Homology
BLAST of PI0028329 vs. ExPASy Swiss-Prot
Match:
P14381 (Transposon TX1 uncharacterized 149 kDa protein OS=Xenopus laevis OX=8355 PE=4 SV=1)
HSP 1 Score: 81.3 bits (199), Expect = 4.6e-14
Identity = 55/222 (24.77%), Postives = 105/222 (47.30%), Query Frame = 0
Query: 414 KSRIRWLKLGDQNSAFLHRSVRSRICRNNLLSIVDFEGGRVTSYDGLVQVAINFFRNSLG 473
+SR++ L D+ S F + + + R + + +G + + + A +F++N
Sbjct: 359 RSRMQLLCDMDRGSRFFYALEKKKGNRKQITCLFAEDGTPLEDPEAIRDRARSFYQNLFS 418
Query: 474 SQMIGYCELSPLLEEVVKFRWSEECSHALQALIRHDEIRKVLFTMDSSKASGPDGFSAGF 533
I L + + SE L+ I DE+ + L M +K+ G DG + F
Sbjct: 419 PDPISPDACEELWDGLPVV--SERRKERLETPITLDELSQALRLMPHNKSPGLDGLTIEF 478
Query: 534 FKDAWNVVGEDFSDVVLHFFDTCYLPTEVNATAITLISKRCGAERMEDFRPISCCNVVYK 593
F+ W+ +G DF V+ F LP ++L+ K+ ++++RP+S + YK
Sbjct: 479 FQFFWDTLGPDFHRVLTEAFKKGELPLSCRRAVLSLLPKKGDLRLIKNWRPVSLLSTDYK 538
Query: 594 CISKILAGRLRVWLPFFISGNQHAFVAGRSITNNILLCQELV 636
++K ++ RL+ L I +Q V GR+I +N+ L ++L+
Sbjct: 539 IVAKAISLRLKSVLAEVIHPDQSYTVPGRTIFDNVFLIRDLL 578
BLAST of PI0028329 vs. ExPASy Swiss-Prot
Match:
P11369 (LINE-1 retrotransposable element ORF2 protein OS=Mus musculus OX=10090 GN=Pol PE=1 SV=2)
HSP 1 Score: 67.4 bits (163), Expect = 6.8e-10
Identity = 55/204 (26.96%), Postives = 97/204 (47.55%), Query Frame = 0
Query: 424 DQNSAFLHRSVRSRICRNNLLSIVDFEGGRVTSYDGLVQVAI-NFFRNSLGSQMIGYCEL 483
D+ A L + R +I N + + E G +T+ +Q I +F++ +++ E+
Sbjct: 381 DKPLARLTKGHRDKILINKIRN----EKGDITTDPEEIQNTIRSFYKRLYSTKLENLDEM 440
Query: 484 SPLLEEVVKFRWSEECSHALQALIRHDEIRKVLFTMDSSKASGPDGFSAGFFKDAWNVVG 543
L+ + +++ L + I EI V+ ++ + K+ GPDGFSA F++
Sbjct: 441 DKFLDRYQVPKLNQDQVDHLNSPISPKEIEAVINSLPTKKSPGPDGFSAEFYQ----TFK 500
Query: 544 EDFSDVVLHFFDTC----YLPTEVNATAITLISK-RCGAERMEDFRPISCCNVVYKCISK 603
ED ++ F LP ITLI K + ++E+FRPIS N+ K ++K
Sbjct: 501 EDLIPILHKLFHKIEVEGTLPNSFYEATITLIPKPQKDPTKIENFRPISLMNIDAKILNK 560
Query: 604 ILAGRLRVWLPFFISGNQHAFVAG 622
ILA R++ + I +Q F+ G
Sbjct: 561 ILANRIQEHIKAIIHPDQVGFIPG 576
BLAST of PI0028329 vs. ExPASy Swiss-Prot
Match:
O00370 (LINE-1 retrotransposable element ORF2 protein OS=Homo sapiens OX=9606 PE=1 SV=1)
HSP 1 Score: 62.8 bits (151), Expect = 1.7e-08
Identity = 48/197 (24.37%), Postives = 92/197 (46.70%), Query Frame = 0
Query: 430 LHRSVRSRICRNNLLSIVDFEGGRVTSYDGLVQVAINFFRNSLGSQMIGYCELSPLLEEV 489
L R ++ + +N + +I + +G T + ++++ +++ E+ L+
Sbjct: 377 LARLIKKKREKNQIDTIKNDKGDITTDPTEIQTTIREYYKHLYANKLENLEEMDTFLDTY 436
Query: 490 VKFRWSEECSHALQALIRHDEIRKVLFTMDSSKASGPDGFSAGFFKDAWNVVGEDFSDVV 549
R ++E +L I EI ++ ++ + K+ GPDGF+A F++ E+ +
Sbjct: 437 TLPRLNQEEVESLNRPITGSEIVAIINSLPTKKSPGPDGFTAEFYQR----YKEELVPFL 496
Query: 550 LHFFDTC----YLPTEVNATAITLISK-RCGAERMEDFRPISCCNVVYKCISKILAGRLR 609
L F + LP +I LI K + E+FRPIS N+ K ++KILA R++
Sbjct: 497 LKLFQSIEKEGILPNSFYEASIILIPKPGRDTTKKENFRPISLMNIDAKILNKILANRIQ 556
Query: 610 VWLPFFISGNQHAFVAG 622
+ I +Q F+ G
Sbjct: 557 QHIKKLIHHDQVGFIPG 569
BLAST of PI0028329 vs. ExPASy TrEMBL
Match:
A0A5A7V5J2 (Non-LTR retroelement reverse transcriptase-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold387G00210 PE=4 SV=1)
HSP 1 Score: 736.5 bits (1900), Expect = 9.6e-209
Identity = 407/820 (49.63%), Postives = 486/820 (59.27%), Query Frame = 0
Query: 35 MPTITILENGLICFQFRHPKSIEWIISHGPWHLGGKPMLLHRWVLGIVPETFVFNFVPVW 94
MPTITILEN LICFQFR P S+EWI+S GPWHLGGKPMLL +W LGIVPE+FVFN VPVW
Sbjct: 1 MPTITILENDLICFQFRRPNSVEWILSRGPWHLGGKPMLLRKWTLGIVPESFVFNSVPVW 60
Query: 95 IKLGRIPMELWTESGIAVIASAICKPLSLDLATKERCRLSFARVCVEVEGGADLPSEVTV 154
I+LGRIPMELWTE+ +A++AS + KP++LDLATKE RLS+ARVCV++EG ++ +E+TV
Sbjct: 61 IRLGRIPMELWTEAWLAIVASVVGKPITLDLATKEHSRLSYARVCVKLEGEFNMRAEITV 120
Query: 155 TLRGVEFIVPVTYEWEPRMCNSCHSFSHSVG----------------------------- 214
LRGV+F V V YEW+P+ CN C + HS G
Sbjct: 121 NLRGVDFNVSVNYEWKPQKCNLCCAIGHSGGKCPRSVESKIIQEEVVSKIIPGKGEGVDS 180
Query: 215 --------------------------------------YFTTVTRKKRELVLVRDKGKGM 274
FT VTRKK ELV VRD+GK +
Sbjct: 181 EPCAKVVLESFKQLEEGEIRSSPNRHGSHVEKEVGKRDEFTLVTRKKSELVSVRDRGKSI 240
Query: 275 SMQPLQNSFGSLSELSEGENWALELQVNRPPPLQIVGSDGGMPIMSSDG----------- 334
+ + NSFGSL E+ + + WAL + PPPLQ+ G + + S
Sbjct: 241 -VVAMPNSFGSLLEVGDVDKWALTVIEGSPPPLQVDEGTGVLSDLKSKAVSDFLGSSSVG 300
Query: 335 ------------------------------------------------------------ 394
Sbjct: 301 FCCLLETRVRESNFDYVSRRFGNSWDYSCSYSNSGVGRIWVVWKKNRFSFSTCVVDEQFV 360
Query: 395 -GPL-----GICVD-------------------LVDITSRWSILGVVMGDFNAIRVHYEA 454
G L G+CV+ LV+ITS WS VVMGDFNAIRVH+EA
Sbjct: 361 TGTLTDLLSGVCVEVFCVYASNSNIERRLLWRRLVEITSCWSSPEVVMGDFNAIRVHFEA 420
Query: 455 CGGNLIPDDMEEFDLAIREADLVELSVQDNWFTWT------------------------- 514
GG+ I +ME+FDLA R+ADLVE SVQ NWFTWT
Sbjct: 421 FGGSPIQGEMEDFDLATRDADLVEPSVQGNWFTWTSKVHGSGMLRRLDRILVNDEWLSAW 480
Query: 515 ---------------------IWVRRLGVSPLVSPMRSLHDLKSVLRRHFGRHIRGLSKE 574
+W R GVSPLVS MR+L +LK LRR FGRHI+ L++E
Sbjct: 481 PTLLVLQSLVEDPSFIEVVARMWGRHEGVSPLVSLMRNLQNLKPTLRRRFGRHIQSLNEE 540
Query: 575 VRSAKEAMDRAQREVERDPGFVERSRLARLATEAFWLAIRLEEASLRHKSRIRWLKLGDQ 634
V AKE MDRAQREVE +P SR LATEAFW A+RLEEASLR KSRIRWL+LGDQ
Sbjct: 541 VHIAKENMDRAQREVEHNPMSDVLSRQVGLATEAFWTAVRLEEASLRQKSRIRWLELGDQ 600
Query: 635 NSAFLHRSVRSRICRNNLLSIVDFEGGRVTSYDGLVQVAINFFRNSLGSQMIGYCELSPL 646
N+AF HR VRSR+ RN+LLS+VD +G RV+S+DG+VQ+A+N+FRNSLGSQ IGY EL P+
Sbjct: 601 NTAFFHRPVRSRMSRNSLLSLVDADGSRVSSHDGVVQLAVNYFRNSLGSQEIGYRELFPV 660
BLAST of PI0028329 vs. ExPASy TrEMBL
Match:
A0A5D3DXQ8 (Reverse transcriptase domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold600G001370 PE=4 SV=1)
HSP 1 Score: 558.5 bits (1438), Expect = 3.6e-155
Identity = 331/696 (47.56%), Postives = 400/696 (57.47%), Query Frame = 0
Query: 72 MLLHRWVLGIVPETFVFNFVPVWIKLGRIPMELWTESGIAVIASAICKPLSLDLATKERC 131
MLL +W IVPE+FVF VPVWIKLGRIPMELWTE+G+ V+AS + KPL+LDLATKERC
Sbjct: 1 MLLRKWTPSIVPESFVFTSVPVWIKLGRIPMELWTEAGLTVVASDVGKPLTLDLATKERC 60
Query: 132 RLSFARVCVEVEGGADLPSEVTVTLRGVEFIVPVTYEWEPRMCNSCHSFSHSVGYF-TTV 191
RLS+ARVC+E++ + +P+E+TV+L+GV+FIV V YEW+PR CN C +F HS G +V
Sbjct: 61 RLSYARVCIELDVNSHMPAEITVSLKGVDFIVSVNYEWKPRKCNLCCAFEHSSGKCPRSV 120
Query: 192 TRKKRELVLVRDKGKGMSMQPLQNSFG-----SLSELSEGENWALELQVNR--------- 251
+ V+V G + + G S +L EGE + NR
Sbjct: 121 ENSVLQEVVVSKIILGKRDELDSETCGEVVLESFKQLEEGE---IRSSPNRPSSQVEKEG 180
Query: 252 -PPPLQI---------------------------------------VGSDGGMPIMSSDG 311
PPPLQ+ G+ S+
Sbjct: 181 LPPPLQMDKDVLLSGFFIFWGHPLWGSVASWRLEFATSSFETVSRRFGNSWDYSCSYSNS 240
Query: 312 GP--------------------------------LGICVD-------------------L 371
G G+ V+ L
Sbjct: 241 GVGQIWVMWKKNSFSFSTRVVDEQFVTGTLTDLLSGVRVEVFYVYASNSNIERRLLWCRL 300
Query: 372 VDITSRWSILGVVMGDFNAIRVHYEACGGNLIPDDMEEFDLAIREADLVELSVQDNWFTW 431
V+IT WS G+VMGDFNAIRVH EA GG+ I +ME+FDLAIR+ADLVE SVQ NWFTW
Sbjct: 301 VEITYGWSSPGMVMGDFNAIRVHSEAFGGSPIQGEMEDFDLAIRDADLVEPSVQGNWFTW 360
Query: 432 T---------------------------IWVRRLGVSPLVSPMRSLHDLKSVLRRHFGRH 491
T +W R GVSPLVS +R+L LKS +RRHFGRH
Sbjct: 361 TSKNRRVVSFRFFNHWMEDPSFIEVVSRMWGRNEGVSPLVSLIRNLQHLKSTIRRHFGRH 420
Query: 492 IRGLSKEVRSAKEAMDRAQREVERDPGFVERSRLARLATEAFWLAIRLEEASLRHKSRIR 551
I+ LS+EVR+AKEAMDRAQREV+R+P SR A LATEAFW +RLEEASL K RIR
Sbjct: 421 IQSLSEEVRNAKEAMDRAQREVKRNPMSDVLSRQAGLATEAFWTTVRLEEASLHQKFRIR 480
Query: 552 WLKLGDQNSAFLHRSVRSRICRNNLLSIVDFEGGRVTSYDGLVQVAINFFRNSLGSQMIG 611
WL+LG+QN+AF HRSV SR SQ I
Sbjct: 481 WLELGNQNTAFFHRSVSSR------------------------------------SQEIC 540
Query: 612 YCELSPLLEEVVKFRWSEECSHALQALIRHDEIRKVLFTMDSSKASGPDGFSAGFFKDAW 635
Y ELSP+++++V+FRWSEEC ALQ I +E+R+VLF+MDS KASG DGFS FFK W
Sbjct: 541 YRELSPVIDDIVQFRWSEECCQALQVPISREEVRRVLFSMDSRKASGHDGFSVSFFKGDW 600
BLAST of PI0028329 vs. ExPASy TrEMBL
Match:
A0A5A7U4M4 (Reverse transcriptase domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold61G001420 PE=4 SV=1)
HSP 1 Score: 558.1 bits (1437), Expect = 4.7e-155
Identity = 331/696 (47.56%), Postives = 400/696 (57.47%), Query Frame = 0
Query: 72 MLLHRWVLGIVPETFVFNFVPVWIKLGRIPMELWTESGIAVIASAICKPLSLDLATKERC 131
MLL +W IVPE+FVF VPVWIKLGRIPMELWTE+G+ V+AS + KPL+LDLATKERC
Sbjct: 1 MLLRKWTPSIVPESFVFTSVPVWIKLGRIPMELWTEAGLTVVASDVGKPLTLDLATKERC 60
Query: 132 RLSFARVCVEVEGGADLPSEVTVTLRGVEFIVPVTYEWEPRMCNSCHSFSHSVGYF-TTV 191
RLS+ARVC+E++ + +P+E+TV+L+GV+FIV V YEW+PR CN C +F HS G +V
Sbjct: 61 RLSYARVCIELDVNSHMPAEITVSLKGVDFIVSVNYEWKPRKCNLCCAFEHSSGKCPRSV 120
Query: 192 TRKKRELVLVRDKGKGMSMQPLQNSFG-----SLSELSEGENWALELQVNR--------- 251
+ V+V G + + G S +L EGE + NR
Sbjct: 121 ENSVLQEVVVSKIILGKRDELDSETCGEVVLESFKQLEEGE---IRSSPNRPSSQVEKEG 180
Query: 252 -PPPLQI---------------------------------------VGSDGGMPIMSSDG 311
PPPLQ+ G+ S+
Sbjct: 181 LPPPLQMDKDVLLSGFFIFWGHPLWGSVASWRLEFATSSFETVSRRFGNSWDYSCSYSNS 240
Query: 312 GP--------------------------------LGICVD-------------------L 371
G G+ V+ L
Sbjct: 241 GVGQIWVMWKKNSFSFSTRVVDEQFVTGTLTDLLSGVRVEVFYVYASNSNIERRLLWCRL 300
Query: 372 VDITSRWSILGVVMGDFNAIRVHYEACGGNLIPDDMEEFDLAIREADLVELSVQDNWFTW 431
V+IT WS G+VMGDFNAIRVH EA GG+ I +ME+FDLAIR+ADLVE SVQ NWFTW
Sbjct: 301 VEITYGWSSPGMVMGDFNAIRVHSEAFGGSPIQGEMEDFDLAIRDADLVEPSVQGNWFTW 360
Query: 432 T---------------------------IWVRRLGVSPLVSPMRSLHDLKSVLRRHFGRH 491
T +W R GVSPLVS +R+L LKS +RRHFGRH
Sbjct: 361 TSKNRRVVSFRFFNHWMEDPSFIEVVSRMWGRNEGVSPLVSLIRNLQHLKSTIRRHFGRH 420
Query: 492 IRGLSKEVRSAKEAMDRAQREVERDPGFVERSRLARLATEAFWLAIRLEEASLRHKSRIR 551
I+ LS+EVR+AKEAMDRAQREV+R+P SR A LATEAFW +RLEEASL K RIR
Sbjct: 421 IQSLSEEVRNAKEAMDRAQREVKRNPMSDVLSRQAGLATEAFWTKVRLEEASLHQKFRIR 480
Query: 552 WLKLGDQNSAFLHRSVRSRICRNNLLSIVDFEGGRVTSYDGLVQVAINFFRNSLGSQMIG 611
WL+LG+QN+AF HRSV SR SQ I
Sbjct: 481 WLELGNQNTAFFHRSVSSR------------------------------------SQEIC 540
Query: 612 YCELSPLLEEVVKFRWSEECSHALQALIRHDEIRKVLFTMDSSKASGPDGFSAGFFKDAW 635
Y ELSP+++++V+FRWSEEC ALQ I +E+R+VLF+MDS KASG DGFS FFK W
Sbjct: 541 YRELSPVIDDIVQFRWSEECCQALQVPISREEVRRVLFSMDSRKASGHDGFSVSFFKGDW 600
BLAST of PI0028329 vs. ExPASy TrEMBL
Match:
A0A5A7V275 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold184G00430 PE=4 SV=1)
HSP 1 Score: 545.0 bits (1403), Expect = 4.1e-151
Identity = 308/658 (46.81%), Postives = 383/658 (58.21%), Query Frame = 0
Query: 72 MLLHRWVLGIVPETFVFNFVPVWIKLGRIPMELWTESGIAVIASAICKPLSLDLATKERC 131
MLL +W GIVPE+FVFN V VWI+LG+IPMELWTE+G+AV+ASA+ KP+SLDL TKER
Sbjct: 1 MLLRKWTPGIVPESFVFNSVSVWIRLGKIPMELWTEAGLAVVASAVGKPISLDLTTKERR 60
Query: 132 RLSFARVCVEVEGGADLPSEVTVTLRGVEFIVPVTYEWEPRMCNSCHSFSHSVGYFTTVT 191
RLS+ARVCVE+EGG+++P+++TV+L GV+F V + YEW+PR CN C +F HS +
Sbjct: 61 RLSYARVCVELEGGSNMPAQITVSLGGVDFNVSINYEWKPRKCNLCCAFGHSGSKCSRSV 120
Query: 192 RKK---RELV--LVRDKGKGMSMQP----LQNSFGSLSEL----------SEGENWALEL 251
K E+V ++ K G+ +P + SF L E+ S+ + WAL +
Sbjct: 121 ESKTIQEEVVHKIIHGKRDGLDSKPCGEVVLESFKQLEEVEIRSSPNRHNSDADKWALSI 180
Query: 252 QVNRPPPLQIVGSDGGMPIMSSDGGP---------------------------------- 311
PPPLQ+ + +SS GP
Sbjct: 181 IEGSPPPLQVDEGTDVLSGVSSSIGPKGLHTLNNSHDYYSNSGVGQIWVMWKKNRFSFST 240
Query: 312 ----------------LGICVD-------------------LVDITSRWSILGVVMGDFN 371
G+CV+ LV+ TS WS GVVMGDFN
Sbjct: 241 RVVDEQFVTGTLTDLLFGVCVEVFCVYASNSNIERRLLWHRLVETTSAWSSPGVVMGDFN 300
Query: 372 AIRVHYEACGGNLIPDDMEEFDLAIREADLVELSVQDNWFTWT----------------- 431
AIRVH EA GG+ I +ME+FDLAIR+ADLVE SVQ NWFTWT
Sbjct: 301 AIRVHSEAFGGSPIQGEMEDFDLAIRDADLVEPSVQGNWFTWTSKVHGSGMLRRLDRVLV 360
Query: 432 -----------------------------------------------------------I 491
+
Sbjct: 361 NDAWLSAWPTMLVNVLPWGISDHSPILFYPSFQLNSKVVSFRFFNHWVEDPSFIEVVARM 420
Query: 492 WVRRLGVSPLVSPMRSLHDLKSVLRRHFGRHIRGLSKEVRSAKEAMDRAQREVERDPGFV 551
W R GVSPLVS MR+LH LK LRR FGRHI+ LS+EV AKEAMDRAQR+VER+
Sbjct: 421 WSRHEGVSPLVSLMRNLHHLKPTLRRQFGRHIQSLSEEVHIAKEAMDRAQRDVERNSMSD 480
Query: 552 ERSRLARLATEAFWLAIRLEEASLRHKSRIRWLKLGDQNSAFLHRSVRSRICRNNLLSIV 566
SR A LATE FW A+RLEEASLR KSRIRWLKLGDQN+ F HRSVRSR+ RN+LLS+V
Sbjct: 481 VLSRQASLATETFWTAVRLEEASLRQKSRIRWLKLGDQNTTFFHRSVRSRMSRNSLLSLV 540
BLAST of PI0028329 vs. ExPASy TrEMBL
Match:
A0A5A7TZS0 (Reverse transcriptase domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold19358G00020 PE=4 SV=1)
HSP 1 Score: 517.3 bits (1331), Expect = 9.2e-143
Identity = 269/457 (58.86%), Postives = 312/457 (68.27%), Query Frame = 0
Query: 265 LVDITSRWSILGVVMGDFNAIRVHYEACGGNLIPDDMEEFDLAIREADLVELSVQDNWFT 324
L +ITS WS LGVVMGDFNAIRVH EA GG+ I +MEEFDLAIR+ADLVE SVQ NWFT
Sbjct: 87 LFEITSAWSSLGVVMGDFNAIRVHSEAFGGSPIQGEMEEFDLAIRDADLVEPSVQGNWFT 146
Query: 325 WT---------------------------------------------------------- 384
WT
Sbjct: 147 WTSKVQGSGMLRRLDRVLVNDEWLSAWPTMRINVLPWGISDHSPILFYPSFQVNSRVVSF 206
Query: 385 ------------------IWVRRLGVSPLVSPMRSLHDLKSVLRRHFGRHIRGLSKEVRS 444
+W R GVS LVS MR+LH LK +LRR FGRHI+ LS+EV
Sbjct: 207 RFFNHWVEEPSFIEVVARMWSRHEGVSLLVSLMRNLHHLKPILRRQFGRHIKSLSEEVHI 266
Query: 445 AKEAMDRAQREVERDPGFVERSRLARLATEAFWLAIRLEEASLRHKSRIRWLKLGDQNSA 504
AKEAMD AQREVER+P SR A LATE FW A+RLEEASLR KS++RWL LGDQN+A
Sbjct: 267 AKEAMDIAQREVERNPLSDVLSRQASLATETFWTAVRLEEASLRQKSKVRWLNLGDQNTA 326
Query: 505 FLHRSVRSRICRNNLLSIVDFEGGRVTSYDGLVQVAINFFRNSLGSQMIGYCELSPLLEE 564
F HRSVRSR+ RN+LLS+VD +G RV+S+DG+ Q+A+N+F NSLGSQ IGY ELSP++++
Sbjct: 327 FFHRSVRSRLSRNSLLSLVDSDGSRVSSHDGVAQMAVNYFSNSLGSQEIGYRELSPIIDD 386
Query: 565 VVKFRWSEECSHALQALIRHDEIRKVLFTMDSSKASGPDGFSAGFFKDAWNVVGEDFSDV 624
+V+F+WSEEC ALQ I +E+R+VLF+MDS KA GPDGFS GF+K AW+VVGEDF +
Sbjct: 387 IVQFQWSEECCQALQLPISREEVRRVLFSMDSGKAPGPDGFSVGFYKGAWSVVGEDFCNA 446
Query: 625 VLHFFDTCYLPTEVNATAITLISKRCGAERMEDFRPISCCNVVYKCISKILAGRLRVWLP 646
VLHFF+TCYLP VNATAITLI K GAER+EDFRPISCCNV+YKCISKILA RLR+WLP
Sbjct: 447 VLHFFETCYLPIGVNATAITLIPKHIGAERLEDFRPISCCNVLYKCISKILADRLRLWLP 506
BLAST of PI0028329 vs. NCBI nr
Match:
KAA0062888.1 (non-LTR retroelement reverse transcriptase-like protein [Cucumis melo var. makuwa] >TYK22520.1 non-LTR retroelement reverse transcriptase-like protein [Cucumis melo var. makuwa])
HSP 1 Score: 736.5 bits (1900), Expect = 2.0e-208
Identity = 407/820 (49.63%), Postives = 486/820 (59.27%), Query Frame = 0
Query: 35 MPTITILENGLICFQFRHPKSIEWIISHGPWHLGGKPMLLHRWVLGIVPETFVFNFVPVW 94
MPTITILEN LICFQFR P S+EWI+S GPWHLGGKPMLL +W LGIVPE+FVFN VPVW
Sbjct: 1 MPTITILENDLICFQFRRPNSVEWILSRGPWHLGGKPMLLRKWTLGIVPESFVFNSVPVW 60
Query: 95 IKLGRIPMELWTESGIAVIASAICKPLSLDLATKERCRLSFARVCVEVEGGADLPSEVTV 154
I+LGRIPMELWTE+ +A++AS + KP++LDLATKE RLS+ARVCV++EG ++ +E+TV
Sbjct: 61 IRLGRIPMELWTEAWLAIVASVVGKPITLDLATKEHSRLSYARVCVKLEGEFNMRAEITV 120
Query: 155 TLRGVEFIVPVTYEWEPRMCNSCHSFSHSVG----------------------------- 214
LRGV+F V V YEW+P+ CN C + HS G
Sbjct: 121 NLRGVDFNVSVNYEWKPQKCNLCCAIGHSGGKCPRSVESKIIQEEVVSKIIPGKGEGVDS 180
Query: 215 --------------------------------------YFTTVTRKKRELVLVRDKGKGM 274
FT VTRKK ELV VRD+GK +
Sbjct: 181 EPCAKVVLESFKQLEEGEIRSSPNRHGSHVEKEVGKRDEFTLVTRKKSELVSVRDRGKSI 240
Query: 275 SMQPLQNSFGSLSELSEGENWALELQVNRPPPLQIVGSDGGMPIMSSDG----------- 334
+ + NSFGSL E+ + + WAL + PPPLQ+ G + + S
Sbjct: 241 -VVAMPNSFGSLLEVGDVDKWALTVIEGSPPPLQVDEGTGVLSDLKSKAVSDFLGSSSVG 300
Query: 335 ------------------------------------------------------------ 394
Sbjct: 301 FCCLLETRVRESNFDYVSRRFGNSWDYSCSYSNSGVGRIWVVWKKNRFSFSTCVVDEQFV 360
Query: 395 -GPL-----GICVD-------------------LVDITSRWSILGVVMGDFNAIRVHYEA 454
G L G+CV+ LV+ITS WS VVMGDFNAIRVH+EA
Sbjct: 361 TGTLTDLLSGVCVEVFCVYASNSNIERRLLWRRLVEITSCWSSPEVVMGDFNAIRVHFEA 420
Query: 455 CGGNLIPDDMEEFDLAIREADLVELSVQDNWFTWT------------------------- 514
GG+ I +ME+FDLA R+ADLVE SVQ NWFTWT
Sbjct: 421 FGGSPIQGEMEDFDLATRDADLVEPSVQGNWFTWTSKVHGSGMLRRLDRILVNDEWLSAW 480
Query: 515 ---------------------IWVRRLGVSPLVSPMRSLHDLKSVLRRHFGRHIRGLSKE 574
+W R GVSPLVS MR+L +LK LRR FGRHI+ L++E
Sbjct: 481 PTLLVLQSLVEDPSFIEVVARMWGRHEGVSPLVSLMRNLQNLKPTLRRRFGRHIQSLNEE 540
Query: 575 VRSAKEAMDRAQREVERDPGFVERSRLARLATEAFWLAIRLEEASLRHKSRIRWLKLGDQ 634
V AKE MDRAQREVE +P SR LATEAFW A+RLEEASLR KSRIRWL+LGDQ
Sbjct: 541 VHIAKENMDRAQREVEHNPMSDVLSRQVGLATEAFWTAVRLEEASLRQKSRIRWLELGDQ 600
Query: 635 NSAFLHRSVRSRICRNNLLSIVDFEGGRVTSYDGLVQVAINFFRNSLGSQMIGYCELSPL 646
N+AF HR VRSR+ RN+LLS+VD +G RV+S+DG+VQ+A+N+FRNSLGSQ IGY EL P+
Sbjct: 601 NTAFFHRPVRSRMSRNSLLSLVDADGSRVSSHDGVVQLAVNYFRNSLGSQEIGYRELFPV 660
BLAST of PI0028329 vs. NCBI nr
Match:
XP_031745634.1 (uncharacterized protein LOC116406053 [Cucumis sativus])
HSP 1 Score: 564.3 bits (1453), Expect = 1.4e-156
Identity = 321/745 (43.09%), Postives = 412/745 (55.30%), Query Frame = 0
Query: 41 LENGLICFQFRHPKSIEWIISHGPWHLGGKPMLLHRWVLGIVPETFVFNFVPVWIKLGRI 100
+ENGLICFQF+H KSIEWI+S GPWHLGGKPMLL +W GIVPE+FVF+ V V IKLGRI
Sbjct: 1 MENGLICFQFKHLKSIEWILSRGPWHLGGKPMLLRKWTPGIVPESFVFDSVHVLIKLGRI 60
Query: 101 PMELWTESGIAVIASAICKPLSLDLATKERCRLSFARVCVEVEGGADLPSEVTVTLRGVE 160
P+ELWT++G+AV+ASAI KPLS+DLATKER RLS+AR+CVE+ + +P+EVTV LRG E
Sbjct: 61 PLELWTDAGLAVVASAIGKPLSVDLATKERRRLSYARICVELNVDSIMPAEVTVNLRGEE 120
Query: 161 FIVPVTYEWEPRMCNSCHSFSHSVG----------------------------------- 220
FIV VTYEW+P+ CN C SF HS
Sbjct: 121 FIVTVTYEWKPKKCNLCRSFGHSQNTCPKKRGNEDSKKEAASKEVPVKEVVPTKEVVPIC 180
Query: 221 ---------------------------------YFTTVTRKKRELVLVRDKGKGMSMQPL 280
FT V RK R ++ + D+GK + +
Sbjct: 181 GEYEDVVLESFQHMEEGEIITHKLPEKVEVNWEEFTPVDRKNRGMISIWDRGKRAEVS-I 240
Query: 281 QNSFGSLSELSEGENWALELQVNRPPPLQIVGSDGGMPIMSSDGG--PLG---------- 340
NSF +L E+ +G+ W L + PPPL++ D M ++S+ G P+G
Sbjct: 241 TNSFNNLMEVDKGDKWPLSIVDASPPPLRV--DDSSMVLLSTAGDVIPMGEAAPIRPHDL 300
Query: 341 --------ICV--------------DLVDITSRWSILGVVMGDFNAIRVHYEACGGNLIP 400
+CV + +I++ W G+V+GDFN IR+ EA GG
Sbjct: 301 ISGEKVEVLCVYAYNSNIERRVLWRQMAEISAGWRGPGMVLGDFNTIRLQSEAFGGAPNV 360
Query: 401 DDMEEFDLAIREADLVELSVQDNWFTWT-------------------------------- 460
L+ +VQ NWFTWT
Sbjct: 361 GIWRSLTWLFERRTLLN-AVQGNWFTWTSKIHGSGLMKRLDRILVNDEGLSTWPNMRVNV 420
Query: 461 ------------IWVRRLGVSPLVSPMRSLHDLKSVLRRHFGRHIRGLSKEVRSAKEAMD 520
W + VSP+V+ +R+L +LKS+LRRHFGRHIR +S++VR A + MD
Sbjct: 421 LPWASFMDVVSSAWTKDTRVSPIVNIVRNLRNLKSILRRHFGRHIRTISEDVRLANDTMD 480
Query: 521 RAQREVERDPGFVERSRLARLATEAFWLAIRLEEASLRHKSRIRWLKLGDQNSAFLHRSV 580
RA+RE+E + E S A LAT +
Sbjct: 481 RAEREMETNSLSEEASNHASLATSS----------------------------------- 540
Query: 581 RSRICRNNLLSIVDFEGGRVTSYDGLVQVAINFFRNSLGSQMIGYCELSPLLEEVVKFRW 640
N L S++D +G R+T++D + QV +N+F++SLGSQ I Y ELS +EE+V+FRW
Sbjct: 541 ------NALRSVIDPDGNRLTNHDQVTQVVVNYFKDSLGSQNISYGELSTSIEEIVQFRW 600
BLAST of PI0028329 vs. NCBI nr
Match:
TYK28312.1 (uncharacterized protein E5676_scaffold600G001370 [Cucumis melo var. makuwa])
HSP 1 Score: 558.5 bits (1438), Expect = 7.4e-155
Identity = 331/696 (47.56%), Postives = 400/696 (57.47%), Query Frame = 0
Query: 72 MLLHRWVLGIVPETFVFNFVPVWIKLGRIPMELWTESGIAVIASAICKPLSLDLATKERC 131
MLL +W IVPE+FVF VPVWIKLGRIPMELWTE+G+ V+AS + KPL+LDLATKERC
Sbjct: 1 MLLRKWTPSIVPESFVFTSVPVWIKLGRIPMELWTEAGLTVVASDVGKPLTLDLATKERC 60
Query: 132 RLSFARVCVEVEGGADLPSEVTVTLRGVEFIVPVTYEWEPRMCNSCHSFSHSVGYF-TTV 191
RLS+ARVC+E++ + +P+E+TV+L+GV+FIV V YEW+PR CN C +F HS G +V
Sbjct: 61 RLSYARVCIELDVNSHMPAEITVSLKGVDFIVSVNYEWKPRKCNLCCAFEHSSGKCPRSV 120
Query: 192 TRKKRELVLVRDKGKGMSMQPLQNSFG-----SLSELSEGENWALELQVNR--------- 251
+ V+V G + + G S +L EGE + NR
Sbjct: 121 ENSVLQEVVVSKIILGKRDELDSETCGEVVLESFKQLEEGE---IRSSPNRPSSQVEKEG 180
Query: 252 -PPPLQI---------------------------------------VGSDGGMPIMSSDG 311
PPPLQ+ G+ S+
Sbjct: 181 LPPPLQMDKDVLLSGFFIFWGHPLWGSVASWRLEFATSSFETVSRRFGNSWDYSCSYSNS 240
Query: 312 GP--------------------------------LGICVD-------------------L 371
G G+ V+ L
Sbjct: 241 GVGQIWVMWKKNSFSFSTRVVDEQFVTGTLTDLLSGVRVEVFYVYASNSNIERRLLWCRL 300
Query: 372 VDITSRWSILGVVMGDFNAIRVHYEACGGNLIPDDMEEFDLAIREADLVELSVQDNWFTW 431
V+IT WS G+VMGDFNAIRVH EA GG+ I +ME+FDLAIR+ADLVE SVQ NWFTW
Sbjct: 301 VEITYGWSSPGMVMGDFNAIRVHSEAFGGSPIQGEMEDFDLAIRDADLVEPSVQGNWFTW 360
Query: 432 T---------------------------IWVRRLGVSPLVSPMRSLHDLKSVLRRHFGRH 491
T +W R GVSPLVS +R+L LKS +RRHFGRH
Sbjct: 361 TSKNRRVVSFRFFNHWMEDPSFIEVVSRMWGRNEGVSPLVSLIRNLQHLKSTIRRHFGRH 420
Query: 492 IRGLSKEVRSAKEAMDRAQREVERDPGFVERSRLARLATEAFWLAIRLEEASLRHKSRIR 551
I+ LS+EVR+AKEAMDRAQREV+R+P SR A LATEAFW +RLEEASL K RIR
Sbjct: 421 IQSLSEEVRNAKEAMDRAQREVKRNPMSDVLSRQAGLATEAFWTTVRLEEASLHQKFRIR 480
Query: 552 WLKLGDQNSAFLHRSVRSRICRNNLLSIVDFEGGRVTSYDGLVQVAINFFRNSLGSQMIG 611
WL+LG+QN+AF HRSV SR SQ I
Sbjct: 481 WLELGNQNTAFFHRSVSSR------------------------------------SQEIC 540
Query: 612 YCELSPLLEEVVKFRWSEECSHALQALIRHDEIRKVLFTMDSSKASGPDGFSAGFFKDAW 635
Y ELSP+++++V+FRWSEEC ALQ I +E+R+VLF+MDS KASG DGFS FFK W
Sbjct: 541 YRELSPVIDDIVQFRWSEECCQALQVPISREEVRRVLFSMDSRKASGHDGFSVSFFKGDW 600
BLAST of PI0028329 vs. NCBI nr
Match:
KAA0048521.1 (uncharacterized protein E6C27_scaffold61G001420 [Cucumis melo var. makuwa])
HSP 1 Score: 558.1 bits (1437), Expect = 9.7e-155
Identity = 331/696 (47.56%), Postives = 400/696 (57.47%), Query Frame = 0
Query: 72 MLLHRWVLGIVPETFVFNFVPVWIKLGRIPMELWTESGIAVIASAICKPLSLDLATKERC 131
MLL +W IVPE+FVF VPVWIKLGRIPMELWTE+G+ V+AS + KPL+LDLATKERC
Sbjct: 1 MLLRKWTPSIVPESFVFTSVPVWIKLGRIPMELWTEAGLTVVASDVGKPLTLDLATKERC 60
Query: 132 RLSFARVCVEVEGGADLPSEVTVTLRGVEFIVPVTYEWEPRMCNSCHSFSHSVGYF-TTV 191
RLS+ARVC+E++ + +P+E+TV+L+GV+FIV V YEW+PR CN C +F HS G +V
Sbjct: 61 RLSYARVCIELDVNSHMPAEITVSLKGVDFIVSVNYEWKPRKCNLCCAFEHSSGKCPRSV 120
Query: 192 TRKKRELVLVRDKGKGMSMQPLQNSFG-----SLSELSEGENWALELQVNR--------- 251
+ V+V G + + G S +L EGE + NR
Sbjct: 121 ENSVLQEVVVSKIILGKRDELDSETCGEVVLESFKQLEEGE---IRSSPNRPSSQVEKEG 180
Query: 252 -PPPLQI---------------------------------------VGSDGGMPIMSSDG 311
PPPLQ+ G+ S+
Sbjct: 181 LPPPLQMDKDVLLSGFFIFWGHPLWGSVASWRLEFATSSFETVSRRFGNSWDYSCSYSNS 240
Query: 312 GP--------------------------------LGICVD-------------------L 371
G G+ V+ L
Sbjct: 241 GVGQIWVMWKKNSFSFSTRVVDEQFVTGTLTDLLSGVRVEVFYVYASNSNIERRLLWCRL 300
Query: 372 VDITSRWSILGVVMGDFNAIRVHYEACGGNLIPDDMEEFDLAIREADLVELSVQDNWFTW 431
V+IT WS G+VMGDFNAIRVH EA GG+ I +ME+FDLAIR+ADLVE SVQ NWFTW
Sbjct: 301 VEITYGWSSPGMVMGDFNAIRVHSEAFGGSPIQGEMEDFDLAIRDADLVEPSVQGNWFTW 360
Query: 432 T---------------------------IWVRRLGVSPLVSPMRSLHDLKSVLRRHFGRH 491
T +W R GVSPLVS +R+L LKS +RRHFGRH
Sbjct: 361 TSKNRRVVSFRFFNHWMEDPSFIEVVSRMWGRNEGVSPLVSLIRNLQHLKSTIRRHFGRH 420
Query: 492 IRGLSKEVRSAKEAMDRAQREVERDPGFVERSRLARLATEAFWLAIRLEEASLRHKSRIR 551
I+ LS+EVR+AKEAMDRAQREV+R+P SR A LATEAFW +RLEEASL K RIR
Sbjct: 421 IQSLSEEVRNAKEAMDRAQREVKRNPMSDVLSRQAGLATEAFWTKVRLEEASLHQKFRIR 480
Query: 552 WLKLGDQNSAFLHRSVRSRICRNNLLSIVDFEGGRVTSYDGLVQVAINFFRNSLGSQMIG 611
WL+LG+QN+AF HRSV SR SQ I
Sbjct: 481 WLELGNQNTAFFHRSVSSR------------------------------------SQEIC 540
Query: 612 YCELSPLLEEVVKFRWSEECSHALQALIRHDEIRKVLFTMDSSKASGPDGFSAGFFKDAW 635
Y ELSP+++++V+FRWSEEC ALQ I +E+R+VLF+MDS KASG DGFS FFK W
Sbjct: 541 YRELSPVIDDIVQFRWSEECCQALQVPISREEVRRVLFSMDSRKASGHDGFSVSFFKGDW 600
BLAST of PI0028329 vs. NCBI nr
Match:
KAA0059841.1 (reverse transcriptase [Cucumis melo var. makuwa] >TYK24796.1 reverse transcriptase [Cucumis melo var. makuwa])
HSP 1 Score: 545.0 bits (1403), Expect = 8.5e-151
Identity = 308/658 (46.81%), Postives = 383/658 (58.21%), Query Frame = 0
Query: 72 MLLHRWVLGIVPETFVFNFVPVWIKLGRIPMELWTESGIAVIASAICKPLSLDLATKERC 131
MLL +W GIVPE+FVFN V VWI+LG+IPMELWTE+G+AV+ASA+ KP+SLDL TKER
Sbjct: 1 MLLRKWTPGIVPESFVFNSVSVWIRLGKIPMELWTEAGLAVVASAVGKPISLDLTTKERR 60
Query: 132 RLSFARVCVEVEGGADLPSEVTVTLRGVEFIVPVTYEWEPRMCNSCHSFSHSVGYFTTVT 191
RLS+ARVCVE+EGG+++P+++TV+L GV+F V + YEW+PR CN C +F HS +
Sbjct: 61 RLSYARVCVELEGGSNMPAQITVSLGGVDFNVSINYEWKPRKCNLCCAFGHSGSKCSRSV 120
Query: 192 RKK---RELV--LVRDKGKGMSMQP----LQNSFGSLSEL----------SEGENWALEL 251
K E+V ++ K G+ +P + SF L E+ S+ + WAL +
Sbjct: 121 ESKTIQEEVVHKIIHGKRDGLDSKPCGEVVLESFKQLEEVEIRSSPNRHNSDADKWALSI 180
Query: 252 QVNRPPPLQIVGSDGGMPIMSSDGGP---------------------------------- 311
PPPLQ+ + +SS GP
Sbjct: 181 IEGSPPPLQVDEGTDVLSGVSSSIGPKGLHTLNNSHDYYSNSGVGQIWVMWKKNRFSFST 240
Query: 312 ----------------LGICVD-------------------LVDITSRWSILGVVMGDFN 371
G+CV+ LV+ TS WS GVVMGDFN
Sbjct: 241 RVVDEQFVTGTLTDLLFGVCVEVFCVYASNSNIERRLLWHRLVETTSAWSSPGVVMGDFN 300
Query: 372 AIRVHYEACGGNLIPDDMEEFDLAIREADLVELSVQDNWFTWT----------------- 431
AIRVH EA GG+ I +ME+FDLAIR+ADLVE SVQ NWFTWT
Sbjct: 301 AIRVHSEAFGGSPIQGEMEDFDLAIRDADLVEPSVQGNWFTWTSKVHGSGMLRRLDRVLV 360
Query: 432 -----------------------------------------------------------I 491
+
Sbjct: 361 NDAWLSAWPTMLVNVLPWGISDHSPILFYPSFQLNSKVVSFRFFNHWVEDPSFIEVVARM 420
Query: 492 WVRRLGVSPLVSPMRSLHDLKSVLRRHFGRHIRGLSKEVRSAKEAMDRAQREVERDPGFV 551
W R GVSPLVS MR+LH LK LRR FGRHI+ LS+EV AKEAMDRAQR+VER+
Sbjct: 421 WSRHEGVSPLVSLMRNLHHLKPTLRRQFGRHIQSLSEEVHIAKEAMDRAQRDVERNSMSD 480
Query: 552 ERSRLARLATEAFWLAIRLEEASLRHKSRIRWLKLGDQNSAFLHRSVRSRICRNNLLSIV 566
SR A LATE FW A+RLEEASLR KSRIRWLKLGDQN+ F HRSVRSR+ RN+LLS+V
Sbjct: 481 VLSRQASLATETFWTAVRLEEASLRQKSRIRWLKLGDQNTTFFHRSVRSRMSRNSLLSLV 540
BLAST of PI0028329 vs. TAIR 10
Match:
AT1G43760.1 (DNAse I-like superfamily protein )
HSP 1 Score: 117.5 bits (293), Expect = 4.1e-26
Identity = 78/252 (30.95%), Postives = 131/252 (51.98%), Query Frame = 0
Query: 348 KSVLRRHFGRHIRGLSKEVRSAKEAMDRAQREVERDP--GFVERSRLARLATEAFWLAIR 407
K + R+ FG + + + A ++++ Q ++ +P +AR F A+
Sbjct: 377 KLLNRQGFG----NIQHKTKEALDSLESIQSQLLTNPSDSLFRVEHVARKKWNFFAAAL- 436
Query: 408 LEEASLRHKSRIRWLKLGDQNSAFLHRSVRSRICRNNLLSIVDFEGGRVTSYDGLVQVAI 467
E+ R KSRI+WL+ GD N+ F H+ + + +N + + + RV + + ++ +
Sbjct: 437 --ESFYRQKSRIKWLQDGDANTRFFHKVILANQAKNLIKFLRMDDDVRVENVTQVKEMIV 496
Query: 468 NFFRNSLGSQM-IGYCELSPLLEEVVKFRWSEECSHALQALIRHDEIRKVLFTMDSSKAS 527
++ + LGS I + ++++ FR ++ + L AL EI +F M +KA
Sbjct: 497 AYYTHLLGSDSDILTPDSVQRIKDIHPFRCNDTLASRLSALPSDKEITAAVFAMPRNKAP 556
Query: 528 GPDGFSAGFFKDAWNVVGEDFSDVVLHFFDTCYLPTEVNATAITLISKRCGAERMEDFRP 587
GPD F+A FF ++W VV + V FF T +L NATAITLI K G +++ FRP
Sbjct: 557 GPDSFTAEFFWESWFVVKDSTIAAVKEFFRTGHLLKRFNATAITLIPKVTGVDQLSMFRP 616
Query: 588 ISCCNVVYKCIS 597
+SCC VVYK I+
Sbjct: 617 VSCCTVVYKIIT 621
BLAST of PI0028329 vs. TAIR 10
Match:
AT2G01050.1 (zinc ion binding;nucleic acid binding )
HSP 1 Score: 69.3 bits (168), Expect = 1.3e-11
Identity = 43/168 (25.60%), Postives = 75/168 (44.64%), Query Frame = 0
Query: 17 ITLFLIQLLIEKIWGKIEMPTITILENGLICFQFRHPKSIEWIISHGPWHLGGKPMLLHR 76
I + ++ + ++W + T+ L +F + ++ GPW + G +L+
Sbjct: 90 IPISVLNRKLRELWKPSGVMTVMDLPRQFFMIRFELEEEYMAALTGGPWRVLGNYLLVQD 149
Query: 77 WVLGIVPETFVFNFVPVWIKLGRIPMELWTESGIAVIASAICKPLSLDLATKERCRLSFA 136
W P PVW++L IP + + IA + +PL +D+ T + FA
Sbjct: 150 WSSRFDPLRDDIVTTPVWVRLSNIPYNYYHRCLLMEIARGLGRPLKVDMNTINFDKGRFA 209
Query: 137 RVCVEVEGGADLPSEVTVTLRGVEFIVPVTYEWEPRMCNSCHSFSHSV 185
RVC+EV P + TV + G + V YE ++C+SC + H V
Sbjct: 210 RVCIEV--NLAKPLKGTVLINGDRYF--VAYEGLSKICSSCGIYGHLV 253
BLAST of PI0028329 vs. TAIR 10
Match:
AT2G07760.1 (Zinc knuckle (CCHC-type) family protein )
HSP 1 Score: 58.2 bits (139), Expect = 2.9e-08
Identity = 36/125 (28.80%), Postives = 54/125 (43.20%), Query Frame = 0
Query: 59 IISHGPWHLGGKPMLLHRWVLGIVPETFVFNFVPVWIKLGRIPMELWTESGIAVIASAIC 118
I G WH+ M + W + + +PVW+ L IP L++ GI+ IAS +
Sbjct: 207 IPKRGLWHVDDCLMFVAPWSTVNTFDLPEISTIPVWVTLKNIPNRLYSILGISHIASGLG 266
Query: 119 KPLSLDLATKERCRLSFARVCVEVEGGADLPSEV-TVTLRGVEFIVPVTYEWEPRMCNSC 178
P++ + +S A + VEVE P + V +G +V V Y W P C C
Sbjct: 267 APMATYKPRLDPSLMSEANILVEVELSKAFPPRIAAVDKKGNISMVNVEYAWIPAKCGKC 326
Query: 179 HSFSH 183
H
Sbjct: 327 GQLGH 331
BLAST of PI0028329 vs. TAIR 10
Match:
AT5G28823.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: cultured cell; BEST Arabidopsis thaliana protein match is: Zinc knuckle (CCHC-type) family protein (TAIR:AT2G07760.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )
HSP 1 Score: 47.8 bits (112), Expect = 4.0e-05
Identity = 30/111 (27.03%), Postives = 47/111 (42.34%), Query Frame = 0
Query: 65 WHLGGKPMLLHRWVLGIVPETFVFNFVPVWIKLGRIPMELWTESGIAVIASAICKPLSLD 124
WH+ M + W E +P W+ L IP +L++ GI IAS I + +
Sbjct: 226 WHVDDCLMFVSTWSPVANFEVPEITMIPAWLTLKNIPNQLYSFKGIKWIASGIGETMLTS 285
Query: 125 LATKERCRLSFARVCVEVEGGADLPSEVTVTLR-GVEFIVPVTYEWEPRMC 175
+ ++ A++ VEV+ P V + G +V V Y W P C
Sbjct: 286 RPWLDPTQMGEAKILVEVKLDKPFPQRVALKEECGSITMVDVVYSWLPSKC 336
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
P14381 | 4.6e-14 | 24.77 | Transposon TX1 uncharacterized 149 kDa protein OS=Xenopus laevis OX=8355 PE=4 SV... | [more] |
P11369 | 6.8e-10 | 26.96 | LINE-1 retrotransposable element ORF2 protein OS=Mus musculus OX=10090 GN=Pol PE... | [more] |
O00370 | 1.7e-08 | 24.37 | LINE-1 retrotransposable element ORF2 protein OS=Homo sapiens OX=9606 PE=1 SV=1 | [more] |
Match Name | E-value | Identity | Description | |
A0A5A7V5J2 | 9.6e-209 | 49.63 | Non-LTR retroelement reverse transcriptase-like protein OS=Cucumis melo var. mak... | [more] |
A0A5D3DXQ8 | 3.6e-155 | 47.56 | Reverse transcriptase domain-containing protein OS=Cucumis melo var. makuwa OX=1... | [more] |
A0A5A7U4M4 | 4.7e-155 | 47.56 | Reverse transcriptase domain-containing protein OS=Cucumis melo var. makuwa OX=1... | [more] |
A0A5A7V275 | 4.1e-151 | 46.81 | Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold18... | [more] |
A0A5A7TZS0 | 9.2e-143 | 58.86 | Reverse transcriptase domain-containing protein OS=Cucumis melo var. makuwa OX=1... | [more] |
Match Name | E-value | Identity | Description | |
KAA0062888.1 | 2.0e-208 | 49.63 | non-LTR retroelement reverse transcriptase-like protein [Cucumis melo var. makuw... | [more] |
XP_031745634.1 | 1.4e-156 | 43.09 | uncharacterized protein LOC116406053 [Cucumis sativus] | [more] |
TYK28312.1 | 7.4e-155 | 47.56 | uncharacterized protein E5676_scaffold600G001370 [Cucumis melo var. makuwa] | [more] |
KAA0048521.1 | 9.7e-155 | 47.56 | uncharacterized protein E6C27_scaffold61G001420 [Cucumis melo var. makuwa] | [more] |
KAA0059841.1 | 8.5e-151 | 46.81 | reverse transcriptase [Cucumis melo var. makuwa] >TYK24796.1 reverse transcripta... | [more] |
Match Name | E-value | Identity | Description | |
AT1G43760.1 | 4.1e-26 | 30.95 | DNAse I-like superfamily protein | [more] |
AT2G01050.1 | 1.3e-11 | 25.60 | zinc ion binding;nucleic acid binding | [more] |
AT2G07760.1 | 2.9e-08 | 28.80 | Zinc knuckle (CCHC-type) family protein | [more] |
AT5G28823.1 | 4.0e-05 | 27.03 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow... | [more] |