PI0028701 (gene) Melon (PI 482460) v1

Overview


Name	PI0028701
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Formin-like protein 4 isoform X2
Location	chr08: 8446666 .. 8450093 (+)
RNA-Seq Expression	PI0028701
Synteny	PI0028701

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAACTTCGACCAAAAGACGGTAAGAAGTTGAATGATATTGAGTATTTTCAACTCAATCATTCTAGTGCGAAGAAAGGATGGGTGGTTGAGGCAAAAGAGAAATATGTAAGCAAAATTTGGTGTTCATTTGTAGTTTTCTTCTTTCTTTTTTCTTTTTACAATATACCAATACCAATATGTAACTATTATATAGGATGAAATGATGGCACTAAAAACTGATTCACAAGAAGTCGGAGAATCTATTGAAGATAAGAGATTTGTGATCCAGTGTTCGGTAAGCGGTCAGGTCACGTGAAAGGTCTTGGTTGGGGACCAAGACCAAAACATGCTAGGAATGGATCAAGGTACAATCACACTAAAGAAATAGAGGCTCAAGTTGCACACTTACAAAATATAGTTGAATCACAACAAGTCATCATTCAAGAGATCTTACGAAGGCTAACAACTCAAGAAGATACCTCTAACATAGAAAGAAGTCCATAACAATCTAACGATAGTTAACAGGTAATATTTATTGGAAGTTCTTCTTACAACTCTAGTTTGTTGAAGTTATTGAATTTCATTAGTTTGTGTGTATAACTGCTTTGACTATCGTGCAGCTATGGTAGTCCCTTTTTTTATTGGATTTCAAATGTGCTTGAATGATCATTTGTTCCCAAACGTGTTTTAATTAGGATGTGGCTAACTTATTAGCTCTGTCTTTTGTTTAATGTTTAGTGATGGTACATAGCACTTAATTGTAGTGTGCATCGTAAATTGTATTGTAACATTTAATCAAAGATCTAGCAAACAAGGATGTGAGTTTGGAGATCTTTAGAGTTGAATTGGTTCCTAGGTTGTATAACTTGTTGGAGTTCTTTAGTGTTGAAGTATGAAAGTGTTAAAGAGCTTTGTTTGTTTAGTTTGCAACACTATGGACATAATTTTGATATACTAATGACCCCTTTGGTTCTTTATGCTTTTATTCTTGGTTATATAACTTGGAGATCTTTAATATTGGTTTGAAACTTCATACCTATGTAAGAGATCTTTAGAGTTGGTTTAAAAATTCATACATATGTTGAATTGGTCCCTAGGTTGTATAACTTGTTGGAGTTCTTTAGTGTTGAATTGTTAAAGAGCTTTGTTTGTTTAGTTTGCAAATCTATGAACATGATTTTGATATAGTAATGGTCCCTTCGGTTCTTTATGCTTTTATTCTTGTTATATAACTTGGAGATCTTTGGTGTTAGTTTGAAACTTCATACCTATGTTAGAGATCCTTAAAGTTGGTTTAAAAATTACCTATGTTGAATTGGTCCCTAGGTTCTATAACTTGTTGGAGTTCTTTAGTGTTGAAGTGTTAAAGAGCTTTATTTGTTTAGTTTGCAACTCTATGAACATGATTTTGATATAGTAATGGTCCCTTCGGTTCTTTATGCTTTTATTCTTGGTTATATAAGTTGGAGATCTTTGGTGTTGGTTTGAAACTTCATACCTATGTTAGAGATCTTTAGAGTTGGTTTAAAAATTTATACCAATGTTGAATTGGTCCCTAGGTTGTATATCTTGTTGGAGTTCTTTAGTGTTGAAGTGTTAAAGTCCTTTGTTTGTTTAGTTTGCAATGTTGAACATAAGTCCTTTGTTTGTTTAGTTTGCAATGCTGAACATGATTTTGATATAGTTATGGCCCCTTCGGTTCTTTTTGGTTGTGTTTGATGGAAACAAATTGAGCATTCACGAGTGTTGTTAAATTATTCATACACTTTCATTTAATTTCTTTGACAAGGCAACAAAGTAGGAATTAAAGTCTTTGTCTTGTTTTGTTTTTGGGAAGAACAAAATATAGGGAGGTATGTTGTTAATTAAGATTGGTTTTATGTGTCTTCTAATTACATGAAGAGAGACCAATATAATGTGCTTACGTATTTTATTTCATTTCTCTGACAAATTATATGTTTTGATGGTTGGATTGGACTGGACATAGCTTGTTTGGTATACTTGTGATATATCTTTTTTGTGTATACTTGTGATCTTAGTTGGAAGTTTTGTTAGGTATACTTGTGATATACCTTTTTTGGGTATACTCTTCAATGACATCTTAGGGTATATGTGTTGGTACTAATTTTTGTTTATAGGTCTTGACTCATTTAGGAAATGATCGAAGTAGAAAAATATAACTTGTCTAGCAAAATTCAACACATGTGTATTTCCCTTTATAATATTTTGGTTGTTTAAACTTGAAGTAATTTGTTTCAATGATATTGGAAATGTGTATCTCTTTATAATTTATTTTTTATTTGTAAAATGACTAGTTGATTATTATTTGCTCAATACAATGTTGTTTATAACAGGTTTACGTATTAAATTAGACATTATTTTTTAACCAATAAAATATTTTTAGCAACAATTTTGTATCGTCAGTAAATCAAGGTTTTAAAAAAACTATTTTGAAATTTATAGTAGCACAAATATAATTTGGACCGACGTTTTTGTTATGTCGGAAAAGATGTATGCAACACTAGAAACCAACATTTAGTAATAGTTTATATGTTCCTAAAACTTATCTTTCAGAGATAAGTTTATAATGTCACTGTATATCGCAATTAGCAATGCATAAAATGTTGTTAAAGGTAATGCTTCAGTAACGCGCATGCGTTAGAAAAAGTATAGTTATAGCGGTGCAGTGAAAAACGTGTTACTATAGCTATTGACGGCGAGGATATTGTGGCAGATACAGCGGTGTGAGATTCTACATTGCTAAAACAATCAGCGACGTTTTTTTGGCTTTTTGCAACGTCTTTTTTTTTTCGCCACTGAAAGTGGTATTTCTTGTAGTGATGTCTTTTAGCTATATACATTAATATCAAACACCTTCCATCTAGCATTGCCAATAAGAAAACGTTTAATTCTACTCAGTTTATGTGGGATAGAGTTCTATTAGGTTTTTATTAGGAAGGAACTTTATCTTAGCCTTCTGCTGATTTCACTTGGATGGGGACAATCATAGAGTTGTGTAAGTTTCTATCTGAAATAGACAGTGATAGAACTATCTGAGATAGAGAGATAACGATCATAGGCTATCATTCACTGTTCTTCTTATTAAGTTCAATATTTTCTTGCAGCAAATCATTGAAGAAAAGCAAATAGAGAAAGAAAATGAGCAAATGGTAAAGGAGCAAAATGAGGAAGATACCAATAAGGAAGAGAATGAAGAGATTTTCTTTAATACAAAGAGAAAACAAGAGGGGAAGCAAGTTGTTGATGATAAAATGGAAATAGAAGAAGAGACTGATAGTGATAGTGAAATGGATGCAGATGAAGAGATTGAAACAAAAGGAAATAAGAGAAAACTGAAGGGAAAGAAAAGGCAACAAGAAGGGGGAAAGTGTAAAAAGTTTAGATCAAAGGTACTAGAAAACACATGCTTTCAAAAGGATGAATGA

mRNA sequence

ATGCAACTTCGACCAAAAGACGGTAAGAAGTTGAATGATATTGAGTATTTTCAACTCAATCATTCTAGTGCGAAGAAAGGATGGGTGGTTGAGGCAAAAGAGAAATATGATGAAATGATGGCACTAAAAACTGATTCACAAGAAGTCGGAGAATCTATTGAAGATAAGAGATTTGTGATCCAGTGTTCGCAAATCATTGAAGAAAAGCAAATAGAGAAAGAAAATGAGCAAATGGTAAAGGAGCAAAATGAGGAAGATACCAATAAGGAAGAGAATGAAGAGATTTTCTTTAATACAAAGAGAAAACAAGAGGGGAAGCAAGTTGTTGATGATAAAATGGAAATAGAAGAAGAGACTGATAGTGATAGTGAAATGGATGCAGATGAAGAGATTGAAACAAAAGGAAATAAGAGAAAACTGAAGGGAAAGAAAAGGCAACAAGAAGGGGGAAAGTGTAAAAAGTTTAGATCAAAGGTACTAGAAAACACATGCTTTCAAAAGGATGAATGA

Coding sequence (CDS)

ATGCAACTTCGACCAAAAGACGGTAAGAAGTTGAATGATATTGAGTATTTTCAACTCAATCATTCTAGTGCGAAGAAAGGATGGGTGGTTGAGGCAAAAGAGAAATATGATGAAATGATGGCACTAAAAACTGATTCACAAGAAGTCGGAGAATCTATTGAAGATAAGAGATTTGTGATCCAGTGTTCGCAAATCATTGAAGAAAAGCAAATAGAGAAAGAAAATGAGCAAATGGTAAAGGAGCAAAATGAGGAAGATACCAATAAGGAAGAGAATGAAGAGATTTTCTTTAATACAAAGAGAAAACAAGAGGGGAAGCAAGTTGTTGATGATAAAATGGAAATAGAAGAAGAGACTGATAGTGATAGTGAAATGGATGCAGATGAAGAGATTGAAACAAAAGGAAATAAGAGAAAACTGAAGGGAAAGAAAAGGCAACAAGAAGGGGGAAAGTGTAAAAAGTTTAGATCAAAGGTACTAGAAAACACATGCTTTCAAAAGGATGAATGA

Protein sequence

MQLRPKDGKKLNDIEYFQLNHSSAKKGWVVEAKEKYDEMMALKTDSQEVGESIEDKRFVIQCSQIIEEKQIEKENEQMVKEQNEEDTNKEENEEIFFNTKRKQEGKQVVDDKMEIEEETDSDSEMDADEEIETKGNKRKLKGKKRQQEGGKCKKFRSKVLENTCFQKDE

Homology

[Close]

BLAST of PI0028701 vs. ExPASy TrEMBL
Match: A0A0A0KDT8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G383550 PE=4 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 3.6e-06
Identity = 27/32 (84.38%), Postives = 31/32 (96.88%), Query Frame = 0


Query: 6   KDGKKLNDIEYFQLNHSSAKKGWVVEAKEKYD 38
           +DGKKLND+E+FQL HSSAKKGWVVEA+EKYD
Sbjct: 83  EDGKKLNDMEFFQLTHSSAKKGWVVEAEEKYD 114

[Close]

BLAST of PI0028701 vs. ExPASy TrEMBL
Match: A0A5A7UWU9 (Formin-like protein 4 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold318G00550 PE=4 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 8.0e-06
Identity = 27/48 (56.25%), Postives = 37/48 (77.08%), Query Frame = 0


Query: 3  LRPKDGKKLNDIEYFQLNHSSAKKGWVVEAKEKYDEMMALKTDSQEVG 51
          +  ++GK++++IE FQL HS+ K GWV EAKEKYDEM+ LKT S + G
Sbjct: 51 IEKEEGKEVSEIELFQLTHSNEKNGWVNEAKEKYDEMVELKTTSSQEG 98

[Close]

BLAST of PI0028701 vs. ExPASy TrEMBL
Match: A0A5D3DBZ5 (Formin-like protein 4 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold392G00730 PE=4 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 8.0e-06
Identity = 27/48 (56.25%), Postives = 37/48 (77.08%), Query Frame = 0


Query: 3  LRPKDGKKLNDIEYFQLNHSSAKKGWVVEAKEKYDEMMALKTDSQEVG 51
          +  ++GK++++IE FQL HS+ K GWV EAKEKYDEM+ LKT S + G
Sbjct: 51 IEKEEGKEVSEIELFQLTHSNEKNGWVNEAKEKYDEMVELKTTSSQEG 98

[Close]

BLAST of PI0028701 vs. ExPASy TrEMBL
Match: A0A5A7T3L6 (DUF4218 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold69G00560 PE=4 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 8.0e-06
Identity = 27/48 (56.25%), Postives = 37/48 (77.08%), Query Frame = 0


Query: 3   LRPKDGKKLNDIEYFQLNHSSAKKGWVVEAKEKYDEMMALKTDSQEVG 51
           +  ++GK++++IE FQL HS+ K GWV EAKEKYDEM+ LKT S + G
Sbjct: 776 IEKEEGKEVSEIELFQLTHSNEKNGWVNEAKEKYDEMVELKTTSSQEG 823

[Close]

BLAST of PI0028701 vs. ExPASy TrEMBL
Match: A0A0A0LW59 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G181490 PE=4 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 8.0e-06
Identity = 41/69 (59.42%), Postives = 55/69 (79.71%), Query Frame = 0


Query: 63  SQIIEEKQIEKENEQMVKEQNEEDTNKEENEEIFFNTKRKQEGKQVVDDKMEIEEETDSD 122
           +QIIEEK++EKE+E++ +EQN+ED +  E+EEI F  +R+Q+GK VVDD  E EEE  SD
Sbjct: 26  NQIIEEKKLEKEDEEVKEEQNQEDID-NESEEILFTIRRRQKGKLVVDDDDETEEEIASD 85

Query: 123 SEMDADEEI 132
           SE DA+EEI
Sbjct: 86  SEEDAEEEI 93

[Close]

BLAST of PI0028701 vs. NCBI nr
Match: KAE8647269.1 (hypothetical protein Csa_018247 [Cucumis sativus])

HSP 1 Score: 61.6 bits (148), Expect = 7.4e-06
Identity = 27/32 (84.38%), Postives = 31/32 (96.88%), Query Frame = 0


Query: 6  KDGKKLNDIEYFQLNHSSAKKGWVVEAKEKYD 38
          +DGKKLND+E+FQL HSSAKKGWVVEA+EKYD
Sbjct: 32 EDGKKLNDMEFFQLTHSSAKKGWVVEAEEKYD 63

[Close]

BLAST of PI0028701 vs. NCBI nr
Match: TYK21104.1 (formin-like protein 4 isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 60.5 bits (145), Expect = 1.7e-05
Identity = 27/48 (56.25%), Postives = 37/48 (77.08%), Query Frame = 0


Query: 3  LRPKDGKKLNDIEYFQLNHSSAKKGWVVEAKEKYDEMMALKTDSQEVG 51
          +  ++GK++++IE FQL HS+ K GWV EAKEKYDEM+ LKT S + G
Sbjct: 51 IEKEEGKEVSEIELFQLTHSNEKNGWVNEAKEKYDEMVELKTTSSQEG 98

[Close]

BLAST of PI0028701 vs. NCBI nr
Match: KAA0060322.1 (formin-like protein 4 isoform X2 [Cucumis melo var. makuwa] >TYK22072.1 formin-like protein 4 isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 60.5 bits (145), Expect = 1.7e-05
Identity = 27/48 (56.25%), Postives = 37/48 (77.08%), Query Frame = 0


Query: 3  LRPKDGKKLNDIEYFQLNHSSAKKGWVVEAKEKYDEMMALKTDSQEVG 51
          +  ++GK++++IE FQL HS+ K GWV EAKEKYDEM+ LKT S + G
Sbjct: 51 IEKEEGKEVSEIELFQLTHSNEKNGWVNEAKEKYDEMVELKTTSSQEG 98

[Close]

BLAST of PI0028701 vs. NCBI nr
Match: KAA0036187.1 (uncharacterized protein E6C27_scaffold69G00560 [Cucumis melo var. makuwa])

HSP 1 Score: 60.5 bits (145), Expect = 1.7e-05
Identity = 27/48 (56.25%), Postives = 37/48 (77.08%), Query Frame = 0


Query: 3   LRPKDGKKLNDIEYFQLNHSSAKKGWVVEAKEKYDEMMALKTDSQEVG 51
           +  ++GK++++IE FQL HS+ K GWV EAKEKYDEM+ LKT S + G
Sbjct: 776 IEKEEGKEVSEIELFQLTHSNEKNGWVNEAKEKYDEMVELKTTSSQEG 823

[Close]

BLAST of PI0028701 vs. NCBI nr
Match: KAA0067296.1 (formin-like protein 4 isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 57.0 bits (136), Expect = 1.8e-04
Identity = 26/48 (54.17%), Postives = 35/48 (72.92%), Query Frame = 0


Query: 3  LRPKDGKKLNDIEYFQLNHSSAKKGWVVEAKEKYDEMMALKTDSQEVG 51
          +  +DGK++++IE FQL HS+ K GWV EAKEKYD  + LKT S + G
Sbjct: 51 IEKEDGKEVSEIELFQLTHSNEKNGWVNEAKEKYDGRVELKTTSSQEG 98

The following BLAST results are available for this feature:

BLAST of PI0028701 vs.


Match Name	E-value	Identity	Description

BLAST of PI0028701 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KDT8	3.6e-06	84.38	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G383550 PE=4 SV=1	[more]
A0A5A7UWU9	8.0e-06	56.25	Formin-like protein 4 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676...	[more]
A0A5D3DBZ5	8.0e-06	56.25	Formin-like protein 4 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676...	[more]
A0A5A7T3L6	8.0e-06	56.25	DUF4218 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2...	[more]
A0A0A0LW59	8.0e-06	59.42	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G181490 PE=4 SV=1	[more]

BLAST of PI0028701 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8647269.1	7.4e-06	84.38	hypothetical protein Csa_018247 [Cucumis sativus]	[more]
TYK21104.1	1.7e-05	56.25	formin-like protein 4 isoform X2 [Cucumis melo var. makuwa]	[more]
KAA0060322.1	1.7e-05	56.25	formin-like protein 4 isoform X2 [Cucumis melo var. makuwa] >TYK22072.1 formin-l...	[more]
KAA0036187.1	1.7e-05	56.25	uncharacterized protein E6C27_scaffold69G00560 [Cucumis melo var. makuwa]	[more]
KAA0067296.1	1.8e-04	54.17	formin-like protein 4 isoform X2 [Cucumis melo var. makuwa]	[more]

BLAST of PI0028701 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 66..91
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 73..113
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 73..150
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 114..129

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0028701.1	PI0028701.1	mRNA