PI0028767 (gene) Melon (PI 482460) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTTTTGTCATTCTATTCATCTACTTAGGACGACCAATGAATTAGAGTCAACGAAAGTCATAGATGTGGAGGAGATGGTTGCCATGTTCCTCCATGTACTAGCACATGATGTGAAGAATCGAATAATTCAAAGGGAGTTTGTGCGGTCCGACGAGACAATTTCTAGACATTTCAACATTGTCCTCTTGGCAATTTTGCGATTGCATGACGAGTTGTTGAAAAAGCTGTAG ATGTTTTGTCATTCTATTCATCTACTTAGGACGACCAATGAATTAGAGTCAACGAAAGTCATAGATGTGGAGGAGATGGTTGCCATGTTCCTCCATGTACTAGCACATGATGTGAAGAATCGAATAATTCAAAGGGAGTTTGTGCGGTCCGACGAGACAATTTCTAGACATTTCAACATTGTCCTCTTGGCAATTTTGCGATTGCATGACGAGTTGTTGAAAAAGCTGTAG ATGTTTTGTCATTCTATTCATCTACTTAGGACGACCAATGAATTAGAGTCAACGAAAGTCATAGATGTGGAGGAGATGGTTGCCATGTTCCTCCATGTACTAGCACATGATGTGAAGAATCGAATAATTCAAAGGGAGTTTGTGCGGTCCGACGAGACAATTTCTAGACATTTCAACATTGTCCTCTTGGCAATTTTGCGATTGCATGACGAGTTGTTGAAAAAGCTGTAG MFCHSIHLLRTTNELESTKVIDVEEMVAMFLHVLAHDVKNRIIQREFVRSDETISRHFNIVLLAILRLHDELLKKL Homology
BLAST of PI0028767 vs. ExPASy TrEMBL
Match: A0A5D3CQK6 (Putative nuclease HARBI1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold556G00100 PE=3 SV=1) HSP 1 Score: 117.5 bits (293), Expect = 2.5e-23 Identity = 59/69 (85.51%), Postives = 64/69 (92.75%), Query Frame = 0
BLAST of PI0028767 vs. ExPASy TrEMBL
Match: A0A1S3CRU3 (uncharacterized protein LOC103504027 OS=Cucumis melo OX=3656 GN=LOC103504027 PE=3 SV=1) HSP 1 Score: 117.5 bits (293), Expect = 2.5e-23 Identity = 59/69 (85.51%), Postives = 64/69 (92.75%), Query Frame = 0
BLAST of PI0028767 vs. ExPASy TrEMBL
Match: A0A5D3D9Z3 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold519G00220 PE=3 SV=1) HSP 1 Score: 114.4 bits (285), Expect = 2.1e-22 Identity = 56/69 (81.16%), Postives = 64/69 (92.75%), Query Frame = 0
BLAST of PI0028767 vs. ExPASy TrEMBL
Match: A0A5A7SVX3 (Putative nuclease HARBI1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold862G00330 PE=4 SV=1) HSP 1 Score: 114.4 bits (285), Expect = 2.1e-22 Identity = 58/70 (82.86%), Postives = 65/70 (92.86%), Query Frame = 0
BLAST of PI0028767 vs. ExPASy TrEMBL
Match: A0A5A7V0W7 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold571G00580 PE=4 SV=1) HSP 1 Score: 114.4 bits (285), Expect = 2.1e-22 Identity = 56/69 (81.16%), Postives = 64/69 (92.75%), Query Frame = 0
BLAST of PI0028767 vs. NCBI nr
Match: XP_008466673.1 (PREDICTED: uncharacterized protein LOC103504027 [Cucumis melo] >KAA0063228.1 putative nuclease HARBI1 [Cucumis melo var. makuwa] >TYK13478.1 putative nuclease HARBI1 [Cucumis melo var. makuwa]) HSP 1 Score: 117.5 bits (293), Expect = 5.1e-23 Identity = 59/69 (85.51%), Postives = 64/69 (92.75%), Query Frame = 0
BLAST of PI0028767 vs. NCBI nr
Match: KAA0054554.1 (retrotransposon protein [Cucumis melo var. makuwa] >TYK20397.1 retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 114.4 bits (285), Expect = 4.3e-22 Identity = 56/69 (81.16%), Postives = 64/69 (92.75%), Query Frame = 0
BLAST of PI0028767 vs. NCBI nr
Match: KAA0035412.1 (putative nuclease HARBI1 [Cucumis melo var. makuwa] >TYK25739.1 putative nuclease HARBI1 [Cucumis melo var. makuwa]) HSP 1 Score: 114.4 bits (285), Expect = 4.3e-22 Identity = 58/70 (82.86%), Postives = 65/70 (92.86%), Query Frame = 0
BLAST of PI0028767 vs. NCBI nr
Match: KAA0061842.1 (retrotransposon protein [Cucumis melo var. makuwa] >TYK15414.1 retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 114.4 bits (285), Expect = 4.3e-22 Identity = 56/69 (81.16%), Postives = 64/69 (92.75%), Query Frame = 0
BLAST of PI0028767 vs. NCBI nr
Match: KAA0035627.1 (retrotransposon protein [Cucumis melo var. makuwa] >TYK30915.1 retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 114.0 bits (284), Expect = 5.7e-22 Identity = 56/69 (81.16%), Postives = 64/69 (92.75%), Query Frame = 0
BLAST of PI0028767 vs. TAIR 10
Match: AT5G41980.1 (CONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (InterPro:IPR006912); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G43722.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). ) HSP 1 Score: 51.2 bits (121), Expect = 4.2e-07 Identity = 26/67 (38.81%), Postives = 41/67 (61.19%), Query Frame = 0
BLAST of PI0028767 vs. TAIR 10
Match: AT1G43722.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G28730.1); Has 924 Blast hits to 912 proteins in 109 species: Archae - 0; Bacteria - 0; Metazoa - 222; Fungi - 31; Plants - 661; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). ) HSP 1 Score: 42.7 bits (99), Expect = 1.5e-04 Identity = 23/58 (39.66%), Postives = 34/58 (58.62%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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