PI0028727 (gene) Melon (PI 482460) v1

Overview
NamePI0028727
Typegene
OrganismCucumis metuliferus (Melon (PI 482460) v1)
DescriptionDrebrin-like
Locationchr10: 3766104 .. 3769320 (-)
RNA-Seq ExpressionPI0028727
SyntenyPI0028727
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACTTCGCGCCATGACAGTACGATTTCATTGGACAAAGCGATGCTCCTCTACTGCATAATGGAGGAGATACCTGTAAATGTGGGTGTGAAATATTTGTCAACACATCCACGCGTCACGCGACCATTCCCATATTTGATTGAGCAATTGTGTTTAAAGGCATTTCTCGCATTGAAGACTCTCCCTGCGATGCCTATTAAAGATGGGCTTTACTTAATCGTAGGCTTCTACCAAGTTATTAATCTCCACAAGAACAAAACTGAAGTAGACGCCTTAAAACTAAGAAAGCTGGAAAAGGTGAACAAGAACCGATGAAGTGGAGATTGAAAAATAAGAAGAAAGGAAGAGTGAAACGTCAAGCCCACTGATTCGCAAGAGGAAAGGCGAGGATGAGGTCTCTAGGTCAAAGAAGAAACCAAAGAAACCCAAGGCCAAGAACTCCATTGACCCTCTTCCCCTTGCGACCAAGACTTCGCTTGACCCCCAAATGCCCAAAACCACCATCACGTCCTCGCCTTCCAAAACCCTAAAAGCACCAAATTCTTCTCATCCAAAATGCCACCACCTCCCCAAAAATCCAAGTCACCAAGTCCTTCCCGCTAAATCCAAAATTTCACCACTACTACTATTCCTCAGCAGCAAAAGGAAAATCCTTAATCTTTTGTCGCAAAATTACCTGACCAAACCACCGTCATCACAAATCTCGTGCCCAACCCTACCATTCCGCAAGAATTTGAGGAACCCCTATCTGATGTTGAACTAGACGTCGTGTCAGGACCTTTTGAGACGCAGCTATAAATTAAATTTTGGGGTATATTTATTTAAATTTCTTCCTTTATATTTGTACTTATGTAAAATTATTTTCTTGTAATTACTTCTTTCGCATTATAGGTACATATTTTGAAGCATTTACTTTGCATTTTTACTTTACCTGTTTCAAGCAATAGCTTCTAGCATTTAAGTTCTTTAATTTTTCTTTGGTCCGCAATGATAACTACAAATGGTGAGGACAAACATTGTTTTAAATTTGGGAGTGTGATAACTTGTAGAAATACAAGATATTATATCCTTTTAGGCAAAGTAATGAAGTCAAAACGCGAAATAAATGATTAGAATGCGTAGCTTCTAGTGCAAATCTATAATAATAAGAGAATTAACCTTACATAAATCATCACGTCTGATTAACTATGCTTTTAAGTGTTTTTCTACGTAGGATGACATAAAGAAAAAAAGAAAGCGAATCGCGCAGAAGCTTAGCACTAAGAAAAACGCACGACAAAATGTAATTCAGCGAGATGTCAGCGCACCATTTGGCGATCCGATTCACTAGAAGACAAAGTGGTAATTGGAGTTGATGTGACTTAACGAGGATACTTTCGGCGTCACGCAGAAGATAAGGATAGTGTGTAGACGTGCAATAAATACTTCTTGCCTAAAGTATACCTATATAACATTTCAACTCTATCTCAAATAGAGGAGGACACTACTACAAAAAACAGCATTACTTGCGCTTGAAGTTTAGAAATACTTGACAGTTCTAATAAAAAATGTCAAGTAAAATAAAAAAACGTAAAGAATAACGAAAAAGTAGAAAAATGCAAATTTTTTCCAATTTTTTTTCCAATACTTGATAGGTAAAAGCGTCAAGATTAGTTTTATGTACTTGACAAGATTTAAATGTCAAGAATTAGGTTCCCCCCCTTTTTTCCCCTACTTTCCCAAGAATTAAGTTTCCCTATTTTTTTTCCCAACTTTCCCCTTTCTTAATCTTTCTCCAAAAATTAGGTCTCCCCTTTCCCCATTTTTGGAGACCATTCTTCTTCCCCTTCCCCATTTTCAAAATCTCAATGGTGAACTAATAGGGTTGCTCACAGCGGACTGCTTGGCGGACTGTCTTCCTTGACGGTGAACGGAAACGTGTGGGTGTGTGCGCGGCGGACGATCTTCCTCGACGGTGAACTGAAACGCGGGTTGTGCGGCAGCGGTCTTCATCTCAGGCTGTTGCGTAGCGACGACCTTGCTCGATGGGAACTACGGCAGCAGAGGTTGCTCGACAAACCTGAACCCACCATAGAAAACTGCTTGCGACAGGCTTGCTCGGTATGTGTTTTTTTCTCTTTGATGATTTAGACTACTTTCCTAAATTGAAAGATTGGGATTGAAAGATTTGGAAATGTGAAGAAATTTTGAGGAAGAAGATGATAGGAATTAGAGGAAAGTTGTTTTGTGGGTTTGGATTGATGCTCCTCCTCCTCCTCCTCCATTATTACTTCCAACATTTTCCACAATTGCAAAAACTTTAGATTTGAACCAAACAATAATTGTTGGTTGATTTTGGACTAAAAATTTCTATTTTAAAAACATTTTTCAAAATTAATGTTGTGTGTATAGGGAAGAAAGTATGTGTGTATAGATAGTTGGGGGGGGGGGGGTTGTGGGTTCAAGATTAGTAAATTGAGTTTGAAATTGATATATGGGTAAGTGTATAGGGTTTGAGATTAAGTTTGAGTTTTAAATATAGCTCATATTTTTACATAATGTTAATTATTTAGTATCAATAACTTGAATCATCTCTTGGTTATAGGGAAAAAGTACATGAGTTGTTGGGGGTGGGGGGGTTTTAATTGGTTCAATAGGTCTTGAAATTCCATCACCAACTCTTCTCTTCATTTGTCTCTTCTTTTCTCCCATTTTCCAATTCTTGTGCCACACACACCACACACATATATTCTTATTCTCTAAGTGTTTACTTGAAAAAGATTTGATTCACTAAACAATATTGTGGAATCTAACAAAAAGTCTCCTCAAGGTGTTCGACGAAAGGCCTATGAGACAATTGAAGGGACAACAATATCTTGGACTTGTTGGGGAACTTATCTCATGAGGTTAGTAGTACCAAACAACTATTTTTTATTATTATGACCATATAGTAGCTAGTAGTTGTGACTTGTTGGTAGTTTTCTTGCTAAGGTGGTTGTTGATAAGTTGTAGAAATACAAGTTATTGCGGCCTTTTAGGTAGAATAATGAAGATATAACGCAATAGAAAAAGAGAAATTAGTATTTATTAGCGATTGTAAATGATAAATTGTATTGCAAAGAGTAAAAGAGTCAAATGCCTGTTTTACGCGTTTTACTATGTCTTATGCAGGATTTTTAGGCAAATAAGAGGTATCCACGTGAGGAAGCTTCAGGCGAGGAACTACGCGAGCAACTAG

mRNA sequence

ATGACTTCGCGCCATGACAGTACGATTTCATTGGACAAAGCGATGCTCCTCTACTGCATAATGGAGGAGATACCTGTAAATGTGGGTGTGAAATATTTGTCAACACATCCACGCGTCACGCGACCATTCCCATATTTGATTGAGCAATTGTGTTTAAAGGCATTTCTCGCATTGAAGACTCTCCCTGCGATGCCTATTAAAGATGGGCTTTACTTAATCGTAGGCTTCTACCAAGTTATTAATCTCCACAAGAACAAAACTGAAGTAGACGCCTTAAAACTAAGAAAGCTGGAAAAGGGTTGCTCACAGCGGACTGCTTGGCGGACTGTCTTCCTTGACGGTGAACGGAAACGTGTGGGCTTGCTCGGTGTTCGACGAAAGGCCTATGAGACAATTGAAGGGACAACAATATCTTGGACTTGTTGGGGAACTTATCTCATGAGGATTTTTAGGCAAATAAGAGGTATCCACGTGAGGAAGCTTCAGGCGAGGAACTACGCGAGCAACTAG

Coding sequence (CDS)

ATGACTTCGCGCCATGACAGTACGATTTCATTGGACAAAGCGATGCTCCTCTACTGCATAATGGAGGAGATACCTGTAAATGTGGGTGTGAAATATTTGTCAACACATCCACGCGTCACGCGACCATTCCCATATTTGATTGAGCAATTGTGTTTAAAGGCATTTCTCGCATTGAAGACTCTCCCTGCGATGCCTATTAAAGATGGGCTTTACTTAATCGTAGGCTTCTACCAAGTTATTAATCTCCACAAGAACAAAACTGAAGTAGACGCCTTAAAACTAAGAAAGCTGGAAAAGGGTTGCTCACAGCGGACTGCTTGGCGGACTGTCTTCCTTGACGGTGAACGGAAACGTGTGGGCTTGCTCGGTGTTCGACGAAAGGCCTATGAGACAATTGAAGGGACAACAATATCTTGGACTTGTTGGGGAACTTATCTCATGAGGATTTTTAGGCAAATAAGAGGTATCCACGTGAGGAAGCTTCAGGCGAGGAACTACGCGAGCAACTAG

Protein sequence

MTSRHDSTISLDKAMLLYCIMEEIPVNVGVKYLSTHPRVTRPFPYLIEQLCLKAFLALKTLPAMPIKDGLYLIVGFYQVINLHKNKTEVDALKLRKLEKGCSQRTAWRTVFLDGERKRVGLLGVRRKAYETIEGTTISWTCWGTYLMRIFRQIRGIHVRKLQARNYASN
Homology
[Close]
BLAST of PI0028727 vs. ExPASy TrEMBL
Match: A0A0A0LAN0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G263250 PE=4 SV=1)

HSP 1 Score: 98.6 bits (244), Expect = 2.7e-17
Identity = 50/107 (46.73%), Postives = 73/107 (68.22%), Query Frame = 0 

Query: 1   MTSRHDSTISLDKAMLLYCIMEEIPVNVG------VKYLSTHPRVTRPFPYLIEQLCLKA 60
           M +RH STIS+++ ML+YCIM++I VN+G      +  L  HPR  RPF YLIEQLCL+A
Sbjct: 38  MPTRHVSTISMERVMLVYCIMKKILVNIGKIISNHIIALVKHPRGARPFSYLIEQLCLRA 97

Query: 61  FLALKTLPAMPIKDGLYLIVGFYQVINLHKNKTEVDALKLRKLEKGC 102
            L L+ LP + +KDG++L    +++I +HKNK ++  LK +   +GC
Sbjct: 98  CLMLEKLPQVEVKDGIWLPSTLHRIIAIHKNKAKIKCLKTK---EGC 141

[Close]
BLAST of PI0028727 vs. ExPASy TrEMBL
Match: A0A5A7SRQ1 (Drebrin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold156G00660 PE=4 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 4.5e-17
Identity = 49/101 (48.51%), Postives = 69/101 (68.32%), Query Frame = 0 

Query: 1   MTSRHDSTISLDKAMLLYCIMEEIPVNVG------VKYLSTHPRVTRPFPYLIEQLCLKA 60
           M +RHD+TIS+DK +L+YCIMEE+PVNVG      +     HP+ +RPFP+LIE+LCLKA
Sbjct: 1   MPTRHDNTISMDKIVLIYCIMEELPVNVGEIICEHIFAWVKHPQGSRPFPHLIEKLCLKA 60

Query: 61  FLALKTLPAMPIKDGLYLIVGFYQVINLHKNKTEVDALKLR 96
             +L+ LP + +KD +Y     Y  I +HKNK+ +  LK +
Sbjct: 61  CPSLEKLPQVEVKDRVYTASTLYCFIAIHKNKSRLKHLKTK 101

[Close]
BLAST of PI0028727 vs. ExPASy TrEMBL
Match: A0A5A7UWQ4 (Drebrin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold22G00550 PE=4 SV=1)

HSP 1 Score: 90.9 bits (224), Expect = 5.5e-15
Identity = 48/102 (47.06%), Postives = 70/102 (68.63%), Query Frame = 0 

Query: 1   MTSRHDSTISLDKAMLLYCIMEEIPVNVG---VKYLST---HPRVTRPFPYLIEQLCLKA 60
           M + HDSTIS+++ ML+Y IMEEI VNVG    K++     HPR TRPFP LI++LCLKA
Sbjct: 1   MPTSHDSTISMERIMLVYYIMEEIHVNVGEIISKHIIVGVKHPRGTRPFPQLIKKLCLKA 60

Query: 61  FLALKTLPAMPIKDGLYLIVGFYQVINLHKNKTEVDALKLRK 97
             AL  LP + +KDG++     Y++I +++NK ++  LK ++
Sbjct: 61  CSALDNLPQIGVKDGIWSSATLYRIIAINRNKAKLKYLKAKQ 102

[Close]
BLAST of PI0028727 vs. ExPASy TrEMBL
Match: A0A5A7VJ48 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold21G004490 PE=4 SV=1)

HSP 1 Score: 89.4 bits (220), Expect = 1.6e-14
Identity = 44/102 (43.14%), Postives = 65/102 (63.73%), Query Frame = 0 

Query: 1   MTSRHDSTISLDKAMLLYCIMEEIPVNVG------VKYLSTHPRVTRPFPYLIEQLCLKA 60
           M +R +S +S+D+ ML+YCIMEE+ VN+G      +     HP   R FP+LIE+LCLK 
Sbjct: 98  MRTRQESIVSMDRMMLIYCIMEELQVNLGEIICEHILECVKHPYGARSFPHLIEKLCLKT 157

Query: 61  FLALKTLPAMPIKDGLYLIVGFYQVINLHKNKTEVDALKLRK 97
            LAL+ LP + +KDG+   +   ++I +HKNK  +  LK +K
Sbjct: 158 CLALEKLPQVEVKDGMCTTITLPRIIAIHKNKARLKRLKTKK 199

[Close]
BLAST of PI0028727 vs. ExPASy TrEMBL
Match: A0A5D3BPB1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold602G00710 PE=4 SV=1)

HSP 1 Score: 89.4 bits (220), Expect = 1.6e-14
Identity = 44/102 (43.14%), Postives = 65/102 (63.73%), Query Frame = 0 

Query: 1   MTSRHDSTISLDKAMLLYCIMEEIPVNVG------VKYLSTHPRVTRPFPYLIEQLCLKA 60
           M +R +S +S+D+ ML+YCIMEE+ VN+G      +     HP   R FP+LIE+LCLK 
Sbjct: 1   MRTRQESIVSMDRMMLIYCIMEELQVNLGEIICEHILECVKHPYGARSFPHLIEKLCLKT 60

Query: 61  FLALKTLPAMPIKDGLYLIVGFYQVINLHKNKTEVDALKLRK 97
            LAL+ LP + +KDG+   +   ++I +HKNK  +  LK +K
Sbjct: 61  CLALEKLPQVEVKDGMCTTITLPRIIAIHKNKARLKRLKTKK 102

[Close]
BLAST of PI0028727 vs. NCBI nr
Match: KGN57727.1 (hypothetical protein Csa_009739 [Cucumis sativus])

HSP 1 Score: 98.6 bits (244), Expect = 5.5e-17
Identity = 50/107 (46.73%), Postives = 73/107 (68.22%), Query Frame = 0 

Query: 1   MTSRHDSTISLDKAMLLYCIMEEIPVNVG------VKYLSTHPRVTRPFPYLIEQLCLKA 60
           M +RH STIS+++ ML+YCIM++I VN+G      +  L  HPR  RPF YLIEQLCL+A
Sbjct: 38  MPTRHVSTISMERVMLVYCIMKKILVNIGKIISNHIIALVKHPRGARPFSYLIEQLCLRA 97

Query: 61  FLALKTLPAMPIKDGLYLIVGFYQVINLHKNKTEVDALKLRKLEKGC 102
            L L+ LP + +KDG++L    +++I +HKNK ++  LK +   +GC
Sbjct: 98  CLMLEKLPQVEVKDGIWLPSTLHRIIAIHKNKAKIKCLKTK---EGC 141

[Close]
BLAST of PI0028727 vs. NCBI nr
Match: KAA0032726.1 (drebrin-like [Cucumis melo var. makuwa] >TYJ98758.1 drebrin-like [Cucumis melo var. makuwa])

HSP 1 Score: 97.8 bits (242), Expect = 9.3e-17
Identity = 49/101 (48.51%), Postives = 69/101 (68.32%), Query Frame = 0 

Query: 1   MTSRHDSTISLDKAMLLYCIMEEIPVNVG------VKYLSTHPRVTRPFPYLIEQLCLKA 60
           M +RHD+TIS+DK +L+YCIMEE+PVNVG      +     HP+ +RPFP+LIE+LCLKA
Sbjct: 1   MPTRHDNTISMDKIVLIYCIMEELPVNVGEIICEHIFAWVKHPQGSRPFPHLIEKLCLKA 60

Query: 61  FLALKTLPAMPIKDGLYLIVGFYQVINLHKNKTEVDALKLR 96
             +L+ LP + +KD +Y     Y  I +HKNK+ +  LK +
Sbjct: 61  CPSLEKLPQVEVKDRVYTASTLYCFIAIHKNKSRLKHLKTK 101

[Close]
BLAST of PI0028727 vs. NCBI nr
Match: KAA0060282.1 (drebrin-like [Cucumis melo var. makuwa])

HSP 1 Score: 90.9 bits (224), Expect = 1.1e-14
Identity = 48/102 (47.06%), Postives = 70/102 (68.63%), Query Frame = 0 

Query: 1   MTSRHDSTISLDKAMLLYCIMEEIPVNVG---VKYLST---HPRVTRPFPYLIEQLCLKA 60
           M + HDSTIS+++ ML+Y IMEEI VNVG    K++     HPR TRPFP LI++LCLKA
Sbjct: 1   MPTSHDSTISMERIMLVYYIMEEIHVNVGEIISKHIIVGVKHPRGTRPFPQLIKKLCLKA 60

Query: 61  FLALKTLPAMPIKDGLYLIVGFYQVINLHKNKTEVDALKLRK 97
             AL  LP + +KDG++     Y++I +++NK ++  LK ++
Sbjct: 61  CSALDNLPQIGVKDGIWSSATLYRIIAINRNKAKLKYLKAKQ 102

[Close]
BLAST of PI0028727 vs. NCBI nr
Match: KAA0066376.1 (hypothetical protein E6C27_scaffold21G004490 [Cucumis melo var. makuwa])

HSP 1 Score: 89.4 bits (220), Expect = 3.3e-14
Identity = 44/102 (43.14%), Postives = 65/102 (63.73%), Query Frame = 0 

Query: 1   MTSRHDSTISLDKAMLLYCIMEEIPVNVG------VKYLSTHPRVTRPFPYLIEQLCLKA 60
           M +R +S +S+D+ ML+YCIMEE+ VN+G      +     HP   R FP+LIE+LCLK 
Sbjct: 98  MRTRQESIVSMDRMMLIYCIMEELQVNLGEIICEHILECVKHPYGARSFPHLIEKLCLKT 157

Query: 61  FLALKTLPAMPIKDGLYLIVGFYQVINLHKNKTEVDALKLRK 97
            LAL+ LP + +KDG+   +   ++I +HKNK  +  LK +K
Sbjct: 158 CLALEKLPQVEVKDGMCTTITLPRIIAIHKNKARLKRLKTKK 199

[Close]
BLAST of PI0028727 vs. NCBI nr
Match: TYK00908.1 (hypothetical protein E5676_scaffold602G00710 [Cucumis melo var. makuwa])

HSP 1 Score: 89.4 bits (220), Expect = 3.3e-14
Identity = 44/102 (43.14%), Postives = 65/102 (63.73%), Query Frame = 0 

Query: 1   MTSRHDSTISLDKAMLLYCIMEEIPVNVG------VKYLSTHPRVTRPFPYLIEQLCLKA 60
           M +R +S +S+D+ ML+YCIMEE+ VN+G      +     HP   R FP+LIE+LCLK 
Sbjct: 1   MRTRQESIVSMDRMMLIYCIMEELQVNLGEIICEHILECVKHPYGARSFPHLIEKLCLKT 60

Query: 61  FLALKTLPAMPIKDGLYLIVGFYQVINLHKNKTEVDALKLRK 97
            LAL+ LP + +KDG+   +   ++I +HKNK  +  LK +K
Sbjct: 61  CLALEKLPQVEVKDGMCTTITLPRIIAIHKNKARLKRLKTKK 102

The following BLAST results are available for this feature:
BLAST of PI0028727 vs.
Match NameE-valueIdentityDescription
BLAST of PI0028727 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LAN02.7e-1746.73Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G263250 PE=4 SV=1[more]
A0A5A7SRQ14.5e-1748.51Drebrin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold156G00660 P... [more]
A0A5A7UWQ45.5e-1547.06Drebrin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold22G00550 PE... [more]
A0A5A7VJ481.6e-1443.14Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5D3BPB11.6e-1443.14Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
BLAST of PI0028727 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN57727.15.5e-1746.73hypothetical protein Csa_009739 [Cucumis sativus][more]
KAA0032726.19.3e-1748.51drebrin-like [Cucumis melo var. makuwa] >TYJ98758.1 drebrin-like [Cucumis melo v... [more]
KAA0060282.11.1e-1447.06drebrin-like [Cucumis melo var. makuwa][more]
KAA0066376.13.3e-1443.14hypothetical protein E6C27_scaffold21G004490 [Cucumis melo var. makuwa][more]
TYK00908.13.3e-1443.14hypothetical protein E5676_scaffold602G00710 [Cucumis melo var. makuwa][more]
BLAST of PI0028727 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
PI0028727.1PI0028727.1mRNA