PI0028675 (gene) Melon (PI 482460) v1

Overview


Name	PI0028675
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase, putative
Location	chr02: 24048863 .. 24049392 (-)
RNA-Seq Expression	PI0028675
Synteny	PI0028675

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CGCGTTCGCTTTGAATCAGATTCTCACGCCCTATAAATACCCATTCCCTCTCACAAATTTTCATCGTTTCATTTCCGATTCACTAATTTCTTATTTTCTCCATCACATTCTTCATCTTCAATCCAAATCCATGGCTGCAGGAAACACCTCCTACGATTGGGCCGACCAGTGGGACTACAACGACTCCACCGACGTAGCCACAGATAACAAGAAGAAGAGCGGCGGTGGAAATAGTTCGGCCAAATATAAGCAAAAGGTCGGCGAAGGGCTTGGGAAGACCAAAGCCGTGGCCTCTAATAGCGTCAAAAAGGTTAAAGAAGGAACCTCTATTGGTTTCCAATGGATTAAAGATAAATATAATAAAACTGCTCATAAGAAGTAGAATTCATTCTTTTTCTCTCTGTAGATCTCTAGCTGCTTTCATTTTGATTATCGTTGAGTTATCTGTATCTTTTTCTGTTTGATTATATAGATACATGTACACCATAGATTGTTATTATTCTTTTGTTAATATGATTTCATTTGATCTC

mRNA sequence

CGCGTTCGCTTTGAATCAGATTCTCACGCCCTATAAATACCCATTCCCTCTCACAAATTTTCATCGTTTCATTTCCGATTCACTAATTTCTTATTTTCTCCATCACATTCTTCATCTTCAATCCAAATCCATGGCTGCAGGAAACACCTCCTACGATTGGGCCGACCAGTGGGACTACAACGACTCCACCGACGTAGCCACAGATAACAAGAAGAAGAGCGGCGGTGGAAATAGTTCGGCCAAATATAAGCAAAAGGTCGGCGAAGGGCTTGGGAAGACCAAAGCCGTGGCCTCTAATAGCGTCAAAAAGGTTAAAGAAGGAACCTCTATTGGTTTCCAATGGATTAAAGATAAATATAATAAAACTGCTCATAAGAAGTAGAATTCATTCTTTTTCTCTCTGTAGATCTCTAGCTGCTTTCATTTTGATTATCGTTGAGTTATCTGTATCTTTTTCTGTTTGATTATATAGATACATGTACACCATAGATTGTTATTATTCTTTTGTTAATATGATTTCATTTGATCTC

Coding sequence (CDS)

ATGGCTGCAGGAAACACCTCCTACGATTGGGCCGACCAGTGGGACTACAACGACTCCACCGACGTAGCCACAGATAACAAGAAGAAGAGCGGCGGTGGAAATAGTTCGGCCAAATATAAGCAAAAGGTCGGCGAAGGGCTTGGGAAGACCAAAGCCGTGGCCTCTAATAGCGTCAAAAAGGTTAAAGAAGGAACCTCTATTGGTTTCCAATGGATTAAAGATAAATATAATAAAACTGCTCATAAGAAGTAG

Protein sequence

MAAGNTSYDWADQWDYNDSTDVATDNKKKSGGGNSSAKYKQKVGEGLGKTKAVASNSVKKVKEGTSIGFQWIKDKYNKTAHKK

Homology

[Close]

BLAST of PI0028675 vs. ExPASy TrEMBL
Match: A0A0A0LUC7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G005770 PE=4 SV=1)

HSP 1 Score: 150.6 bits (379), Expect = 2.9e-33
Identity = 75/84 (89.29%), Postives = 81/84 (96.43%), Query Frame = 0


Query: 1  MAAG-NTSYDWADQWDYNDSTDVATDNKKKSGGGNSSAKYKQKVGEGLGKTKAVASNSVK 60
          MAAG NTSYDWADQWDY+DSTDV +DNKKK+GGGNSSAKYKQKVGEGLGKTK+VASN VK
Sbjct: 1  MAAGNNTSYDWADQWDYSDSTDVVSDNKKKTGGGNSSAKYKQKVGEGLGKTKSVASNGVK 60

Query: 61 KVKEGTSIGFQWIKDKYNKTAHKK 84
          KVKEGTS+GFQWIK+KYNKTAHKK
Sbjct: 61 KVKEGTSLGFQWIKEKYNKTAHKK 84

[Close]

BLAST of PI0028675 vs. ExPASy TrEMBL
Match: A0A5A7UUQ6 (Putative CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold350G002040 PE=4 SV=1)

HSP 1 Score: 143.7 bits (361), Expect = 3.5e-31
Identity = 75/86 (87.21%), Postives = 78/86 (90.70%), Query Frame = 0


Query: 1  MAAG-NTSYDWADQWDYNDSTDVATDNKKK--SGGGNSSAKYKQKVGEGLGKTKAVASNS 60
          MAAG N+SYDWADQWDYNDS DV T+NKKK    GGNSSAKYKQKVGEGLGKTKAVASN 
Sbjct: 1  MAAGNNSSYDWADQWDYNDSADVVTNNKKKISGSGGNSSAKYKQKVGEGLGKTKAVASNG 60

Query: 61 VKKVKEGTSIGFQWIKDKYNKTAHKK 84
          VKKVKEGTS+GFQWIKDKYNKTAHKK
Sbjct: 61 VKKVKEGTSLGFQWIKDKYNKTAHKK 86

[Close]

BLAST of PI0028675 vs. ExPASy TrEMBL
Match: A0A1S3BW93 (uncharacterized protein LOC103493940 OS=Cucumis melo OX=3656 GN=LOC103493940 PE=4 SV=1)

HSP 1 Score: 143.7 bits (361), Expect = 3.5e-31
Identity = 75/86 (87.21%), Postives = 78/86 (90.70%), Query Frame = 0


Query: 1  MAAG-NTSYDWADQWDYNDSTDVATDNKKK--SGGGNSSAKYKQKVGEGLGKTKAVASNS 60
          MAAG N+SYDWADQWDYNDS DV T+NKKK    GGNSSAKYKQKVGEGLGKTKAVASN 
Sbjct: 1  MAAGNNSSYDWADQWDYNDSADVVTNNKKKISGSGGNSSAKYKQKVGEGLGKTKAVASNG 60

Query: 61 VKKVKEGTSIGFQWIKDKYNKTAHKK 84
          VKKVKEGTS+GFQWIKDKYNKTAHKK
Sbjct: 61 VKKVKEGTSLGFQWIKDKYNKTAHKK 86

[Close]

BLAST of PI0028675 vs. ExPASy TrEMBL
Match: A0A6J1E6S2 (uncharacterized protein LOC111429929 OS=Cucurbita moschata OX=3662 GN=LOC111429929 PE=4 SV=1)

HSP 1 Score: 142.5 bits (358), Expect = 7.9e-31
Identity = 69/81 (85.19%), Postives = 75/81 (92.59%), Query Frame = 0


Query: 3  AGNTSYDWADQWDYNDSTDVATDNKKKSGGGNSSAKYKQKVGEGLGKTKAVASNSVKKVK 62
          AGN SYDWADQWDY+DS DV T+N KKSGGGN++ KYKQKVGEGLGKTKAVASN VKKVK
Sbjct: 2  AGNGSYDWADQWDYSDSKDVVTENTKKSGGGNTTTKYKQKVGEGLGKTKAVASNGVKKVK 61

Query: 63 EGTSIGFQWIKDKYNKTAHKK 84
          +GTS+GFQWIKDKYNKTAHKK
Sbjct: 62 QGTSLGFQWIKDKYNKTAHKK 82

[Close]

BLAST of PI0028675 vs. ExPASy TrEMBL
Match: A0A6J1JCZ5 (uncharacterized protein LOC111485668 OS=Cucurbita maxima OX=3661 GN=LOC111485668 PE=4 SV=1)

HSP 1 Score: 139.0 bits (349), Expect = 8.7e-30
Identity = 70/82 (85.37%), Postives = 75/82 (91.46%), Query Frame = 0


Query: 3   AGNTSYDWADQWDYNDSTDVATDNKKKS-GGGNSSAKYKQKVGEGLGKTKAVASNSVKKV 62
           AGN SYDWADQWDY+DS DV T+ KKKS GGGN++ KYKQKVGEGLGKTKAVASN VKKV
Sbjct: 40  AGNGSYDWADQWDYSDSKDVVTETKKKSGGGGNTTTKYKQKVGEGLGKTKAVASNGVKKV 99

Query: 63  KEGTSIGFQWIKDKYNKTAHKK 84
           KEGTS+GFQWIKDKYNKTAHKK
Sbjct: 100 KEGTSLGFQWIKDKYNKTAHKK 121

[Close]

BLAST of PI0028675 vs. NCBI nr
Match: XP_011659007.1 (uncharacterized protein LOC105436119 [Cucumis sativus])

HSP 1 Score: 150.6 bits (379), Expect = 6.0e-33
Identity = 75/84 (89.29%), Postives = 81/84 (96.43%), Query Frame = 0


Query: 1  MAAG-NTSYDWADQWDYNDSTDVATDNKKKSGGGNSSAKYKQKVGEGLGKTKAVASNSVK 60
          MAAG NTSYDWADQWDY+DSTDV +DNKKK+GGGNSSAKYKQKVGEGLGKTK+VASN VK
Sbjct: 1  MAAGNNTSYDWADQWDYSDSTDVVSDNKKKTGGGNSSAKYKQKVGEGLGKTKSVASNGVK 60

Query: 61 KVKEGTSIGFQWIKDKYNKTAHKK 84
          KVKEGTS+GFQWIK+KYNKTAHKK
Sbjct: 61 KVKEGTSLGFQWIKEKYNKTAHKK 84

[Close]

BLAST of PI0028675 vs. NCBI nr
Match: XP_038879790.1 (uncharacterized protein LOC120071534 [Benincasa hispida])

HSP 1 Score: 149.4 bits (376), Expect = 1.3e-32
Identity = 73/81 (90.12%), Postives = 77/81 (95.06%), Query Frame = 0


Query: 3  AGNTSYDWADQWDYNDSTDVATDNKKKSGGGNSSAKYKQKVGEGLGKTKAVASNSVKKVK 62
          A N SYDWADQWDYNDSTDV T+NKKKSGGGNS+AKYKQKVGEGLGKTKAVASN VK+VK
Sbjct: 2  AANGSYDWADQWDYNDSTDVVTENKKKSGGGNSTAKYKQKVGEGLGKTKAVASNGVKRVK 61

Query: 63 EGTSIGFQWIKDKYNKTAHKK 84
          EGTS+GFQWIKDKYNKTAHKK
Sbjct: 62 EGTSLGFQWIKDKYNKTAHKK 82

[Close]

BLAST of PI0028675 vs. NCBI nr
Match: KGN63621.2 (hypothetical protein Csa_013074 [Cucumis sativus])

HSP 1 Score: 148.7 bits (374), Expect = 2.3e-32
Identity = 74/83 (89.16%), Postives = 80/83 (96.39%), Query Frame = 0


Query: 1  MAAG-NTSYDWADQWDYNDSTDVATDNKKKSGGGNSSAKYKQKVGEGLGKTKAVASNSVK 60
          MAAG NTSYDWADQWDY+DSTDV +DNKKK+GGGNSSAKYKQKVGEGLGKTK+VASN VK
Sbjct: 1  MAAGNNTSYDWADQWDYSDSTDVVSDNKKKTGGGNSSAKYKQKVGEGLGKTKSVASNGVK 60

Query: 61 KVKEGTSIGFQWIKDKYNKTAHK 83
          KVKEGTS+GFQWIK+KYNKTAHK
Sbjct: 61 KVKEGTSLGFQWIKEKYNKTAHK 83

[Close]

BLAST of PI0028675 vs. NCBI nr
Match: XP_023516550.1 (uncharacterized protein LOC111780400 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 144.1 bits (362), Expect = 5.6e-31
Identity = 70/81 (86.42%), Postives = 76/81 (93.83%), Query Frame = 0


Query: 3   AGNTSYDWADQWDYNDSTDVATDNKKKSGGGNSSAKYKQKVGEGLGKTKAVASNSVKKVK 62
           AG+ SYDWADQWDY+DS DV T+NKKKSGGGN++ KYKQKVGEGLGKTKAVASN VKKVK
Sbjct: 40  AGSGSYDWADQWDYSDSKDVVTENKKKSGGGNTTTKYKQKVGEGLGKTKAVASNGVKKVK 99

Query: 63  EGTSIGFQWIKDKYNKTAHKK 84
           EGTS+GFQWIKDKYNKTAHKK
Sbjct: 100 EGTSLGFQWIKDKYNKTAHKK 120

[Close]

BLAST of PI0028675 vs. NCBI nr
Match: XP_008453134.1 (PREDICTED: uncharacterized protein LOC103493940 [Cucumis melo] >KAA0057896.1 putative CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase [Cucumis melo var. makuwa] >TYJ98584.1 putative CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase [Cucumis melo var. makuwa])

HSP 1 Score: 143.7 bits (361), Expect = 7.3e-31
Identity = 75/86 (87.21%), Postives = 78/86 (90.70%), Query Frame = 0


Query: 1  MAAG-NTSYDWADQWDYNDSTDVATDNKKK--SGGGNSSAKYKQKVGEGLGKTKAVASNS 60
          MAAG N+SYDWADQWDYNDS DV T+NKKK    GGNSSAKYKQKVGEGLGKTKAVASN 
Sbjct: 1  MAAGNNSSYDWADQWDYNDSADVVTNNKKKISGSGGNSSAKYKQKVGEGLGKTKAVASNG 60

Query: 61 VKKVKEGTSIGFQWIKDKYNKTAHKK 84
          VKKVKEGTS+GFQWIKDKYNKTAHKK
Sbjct: 61 VKKVKEGTSLGFQWIKDKYNKTAHKK 86

[Close]

BLAST of PI0028675 vs. TAIR 10
Match: AT3G48180.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G19020.1); Has 84 Blast hits to 84 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 84; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 81.3 bits (199), Expect = 4.1e-16
Identity = 42/73 (57.53%), Postives = 53/73 (72.60%), Query Frame = 0


Query: 10 WADQWDYNDSTDVATDNKKKSGGGNSSAKYKQKVGEGLGKTKAVASNSVKKVKEGTSIGF 69
          WA+QWD N  +   T +  +  GG +S+KYK+KVG GLGKTKA AS+ +KKVK GTS+G 
Sbjct: 6  WAEQWDSNQQSSGKTTHGGE--GGGASSKYKEKVGAGLGKTKAAASSGLKKVKIGTSLGL 65

Query: 70 QWIKDKYNKTAHK 83
           W+KDKYNKT  K
Sbjct: 66 NWVKDKYNKTTTK 76

[Close]

BLAST of PI0028675 vs. TAIR 10
Match: AT1G19020.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G48180.1); Has 88 Blast hits to 88 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 88; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 75.1 bits (183), Expect = 3.0e-14
Identity = 39/81 (48.15%), Postives = 55/81 (67.90%), Query Frame = 0


Query: 10 WADQWDYNDST-------DVATDNKKKSGGGNSSAKYKQKVGEGLGKTKAVASNSVKKVK 69
          WADQWD +  +         A      SG  +++ KYK+K+G+GL KTKAVAS+  KK+K
Sbjct: 6  WADQWDNSGDSAKGGRIGSGAVVRSSGSGATSNTTKYKEKMGQGLDKTKAVASSGFKKLK 65

Query: 70 EGTSIGFQWIKDKYNKTAHKK 84
           G++IGF+W+KDKY+KT HK+
Sbjct: 66 TGSAIGFRWVKDKYHKTTHKQ 86

The following BLAST results are available for this feature:

BLAST of PI0028675 vs.


Match Name	E-value	Identity	Description

BLAST of PI0028675 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LUC7	2.9e-33	89.29	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G005770 PE=4 SV=1	[more]
A0A5A7UUQ6	3.5e-31	87.21	Putative CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase OS=C...	[more]
A0A1S3BW93	3.5e-31	87.21	uncharacterized protein LOC103493940 OS=Cucumis melo OX=3656 GN=LOC103493940 PE=...	[more]
A0A6J1E6S2	7.9e-31	85.19	uncharacterized protein LOC111429929 OS=Cucurbita moschata OX=3662 GN=LOC1114299...	[more]
A0A6J1JCZ5	8.7e-30	85.37	uncharacterized protein LOC111485668 OS=Cucurbita maxima OX=3661 GN=LOC111485668...	[more]

BLAST of PI0028675 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011659007.1	6.0e-33	89.29	uncharacterized protein LOC105436119 [Cucumis sativus]	[more]
XP_038879790.1	1.3e-32	90.12	uncharacterized protein LOC120071534 [Benincasa hispida]	[more]
KGN63621.2	2.3e-32	89.16	hypothetical protein Csa_013074 [Cucumis sativus]	[more]
XP_023516550.1	5.6e-31	86.42	uncharacterized protein LOC111780400 [Cucurbita pepo subsp. pepo]	[more]
XP_008453134.1	7.3e-31	87.21	PREDICTED: uncharacterized protein LOC103493940 [Cucumis melo] >KAA0057896.1 put...	[more]

BLAST of PI0028675 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G48180.1	4.1e-16	57.53	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT1G19020.1	3.0e-14	48.15	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 10..37
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..46
None	No IPR available	PANTHER	PTHR33386	OS02G0740600 PROTEIN	coord: 5..81
None	No IPR available	PANTHER	PTHR33386:SF5	OS02G0740600 PROTEIN	coord: 5..81

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0028675.1	PI0028675.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0030639	polyketide biosynthetic process
molecular_function	GO:0016747	acyltransferase activity, transferring groups other than amino-acyl groups