PI0028421 (gene) Melon (PI 482460) v1

Overview


Name	PI0028421
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Transcription termination factor MTEF1
Location	chr06: 4901414 .. 4902889 (+)
RNA-Seq Expression	PI0028421
Synteny	PI0028421

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCTTCCTTTTCTTATTTTATTTCTTCTCTCCTACTCTCCCACTCTCCCACTCCGACCGTCGCCGATGCTTCCCCGCCGCCCATTTTTCTTTTCTTTTCTCTCATAGCTTCATCCTCTTCTTAGGCTTTTCTACTTTCTCCCATTCTTCTTCTCAACAAGGAACCAACAGGTCTGTTTTCCTTATCCTACCTCTTCTTACACTCATGTCTAACTTGTTTCGCACTATCATTCTACTTAGATCTCCATCCTCTGTCTCTACTCACGGATTTTTCGTAAGTCCCTTGAAATGTCTCAGATACTTATCGACCTCTTCTGAGATTATATCATCTCCGACATCTGCCTCGTTGGTTTCTAATGTTGTTCAGCTCAAGAACAATCCGAAGGCTGTTTTCATAAAAATAAAGAACAGTCGGGAGGCTGTAATTGCGTTTCTTCAGAATCATGGATTCTCTGAATCACAAATCTCTGACCTTGCCAAGAGGGCTCCTCGAGTTCTTTCTGCGAACCCCGAGAAAATCCTATTGCCCAAATTGTTGTTTTTGCAATCTAAAGGTCTTTCTTCCCCAGAGATTGTCAAAATAATATGTTCAGTTCCTAGTGTTTTATATGGAAGTTTAGACAGACGAATTATTCCAGCCTTTGATTACATTCAAGCCGTGCTTAGAACCGAGGAGAAGACTCTCGCTGCCATAAAACGCTTTGCGGGTATTCTCACTTTTGATCTTCGAGTTTTAGTTGGTCCCAATATTGAAATTCTGAAACAAAGTGGAGTGCCGGATTCAAATATTTTAACTTATCTTCAGCGGCAGCCTAAAATGTTCTTGACAAGTTCCATCCGATTCAAGGAGATTGTGGAGAGAGTTAAGGAAATGGGATTCGATCCTCAACGATTACAGTTTGTTGTTGCTGTTTTTGCCATGCGATCAATGACCAAATCTACATGGGATAAGAAGGTTGAAGTTTATAGGAAATGGGGATTGTCTGAAGAAGAGACCCATTTAGCTTTTAGAACGCATCAATGGTGTATGGCGGTATCTGAGGATAAGATTAATGGTGCAATGGATTTTTTTGTCAACAAAATTGGATGGGAACCATCTTTGGTTGCTAGAAGATCAATTTTACTTTCACTTAGTTTGAAGAAGAGGATTTTGCCTAGAGGCTATGTTTATCAAGCTCTGCGGTCAAAGGGTTTGATTAAAAAAGGCATAAATTTCTTTATGTATTCTGATAATCTTTTCATAGACAAATTCATCAAACCTCATAAGGAGCAGATTCCTGGATTGTTGGAGTTGTATGAAGAGAAATTAATGGATTCTAGAAGATGAAACAGGTTTGATCTCCTTGAGATTTTAATATTTAACTGTTTTGTTCATATTTAAATGTCTGGACAACTAAAATTTATGGATTGACTTGGTATCTTTTTTCTATCCCTTCTTTTTGTTCATCCTTAGTTTGTATCTTCCTTATGGCTTCTCA

mRNA sequence

CCTTCCTTTTCTTATTTTATTTCTTCTCTCCTACTCTCCCACTCTCCCACTCCGACCGTCGCCGATGCTTCCCCGCCGCCCATTTTTCTTTTCTTTTCTCTCATAGCTTCATCCTCTTCTTAGGCTTTTCTACTTTCTCCCATTCTTCTTCTCAACAAGGAACCAACAGGTCTGTTTTCCTTATCCTACCTCTTCTTACACTCATGTCTAACTTGTTTCGCACTATCATTCTACTTAGATCTCCATCCTCTGTCTCTACTCACGGATTTTTCGTAAGTCCCTTGAAATGTCTCAGATACTTATCGACCTCTTCTGAGATTATATCATCTCCGACATCTGCCTCGTTGGTTTCTAATGTTGTTCAGCTCAAGAACAATCCGAAGGCTGTTTTCATAAAAATAAAGAACAGTCGGGAGGCTGTAATTGCGTTTCTTCAGAATCATGGATTCTCTGAATCACAAATCTCTGACCTTGCCAAGAGGGCTCCTCGAGTTCTTTCTGCGAACCCCGAGAAAATCCTATTGCCCAAATTGTTGTTTTTGCAATCTAAAGGTCTTTCTTCCCCAGAGATTGTCAAAATAATATGTTCAGTTCCTAGTGTTTTATATGGAAGTTTAGACAGACGAATTATTCCAGCCTTTGATTACATTCAAGCCGTGCTTAGAACCGAGGAGAAGACTCTCGCTGCCATAAAACGCTTTGCGGGTATTCTCACTTTTGATCTTCGAGTTTTAGTTGGTCCCAATATTGAAATTCTGAAACAAAGTGGAGTGCCGGATTCAAATATTTTAACTTATCTTCAGCGGCAGCCTAAAATGTTCTTGACAAGTTCCATCCGATTCAAGGAGATTGTGGAGAGAGTTAAGGAAATGGGATTCGATCCTCAACGATTACAGTTTGTTGTTGCTGTTTTTGCCATGCGATCAATGACCAAATCTACATGGGATAAGAAGGTTGAAGTTTATAGGAAATGGGGATTGTCTGAAGAAGAGACCCATTTAGCTTTTAGAACGCATCAATGGTGTATGGCGGTATCTGAGGATAAGATTAATGGTGCAATGGATTTTTTTGTCAACAAAATTGGATGGGAACCATCTTTGGTTGCTAGAAGATCAATTTTACTTTCACTTAGTTTGAAGAAGAGGATTTTGCCTAGAGGCTATGTTTATCAAGCTCTGCGGTCAAAGGGTTTGATTAAAAAAGGCATAAATTTCTTTATGTATTCTGATAATCTTTTCATAGACAAATTCATCAAACCTCATAAGGAGCAGATTCCTGGATTGTTGGAGTTGTATGAAGAGAAATTAATGGATTCTAGAAGATGAAACAGGTTTGATCTCCTTGAGATTTTAATATTTAACTGTTTTGTTCATATTTAAATGTCTGGACAACTAAAATTTATGGATTGACTTGGTATCTTTTTTCTATCCCTTCTTTTTGTTCATCCTTAGTTTGTATCTTCCTTATGGCTTCTCA

Coding sequence (CDS)

ATGTCTAACTTGTTTCGCACTATCATTCTACTTAGATCTCCATCCTCTGTCTCTACTCACGGATTTTTCGTAAGTCCCTTGAAATGTCTCAGATACTTATCGACCTCTTCTGAGATTATATCATCTCCGACATCTGCCTCGTTGGTTTCTAATGTTGTTCAGCTCAAGAACAATCCGAAGGCTGTTTTCATAAAAATAAAGAACAGTCGGGAGGCTGTAATTGCGTTTCTTCAGAATCATGGATTCTCTGAATCACAAATCTCTGACCTTGCCAAGAGGGCTCCTCGAGTTCTTTCTGCGAACCCCGAGAAAATCCTATTGCCCAAATTGTTGTTTTTGCAATCTAAAGGTCTTTCTTCCCCAGAGATTGTCAAAATAATATGTTCAGTTCCTAGTGTTTTATATGGAAGTTTAGACAGACGAATTATTCCAGCCTTTGATTACATTCAAGCCGTGCTTAGAACCGAGGAGAAGACTCTCGCTGCCATAAAACGCTTTGCGGGTATTCTCACTTTTGATCTTCGAGTTTTAGTTGGTCCCAATATTGAAATTCTGAAACAAAGTGGAGTGCCGGATTCAAATATTTTAACTTATCTTCAGCGGCAGCCTAAAATGTTCTTGACAAGTTCCATCCGATTCAAGGAGATTGTGGAGAGAGTTAAGGAAATGGGATTCGATCCTCAACGATTACAGTTTGTTGTTGCTGTTTTTGCCATGCGATCAATGACCAAATCTACATGGGATAAGAAGGTTGAAGTTTATAGGAAATGGGGATTGTCTGAAGAAGAGACCCATTTAGCTTTTAGAACGCATCAATGGTGTATGGCGGTATCTGAGGATAAGATTAATGGTGCAATGGATTTTTTTGTCAACAAAATTGGATGGGAACCATCTTTGGTTGCTAGAAGATCAATTTTACTTTCACTTAGTTTGAAGAAGAGGATTTTGCCTAGAGGCTATGTTTATCAAGCTCTGCGGTCAAAGGGTTTGATTAAAAAAGGCATAAATTTCTTTATGTATTCTGATAATCTTTTCATAGACAAATTCATCAAACCTCATAAGGAGCAGATTCCTGGATTGTTGGAGTTGTATGAAGAGAAATTAATGGATTCTAGAAGATGA

Protein sequence

MSNLFRTIILLRSPSSVSTHGFFVSPLKCLRYLSTSSEIISSPTSASLVSNVVQLKNNPKAVFIKIKNSREAVIAFLQNHGFSESQISDLAKRAPRVLSANPEKILLPKLLFLQSKGLSSPEIVKIICSVPSVLYGSLDRRIIPAFDYIQAVLRTEEKTLAAIKRFAGILTFDLRVLVGPNIEILKQSGVPDSNILTYLQRQPKMFLTSSIRFKEIVERVKEMGFDPQRLQFVVAVFAMRSMTKSTWDKKVEVYRKWGLSEEETHLAFRTHQWCMAVSEDKINGAMDFFVNKIGWEPSLVARRSILLSLSLKKRILPRGYVYQALRSKGLIKKGINFFMYSDNLFIDKFIKPHKEQIPGLLELYEEKLMDSRR

Homology

[Close]

BLAST of PI0028421 vs. ExPASy TrEMBL
Match: A0A5A7U2M1 (Transcription termination factor MTEF1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold209G00920 PE=3 SV=1)

HSP 1 Score: 518.1 bits (1333), Expect = 3.1e-143
Identity = 272/370 (73.51%), Postives = 306/370 (82.70%), Query Frame = 0


Query: 1   MSNLFRTIILLRSPSSVSTHGFFVSPLKCLRYLSTSSEIISSPTSASLVSNVVQLKNNPK 60
           MS LFR I+LLRSPSSV +HGF   PLK LR+LSTSSE++SSP SASL SN V LKNN  
Sbjct: 1   MSYLFRRILLLRSPSSVFSHGFSECPLKSLRFLSTSSEVVSSPKSASLASNAVWLKNN-- 60

Query: 61  AVFIKIKNSREAVIAFLQNHGFSESQISDLAKRAPRVLSANPEKILLPKLLFLQSKGLSS 120
                    R+ VIA L NHGFS+SQISDLAKR P++ SANPE+ LLPKLLFLQSKGLSS
Sbjct: 61  ---------RKDVIALLANHGFSQSQISDLAKRLPQIFSANPEESLLPKLLFLQSKGLSS 120

Query: 121 PEIVKIICSVPSVLYGSLDRRIIPAFDYIQAVLRTEEKTLAAIKRFAGILTFDLRVLVGP 180
           P+IVK +C+ P VL GSL++RIIPAFDYIQAVL TEEK +AAIKRFAGILT DLR+ VGP
Sbjct: 121 PQIVKSVCAFPCVLTGSLNKRIIPAFDYIQAVLGTEEKAVAAIKRFAGILTQDLRISVGP 180

Query: 181 NIEILKQSGVPDSNILTYLQRQPKMFLTSSIRFKEIVERVKEMGFDPQRLQFVVAVFAMR 240
           NIEILKQ GVPDSNI TYLQ+QP+MF  SSIRFKEIVERV EMGF+P+RLQF+VAVFA+R
Sbjct: 181 NIEILKQIGVPDSNISTYLQQQPRMFFVSSIRFKEIVERVTEMGFNPERLQFLVAVFALR 240

Query: 241 SMTKSTWDKKVEVYRKWGLSEEETHLAFRTHQWCMAVSEDKINGAMDFFVNKIGWEPSLV 300
           SMTKSTWDKKVEVYRKWGLSEEE  LAFR + W M  SEDKIN  MDFFVNKIG E  LV
Sbjct: 241 SMTKSTWDKKVEVYRKWGLSEEEIRLAFRKNPWGMRASEDKINDVMDFFVNKIGCESFLV 300

Query: 301 ARRSILLSLSLKKRILPRGYVYQALRSKGLIKKGINFFMYSDNLFIDKFIKPHKEQIPGL 360
           ARR +L++LSLKKRILPRGY+YQ L SKGLIK   + F  S+N FI+KFI PHKEQIPGL
Sbjct: 301 ARRPVLIALSLKKRILPRGYIYQVLLSKGLIKNFSSLFHCSENRFIEKFINPHKEQIPGL 359

Query: 361 LELYEEKLMD 371
           L+LY++KLMD
Sbjct: 361 LDLYKQKLMD 359

[Close]

BLAST of PI0028421 vs. ExPASy TrEMBL
Match: A0A5A7U7J7 (Transcription termination factor MTEF1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold209G00730 PE=3 SV=1)

HSP 1 Score: 516.5 bits (1329), Expect = 9.0e-143
Identity = 277/376 (73.67%), Postives = 301/376 (80.05%), Query Frame = 0


Query: 1   MSNLFRTIILLRSPSSVSTHGFFVSPLKCLRYLSTSSEIISSPTSASLVSNVVQLKNNPK 60
           MSN+FR I+LLRSPS V   GF  SPLK LRYLSTSSEI+SSP SA L SN VQL     
Sbjct: 1   MSNVFRRILLLRSPSPVFPQGFSQSPLKSLRYLSTSSEIVSSPESAPLASNAVQL----- 60

Query: 61  AVFIKIKNSREAVIAFLQNHGFSESQISDLAKRAPRVLSANPEKILLPKLLFLQSKGLSS 120
                 KN R+AVIA L +HGFSESQIS L KR P++LSANPEKILLPKLLF QSKGLSS
Sbjct: 61  ------KNKRKAVIALLADHGFSESQISSLDKRYPQILSANPEKILLPKLLFFQSKGLSS 120

Query: 121 PEIVKIICSVPSVLYGSLDRRIIPAFDYIQAVLRTEEKTLAAIKRFAGILTFDLRVLVGP 180
           PEI K++CS P VL GSLD RIIPAFDYIQAVL +EEKTLA IK F  ILT DLR+ VGP
Sbjct: 121 PEIAKLVCSFPRVLAGSLDNRIIPAFDYIQAVLGSEEKTLAFIKYFGSILTHDLRISVGP 180

Query: 181 NIEILKQSGVPDSNILTYLQRQPKMFLTSSIRFKEIVERVKEMGFDPQRLQFVVAVFAMR 240
           NIEILKQ GVPDSNIL Y Q QP++F  +SIRFKE VERV EMGF+PQRLQF+VAVFA+R
Sbjct: 181 NIEILKQIGVPDSNILKYFQYQPRVFSRNSIRFKETVERVTEMGFNPQRLQFLVAVFALR 240

Query: 241 SMTKSTWDKKVEVYRKWGLSEEETHLAFRTHQWCMAVSEDKINGAMDFFVNKIGWEPSLV 300
           +MTKSTWDKKVEVYRKWGLSEEE  LAF+ H WCM VSEDKINGAMDFFVNKIG E S V
Sbjct: 241 AMTKSTWDKKVEVYRKWGLSEEEICLAFKRHPWCMMVSEDKINGAMDFFVNKIGCESSFV 300

Query: 301 ARRSILLSLSLKKRILPRGYVYQALRSKGLIKKGIN---FFMYSDNLFIDKFIKPHKEQI 360
           ARR  L+SLSLKKR+ PRGYVYQ L  KGLIKK  N   F   S+N FIDKFI PHKE+I
Sbjct: 301 ARRPALISLSLKKRLNPRGYVYQVLLEKGLIKKQANIPLFVSSSENRFIDKFINPHKEKI 360

Query: 361 PGLLELYEEKLMDSRR 374
           PGLLE YE+KLMDSRR
Sbjct: 361 PGLLESYEQKLMDSRR 365

[Close]

BLAST of PI0028421 vs. ExPASy TrEMBL
Match: A0A5A7U124 (Transcription termination factor MTEF1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold209G00780 PE=3 SV=1)

HSP 1 Score: 515.4 bits (1326), Expect = 2.0e-142
Identity = 275/377 (72.94%), Postives = 310/377 (82.23%), Query Frame = 0


Query: 1   MSNLFRTIILLRSPSSVSTHGFFVSPLKCLRYLSTSSEIISSPTSASLVSNVVQLKNNPK 60
           MS LFR I+LLRSPSSV +HGF  SPLK LR+LSTSSEI+SSP SASL SN VQL+NN  
Sbjct: 1   MSYLFRRILLLRSPSSVFSHGFSESPLKSLRFLSTSSEIVSSPKSASLASNAVQLENN-- 60

Query: 61  AVFIKIKNSREAVIAFLQNHGFSESQISDLAKRAPRVLSANPEKILLPKLLFLQSKGLSS 120
                    R+AVI  L NHGFS+SQISD+ +R P++L+ANPEKILLPKLLF QSKGLSS
Sbjct: 61  ---------RKAVIELLANHGFSQSQISDIGRRRPQILAANPEKILLPKLLFFQSKGLSS 120

Query: 121 PEIVKIICSVPSVLYGSLDRRIIPAFDYIQAVLRTEEKTLAAIKRFAGILTFDLRVLVGP 180
           PEI K++C+ P VL GSL++RII  FDYIQAVL +EEKTLAAIK+FAGIL  DL++ VGP
Sbjct: 121 PEIAKLVCTFPYVLTGSLNKRIIYNFDYIQAVLGSEEKTLAAIKQFAGILARDLQISVGP 180

Query: 181 NIEILKQSGVPDSNILTYLQRQPKMFLTSSIRFKEIVERVKEMGFDPQRLQFVVAVFAMR 240
           NIEILKQ GVPDSNIL YLQ QP++F+ SSIRFKEIVERV EMGF+PQRLQF+VAVFA+R
Sbjct: 181 NIEILKQIGVPDSNILKYLQYQPRVFIISSIRFKEIVERVTEMGFNPQRLQFLVAVFALR 240

Query: 241 SMTKSTWDKKVEVYRKWGLSEEETHLAFRTHQWCMAVSEDKINGAMDFFVNKIGWEPSLV 300
           +MTKSTWDKKVEVYRKWGLSEEE  LAF+ H WCM VSEDKINGAMDFFVNKIG E S V
Sbjct: 241 AMTKSTWDKKVEVYRKWGLSEEEICLAFKRHPWCMMVSEDKINGAMDFFVNKIGCESSFV 300

Query: 301 ARRSILLSLSLKKRILPRGYVYQALRSKGLIKKGIN---FFMYSDNLFIDKFIKPHK-EQ 360
           ARR  L+SLSLKKR+ PRGYVYQ L  KGLIKK  N   F   S+  FI+KFI PHK EQ
Sbjct: 301 ARRPALISLSLKKRLNPRGYVYQVLLEKGLIKKQANIPLFVSSSEKRFIEKFINPHKEEQ 360

Query: 361 IPGLLELYEEKLMDSRR 374
           IPGLLELY++KLMDSRR
Sbjct: 361 IPGLLELYKQKLMDSRR 366

[Close]

BLAST of PI0028421 vs. ExPASy TrEMBL
Match: A0A1S3AYM0 (uncharacterized protein LOC103484197 OS=Cucumis melo OX=3656 GN=LOC103484197 PE=3 SV=1)

HSP 1 Score: 515.4 bits (1326), Expect = 2.0e-142
Identity = 275/377 (72.94%), Postives = 310/377 (82.23%), Query Frame = 0


Query: 1   MSNLFRTIILLRSPSSVSTHGFFVSPLKCLRYLSTSSEIISSPTSASLVSNVVQLKNNPK 60
           MS LFR I+LLRSPSSV +HGF  SPLK LR+LSTSSEI+SSP SASL SN VQL+NN  
Sbjct: 1   MSYLFRRILLLRSPSSVFSHGFSESPLKSLRFLSTSSEIVSSPKSASLASNAVQLENN-- 60

Query: 61  AVFIKIKNSREAVIAFLQNHGFSESQISDLAKRAPRVLSANPEKILLPKLLFLQSKGLSS 120
                    R+AVI  L NHGFS+SQISD+ +R P++L+ANPEKILLPKLLF QSKGLSS
Sbjct: 61  ---------RKAVIELLANHGFSQSQISDIGRRRPQILAANPEKILLPKLLFFQSKGLSS 120

Query: 121 PEIVKIICSVPSVLYGSLDRRIIPAFDYIQAVLRTEEKTLAAIKRFAGILTFDLRVLVGP 180
           PEI K++C+ P VL GSL++RII  FDYIQAVL +EEKTLAAIK+FAGIL  DL++ VGP
Sbjct: 121 PEIAKLVCTFPYVLTGSLNKRIIYNFDYIQAVLGSEEKTLAAIKQFAGILARDLQISVGP 180

Query: 181 NIEILKQSGVPDSNILTYLQRQPKMFLTSSIRFKEIVERVKEMGFDPQRLQFVVAVFAMR 240
           NIEILKQ GVPDSNIL YLQ QP++F+ SSIRFKEIVERV EMGF+PQRLQF+VAVFA+R
Sbjct: 181 NIEILKQIGVPDSNILKYLQYQPRVFIISSIRFKEIVERVTEMGFNPQRLQFLVAVFALR 240

Query: 241 SMTKSTWDKKVEVYRKWGLSEEETHLAFRTHQWCMAVSEDKINGAMDFFVNKIGWEPSLV 300
           +MTKSTWDKKVEVYRKWGLSEEE  LAF+ H WCM VSEDKINGAMDFFVNKIG E S V
Sbjct: 241 AMTKSTWDKKVEVYRKWGLSEEEICLAFKRHPWCMMVSEDKINGAMDFFVNKIGCESSFV 300

Query: 301 ARRSILLSLSLKKRILPRGYVYQALRSKGLIKKGIN---FFMYSDNLFIDKFIKPHK-EQ 360
           ARR  L+SLSLKKR+ PRGYVYQ L  KGLIKK  N   F   S+  FI+KFI PHK EQ
Sbjct: 301 ARRPALISLSLKKRLNPRGYVYQVLLEKGLIKKQANIPLFVSSSEKRFIEKFINPHKEEQ 360

Query: 361 IPGLLELYEEKLMDSRR 374
           IPGLLELY++KLMDSRR
Sbjct: 361 IPGLLELYKQKLMDSRR 366

[Close]

BLAST of PI0028421 vs. ExPASy TrEMBL
Match: A0A1S4DSR4 (uncharacterized protein LOC103483819 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103483819 PE=3 SV=1)

HSP 1 Score: 512.7 bits (1319), Expect = 1.3e-141
Identity = 271/376 (72.07%), Postives = 305/376 (81.12%), Query Frame = 0


Query: 1   MSNLFRTIILLRSPSSVSTHGFFVSPLKCLRYLSTSSEIISSPTSASLVSNVVQLKNNPK 60
           MSNLFR I+LLRSPSSV +HGF   PLK LR+LSTSSEI+SSP SASL SNVVQ+KNN K
Sbjct: 1   MSNLFRRILLLRSPSSVFSHGFSECPLKSLRFLSTSSEIVSSPKSASLASNVVQIKNNRK 60

Query: 61  AVFIKIKNSREAVIAFLQNHGFSESQISDLAKRAPRVLSANPEKILLPKLLFLQSKGLSS 120
           A F           +F +NHGFSESQISD+ K+ P++LSANPEKILLPKLLF +SKGLSS
Sbjct: 61  AAF-----------SFFENHGFSESQISDIDKKFPQILSANPEKILLPKLLFFRSKGLSS 120

Query: 121 PEIVKIICSVPSVLYGSLDRRIIPAFDYIQAVLRTEEKTLAAIKRFAGILTFDLRVLVGP 180
           PEI KI+ S P VL GSL+ RIIPAFDYIQAVL +EEKTL  IK FAGILT DLR+ VGP
Sbjct: 121 PEIAKIVYSFPYVLSGSLNNRIIPAFDYIQAVLGSEEKTLTLIKYFAGILTQDLRISVGP 180

Query: 181 NIEILKQSGVPDSNILTYLQRQPKMFLTSSIRFKEIVERVKEMGFDPQRLQFVVAVFAMR 240
           NIEILKQ GVPDSNI  YLQ +P++FLT+ IRFKE V+RV EMGF+PQ+LQFVVAVF +R
Sbjct: 181 NIEILKQIGVPDSNIFKYLQYRPRVFLTNPIRFKETVDRVTEMGFNPQQLQFVVAVFILR 240

Query: 241 SMTKSTWDKKVEVYRKWGLSEEETHLAFRTHQWCMAVSEDKINGAMDFFVNKIGWEPSLV 300
           S+TKSTWDKKVEVYRKWGLSEEE  LAF+ H WCM VSEDKING MDFFVNKIG E S V
Sbjct: 241 SLTKSTWDKKVEVYRKWGLSEEEICLAFKRHPWCMMVSEDKINGVMDFFVNKIGCESSFV 300

Query: 301 ARRSILLSLSLKKRILPRGYVYQALRSKGLIKKGINFFMY---SDNLFIDKFIKPHKEQI 360
           A R +L+SLSLKKRI PRGYVYQ L +KGLIKK  +  M+   S+  FI+K I PHKEQI
Sbjct: 301 ASRPVLISLSLKKRIFPRGYVYQVLLAKGLIKKHADITMFVKCSEKHFIEKIIDPHKEQI 360

Query: 361 PGLLELYEEKLMDSRR 374
           PGLLE YE+KLMDSRR
Sbjct: 361 PGLLESYEQKLMDSRR 365

[Close]

BLAST of PI0028421 vs. NCBI nr
Match: XP_031738239.1 (transcription termination factor MTERF6, chloroplastic/mitochondrial [Cucumis sativus] >KAE8650392.1 hypothetical protein Csa_010055 [Cucumis sativus])

HSP 1 Score: 521.2 bits (1341), Expect = 7.6e-144
Identity = 280/373 (75.07%), Postives = 307/373 (82.31%), Query Frame = 0


Query: 1   MSNLFRTIILLRSPSSVSTHGFFVSPLKCLRYLSTSSEIISSPTSASLVSNVVQLKNNPK 60
           MSN FRTI+LLRSPSS+ +HGF  SP K LRYLSTSSEI+SSP SASL SN VQL NN K
Sbjct: 1   MSNFFRTILLLRSPSSLFSHGFSQSPFKSLRYLSTSSEIVSSPKSASLPSNAVQLNNNSK 60

Query: 61  AVFIKIKNSREAVIAFLQNHGFSESQISDLAKRAPRVLSANPEKILLPKLLFLQSKGLSS 120
                      AVI  L NHGFSESQISDLAKR P+++S NPEKIL PKLLF QSKGLSS
Sbjct: 61  -----------AVIGLLANHGFSESQISDLAKRYPQIISMNPEKILSPKLLFFQSKGLSS 120

Query: 121 PEIVKIICSVPSVLYGSLDRRIIPAFDYIQAVLRTEEKTLAAIKRFAGILTFDLRVLVGP 180
           PEIVK++CSVP VL GSL++RIIP+FDYIQAVL +EEKTL AIKRF GIL +DLR  VGP
Sbjct: 121 PEIVKLVCSVPCVLTGSLNKRIIPSFDYIQAVLGSEEKTLTAIKRFPGILGWDLRTSVGP 180

Query: 181 NIEILKQSGVPDSNILTYLQRQPKMFLTSSIRFKEIVERVKEMGFDPQRLQFVVAVFAMR 240
           NIEILKQ GVPDSNI +YLQRQPKMFLTSSIRFK+ VERV EMGF+PQRLQFVVAVFA+R
Sbjct: 181 NIEILKQIGVPDSNISSYLQRQPKMFLTSSIRFKKAVERVTEMGFNPQRLQFVVAVFALR 240

Query: 241 SMTKSTWDKKVEVYRKWGLSEEETHLAFRTHQWCMAVSEDKINGAMDFFVNKIGWEPSLV 300
           SMTKSTWD+KVE YRKWGLSEEE  LAFR +  CM+ SEDKINGAMDFFVNK+G EP LV
Sbjct: 241 SMTKSTWDEKVEGYRKWGLSEEEIRLAFRKNPRCMSASEDKINGAMDFFVNKMGCEPFLV 300

Query: 301 ARRSILLSLSLKKRILPRGYVYQALRSKGLIKKGINFFMY---SDNLFIDKFIKPHKEQI 360
           AR   L+S SLKKRILPRGYVYQ L SK LIKK  +F ++   S NLFIDKFI PHKEQI
Sbjct: 301 ARTPTLVSYSLKKRILPRGYVYQVLVSKCLIKKYAHFALFFNSSANLFIDKFINPHKEQI 360

Query: 361 PGLLELYEEKLMD 371
           P LLELY+EKLMD
Sbjct: 361 PELLELYKEKLMD 362

[Close]

BLAST of PI0028421 vs. NCBI nr
Match: XP_031738238.1 (uncharacterized protein LOC101209993 isoform X1 [Cucumis sativus] >KAE8650390.1 hypothetical protein Csa_009998 [Cucumis sativus])

HSP 1 Score: 519.2 bits (1336), Expect = 2.9e-143
Identity = 277/373 (74.26%), Postives = 303/373 (81.23%), Query Frame = 0


Query: 1   MSNLFRTIILLRSPSSVSTHGFFVSPLKCLRYLSTSSEIISSPTSASLVSNVVQLKNNPK 60
           MSN+FRTI+LLRSPSS  +HGF  SPLK LRYL TSSEI+SSP SASL SN VQL NN K
Sbjct: 1   MSNVFRTILLLRSPSSAFSHGFSDSPLKSLRYLCTSSEIVSSPKSASLPSNPVQLNNNSK 60

Query: 61  AVFIKIKNSREAVIAFLQNHGFSESQISDLAKRAPRVLSANPEKILLPKLLFLQSKGLSS 120
                      AVI  L NHGFSESQISDLAKR P++ S N EKIL PKLLF QSKGLSS
Sbjct: 61  -----------AVIGLLANHGFSESQISDLAKRYPKIFSMNTEKILSPKLLFFQSKGLSS 120

Query: 121 PEIVKIICSVPSVLYGSLDRRIIPAFDYIQAVLRTEEKTLAAIKRFAGILTFDLRVLVGP 180
           PEIVK +CSVP VL GSL++RIIP+FDYIQAVL +EEKTL AIKRF GIL +DLR  VGP
Sbjct: 121 PEIVKFVCSVPCVLTGSLNKRIIPSFDYIQAVLGSEEKTLTAIKRFPGILGWDLRTSVGP 180

Query: 181 NIEILKQSGVPDSNILTYLQRQPKMFLTSSIRFKEIVERVKEMGFDPQRLQFVVAVFAMR 240
           NIEILKQ GVPDSNI +YLQRQPKMFLTSSIRFKE VERV EMGF+PQRLQFVVAVFA+R
Sbjct: 181 NIEILKQIGVPDSNISSYLQRQPKMFLTSSIRFKEAVERVTEMGFNPQRLQFVVAVFALR 240

Query: 241 SMTKSTWDKKVEVYRKWGLSEEETHLAFRTHQWCMAVSEDKINGAMDFFVNKIGWEPSLV 300
           SMTKSTWDKK+EVYRKWGLSEEE   +FR + W M  SEDKIN  M FFVNKIG EP  V
Sbjct: 241 SMTKSTWDKKLEVYRKWGLSEEEIRFSFRKNPWGMRASEDKINDVMGFFVNKIGCEPFFV 300

Query: 301 ARRSILLSLSLKKRILPRGYVYQALRSKGLIKKGINF---FMYSDNLFIDKFIKPHKEQI 360
           ARR +L+SLSLKKRI+PRGYVYQAL SKGL+KK  NF   F  S+  FI+K+I PHKEQI
Sbjct: 301 ARRPLLISLSLKKRIIPRGYVYQALVSKGLVKKHANFTTLFNSSEKRFIEKYISPHKEQI 360

Query: 361 PGLLELYEEKLMD 371
           PGLLELYE+KLMD
Sbjct: 361 PGLLELYEQKLMD 362

[Close]

BLAST of PI0028421 vs. NCBI nr
Match: KAA0049484.1 (transcription termination factor MTEF1 [Cucumis melo var. makuwa] >TYK16164.1 transcription termination factor MTEF1 [Cucumis melo var. makuwa])

HSP 1 Score: 518.1 bits (1333), Expect = 6.4e-143
Identity = 272/370 (73.51%), Postives = 306/370 (82.70%), Query Frame = 0


Query: 1   MSNLFRTIILLRSPSSVSTHGFFVSPLKCLRYLSTSSEIISSPTSASLVSNVVQLKNNPK 60
           MS LFR I+LLRSPSSV +HGF   PLK LR+LSTSSE++SSP SASL SN V LKNN  
Sbjct: 1   MSYLFRRILLLRSPSSVFSHGFSECPLKSLRFLSTSSEVVSSPKSASLASNAVWLKNN-- 60

Query: 61  AVFIKIKNSREAVIAFLQNHGFSESQISDLAKRAPRVLSANPEKILLPKLLFLQSKGLSS 120
                    R+ VIA L NHGFS+SQISDLAKR P++ SANPE+ LLPKLLFLQSKGLSS
Sbjct: 61  ---------RKDVIALLANHGFSQSQISDLAKRLPQIFSANPEESLLPKLLFLQSKGLSS 120

Query: 121 PEIVKIICSVPSVLYGSLDRRIIPAFDYIQAVLRTEEKTLAAIKRFAGILTFDLRVLVGP 180
           P+IVK +C+ P VL GSL++RIIPAFDYIQAVL TEEK +AAIKRFAGILT DLR+ VGP
Sbjct: 121 PQIVKSVCAFPCVLTGSLNKRIIPAFDYIQAVLGTEEKAVAAIKRFAGILTQDLRISVGP 180

Query: 181 NIEILKQSGVPDSNILTYLQRQPKMFLTSSIRFKEIVERVKEMGFDPQRLQFVVAVFAMR 240
           NIEILKQ GVPDSNI TYLQ+QP+MF  SSIRFKEIVERV EMGF+P+RLQF+VAVFA+R
Sbjct: 181 NIEILKQIGVPDSNISTYLQQQPRMFFVSSIRFKEIVERVTEMGFNPERLQFLVAVFALR 240

Query: 241 SMTKSTWDKKVEVYRKWGLSEEETHLAFRTHQWCMAVSEDKINGAMDFFVNKIGWEPSLV 300
           SMTKSTWDKKVEVYRKWGLSEEE  LAFR + W M  SEDKIN  MDFFVNKIG E  LV
Sbjct: 241 SMTKSTWDKKVEVYRKWGLSEEEIRLAFRKNPWGMRASEDKINDVMDFFVNKIGCESFLV 300

Query: 301 ARRSILLSLSLKKRILPRGYVYQALRSKGLIKKGINFFMYSDNLFIDKFIKPHKEQIPGL 360
           ARR +L++LSLKKRILPRGY+YQ L SKGLIK   + F  S+N FI+KFI PHKEQIPGL
Sbjct: 301 ARRPVLIALSLKKRILPRGYIYQVLLSKGLIKNFSSLFHCSENRFIEKFINPHKEQIPGL 359

Query: 361 LELYEEKLMD 371
           L+LY++KLMD
Sbjct: 361 LDLYKQKLMD 359

[Close]

BLAST of PI0028421 vs. NCBI nr
Match: KAA0049469.1 (transcription termination factor MTEF1 [Cucumis melo var. makuwa] >TYK16148.1 transcription termination factor MTEF1 [Cucumis melo var. makuwa])

HSP 1 Score: 516.5 bits (1329), Expect = 1.9e-142
Identity = 277/376 (73.67%), Postives = 301/376 (80.05%), Query Frame = 0


Query: 1   MSNLFRTIILLRSPSSVSTHGFFVSPLKCLRYLSTSSEIISSPTSASLVSNVVQLKNNPK 60
           MSN+FR I+LLRSPS V   GF  SPLK LRYLSTSSEI+SSP SA L SN VQL     
Sbjct: 1   MSNVFRRILLLRSPSPVFPQGFSQSPLKSLRYLSTSSEIVSSPESAPLASNAVQL----- 60

Query: 61  AVFIKIKNSREAVIAFLQNHGFSESQISDLAKRAPRVLSANPEKILLPKLLFLQSKGLSS 120
                 KN R+AVIA L +HGFSESQIS L KR P++LSANPEKILLPKLLF QSKGLSS
Sbjct: 61  ------KNKRKAVIALLADHGFSESQISSLDKRYPQILSANPEKILLPKLLFFQSKGLSS 120

Query: 121 PEIVKIICSVPSVLYGSLDRRIIPAFDYIQAVLRTEEKTLAAIKRFAGILTFDLRVLVGP 180
           PEI K++CS P VL GSLD RIIPAFDYIQAVL +EEKTLA IK F  ILT DLR+ VGP
Sbjct: 121 PEIAKLVCSFPRVLAGSLDNRIIPAFDYIQAVLGSEEKTLAFIKYFGSILTHDLRISVGP 180

Query: 181 NIEILKQSGVPDSNILTYLQRQPKMFLTSSIRFKEIVERVKEMGFDPQRLQFVVAVFAMR 240
           NIEILKQ GVPDSNIL Y Q QP++F  +SIRFKE VERV EMGF+PQRLQF+VAVFA+R
Sbjct: 181 NIEILKQIGVPDSNILKYFQYQPRVFSRNSIRFKETVERVTEMGFNPQRLQFLVAVFALR 240

Query: 241 SMTKSTWDKKVEVYRKWGLSEEETHLAFRTHQWCMAVSEDKINGAMDFFVNKIGWEPSLV 300
           +MTKSTWDKKVEVYRKWGLSEEE  LAF+ H WCM VSEDKINGAMDFFVNKIG E S V
Sbjct: 241 AMTKSTWDKKVEVYRKWGLSEEEICLAFKRHPWCMMVSEDKINGAMDFFVNKIGCESSFV 300

Query: 301 ARRSILLSLSLKKRILPRGYVYQALRSKGLIKKGIN---FFMYSDNLFIDKFIKPHKEQI 360
           ARR  L+SLSLKKR+ PRGYVYQ L  KGLIKK  N   F   S+N FIDKFI PHKE+I
Sbjct: 301 ARRPALISLSLKKRLNPRGYVYQVLLEKGLIKKQANIPLFVSSSENRFIDKFINPHKEKI 360

Query: 361 PGLLELYEEKLMDSRR 374
           PGLLE YE+KLMDSRR
Sbjct: 361 PGLLESYEQKLMDSRR 365

[Close]

BLAST of PI0028421 vs. NCBI nr
Match: XP_008439382.1 (PREDICTED: uncharacterized protein LOC103484197 [Cucumis melo] >KAA0049472.1 transcription termination factor MTEF1 [Cucumis melo var. makuwa] >TYK16151.1 transcription termination factor MTEF1 [Cucumis melo var. makuwa])

HSP 1 Score: 515.4 bits (1326), Expect = 4.1e-142
Identity = 275/377 (72.94%), Postives = 310/377 (82.23%), Query Frame = 0


Query: 1   MSNLFRTIILLRSPSSVSTHGFFVSPLKCLRYLSTSSEIISSPTSASLVSNVVQLKNNPK 60
           MS LFR I+LLRSPSSV +HGF  SPLK LR+LSTSSEI+SSP SASL SN VQL+NN  
Sbjct: 1   MSYLFRRILLLRSPSSVFSHGFSESPLKSLRFLSTSSEIVSSPKSASLASNAVQLENN-- 60

Query: 61  AVFIKIKNSREAVIAFLQNHGFSESQISDLAKRAPRVLSANPEKILLPKLLFLQSKGLSS 120
                    R+AVI  L NHGFS+SQISD+ +R P++L+ANPEKILLPKLLF QSKGLSS
Sbjct: 61  ---------RKAVIELLANHGFSQSQISDIGRRRPQILAANPEKILLPKLLFFQSKGLSS 120

Query: 121 PEIVKIICSVPSVLYGSLDRRIIPAFDYIQAVLRTEEKTLAAIKRFAGILTFDLRVLVGP 180
           PEI K++C+ P VL GSL++RII  FDYIQAVL +EEKTLAAIK+FAGIL  DL++ VGP
Sbjct: 121 PEIAKLVCTFPYVLTGSLNKRIIYNFDYIQAVLGSEEKTLAAIKQFAGILARDLQISVGP 180

Query: 181 NIEILKQSGVPDSNILTYLQRQPKMFLTSSIRFKEIVERVKEMGFDPQRLQFVVAVFAMR 240
           NIEILKQ GVPDSNIL YLQ QP++F+ SSIRFKEIVERV EMGF+PQRLQF+VAVFA+R
Sbjct: 181 NIEILKQIGVPDSNILKYLQYQPRVFIISSIRFKEIVERVTEMGFNPQRLQFLVAVFALR 240

Query: 241 SMTKSTWDKKVEVYRKWGLSEEETHLAFRTHQWCMAVSEDKINGAMDFFVNKIGWEPSLV 300
           +MTKSTWDKKVEVYRKWGLSEEE  LAF+ H WCM VSEDKINGAMDFFVNKIG E S V
Sbjct: 241 AMTKSTWDKKVEVYRKWGLSEEEICLAFKRHPWCMMVSEDKINGAMDFFVNKIGCESSFV 300

Query: 301 ARRSILLSLSLKKRILPRGYVYQALRSKGLIKKGIN---FFMYSDNLFIDKFIKPHK-EQ 360
           ARR  L+SLSLKKR+ PRGYVYQ L  KGLIKK  N   F   S+  FI+KFI PHK EQ
Sbjct: 301 ARRPALISLSLKKRLNPRGYVYQVLLEKGLIKKQANIPLFVSSSEKRFIEKFINPHKEEQ 360

Query: 361 IPGLLELYEEKLMDSRR 374
           IPGLLELY++KLMDSRR
Sbjct: 361 IPGLLELYKQKLMDSRR 366

[Close]

BLAST of PI0028421 vs. TAIR 10
Match: AT5G07900.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 210.3 bits (534), Expect = 2.7e-54
Identity = 119/339 (35.10%), Postives = 202/339 (59.59%), Query Frame = 0


Query: 30  LRYLSTSSEIISSPTSASLVSNVVQLKNNPKAVFIKIKNSREAVIAFLQNHGFSESQISD 89
           L YL  S  +  SP SA++ S  + L +  +            V+  L++HGF+ +QIS 
Sbjct: 72  LNYLIDSCGL--SPDSATVASRKLLLDSPERP---------NTVLNLLRDHGFTTAQISS 131

Query: 90  LAKRAPRVLSANPEKILLPKLLFLQSKGLSSPEIVKIICSVPSVLYGSLDRRIIPAFDYI 149
           L K+ P +L AN E +LLPKL F  S G+S   + + + S P++L  SL  ++IP+++++
Sbjct: 132 LVKKRPVLLLANAESVLLPKLSFFLSIGVSKSLLARTLASDPTILTRSLVNQLIPSYNFL 191

Query: 150 QAVLRTEEKTLAAIKRFAGILTFDLRVLVGPNIEILKQSGVPDSNILTYLQRQPKMFLTS 209
           ++VL ++EK +AA++R   +   D    + PNI  + ++GVP+  I   L   P+  +  
Sbjct: 192 KSVLDSDEKIVAALRRTTWVFLEDHTKNLVPNINYMAETGVPEKCIKLLLTHFPEAVMQK 251

Query: 210 SIRFKEIVERVKEMGFDPQRLQFVVAVFAMRSM-TKSTWDKKVEVYRKWGLSEEETHLAF 269
           +  F+ I ++ +EMGF+PQ+  FV+A+ A+     KS WDK  EVY++WG SE++   AF
Sbjct: 252 NHEFQAIAKQAQEMGFNPQKSTFVLAIHALSGKGNKSIWDKCFEVYQRWGWSEDDIMCAF 311

Query: 270 RTHQWCMAVSEDKINGAMDFFVNKIGWEPSLVARRSILLSLSLKKRILPRGYVYQALRSK 329
           + H  CM +SE KIN  M++FVN++   P  +A+  ++L  SL+KRI+PR  V + L S 
Sbjct: 312 KKHPHCMMLSERKINRTMEYFVNEMNMAPRSIAQCPVVLFFSLEKRIIPRCSVTKVLVSN 371

Query: 330 GLIKKG---INFFMYSDNLFIDKFIKPHKEQIPGLLELY 365
           GL+K+     +  +  + +F++K +  ++E++P L+ LY
Sbjct: 372 GLVKEDWSLTSLLVPVEKVFLEKLVIKYEEELPELMNLY 399

[Close]

BLAST of PI0028421 vs. TAIR 10
Match: AT1G21150.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 197.2 bits (500), Expect = 2.3e-50
Identity = 110/313 (35.14%), Postives = 186/313 (59.42%), Query Frame = 0


Query: 56  KNNPKAVFIKIKNSREAVIAFLQNHGFSESQISDLAKRAPRVLSANPEKILLPKLLFLQS 115
           K+N + V +      ++V+A  ++HGF+  QI+ + K  PRVLS +PE ++ PKL+F  S
Sbjct: 74  KSNSRFVKLVSSKKPDSVLALFKDHGFTNDQITSVIKSFPRVLSLSPEDVISPKLMFFSS 133

Query: 116 KGLSSPEIVKIICSVPSVLYGSLDRRIIPAFDYIQAVLRTEEKTLAAIKRFAGILTFDLR 175
            G S+ +  K+I S P +L  SL +R+IP +D ++++L  EE  +  +KR  GI  F L+
Sbjct: 134 IGFSTSDTAKMISSSPKMLSYSLHKRLIPCYDSLKSILVEEESVVKCLKR--GIRCFSLK 193

Query: 176 V--LVGPNIEILKQSGVPDSNILTYLQRQPKMFLTSSIRFKEIVERVKEMGFDPQRLQFV 235
           +   V   + I ++ GVPD +I   +Q  P  F +   RF E++ RV   GFDP++  FV
Sbjct: 194 ITHCVSLRVSICRELGVPDKSIKWLVQASPFTFFSRERRFNEVLNRVCSYGFDPKKAGFV 253

Query: 236 VAVFAMRSMTKSTWDKKVEVYRKWGLSEEETHLAFRTHQWCMAVSEDKINGAMDFFVNKI 295
            A+ A    ++S  ++K ++++ +G S+E+   A      C+ VS++KI   +++ VN I
Sbjct: 254 HAMVAFDCTSESAMERKFKLFQCFGWSKEDFVAAIMRFPNCVTVSDEKIMYTLEYLVNNI 313

Query: 296 GWEPSLVARRSILLSLSLKKRILPRGYVYQALRSKGLIKK-GINFF---MYSDNLFIDKF 355
           G +   +  R ++LSLS++KRI PR  V   L SKGL+KK  IN+F       + F+DKF
Sbjct: 314 GLQARDIVARPVVLSLSMEKRIKPRNQVISLLLSKGLVKKEDINYFTILKLKSSEFMDKF 373

Query: 356 IKPHKEQIPGLLE 363
           +  +++++P L++
Sbjct: 374 VLKYQDEMPQLVQ 384

[Close]

BLAST of PI0028421 vs. TAIR 10
Match: AT5G64950.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 145.6 bits (366), Expect = 8.0e-35
Identity = 96/337 (28.49%), Postives = 179/337 (53.12%), Query Frame = 0


Query: 41  SSPTSASLVSNVVQLKNN----PKAVFIKIK-------NSREAVIAFLQNHGFSESQISD 100
           ++P S S  + V  L++N    P A+ I ++           +VI  L+++ FS++QI  
Sbjct: 31  ATPASISNPAFVEFLRDNGFQKPLAIAIAMRYPNLKSLEQPRSVIQMLKSYSFSDTQIQK 90

Query: 101 LAKRAPRVLSANPEKILLPKLLFLQSKGLSSPEIVKIICSVPSVLYGSLDRRIIPAFDYI 160
             +  PR++  N EKIL PKL F +  G +   + K +    SV+  SL +++IP  + +
Sbjct: 91  SIRVHPRMMFYNVEKILEPKLRFFKDIGFTGSGLGKFVSQNSSVVGVSLVKKLIPTVEIL 150

Query: 161 QAVLRTEEKTLAAIKRFAG--ILTFDLRVLVGPNIEILKQSGVPDSNILTYLQRQPKMFL 220
           ++++  + + L  I    G  +L+ D  + + PNI  L+  G+  S + + L+RQP++F 
Sbjct: 151 KSIVAPKHEDLPVILSRCGWLLLSRDPNLFLLPNISYLETCGIVGSQLASLLRRQPRIFN 210

Query: 221 TSSIRFKEIVERVKEMGFDPQRLQFVVAVFAMRSMTKSTWDKKVEVYRKWGLSEEETHLA 280
            S  + +  V R  ++GF       V AV ++ S+++ T+D+KV+++   G SE+E    
Sbjct: 211 LSEEKLRGYVSRALDLGFTLNSRMLVHAVISLSSLSEKTFDRKVKLFMANGFSEDEITDI 270

Query: 281 FRTHQWCMAVSEDKINGAMDFFVNKIGWEPSLVARRSILLSLSLKKRILPRGYVYQALRS 340
            R     +  SEDK+    +F++ ++G E   +A+R  +LS +L+KR++PR  V Q LR 
Sbjct: 271 IRRSPGLIRCSEDKLTLGFEFYLKRMGLEREALAKRPCVLSYNLEKRVIPRLKVLQILRE 330

Query: 341 KGLI-------KKGINFFMYSDNLFIDKFIKPHKEQI 358
           KGL+       K  +     ++  F++K++    ++I
Sbjct: 331 KGLLLKEEKKKKNMVGIVEMTEEAFLEKYVVRFGDEI 367

[Close]

BLAST of PI0028421 vs. TAIR 10
Match: AT1G61970.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 134.4 bits (337), Expect = 1.9e-31
Identity = 101/352 (28.69%), Postives = 173/352 (49.15%), Query Frame = 0


Query: 60  KAVFIKIKNSREAVIAFLQNHGFSESQISDLAKRAPRVLSANPEKILLPKLLFLQSKGLS 119
           + V  + KN+ ++V+  L +HGF+ SQIS + +  P++L A+ EK L PKL FLQS+G S
Sbjct: 74  RKVSFEDKNNPDSVLNLLTSHGFTGSQISTIIRDYPQLLIADAEKSLGPKLQFLQSRGAS 133

Query: 120 SPEIVKIICSVPSVLYGSLDRRIIPAFDYIQAVL----RTEEKTLAAIKRFAGILTFDLR 179
           S EI +I+ SVP +L     + I   +D+I+  L       EK   ++ +  G L   +R
Sbjct: 134 SSEITEIVSSVPEILGKKGHKTISVYYDFIKDTLLEKSSKNEKLCHSLPQ--GNLENKIR 193

Query: 180 VLVGPNIEILKQSGVPDSNILTYL--QRQPKMFLTSSIRFKEIVERVKEMGFDPQRLQFV 239
                N+ +L++ G+P   + + L    QP   +    +F+E +++V EMGFDP   +FV
Sbjct: 194 -----NVSVLRELGMPHKLLFSLLISDSQP---VCGKEKFEETLKKVVEMGFDPTTSKFV 253

Query: 240 VAVFAMRSMTKSTWDKKVEVY--------------RKW---------------------G 299
            A+  +  M + T ++KV +Y              +KW                     G
Sbjct: 254 EALQVIYKMNEKTIEEKVHLYKSLGFDVGDVWSSFKKWPISLRVSEKKMLDSIETFLGLG 313

Query: 300 LSEEETHLAFRTHQWCMAVSEDKINGAMDFFVNKIGWEPSLVARRSILLSLSLKKRILPR 359
            S +E     +    C+ +S + +    +F V K+ W    V     +   SL+KRI+PR
Sbjct: 314 FSRDEFAKMVKHFPPCIGLSTETVKKKTEFLVKKMNWPLKAVVSNPAVFGYSLEKRIVPR 373

Query: 360 GYVYQALRSKGLIKKGIN----FFMYSDNLFIDKFIKPH--KEQIPGLLELY 365
           G V +AL SKGL++  +       M +  +F+++++  H  K+ +  L+ +Y
Sbjct: 374 GNVIKALMSKGLMRNELPSISCVLMCTKQVFLNRYVANHVDKQLVTELMAIY 415

[Close]

BLAST of PI0028421 vs. TAIR 10
Match: AT1G61970.2 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 134.4 bits (337), Expect = 1.9e-31
Identity = 101/352 (28.69%), Postives = 173/352 (49.15%), Query Frame = 0


Query: 60  KAVFIKIKNSREAVIAFLQNHGFSESQISDLAKRAPRVLSANPEKILLPKLLFLQSKGLS 119
           + V  + KN+ ++V+  L +HGF+ SQIS + +  P++L A+ EK L PKL FLQS+G S
Sbjct: 74  RKVSFEDKNNPDSVLNLLTSHGFTGSQISTIIRDYPQLLIADAEKSLGPKLQFLQSRGAS 133

Query: 120 SPEIVKIICSVPSVLYGSLDRRIIPAFDYIQAVL----RTEEKTLAAIKRFAGILTFDLR 179
           S EI +I+ SVP +L     + I   +D+I+  L       EK   ++ +  G L   +R
Sbjct: 134 SSEITEIVSSVPEILGKKGHKTISVYYDFIKDTLLEKSSKNEKLCHSLPQ--GNLENKIR 193

Query: 180 VLVGPNIEILKQSGVPDSNILTYL--QRQPKMFLTSSIRFKEIVERVKEMGFDPQRLQFV 239
                N+ +L++ G+P   + + L    QP   +    +F+E +++V EMGFDP   +FV
Sbjct: 194 -----NVSVLRELGMPHKLLFSLLISDSQP---VCGKEKFEETLKKVVEMGFDPTTSKFV 253

Query: 240 VAVFAMRSMTKSTWDKKVEVY--------------RKW---------------------G 299
            A+  +  M + T ++KV +Y              +KW                     G
Sbjct: 254 EALQVIYKMNEKTIEEKVHLYKSLGFDVGDVWSSFKKWPISLRVSEKKMLDSIETFLGLG 313

Query: 300 LSEEETHLAFRTHQWCMAVSEDKINGAMDFFVNKIGWEPSLVARRSILLSLSLKKRILPR 359
            S +E     +    C+ +S + +    +F V K+ W    V     +   SL+KRI+PR
Sbjct: 314 FSRDEFAKMVKHFPPCIGLSTETVKKKTEFLVKKMNWPLKAVVSNPAVFGYSLEKRIVPR 373

Query: 360 GYVYQALRSKGLIKKGIN----FFMYSDNLFIDKFIKPH--KEQIPGLLELY 365
           G V +AL SKGL++  +       M +  +F+++++  H  K+ +  L+ +Y
Sbjct: 374 GNVIKALMSKGLMRNELPSISCVLMCTKQVFLNRYVANHVDKQLVTELMAIY 415

The following BLAST results are available for this feature:

BLAST of PI0028421 vs.


Match Name	E-value	Identity	Description

BLAST of PI0028421 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7U2M1	3.1e-143	73.51	Transcription termination factor MTEF1 OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]
A0A5A7U7J7	9.0e-143	73.67	Transcription termination factor MTEF1 OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]
A0A5A7U124	2.0e-142	72.94	Transcription termination factor MTEF1 OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]
A0A1S3AYM0	2.0e-142	72.94	uncharacterized protein LOC103484197 OS=Cucumis melo OX=3656 GN=LOC103484197 PE=...	[more]
A0A1S4DSR4	1.3e-141	72.07	uncharacterized protein LOC103483819 isoform X3 OS=Cucumis melo OX=3656 GN=LOC10...	[more]

BLAST of PI0028421 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_031738239.1	7.6e-144	75.07	transcription termination factor MTERF6, chloroplastic/mitochondrial [Cucumis sa...	[more]
XP_031738238.1	2.9e-143	74.26	uncharacterized protein LOC101209993 isoform X1 [Cucumis sativus] >KAE8650390.1 ...	[more]
KAA0049484.1	6.4e-143	73.51	transcription termination factor MTEF1 [Cucumis melo var. makuwa] >TYK16164.1 tr...	[more]
KAA0049469.1	1.9e-142	73.67	transcription termination factor MTEF1 [Cucumis melo var. makuwa] >TYK16148.1 tr...	[more]
XP_008439382.1	4.1e-142	72.94	PREDICTED: uncharacterized protein LOC103484197 [Cucumis melo] >KAA0049472.1 tra...	[more]

BLAST of PI0028421 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G07900.1	2.7e-54	35.10	Mitochondrial transcription termination factor family protein	[more]
AT1G21150.1	2.3e-50	35.14	Mitochondrial transcription termination factor family protein	[more]
AT5G64950.1	8.0e-35	28.49	Mitochondrial transcription termination factor family protein	[more]
AT1G61970.1	1.9e-31	28.69	Mitochondrial transcription termination factor family protein	[more]
AT1G61970.2	1.9e-31	28.69	Mitochondrial transcription termination factor family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 361..373
None	No IPR available	PANTHER	PTHR13068:SF160	TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN, PUTATIVE ISOFORM 1-RELATED	coord: 42..370
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	SMART	SM00733	mt_12	coord: 196..226 e-value: 450.0 score: 6.6 coord: 88..119 e-value: 0.016 score: 24.4 coord: 160..191 e-value: 550.0 score: 5.9 coord: 124..155 e-value: 44.0 score: 13.0 coord: 297..331 e-value: 28.0 score: 13.6 coord: 265..296 e-value: 770.0 score: 4.8
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	PFAM	PF02536	mTERF	coord: 75..234 e-value: 3.8E-20 score: 72.0 coord: 169..333 e-value: 9.0E-17 score: 61.0
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	PANTHER	PTHR13068	CGI-12 PROTEIN-RELATED	coord: 42..370
IPR038538	MTERF superfamily, mitochondrial/chloroplastic	GENE3D	1.25.70.10	Transcription termination factor 3, mitochondrial	coord: 155..358 e-value: 3.7E-37 score: 129.9

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0028421.1	PI0028421.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006353	DNA-templated transcription, termination
biological_process	GO:0006355	regulation of transcription, DNA-templated
molecular_function	GO:0003690	double-stranded DNA binding