query: 241 YRKFLPVVEGTGIGSREREQTEKVLSRLISKNSHEILNVNKAVNMYNVKKEKKQRNQQGK 300
           YRKFLPVVEGTGIGSREREQTEKVLSRLISKNSHEILNVNKAVNMYNVKKEKKQRN QGK
Sbjct: 241 YRKFLPVVEGTGIGSREREQTEKVLSRLISKNSHEILNVNKAVNMYNVKKEKKQRN-QGK 300

Query: 301 SSSMSSKLKPNKKLQKKPLKKGSSKQGKAK 331
           SSSMSSKLKPNKKLQKKPLKKGSSKQGKAK
Sbjct: 301 SSSMSSKLKPNKKLQKKPLKKGSSKQGKAK 329

[Close]

BLAST of PI0028822 vs. NCBI nr
Match: KAA0042254.1 (ribosome biogenesis regulatory protein-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 605.5 bits (1560), Expect = 2.7e-169
Identity = 318/330 (96.36%), Postives = 323/330 (97.88%), Query Frame = 0


Query: 1   MEIENQHPFQIDLGHLMAFNPHHQFPSLPSSREDLVNECLQKGTELVQFIANDLFNLPST 60
           MEIENQHPFQIDLGHLMAFNPHHQFPS+P SRE+L++ECLQKGTELVQ IANDLFNLPST
Sbjct: 1   MEIENQHPFQIDLGHLMAFNPHHQFPSIPPSREELISECLQKGTELVQSIANDLFNLPST 60

Query: 61  EDRDGPLVRLPPPTTRLPREKPLPKPKPPTKWELFAQKKGIKNRKKDKRVYDEQTHTWKR 120
           EDRDGPLVRLPPPTTRLPREKPLPKPKPPTKWELFA KKGIK RKKDKRVYDEQTHTWKR
Sbjct: 61  EDRDGPLVRLPPPTTRLPREKPLPKPKPPTKWELFALKKGIKKRKKDKRVYDEQTHTWKR 120

Query: 121 RHGYDRANDEDKIPIIEAKMTDESGEDPFAARQADKKKRVEKQEKNRLQNLKQAAKVGAL 180
           RHGYDRANDED IPIIEAKMTDESGEDPFAAR+ADKKKRVEKQEKNRLQNLKQAAKVGAL
Sbjct: 121 RHGYDRANDEDNIPIIEAKMTDESGEDPFAARRADKKKRVEKQEKNRLQNLKQAAKVGAL 180

Query: 181 PSHIQLAATALPITGTQAAPKKITKDELGNVAGMAATSTASGGKFDKKFAGEKPAKHQGK 240
           PSHIQLAATALPITGTQAAPKKITKDELGNVAGMAATSTASGGKFDKKFAGEKPAKHQGK
Sbjct: 181 PSHIQLAATALPITGTQAAPKKITKDELGNVAGMAATSTASGGKFDKKFAGEKPAKHQGK 240

Query: 241 YRKFLPVVEGTGIGSREREQTEKVLSRLISKNSHEILNVNKAVNMYNVKKEKKQRNQQGK 300
           YRKFLPVVEGTGIGSREREQTEKVLSRLISKNSHEILNVNKAVNMYNVKKEKKQRNQQGK
Sbjct: 241 YRKFLPVVEGTGIGSREREQTEKVLSRLISKNSHEILNVNKAVNMYNVKKEKKQRNQQGK 300

Query: 301 SSSMSSKLKPNKKLQKKPLKKGSSKQGKAK 331
           SSS SSKLK NKKLQKKPLKKGSSKQGKAK
Sbjct: 301 SSSSSSKLKANKKLQKKPLKKGSSKQGKAK 330

[Close]

BLAST of PI0028822 vs. NCBI nr
Match: XP_038878495.1 (ribosome biogenesis regulatory protein homolog [Benincasa hispida])

HSP 1 Score: 593.2 bits (1528), Expect = 1.4e-165
Identity = 310/330 (93.94%), Postives = 321/330 (97.27%), Query Frame = 0


Query: 1   MEIENQHPFQIDLGHLMAFNPHHQFPSLPSSREDLVNECLQKGTELVQFIANDLFNLPST 60
           MEIENQHPFQ+DLG+LMAFNPHH FPSLPSSRE+LVNECLQKGTELVQFIANDLFNLPST
Sbjct: 1   MEIENQHPFQVDLGNLMAFNPHHHFPSLPSSREELVNECLQKGTELVQFIANDLFNLPST 60

Query: 61  EDRDGPLVRLPPPTTRLPREKPLPKPKPPTKWELFAQKKGIKNRKKDKRVYDEQTHTWKR 120
           EDRDGPLV+LPPPTTRLPREKPLPKPKPPTKWELFAQKKGIK RKKDKRVYDEQ  TWKR
Sbjct: 61  EDRDGPLVKLPPPTTRLPREKPLPKPKPPTKWELFAQKKGIKKRKKDKRVYDEQAGTWKR 120

Query: 121 RHGYDRANDEDKIPIIEAKMTDESGEDPFAARQADKKKRVEKQEKNRLQNLKQAAKVGAL 180
           RHGYDRANDE+ IPIIEAKMTDE GEDPFAAR+ADKKKRVEKQEKNRLQNLKQAAKVGAL
Sbjct: 121 RHGYDRANDEENIPIIEAKMTDEPGEDPFAARRADKKKRVEKQEKNRLQNLKQAAKVGAL 180

Query: 181 PSHIQLAATALPITGTQAAPKKITKDELGNVAGMAATSTASGGKFDKKFAGEKPAKHQGK 240
           PSHIQLAATALPITGTQAAPKKITKDELGNVAGMAATSTASGGKFDKK  GEKPAKHQGK
Sbjct: 181 PSHIQLAATALPITGTQAAPKKITKDELGNVAGMAATSTASGGKFDKKLTGEKPAKHQGK 240

Query: 241 YRKFLPVVEGTGIGSREREQTEKVLSRLISKNSHEILNVNKAVNMYNVKKEKKQRNQQGK 300
           YRKFLPVVEGTGIGS+E+EQTEKVL+RLISKNSHEILNV+KAVNMYNVKKEKKQRNQ+GK
Sbjct: 241 YRKFLPVVEGTGIGSQEKEQTEKVLNRLISKNSHEILNVSKAVNMYNVKKEKKQRNQRGK 300

Query: 301 SSSMSSKLKPNKKLQKKPLKKGSSKQGKAK 331
           SSSMSSKLKPNKKLQKKPLKKGSSK GKAK
Sbjct: 301 SSSMSSKLKPNKKLQKKPLKKGSSKHGKAK 330

[Close]

BLAST of PI0028822 vs. NCBI nr
Match: XP_016900912.1 (PREDICTED: ribosome biogenesis regulatory protein homolog [Cucumis melo])

HSP 1 Score: 588.6 bits (1516), Expect = 3.4e-164
Identity = 312/330 (94.55%), Postives = 317/330 (96.06%), Query Frame = 0


Query: 1   MEIENQHPFQIDLGHLMAFNPHHQFPSLPSSREDLVNECLQKGTELVQFIANDLFNLPST 60
           MEIENQHPFQIDLGHLMAFNPHHQFPS+P SRE+L++ECLQKGTELVQ IANDLFNLPST
Sbjct: 1   MEIENQHPFQIDLGHLMAFNPHHQFPSIPPSREELISECLQKGTELVQSIANDLFNLPST 60

Query: 61  EDRDGPLVRLPPPTTRLPREKPLPKPKPPTKWELFAQKKGIKNRKKDKRVYDEQTHTWKR 120
           EDRDGPLVRLPPPTTRLPREKPLPKPKPPTKWELFAQ       KKDKRVYDEQ HTWKR
Sbjct: 61  EDRDGPLVRLPPPTTRLPREKPLPKPKPPTKWELFAQ-------KKDKRVYDEQMHTWKR 120

Query: 121 RHGYDRANDEDKIPIIEAKMTDESGEDPFAARQADKKKRVEKQEKNRLQNLKQAAKVGAL 180
           RHGYDRANDED IPIIEAKMTDESGEDPFAAR+ADKKKRVEKQEKNRLQNLKQAAKVGAL
Sbjct: 121 RHGYDRANDEDNIPIIEAKMTDESGEDPFAARRADKKKRVEKQEKNRLQNLKQAAKVGAL 180

Query: 181 PSHIQLAATALPITGTQAAPKKITKDELGNVAGMAATSTASGGKFDKKFAGEKPAKHQGK 240
           PSHIQLAATALPITGTQAAPKKITKDELGNVAGMAATSTASGGKFDKKFAGEKPAKHQGK
Sbjct: 181 PSHIQLAATALPITGTQAAPKKITKDELGNVAGMAATSTASGGKFDKKFAGEKPAKHQGK 240

Query: 241 YRKFLPVVEGTGIGSREREQTEKVLSRLISKNSHEILNVNKAVNMYNVKKEKKQRNQQGK 300
           YRKFLPVVEGTGIGSREREQTEKVLSRLISKNSHEILNVNKAVNMYNVKKEKKQRNQQGK
Sbjct: 241 YRKFLPVVEGTGIGSREREQTEKVLSRLISKNSHEILNVNKAVNMYNVKKEKKQRNQQGK 300

Query: 301 SSSMSSKLKPNKKLQKKPLKKGSSKQGKAK 331
           SSS SSKLK NKKLQKKPLKKGSSKQGKAK
Sbjct: 301 SSSSSSKLKANKKLQKKPLKKGSSKQGKAK 323

[Close]

BLAST of PI0028822 vs. NCBI nr
Match: XP_022933585.1 (ribosome biogenesis regulatory protein homolog [Cucurbita moschata] >XP_022933586.1 ribosome biogenesis regulatory protein homolog [Cucurbita moschata] >XP_022933587.1 ribosome biogenesis regulatory protein homolog [Cucurbita moschata] >KAG6588164.1 Ribosome biogenesis regulatory protein-like protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 568.5 bits (1464), Expect = 3.7e-158
Identity = 299/331 (90.33%), Postives = 318/331 (96.07%), Query Frame = 0


Query: 1   MEIENQHPFQIDLGHLMAFNPHHQFPSLPSSREDLVNECLQKGTELVQFIANDLFNLPST 60
           ME+ENQ PFQIDLG+LMAFNPHHQ+PSL SSREDLV+ECLQKG EL QFIANDLFNLPST
Sbjct: 1   MEMENQQPFQIDLGNLMAFNPHHQYPSLSSSREDLVSECLQKGAELAQFIANDLFNLPST 60

Query: 61  EDRDGPLVRLPPPTTRLPREKPLPKPKPPTKWELFAQKKGIKNRKKDKRVYDEQTHTWKR 120
           EDRDGPLVRLPPP+TRLPREKPLPKPKPPTKWELFA+K+GIKNRKKDK VYD+QT +WKR
Sbjct: 61  EDRDGPLVRLPPPSTRLPREKPLPKPKPPTKWELFAKKRGIKNRKKDKIVYDDQTGSWKR 120

Query: 121 RHGYDRANDEDKIPIIEAKMTDESGEDPFAARQADKKKRVEKQEKNRLQNLKQAAKVGAL 180
           RHGYDRANDE+ IPIIEAKMTDE G DPFAAR+A+KK RVEKQE+N+LQNLKQAAKVGAL
Sbjct: 121 RHGYDRANDEENIPIIEAKMTDEPGVDPFAARRANKKNRVEKQERNQLQNLKQAAKVGAL 180

Query: 181 PSHIQLAATALPITGTQAAPKKITKDELGNVAGMAATSTASGGKFDKKFAGEKPAKHQGK 240
           PSH+QLAATALPITGTQAAPKKITKDELGNVAGMAATSTASGGKFDKK AGEKPAKHQGK
Sbjct: 181 PSHVQLAATALPITGTQAAPKKITKDELGNVAGMAATSTASGGKFDKKLAGEKPAKHQGK 240

Query: 241 YRKFLPVVEGTGIGSREREQTEKVLSRLISKNSHEILNVNKAVNMYNVKKEKKQRNQQGK 300
           YRKFLPVVEGTGIGS+EREQTEKVL+RLISKNSHEILN+NKAVNMYNVKKEKKQRNQ+GK
Sbjct: 241 YRKFLPVVEGTGIGSQEREQTEKVLNRLISKNSHEILNINKAVNMYNVKKEKKQRNQRGK 300

Query: 301 SSSMSS-KLKPNKKLQKKPLKKGSSKQGKAK 331
           SSSMSS KLKPNKKLQKKPLKKGSSK GKAK
Sbjct: 301 SSSMSSNKLKPNKKLQKKPLKKGSSKNGKAK 331

[Close]

BLAST of PI0028822 vs. TAIR 10
Match: AT2G37990.1 (ribosome biogenesis regulatory protein (RRS1) family protein )

HSP 1 Score: 404.8 bits (1039), Expect = 6.5e-113
Identity = 216/320 (67.50%), Postives = 258/320 (80.62%), Query Frame = 0


Query: 2   EIENQHPFQIDLGHLMAFNPHHQFPSLPSSREDLVNECLQKGTELVQFIANDLFNLPSTE 61
           E+E +  +Q+D+G+L+AFNP+H+FPS PSSR +LV E L +GT+LVQ IAN LFN PSTE
Sbjct: 4   EMETEQIYQVDVGNLLAFNPNHRFPSAPSSRGELVKEILTEGTKLVQEIANKLFNFPSTE 63

Query: 62  DRDGPLVRLPPPTTRLPREKPLPKPKPPTKWELFAQKKGIKNRKKDKRVYDEQTHTWKRR 121
             DGP+V+LPPPTT+LPREK +P+PKPPTKWE FA KKGI+ RKK+K V+DEQT+ +KRR
Sbjct: 64  TNDGPIVQLPPPTTKLPREKHIPRPKPPTKWEEFALKKGIQKRKKEKVVWDEQTNQFKRR 123

Query: 122 HGYDRANDEDKIPIIEAKMTDESGEDPFAARQADKKKRVEKQEKNRLQNLKQAAKVGALP 181
           HGYDR ND++ +PIIEAK +DE G DPFA R  DKKKRV KQEKNRLQNLK A K GALP
Sbjct: 124 HGYDRVNDDNDVPIIEAKESDEPGVDPFAKRLDDKKKRVGKQEKNRLQNLKAAEKAGALP 183

Query: 182 SHIQLAATALPITGTQAAPKKITKDELGNVAGMAATSTASGGKFDKKFAGEKPAKHQGKY 241
           SH+QLAAT+LPI+GT+A PKKI KDELG+VAG+AATSTASGGKFDKK  GEKP K QGK+
Sbjct: 184 SHVQLAATSLPISGTKAQPKKIGKDELGDVAGLAATSTASGGKFDKKLPGEKPPKKQGKH 243

Query: 242 RKFLPVVEGTGIGSREREQTEKVLSRLISKNSHEILNVNKAVNMYNVKKEKKQRNQQGKS 301
            K+LPVV G G  + E+EQT  VLS++ SK+SHEILNV KA+NMYNVKKEKK+       
Sbjct: 244 HKYLPVVSGRGDVNAEKEQTNNVLSKIFSKHSHEILNVGKAINMYNVKKEKKK------- 303

Query: 302 SSMSSKLKPNKKLQKKPLKK 322
           S  S KLKP K + KKP  K
Sbjct: 304 SGRSDKLKPKKDITKKPANK 316

The following BLAST results are available for this feature:

BLAST of PI0028822 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SH88	9.2e-112	67.50	Ribosome biogenesis regulatory protein homolog OS=Arabidopsis thaliana OX=3702 G...	[more]
Q15050	1.1e-29	35.35	Ribosome biogenesis regulatory protein homolog OS=Homo sapiens OX=9606 GN=RRS1 P...	[more]
Q9CYH6	3.3e-29	34.44	Ribosome biogenesis regulatory protein homolog OS=Mus musculus OX=10090 GN=Rrs1 ...	[more]
Q2KIH4	7.4e-29	35.00	Ribosome biogenesis regulatory protein homolog OS=Bos taurus OX=9913 GN=RRS1 PE=...	[more]
A1A5P2	1.7e-28	34.55	Ribosome biogenesis regulatory protein homolog OS=Rattus norvegicus OX=10116 GN=...	[more]

BLAST of PI0028822 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LZY0	2.8e-172	98.48	Ribosome biogenesis regulatory protein OS=Cucumis sativus OX=3659 GN=Csa_1G60561...	[more]
A0A5A7TFQ4	1.3e-169	96.36	Ribosome biogenesis regulatory protein OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]
A0A1S4DY55	1.7e-164	94.55	Ribosome biogenesis regulatory protein OS=Cucumis melo OX=3656 GN=LOC103492493 P...	[more]
A0A6J1F066	1.8e-158	90.33	Ribosome biogenesis regulatory protein OS=Cucurbita moschata OX=3662 GN=LOC11144...	[more]
A0A6J1HW20	2.3e-158	90.33	Ribosome biogenesis regulatory protein OS=Cucurbita maxima OX=3661 GN=LOC1114671...	[more]

BLAST of PI0028822 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004149022.1	5.8e-172	98.48	ribosome biogenesis regulatory protein homolog [Cucumis sativus] >KGN66432.1 hyp...	[more]
KAA0042254.1	2.7e-169	96.36	ribosome biogenesis regulatory protein-like protein [Cucumis melo var. makuwa]	[more]
XP_038878495.1	1.4e-165	93.94	ribosome biogenesis regulatory protein homolog [Benincasa hispida]	[more]
XP_016900912.1	3.4e-164	94.55	PREDICTED: ribosome biogenesis regulatory protein homolog [Cucumis melo]	[more]
XP_022933585.1	3.7e-158	90.33	ribosome biogenesis regulatory protein homolog [Cucurbita moschata] >XP_02293358...	[more]

BLAST of PI0028822 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G37990.1	6.5e-113	67.50	ribosome biogenesis regulatory protein (RRS1) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 151..174
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 217..238
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 310..330
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 60..89
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 288..330
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 140..159
None	No IPR available	PANTHER	PTHR17602:SF5	RIBOSOME BIOGENESIS REGULATORY PROTEIN	coord: 1..319
IPR007023	Ribosomal biogenesis regulatory protein	PFAM	PF04939	RRS1	coord: 8..171 e-value: 2.3E-54 score: 183.7
IPR007023	Ribosomal biogenesis regulatory protein	PANTHER	PTHR17602	RIBOSOME BIOGENESIS REGULATORY PROTEIN	coord: 1..319

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0028822.1	PI0028822.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000447	endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
biological_process	GO:0042273	ribosomal large subunit biogenesis
biological_process	GO:0000055	ribosomal large subunit export from nucleus
biological_process	GO:0042254	ribosome biogenesis
cellular_component	GO:0005730	nucleolus
cellular_component	GO:0030687	preribosome, large subunit precursor
cellular_component	GO:0005634	nucleus