PI0028810 (gene) Melon (PI 482460) v1

Overview
NamePI0028810
Typegene
OrganismCucumis metuliferus (Melon (PI 482460) v1)
DescriptionUnknown protein
Locationchr04: 13839724 .. 13840167 (+)
RNA-Seq ExpressionPI0028810
SyntenyPI0028810
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATTGTGGAACTCCGGATGGTTCCAGTTATTCTGCTGGTGCTGATGCTGGTACGGCTGCTGGTGCTGGTGCTGGTGCTGGTGAGGTGGCGGGGGCGGGGGCGGGGGCTGGGGCTGGGGCTGGGGATGGTGCTGAGGCTGGAACGGAGGCTGGTGCTGCGTAGGGGGCGGAGGAGGAGGAGGTGGTGGATGGGGGGGGTACTGAGGAGGATAATTGGGCTGGCCAAAAGGGGGCCCGGGATGGTGATTGGGGTATTGAACATAGGGATCAAACTGGTGACTGAAATTGGGTCGTCGGTCGTCGGAAGGCCAAGAGGGTGCGGAGGAAGAAGGGTGGTGCCTCTCCAGTTTTGCAGAATTGGAATGGAACAACAAAAATTAAGTGGAGGCGTGAGAATGATGGGGCGATTGAGGATGGAAGAAGAAGAGAAAGGAGGGAGGTGA

mRNA sequence

ATGATTGTGGAACTCCGGATGGTTCCAGTTATTCTGCTGGTGCTGATGCTGGTACGGCTGCTGGTGCTGGTGCTGGTGCTGGTGAGGTGGTGGATGGGGGGGGTACTGAGGAGGATAATTGGGCTGGCCAAAAGGGGGCCCGGGATGGTGATTGGGGTATTGAACATAGGGATCAAACTGGTGACTGAAATTGGGTCGTCGGTCGTCGGAAGGCCAAGAGGGTGCGGAGGAAGAAGGGTGGTGCCTCTCCAGTTTTGCAGAATTGGAATGGAACAACAAAAATTAAGTGGAGGCGTGAGAATGATGGGGCGATTGAGGATGGAAGAAGAAGAGAAAGGAGGGAGGTGA

Coding sequence (CDS)

ATGATTGTGGAACTCCGGATGGTTCCAGTTATTCTGCTGGTGCTGATGCTGGTACGGCTGCTGGTGCTGGTGCTGGTGCTGGTGAGGTGGTGGATGGGGGGGGTACTGAGGAGGATAATTGGGCTGGCCAAAAGGGGGCCCGGGATGGTGATTGGGGTATTGAACATAGGGATCAAACTGGTGACTGAAATTGGGTCGTCGGTCGTCGGAAGGCCAAGAGGGTGCGGAGGAAGAAGGGTGGTGCCTCTCCAGTTTTGCAGAATTGGAATGGAACAACAAAAATTAAGTGGAGGCGTGAGAATGATGGGGCGATTGAGGATGGAAGAAGAAGAGAAAGGAGGGAGGTGA

Protein sequence

MIVELRMVPVILLVLMLVRLLVLVLVLVRWWMGGVLRRIIGLAKRGPGMVIGVLNIGIKLVTEIGSSVVGRPRGCGGRRVVPLQFCRIGMEQQKLSGGVRMMGRLRMEEEEKGGR
Homology
[Close]
BLAST of PI0028810 vs. ExPASy TrEMBL
Match: A0A0A0LDH3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G535640 PE=4 SV=1)

HSP 1 Score: 128.6 bits (322), Expect = 1.6e-26
Identity = 86/121 (71.07%), Postives = 95/121 (78.51%), Query Frame = 0 

Query: 1   MIVELRMVPVILLVLMLVRLLVLVLVLVRWWMGGVLRRIIGLAKRGPGMVIGVLNIGIKL 60
           MIVELRMVPVI+LVLML+ + VLV          VLR IIG+ KRGPGMVIGVLNIGIKL
Sbjct: 1   MIVELRMVPVIVLVLMLMLVGVLV---------SVLRGIIGVDKRGPGMVIGVLNIGIKL 60

Query: 61  VTEIGSSVVGRPRGCGGRRVVPLQFCRIGMEQ--QKLSGGVRMMGRLRM----EEEEKGG 116
           V EIGSSVVGRPR CGGRRVVPLQFCR GMEQ  ++  GG+RM+ RLRM    EEEE+GG
Sbjct: 61  VIEIGSSVVGRPRRCGGRRVVPLQFCRKGMEQEEEEKGGGLRMIRRLRMEEEEEEEEEGG 112

[Close]
BLAST of PI0028810 vs. NCBI nr
Match: KAE8650755.1 (hypothetical protein Csa_023869, partial [Cucumis sativus])

HSP 1 Score: 105.5 bits (262), Expect = 3.1e-19
Identity = 58/78 (74.36%), Postives = 65/78 (83.33%), Query Frame = 0 

Query: 44  KRGPGMVIGVLNIGIKLVTEIGSSVVGRPRGCGGRRVVPLQFCRIGMEQ--QKLSGGVRM 103
           ++G GMVIGVLNIGIKLV EIGSSVVGRPR CGGRRVVPLQFCR GMEQ  ++  GG+RM
Sbjct: 34  QKGAGMVIGVLNIGIKLVIEIGSSVVGRPRRCGGRRVVPLQFCRKGMEQEEEEKGGGLRM 93

Query: 104 MGRLRM----EEEEKGGR 116
           + RLRM    EEEE+GGR
Sbjct: 94  IRRLRMEEEEEEEEEGGR 111

The following BLAST results are available for this feature:
BLAST of PI0028810 vs.
Match NameE-valueIdentityDescription
BLAST of PI0028810 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LDH31.6e-2671.07Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G535640 PE=4 SV=1[more]
BLAST of PI0028810 vs. NCBI nr
Match NameE-valueIdentityDescription
KAE8650755.13.1e-1974.36hypothetical protein Csa_023869, partial [Cucumis sativus][more]
BLAST of PI0028810 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
PI0028810.1PI0028810.1mRNA