PI0028332 (gene) Melon (PI 482460) v1

Overview
NamePI0028332
Typegene
OrganismCucumis metuliferus (Melon (PI 482460) v1)
Descriptionsignal recognition particle 14 kDa protein
Locationchr12: 6585024 .. 6589286 (+)
RNA-Seq ExpressionPI0028332
SyntenyPI0028332
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATTTCATGTACCGAACCAAATCGATATATGGTTGATGGGTTCGGTTGGTTTACTTAAACCGAGAACCAAATCAACGGTTCGGTTGAACCGAACAGATTTACACCCCTAGCCTGGCGACTAGGATGTCCAATTTTGTTAGCAAAAAAAAGTAAAATTGTTTTCCCTCTCGCCGTCGCTACTGCATTTTCTTCTCCGTTCAACGGACGTCGATCGGACCACTTCCTCGTACTTCTCAAGATCCGCTCCACACCCATCGCCATGGTAATTTCCTTTTCTCTTCGTCTTACTCATGTCTTGATTGAACTCTTATATATTCTCACGATACGTTCTCCTAATCTGCATTTTAATTATTCATCTTCATGTCAGAATTTAACCTAATCAACTGAGAGTTTGTGGGTGGGCGTTAGTTTTGATGATTCTTAGATAGCCAACTTGTTTTTACTTCCGTTTGGATATGTGTGTACATGTCTTTTTTAGGATTTTGCTTGTTGATTATTGCAATTATGGGTCTATCTTTTAGTGTTCTGCATATGAATCAAATCCAAGTTGCATGTTCTGCATTGCACGTTTTCTTCAGTTCCACCGCCACTACTCGGTTGGGTGACATCTACTTTTCAGTGGGTGGTTTTCTATTTAAGCGGATAAAATCGGGCCTAGCAGTTTTTCTGATCTTAATTATCATATAATGTCTGATTGCTTACGTTGTTGGGTCTTCATTGGCTGATAGTCTTGGTGTGAGTTCAATTCTGTTTAACGAAATTCAGTTCTCTCATTCAAATTTGGCAAAAGGAATTTCTCGAATTTGCCAAGACCAGATTCTTCAATGGGAGTTAGGTTTGTAACAAACTTCCTTTCAATGTATTTATTCCTTAAGAGTGGAAAATAATCAAATAATGTGTATCTTACGGCAGATGGTATTGGATGAACTAAGATAGAAGGTTCAAGTGCTATGTCACATCATTTGGACCCTTGAACATTGCACTCGCCCTTGGGTTTATTTGGCCAATTCGTATTCTTATGGGGCGTGGTACTTTGATAAGTCTTTTAGTAGCTAAACTATAAAAATATGTAAATTGTTTGGTATTCAAATCATATCACATAGTTTGCTATAAGTTCCAATTGGACTAGATGTACCACCCTATAGTTCTCTGGAAATTGCTTGGTTCACCTGTGCTTGTTTGGAGCTCTGCATATTTTGCATTACGCATACAAAGTTTTTTCTTCTGACACTTCCTCATGGACCCTAGTAATTTGATCTGCCAATGGTCCAAGAGAAAGACTTTAGGATCTCTCTCACTAGAGGCTTTACATGTAGACTTAACTTTCCTGTTGTTGAATTTGAATCTGTATTGAGCTAAAGTCCTGATGTTGGGGTGTTTTTTATTCCAGCATTGTAATGGCCTAATAGGTTCCCCAATGTTTTCTTTGAAACTTTGTTTGATAAAATTATCTTTCATTGAATTGAAAAGCCAGATCAACCCTTAGGGTTTGTTGATCATTAACCATACAAATTATTTCTTCAAACGAGAAGTGATCTCACTGTTTGTAGACGCTCACAGGCATACAGTTATTGTCTTTTTGATGCTACGTACTCCAACATTTTCTAGGCTCACTTAGCTTCTCTGCTCTCATTAGGCAAACCAAATTTAAAAGGTGTCCATTTCAGGGTTTCAAAACCTTGCTGCTGCATTTGACTTAAATGAAACTTGCCACTAGAGCTAACGTATTGCACATTTGGAAGGAAAGAAACAACAGAATTTTCAATGACAAGTATAGACCTTTTGTAAATTTTATGATCTTATTAAGTAAAAAACGTGACACACCTAAAGTGCCTTACAGATAGTATATAGATGCACACAGATTTTTATAATTAGTCCACCTGTACGGTATAGGGTTCTTTCTTTAAACCTTCCATTTCAAGCAAAGAGACTTCACAAAGGCAACTCTATGTCTCTAAACAAGTGGTCCCTGATAGTATTTCTTATGCCAATTCACCCATGTTATAGCTTGCTGTAGCATTCTTGTCCTTTTACTGGTTAAGGTATTATAACCTTGACAAAAAATCAGAGGTTTGGGTTCCCACTCCCACATATTCTTTACTCAAAAGAAGAAGAAAAAAAGAAAGAAAGGAAAACTAAACTATAGGGGAGAAAAGATAAACAACAATAAGTTGAAATAACAGAACCATGACAATGCGACCCCTGAAAAAGATCATAAACAGAAAATGCTCAAATGAAGAACAAATTATGTATTTTCACCCCATTTAATTCAAAATTAGGTAAATAATGGTGCTAAATTAATCACATTTCATAGGATTATTAGAGATTGTCTCTTGCCTCCTGGCTAGATATTTTATGATTGGTTTTTCTTTGATGAAAGTATCCGTTTCTTGTCAACTGCTGTAAAAGATGTCAGATTTCCAGTGGGTGAATTCAATCTTAGTTTTGGCCCAAGATAGACTATTGGAATTGTGTATAGTTGCCAAAAATTCACTACATTGTGGAATGTTATTGCAACGTCCTGATTCTACTTGGATGTAATGTGTACAGATGAGGATCGTGGTGCTTCCATGTCACTTTGGTGTAGGATTAGTGGAGGATTTCAAATTTATTGGAGATGTATGCATGTATACTATTTGAATCTGAAAAATAAAACTTTAGGATTTGCCGTATTTCGCTAAAAATGACTAGCAACATCATTAATTAAATGGAAAAGTGACAACTACATGTTATCTGCTAAAGAACAATAGAAAAAACAGTAAGCATGGTTGCTATATCAAGTTTAGTCATTGTCTTGATGATCTTTGGACCAAACTTGAATTGTCTTGACTTATGGAATTTATTTGTCCGAATAGCGAGATGTGCATAATAGCATTATTTGTTTCACTGATATTTGGACCATAATGAAAATCGCTTGATTTGTGGACTTTTTCCATCCAAATTCTGAGATGTATGCATCATTAGCATTCTATGTTTCATTCAACAAGGTAATACTTTGGCTTGATTATGACCTCATTAAGTTCTTATTCTTTTGATTTAGGTTTTACTGCAGCTAGACCCTTTTCTCAATGAACTTACCAGCATGTTTGAGCGTAGTACCGAGAAGGGTTCAGTGTGGGTTACTCTAAAACGATGTATGTGCATATCAGCGTTTTTCTAAAATTAATTTCATATATTTTTGTGGTAATCTTTAGGAGTCTGATTAGGTTCAAACTCTATTATCTCTTATTGATGTAGCATCACTGAAGTCCAAGGTGCAGATAAATAAAATGACCACTACTGGTCAACCTATTGAGTATAGGTGCCTCATCCGTGCTACAGATGGGAAGAAGACAATTTCAACTTCAGTAAGTACTTACTCATCTTTTAAGCTTGTTTCCCCCTCCCCTTTCTATCTCTTCTGAATTGAAAACTTTGCATAAGCATTCAAGTTTTTGTAGTAAATTCTAAATTTACTCCGGCTGAAGTAAGTCTCACTGAATTGAAGAATGCTGTGTTTAGACATCGTTTCTTTTTACTCTATTTATGTTCTACTTTAGTTTTGCATTACAACTCAATGCAACACAGGAGTGAGGGTGAAGTAATATATGGATTCTACCCCCTTTTCATCGTCACGCTTGAGCTTTGAATCATCTTTTACTCAGTTCATTGTTTTTAGCAAACAGAAGAACCAAACCCGTTTTGTAGGACTTCAATCAGCATATAGCCATTTCACATTCCTCAGATCTTATTATCTGTTTCTAACTTTCTTGAATCTGAAACATCTGTAACAACTTCTGCTAAACTGGCTAGGTTGGAGCAAAAGATCATCTGAGATTTCAAGCTTCGTATTCAACCATTCTTAAAGCCCACATGACTGCTCTTAAAAAGAGAGAGAGAAAGGACAAGAAGAAGGCAGCAGAGGCAGAGAAGGGTCTGAAGAAAAAACCGAGGAAAGTATAAAAGGAGGGCTCTTTTGCTTCTGTAGGTTACTCAAACCATTGTAACTCCCTTCTCTTCGTTACCCTTGTTTTTCATTCCTTTAACTTGATGAGTGTTATGCTTCCCCATATTTCTAGCAAAACGCAGAGGAAAGGGGAGGTAGGATTTTGGAGCTTCAGGAACTGAAAAATATTCGATCTTGTCATTTGTTTAGCCTTTTTTTTTACCTTAAAAGATTTAAATTATACATGTGATTTTACTGTGGAATTGTCTGGAAATTTTGCACACTCTCTTCCTTAAGCTATAAAACAACTTGACCGTCCTTTTAAGGTGCAATCATAAA

mRNA sequence

ATTTCATGTACCGAACCAAATCGATATATGGTTGATGGGTTCGGTTGGTTTACTTAAACCGAGAACCAAATCAACGGTTCGGTTGAACCGAACAGATTTACACCCCTAGCCTGGCGACTAGGATGTCCAATTTTGTTAGCAAAAAAAAGTAAAATTGTTTTCCCTCTCGCCGTCGCTACTGCATTTTCTTCTCCGTTCAACGGACGTCGATCGGACCACTTCCTCGTACTTCTCAAGATCCGCTCCACACCCATCGCCATGGTTTTACTGCAGCTAGACCCTTTTCTCAATGAACTTACCAGCATGTTTGAGCGTAGTACCGAGAAGGGTTCAGTGTGGGTTACTCTAAAACGATCATCACTGAAGTCCAAGGTGCAGATAAATAAAATGACCACTACTGGTCAACCTATTGAGTATAGGTGCCTCATCCGTGCTACAGATGGGAAGAAGACAATTTCAACTTCAGTTGGAGCAAAAGATCATCTGAGATTTCAAGCTTCGTATTCAACCATTCTTAAAGCCCACATGACTGCTCTTAAAAAGAGAGAGAGAAAGGACAAGAAGAAGGCAGCAGAGGCAGAGAAGGGTCTGAAGAAAAAACCGAGGAAAGTATAAAAGGAGGGCTCTTTTGCTTCTGTAGGTTACTCAAACCATTGTAACTCCCTTCTCTTCGTTACCCTTGTTTTTCATTCCTTTAACTTGATGAGTGTTATGCTTCCCCATATTTCTAGCAAAACGCAGAGGAAAGGGGAGGTAGGATTTTGGAGCTTCAGGAACTGAAAAATATTCGATCTTGTCATTTGTTTAGCCTTTTTTTTTACCTTAAAAGATTTAAATTATACATGTGATTTTACTGTGGAATTGTCTGGAAATTTTGCACACTCTCTTCCTTAAGCTATAAAACAACTTGACCGTCCTTTTAAGGTGCAATCATAAA

Coding sequence (CDS)

ATGGTTTTACTGCAGCTAGACCCTTTTCTCAATGAACTTACCAGCATGTTTGAGCGTAGTACCGAGAAGGGTTCAGTGTGGGTTACTCTAAAACGATCATCACTGAAGTCCAAGGTGCAGATAAATAAAATGACCACTACTGGTCAACCTATTGAGTATAGGTGCCTCATCCGTGCTACAGATGGGAAGAAGACAATTTCAACTTCAGTTGGAGCAAAAGATCATCTGAGATTTCAAGCTTCGTATTCAACCATTCTTAAAGCCCACATGACTGCTCTTAAAAAGAGAGAGAGAAAGGACAAGAAGAAGGCAGCAGAGGCAGAGAAGGGTCTGAAGAAAAAACCGAGGAAAGTATAA

Protein sequence

MVLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQINKMTTTGQPIEYRCLIRATDGKKTISTSVGAKDHLRFQASYSTILKAHMTALKKRERKDKKKAAEAEKGLKKKPRKV
Homology
[Close]
BLAST of PI0028332 vs. ExPASy Swiss-Prot
Match: O04421 (Signal recognition particle 14 kDa protein OS=Arabidopsis thaliana OX=3702 GN=SRP14 PE=2 SV=2)

HSP 1 Score: 179.1 bits (453), Expect = 2.9e-44
Identity = 93/109 (85.32%), Postives = 102/109 (93.58%), Query Frame = 0 

Query: 1   MVLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQINKMTTTGQPIEYRCLIRAT 60
           MVLLQLDPFLNELTSMFE+S EKGSVWVTLKRSSLKSKVQ  K+++ G+ IEYRCLIRAT
Sbjct: 1   MVLLQLDPFLNELTSMFEKSKEKGSVWVTLKRSSLKSKVQKRKLSSVGESIEYRCLIRAT 60

Query: 61  DGKKTISTSVGAKDHLRFQASYSTILKAHMTALKKRERKDKKKAAEAEK 110
           DGKKT+STSVGAKDH RFQASY+TILKAHMTALKKRERKD+KK+ EAEK
Sbjct: 61  DGKKTVSTSVGAKDHQRFQASYATILKAHMTALKKRERKDRKKSTEAEK 109

[Close]
BLAST of PI0028332 vs. ExPASy Swiss-Prot
Match: O04433 (Signal recognition particle 14 kDa protein OS=Oryza sativa subsp. japonica OX=39947 GN=SRP14 PE=2 SV=1)

HSP 1 Score: 157.9 bits (398), Expect = 7.0e-38
Identity = 81/117 (69.23%), Postives = 101/117 (86.32%), Query Frame = 0 

Query: 1   MVLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQINKMTTTGQPIEYRCLIRAT 60
           MV+LQ DPFL+ELTSM+ERSTEKGSVWVT+KRSS+K + ++ KM   G+ +EYRCL+RAT
Sbjct: 1   MVVLQPDPFLSELTSMYERSTEKGSVWVTMKRSSMKCQARLKKMAAKGEAVEYRCLVRAT 60

Query: 61  DGKKTISTSVGAKDHLRFQASYSTILKAHMTALKKRERKDKKKAAEAEKGLKKKPRK 118
           DGKK I T++ AK++L+FQASY+T+LKAHM ALKKRERKDKKKAAE EK  +K P+K
Sbjct: 61  DGKKNICTALSAKEYLKFQASYATVLKAHMHALKKRERKDKKKAAEVEKIPEKAPKK 117

[Close]
BLAST of PI0028332 vs. ExPASy Swiss-Prot
Match: P37108 (Signal recognition particle 14 kDa protein OS=Homo sapiens OX=9606 GN=SRP14 PE=1 SV=2)

HSP 1 Score: 89.7 bits (221), Expect = 2.3e-17
Identity = 50/108 (46.30%), Postives = 75/108 (69.44%), Query Frame = 0 

Query: 1   MVLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQINKMTTTG-QPIEYRCLIRA 60
           MVLL+ + FL ELT +F++    GSV++TLK+   ++K    K T  G +P + +CL+RA
Sbjct: 1   MVLLESEQFLTELTRLFQKCRTSGSVYITLKKYDGRTKPIPKKGTVEGFEPADNKCLLRA 60

Query: 61  TDGKKTISTSVGAKDHLRFQASYSTILKAHMTALKKRERKDKKKAAEA 108
           TDGKK IST V +K+  +FQ +YS +L+A+M  LKKR++K+K K  +A
Sbjct: 61  TDGKKKISTVVSSKEVNKFQMAYSNLLRANMDGLKKRDKKNKTKKTKA 108

[Close]
BLAST of PI0028332 vs. ExPASy Swiss-Prot
Match: Q4R5C7 (Signal recognition particle 14 kDa protein OS=Macaca fascicularis OX=9541 GN=SRP14 PE=2 SV=1)

HSP 1 Score: 89.7 bits (221), Expect = 2.3e-17
Identity = 50/108 (46.30%), Postives = 75/108 (69.44%), Query Frame = 0 

Query: 1   MVLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQINKMTTTG-QPIEYRCLIRA 60
           MVLL+ + FL ELT +F++    GSV++TLK+   ++K    K T  G +P + +CL+RA
Sbjct: 1   MVLLESEQFLTELTRLFQKCRTSGSVYITLKKYDGRTKPIPKKGTVEGFEPADNKCLLRA 60

Query: 61  TDGKKTISTSVGAKDHLRFQASYSTILKAHMTALKKRERKDKKKAAEA 108
           TDGKK IST V +K+  +FQ +YS +L+A+M  LKKR++K+K K  +A
Sbjct: 61  TDGKKKISTVVSSKEVNKFQMAYSNLLRANMDGLKKRDKKNKTKKTKA 108

[Close]
BLAST of PI0028332 vs. ExPASy Swiss-Prot
Match: Q5RBX7 (Signal recognition particle 14 kDa protein OS=Pongo abelii OX=9601 GN=SRP14 PE=2 SV=1)

HSP 1 Score: 89.7 bits (221), Expect = 2.3e-17
Identity = 50/108 (46.30%), Postives = 75/108 (69.44%), Query Frame = 0 

Query: 1   MVLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQINKMTTTG-QPIEYRCLIRA 60
           MVLL+ + FL ELT +F++    GSV++TLK+   ++K    K T  G +P + +CL+RA
Sbjct: 1   MVLLESEQFLTELTRLFQKCRTSGSVYITLKKYDGRTKPIPKKGTVEGFEPADNKCLLRA 60

Query: 61  TDGKKTISTSVGAKDHLRFQASYSTILKAHMTALKKRERKDKKKAAEA 108
           TDGKK IST V +K+  +FQ +YS +L+A+M  LKKR++K+K K  +A
Sbjct: 61  TDGKKKISTVVSSKEVNKFQMAYSNLLRANMDGLKKRDKKNKTKKTKA 108

[Close]
BLAST of PI0028332 vs. ExPASy TrEMBL
Match: A0A6J1KGP7 (signal recognition particle 14 kDa protein-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111495612 PE=3 SV=1)

HSP 1 Score: 214.9 bits (546), Expect = 1.8e-52
Identity = 116/118 (98.31%), Postives = 116/118 (98.31%), Query Frame = 0 

Query: 1   MVLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQINKMTTTGQPIEYRCLIRAT 60
           MVLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQ NKMTT GQPIEYRCLIRAT
Sbjct: 1   MVLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRAT 60

Query: 61  DGKKTISTSVGAKDHLRFQASYSTILKAHMTALKKRERKDKKKAAEAEKGLKKKPRKV 119
           DGKKTISTSVGAKDHLRFQASYSTILKAHMTALKKRERKDKKKAAEAEKGLKKKPRKV
Sbjct: 61  DGKKTISTSVGAKDHLRFQASYSTILKAHMTALKKRERKDKKKAAEAEKGLKKKPRKV 118

[Close]
BLAST of PI0028332 vs. ExPASy TrEMBL
Match: A0A0A0LYE0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G534730 PE=3 SV=1)

HSP 1 Score: 214.9 bits (546), Expect = 1.8e-52
Identity = 116/118 (98.31%), Postives = 116/118 (98.31%), Query Frame = 0 

Query: 1   MVLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQINKMTTTGQPIEYRCLIRAT 60
           MVLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQ NKMTT GQPIEYRCLIRAT
Sbjct: 1   MVLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRAT 60

Query: 61  DGKKTISTSVGAKDHLRFQASYSTILKAHMTALKKRERKDKKKAAEAEKGLKKKPRKV 119
           DGKKTISTSVGAKDHLRFQASYSTILKAHMTALKKRERKDKKKAAEAEKGLKKKPRKV
Sbjct: 61  DGKKTISTSVGAKDHLRFQASYSTILKAHMTALKKRERKDKKKAAEAEKGLKKKPRKV 118

[Close]
BLAST of PI0028332 vs. ExPASy TrEMBL
Match: A0A1S3BBI8 (signal recognition particle 14 kDa protein OS=Cucumis melo OX=3656 GN=LOC103487869 PE=3 SV=1)

HSP 1 Score: 214.9 bits (546), Expect = 1.8e-52
Identity = 116/118 (98.31%), Postives = 116/118 (98.31%), Query Frame = 0 

Query: 1   MVLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQINKMTTTGQPIEYRCLIRAT 60
           MVLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQ NKMTT GQPIEYRCLIRAT
Sbjct: 1   MVLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRAT 60

Query: 61  DGKKTISTSVGAKDHLRFQASYSTILKAHMTALKKRERKDKKKAAEAEKGLKKKPRKV 119
           DGKKTISTSVGAKDHLRFQASYSTILKAHMTALKKRERKDKKKAAEAEKGLKKKPRKV
Sbjct: 61  DGKKTISTSVGAKDHLRFQASYSTILKAHMTALKKRERKDKKKAAEAEKGLKKKPRKV 118

[Close]
BLAST of PI0028332 vs. ExPASy TrEMBL
Match: A0A5A7UG42 (Signal recognition particle 14 kDa protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold480G00850 PE=3 SV=1)

HSP 1 Score: 213.4 bits (542), Expect = 5.2e-52
Identity = 115/117 (98.29%), Postives = 115/117 (98.29%), Query Frame = 0 

Query: 2   VLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQINKMTTTGQPIEYRCLIRATD 61
           VLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQ NKMTT GQPIEYRCLIRATD
Sbjct: 7   VLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRATD 66

Query: 62  GKKTISTSVGAKDHLRFQASYSTILKAHMTALKKRERKDKKKAAEAEKGLKKKPRKV 119
           GKKTISTSVGAKDHLRFQASYSTILKAHMTALKKRERKDKKKAAEAEKGLKKKPRKV
Sbjct: 67  GKKTISTSVGAKDHLRFQASYSTILKAHMTALKKRERKDKKKAAEAEKGLKKKPRKV 123

[Close]
BLAST of PI0028332 vs. ExPASy TrEMBL
Match: A0A6J1EG32 (signal recognition particle 14 kDa protein-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111434001 PE=3 SV=1)

HSP 1 Score: 213.0 bits (541), Expect = 6.7e-52
Identity = 115/118 (97.46%), Postives = 116/118 (98.31%), Query Frame = 0 

Query: 1   MVLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQINKMTTTGQPIEYRCLIRAT 60
           MVLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQ NKMTT GQPIEYRCLIRAT
Sbjct: 1   MVLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRAT 60

Query: 61  DGKKTISTSVGAKDHLRFQASYSTILKAHMTALKKRERKDKKKAAEAEKGLKKKPRKV 119
           +GKKTISTSVGAKDHLRFQASYSTILKAHMTALKKRERKDKKKAAEAEKGLKKKPRKV
Sbjct: 61  NGKKTISTSVGAKDHLRFQASYSTILKAHMTALKKRERKDKKKAAEAEKGLKKKPRKV 118

[Close]
BLAST of PI0028332 vs. NCBI nr
Match: KGN66307.2 (hypothetical protein Csa_023187 [Cucumis sativus])

HSP 1 Score: 214.9 bits (546), Expect = 3.7e-52
Identity = 116/118 (98.31%), Postives = 116/118 (98.31%), Query Frame = 0 

Query: 1   MVLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQINKMTTTGQPIEYRCLIRAT 60
           MVLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQ NKMTT GQPIEYRCLIRAT
Sbjct: 84  MVLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRAT 143

Query: 61  DGKKTISTSVGAKDHLRFQASYSTILKAHMTALKKRERKDKKKAAEAEKGLKKKPRKV 119
           DGKKTISTSVGAKDHLRFQASYSTILKAHMTALKKRERKDKKKAAEAEKGLKKKPRKV
Sbjct: 144 DGKKTISTSVGAKDHLRFQASYSTILKAHMTALKKRERKDKKKAAEAEKGLKKKPRKV 201

[Close]
BLAST of PI0028332 vs. NCBI nr
Match: XP_004145229.1 (signal recognition particle 14 kDa protein [Cucumis sativus] >XP_008444601.1 PREDICTED: signal recognition particle 14 kDa protein [Cucumis melo] >XP_023001491.1 signal recognition particle 14 kDa protein-like isoform X1 [Cucurbita maxima] >XP_023001492.1 signal recognition particle 14 kDa protein-like isoform X2 [Cucurbita maxima])

HSP 1 Score: 214.9 bits (546), Expect = 3.7e-52
Identity = 116/118 (98.31%), Postives = 116/118 (98.31%), Query Frame = 0 

Query: 1   MVLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQINKMTTTGQPIEYRCLIRAT 60
           MVLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQ NKMTT GQPIEYRCLIRAT
Sbjct: 1   MVLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRAT 60

Query: 61  DGKKTISTSVGAKDHLRFQASYSTILKAHMTALKKRERKDKKKAAEAEKGLKKKPRKV 119
           DGKKTISTSVGAKDHLRFQASYSTILKAHMTALKKRERKDKKKAAEAEKGLKKKPRKV
Sbjct: 61  DGKKTISTSVGAKDHLRFQASYSTILKAHMTALKKRERKDKKKAAEAEKGLKKKPRKV 118

[Close]
BLAST of PI0028332 vs. NCBI nr
Match: KAG7019502.1 (Signal recognition particle 14 kDa protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 214.9 bits (546), Expect = 3.7e-52
Identity = 116/118 (98.31%), Postives = 116/118 (98.31%), Query Frame = 0 

Query: 1   MVLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQINKMTTTGQPIEYRCLIRAT 60
           MVLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQ NKMTT GQPIEYRCLIRAT
Sbjct: 19  MVLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRAT 78

Query: 61  DGKKTISTSVGAKDHLRFQASYSTILKAHMTALKKRERKDKKKAAEAEKGLKKKPRKV 119
           DGKKTISTSVGAKDHLRFQASYSTILKAHMTALKKRERKDKKKAAEAEKGLKKKPRKV
Sbjct: 79  DGKKTISTSVGAKDHLRFQASYSTILKAHMTALKKRERKDKKKAAEAEKGLKKKPRKV 136

[Close]
BLAST of PI0028332 vs. NCBI nr
Match: XP_023519243.1 (signal recognition particle 14 kDa protein-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 213.8 bits (543), Expect = 8.2e-52
Identity = 115/118 (97.46%), Postives = 116/118 (98.31%), Query Frame = 0 

Query: 1   MVLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQINKMTTTGQPIEYRCLIRAT 60
           MVLLQLDPFLNELTS+FERSTEKGSVWVTLKRSSLKSKVQ NKMTT GQPIEYRCLIRAT
Sbjct: 1   MVLLQLDPFLNELTSLFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRAT 60

Query: 61  DGKKTISTSVGAKDHLRFQASYSTILKAHMTALKKRERKDKKKAAEAEKGLKKKPRKV 119
           DGKKTISTSVGAKDHLRFQASYSTILKAHMTALKKRERKDKKKAAEAEKGLKKKPRKV
Sbjct: 61  DGKKTISTSVGAKDHLRFQASYSTILKAHMTALKKRERKDKKKAAEAEKGLKKKPRKV 118

[Close]
BLAST of PI0028332 vs. NCBI nr
Match: KAA0054008.1 (signal recognition particle 14 kDa protein [Cucumis melo var. makuwa] >TYK20693.1 signal recognition particle 14 kDa protein [Cucumis melo var. makuwa])

HSP 1 Score: 213.4 bits (542), Expect = 1.1e-51
Identity = 115/117 (98.29%), Postives = 115/117 (98.29%), Query Frame = 0 

Query: 2   VLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQINKMTTTGQPIEYRCLIRATD 61
           VLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQ NKMTT GQPIEYRCLIRATD
Sbjct: 7   VLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRATD 66

Query: 62  GKKTISTSVGAKDHLRFQASYSTILKAHMTALKKRERKDKKKAAEAEKGLKKKPRKV 119
           GKKTISTSVGAKDHLRFQASYSTILKAHMTALKKRERKDKKKAAEAEKGLKKKPRKV
Sbjct: 67  GKKTISTSVGAKDHLRFQASYSTILKAHMTALKKRERKDKKKAAEAEKGLKKKPRKV 123

[Close]
BLAST of PI0028332 vs. TAIR 10
Match: AT2G43640.1 (Signal recognition particle, SRP9/SRP14 subunit )

HSP 1 Score: 179.1 bits (453), Expect = 2.1e-45
Identity = 93/109 (85.32%), Postives = 102/109 (93.58%), Query Frame = 0 

Query: 1   MVLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQINKMTTTGQPIEYRCLIRAT 60
           MVLLQLDPFLNELTSMFE+S EKGSVWVTLKRSSLKSKVQ  K+++ G+ IEYRCLIRAT
Sbjct: 1   MVLLQLDPFLNELTSMFEKSKEKGSVWVTLKRSSLKSKVQKRKLSSVGESIEYRCLIRAT 60

Query: 61  DGKKTISTSVGAKDHLRFQASYSTILKAHMTALKKRERKDKKKAAEAEK 110
           DGKKT+STSVGAKDH RFQASY+TILKAHMTALKKRERKD+KK+ EAEK
Sbjct: 61  DGKKTVSTSVGAKDHQRFQASYATILKAHMTALKKRERKDRKKSTEAEK 109

[Close]
BLAST of PI0028332 vs. TAIR 10
Match: AT2G43640.2 (Signal recognition particle, SRP9/SRP14 subunit )

HSP 1 Score: 179.1 bits (453), Expect = 2.1e-45
Identity = 93/109 (85.32%), Postives = 102/109 (93.58%), Query Frame = 0 

Query: 1   MVLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQINKMTTTGQPIEYRCLIRAT 60
           MVLLQLDPFLNELTSMFE+S EKGSVWVTLKRSSLKSKVQ  K+++ G+ IEYRCLIRAT
Sbjct: 1   MVLLQLDPFLNELTSMFEKSKEKGSVWVTLKRSSLKSKVQKRKLSSVGESIEYRCLIRAT 60

Query: 61  DGKKTISTSVGAKDHLRFQASYSTILKAHMTALKKRERKDKKKAAEAEK 110
           DGKKT+STSVGAKDH RFQASY+TILKAHMTALKKRERKD+KK+ EAEK
Sbjct: 61  DGKKTVSTSVGAKDHQRFQASYATILKAHMTALKKRERKDRKKSTEAEK 109

[Close]
BLAST of PI0028332 vs. TAIR 10
Match: AT2G43640.3 (Signal recognition particle, SRP9/SRP14 subunit )

HSP 1 Score: 152.1 bits (383), Expect = 2.7e-37
Identity = 83/109 (76.15%), Postives = 93/109 (85.32%), Query Frame = 0 

Query: 1   MVLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQINKMTTTGQPIEYRCLIRAT 60
           MVLLQLDPFLNELTSMFE+S EK         +SLKSKVQ  K+++ G+ IEYRCLIRAT
Sbjct: 1   MVLLQLDPFLNELTSMFEKSKEK---------ASLKSKVQKRKLSSVGESIEYRCLIRAT 60

Query: 61  DGKKTISTSVGAKDHLRFQASYSTILKAHMTALKKRERKDKKKAAEAEK 110
           DGKKT+STSVGAKDH RFQASY+TILKAHMTALKKRERKD+KK+ EAEK
Sbjct: 61  DGKKTVSTSVGAKDHQRFQASYATILKAHMTALKKRERKDRKKSTEAEK 100

The following BLAST results are available for this feature:
BLAST of PI0028332 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
O044212.9e-4485.32Signal recognition particle 14 kDa protein OS=Arabidopsis thaliana OX=3702 GN=SR... [more]
O044337.0e-3869.23Signal recognition particle 14 kDa protein OS=Oryza sativa subsp. japonica OX=39... [more]
P371082.3e-1746.30Signal recognition particle 14 kDa protein OS=Homo sapiens OX=9606 GN=SRP14 PE=1... [more]
Q4R5C72.3e-1746.30Signal recognition particle 14 kDa protein OS=Macaca fascicularis OX=9541 GN=SRP... [more]
Q5RBX72.3e-1746.30Signal recognition particle 14 kDa protein OS=Pongo abelii OX=9601 GN=SRP14 PE=2... [more]
BLAST of PI0028332 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1KGP71.8e-5298.31signal recognition particle 14 kDa protein-like isoform X1 OS=Cucurbita maxima O... [more]
A0A0A0LYE01.8e-5298.31Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G534730 PE=3 SV=1[more]
A0A1S3BBI81.8e-5298.31signal recognition particle 14 kDa protein OS=Cucumis melo OX=3656 GN=LOC1034878... [more]
A0A5A7UG425.2e-5298.29Signal recognition particle 14 kDa protein OS=Cucumis melo var. makuwa OX=119469... [more]
A0A6J1EG326.7e-5297.46signal recognition particle 14 kDa protein-like isoform X1 OS=Cucurbita moschata... [more]
BLAST of PI0028332 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN66307.23.7e-5298.31hypothetical protein Csa_023187 [Cucumis sativus][more]
XP_004145229.13.7e-5298.31signal recognition particle 14 kDa protein [Cucumis sativus] >XP_008444601.1 PRE... [more]
KAG7019502.13.7e-5298.31Signal recognition particle 14 kDa protein, partial [Cucurbita argyrosperma subs... [more]
XP_023519243.18.2e-5297.46signal recognition particle 14 kDa protein-like [Cucurbita pepo subsp. pepo][more]
KAA0054008.11.1e-5198.29signal recognition particle 14 kDa protein [Cucumis melo var. makuwa] >TYK20693.... [more]
BLAST of PI0028332 vs. TAIR 10
Match NameE-valueIdentityDescription
AT2G43640.12.1e-4585.32Signal recognition particle, SRP9/SRP14 subunit [more]
AT2G43640.22.1e-4585.32Signal recognition particle, SRP9/SRP14 subunit [more]
AT2G43640.32.7e-3776.15Signal recognition particle, SRP9/SRP14 subunit [more]
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009018Signal recognition particle, SRP9/SRP14 subunitGENE3D3.30.720.10Signal recognition particle alu RNA binding heterodimer, srp9/1coord: 1..118
e-value: 1.5E-39
score: 137.6
IPR009018Signal recognition particle, SRP9/SRP14 subunitSUPERFAMILY54762Signal recognition particle alu RNA binding heterodimer, SRP9/14coord: 1..96
IPR003210Signal recognition particle, SRP14 subunitPFAMPF02290SRP14coord: 4..93
e-value: 2.6E-22
score: 79.2
IPR003210Signal recognition particle, SRP14 subunitPANTHERPTHR12013SIGNAL RECOGNITION PARTICLE 14 KD PROTEINcoord: 2..109
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 93..118
NoneNo IPR availablePANTHERPTHR12013:SF3SUBFAMILY NOT NAMEDcoord: 2..109

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
PI0028332.1PI0028332.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0007186 G protein-coupled receptor signaling pathway
biological_process GO:0006614 SRP-dependent cotranslational protein targeting to membrane
cellular_component GO:0005786 signal recognition particle, endoplasmic reticulum targeting
cellular_component GO:0048500 signal recognition particle
molecular_function GO:0008312 7S RNA binding
molecular_function GO:0030942 endoplasmic reticulum signal peptide binding