Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAGGAGGAAGAAAAAAAAGAAAATTACAGAATAATGAGAAAGAAGAAGAGGAAGAAAATGAAGAAGAAGAAGAGAAAAAGATGGAGTTGTTCTATGCTTTGATTCAAAATACAAAGGCCATGAGAGACAGAATGAAATATTCAAAAGAATTAACAGAAGAAGAGAAATCAAAAGGGGTTTGGAATCCAAAGTTTCAACCACAAGATTTCATTGAAGAAGATGGTTATTACAATAATAAATCCAACATAACTCCTCTTCAATTGTCAGCTGCTTCATCTTCAACAACAAAACAGAGCAATGAACAGAAACAACAACAAGAACAAGATGAAGATGAAGATGAATATAAGGTAGGAAAAGGAAAAAATGGGCTTGACCTTAATCTCTCTCTTTGA
mRNA sequence
ATGGAAGGAGGAAGAAAAAAAAGAAAATTACAGAATAATGAGAAAGAAGAAGAGGAAGAAAATGAAGAAGAAGAAGAGAAAAAGATGGAGTTGTTCTATGCTTTGATTCAAAATACAAAGGCCATGAGAGACAGAATGAAATATTCAAAAGAATTAACAGAAGAAGAGAAATCAAAAGGGGTTTGGAATCCAAAGTTTCAACCACAAGATTTCATTGAAGAAGATGGTTATTACAATAATAAATCCAACATAACTCCTCTTCAATTGTCAGCTGCTTCATCTTCAACAACAAAACAGAGCAATGAACAGAAACAACAACAAGAACAAGATGAAGATGAAGATGAATATAAGGTAGGAAAAGGAAAAAATGGGCTTGACCTTAATCTCTCTCTTTGA
Coding sequence (CDS)
ATGGAAGGAGGAAGAAAAAAAAGAAAATTACAGAATAATGAGAAAGAAGAAGAGGAAGAAAATGAAGAAGAAGAAGAGAAAAAGATGGAGTTGTTCTATGCTTTGATTCAAAATACAAAGGCCATGAGAGACAGAATGAAATATTCAAAAGAATTAACAGAAGAAGAGAAATCAAAAGGGGTTTGGAATCCAAAGTTTCAACCACAAGATTTCATTGAAGAAGATGGTTATTACAATAATAAATCCAACATAACTCCTCTTCAATTGTCAGCTGCTTCATCTTCAACAACAAAACAGAGCAATGAACAGAAACAACAACAAGAACAAGATGAAGATGAAGATGAATATAAGGTAGGAAAAGGAAAAAATGGGCTTGACCTTAATCTCTCTCTTTGA
Protein sequence
MEGGRKKRKLQNNEKEEEEENEEEEEKKMELFYALIQNTKAMRDRMKYSKELTEEEKSKGVWNPKFQPQDFIEEDGYYNNKSNITPLQLSAASSSTTKQSNEQKQQQEQDEDEDEYKVGKGKNGLDLNLSL
Homology
BLAST of PI0028297 vs. ExPASy TrEMBL
Match:
A0A0A0LJ23 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G034770 PE=3 SV=1)
HSP 1 Score: 166.4 bits (420), Expect = 8.0e-38
Identity = 101/132 (76.52%), Postives = 109/132 (82.58%), Query Frame = 0
Query: 1 MEGGRKKRKLQNNEKEEEEENEEEEEKKMELFYALIQNTKAMRDRMKYSKELTEEEKSKG 60
ME GRK+RKLQ EE EEEE++KMELFYALIQNTKAMRD MKYSKELTEEEKSKG
Sbjct: 1 MESGRKRRKLQ-------EEEEEEEDEKMELFYALIQNTKAMRDGMKYSKELTEEEKSKG 60
Query: 61 VWNPKFQPQDFIEEDGY-YNNKSNITPLQLSAASSSTTKQSNEQKQQQEQDEDEDEYKVG 120
VWNPKFQP+DF EEDGY YNNKSNI PLQLSAASSSTTKQ NE+KQQ E++ YKV
Sbjct: 61 VWNPKFQPEDFNEEDGYNYNNKSNIIPLQLSAASSSTTKQFNEKKQQ----EEDKHYKVV 120
Query: 121 KGKNGLDLNLSL 132
+ K GLDLNLSL
Sbjct: 121 EVKKGLDLNLSL 121
BLAST of PI0028297 vs. ExPASy TrEMBL
Match:
A0A6J1DQG7 (LOW QUALITY PROTEIN: uncharacterized protein LOC111023284 OS=Momordica charantia OX=3673 GN=LOC111023284 PE=3 SV=1)
HSP 1 Score: 102.8 bits (255), Expect = 1.1e-18
Identity = 73/131 (55.73%), Postives = 99/131 (75.57%), Query Frame = 0
Query: 1 MEGGRKKRKLQNNEKEEEEENEEEEEKKMELFYALIQNTKAMRDRMKYSKELTEEEKSKG 60
ME R+KRKLQ++EKE ++E+EEEEE KM+LF+ALIQNTK++RDR+K + +++KSKG
Sbjct: 1 MESVRRKRKLQDDEKEAQKEDEEEEE-KMKLFFALIQNTKSIRDRVKSKQSAPQQDKSKG 60
Query: 61 VWNPKFQPQDFIEEDGYYNNKSNITPLQLSAASSSTTKQSNEQKQQQEQDEDEDEYKVGK 120
VWNPKFQP+DFIE+ + KSN TP A+SS+TKQ N+Q +++EQ +D+ E
Sbjct: 61 VWNPKFQPEDFIED---CDKKSNPTP---QFAASSSTKQRNKQ-EEEEQGKDKVE----- 118
Query: 121 GKNGLDLNLSL 132
G LDLNLSL
Sbjct: 121 GIEDLDLNLSL 118
BLAST of PI0028297 vs. ExPASy TrEMBL
Match:
A0A5C7GWM2 (Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_024772 PE=3 SV=1)
HSP 1 Score: 77.4 bits (189), Expect = 4.9e-11
Identity = 62/162 (38.27%), Postives = 88/162 (54.32%), Query Frame = 0
Query: 5 RKKRKLQNNEKEEEEENEEEEEKKMELFYALIQNTKAMRDRMKYS--------------- 64
RKKRK++N EEEE EE EE+KME FYAL++NTK +RDR++ S
Sbjct: 9 RKKRKMEN----EEEEEEENEEEKMEQFYALLRNTKDVRDRLRSSSTSSTGLHGSPIPSI 68
Query: 65 ----------------KELTEEEKSKGVWNPKFQPQDFIEEDGYY--NNKSNITPLQLSA 124
K+ EE+ VWNP FQP+DF+E+ +N N+ +
Sbjct: 69 PSMEINNNNNKQDQEKKKQLEEKALSAVWNPSFQPEDFMEDRNVIAKSNTVNLGSTSSTQ 128
Query: 125 ASSSTTKQSNEQKQQQEQDEDEDEYKVGKGKN--GLDLNLSL 132
++S +++ NE+ QQQ+Q E++D+ GK N LDLNLSL
Sbjct: 129 LAASASQEKNEEPQQQQQQEEDDKKDGGKDNNNLALDLNLSL 166
BLAST of PI0028297 vs. ExPASy TrEMBL
Match:
A0A2I4EAN7 (protein NIM1-INTERACTING 3-like OS=Juglans regia OX=51240 GN=LOC108987874 PE=3 SV=1)
HSP 1 Score: 73.6 bits (179), Expect = 7.1e-10
Identity = 66/142 (46.48%), Postives = 86/142 (60.56%), Query Frame = 0
Query: 1 MEGGRKKRKLQNNE-KEEEEENEEEEEKKMELFYALIQNTKAMRDRM---------KYSK 60
MEG KKRK+ N E EEEE EE+EEKKME F+ALI++T+ +RDR+ K K
Sbjct: 1 MEGKGKKRKMDNEEGGGEEEEEEEDEEKKMEKFFALIRSTRDVRDRLRTGVNESKDKEEK 60
Query: 61 ELTEEE-KSKGVWNPKFQPQDFIEEDGYYNNKSNITPLQLSAASSSTTKQSNEQKQQQEQ 120
E+E K+ VWNPKFQP+DF G Y KS+ TP AS+ E+K+++E+
Sbjct: 61 RPVEKEIKTTAVWNPKFQPEDF---PGEYKPKSS-TP----GASTPPGPSKREEKEEEEE 120
Query: 121 DEDEDEYKVGKGKNGLDLNLSL 132
+ED + K GLDLNLSL
Sbjct: 121 EEDRGDDK------GLDLNLSL 128
BLAST of PI0028297 vs. ExPASy TrEMBL
Match:
A0A061F4Z3 (Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_026807 PE=3 SV=1)
HSP 1 Score: 73.2 bits (178), Expect = 9.3e-10
Identity = 62/146 (42.47%), Postives = 85/146 (58.22%), Query Frame = 0
Query: 1 MEGGRKKRKLQN------NEKEEEEENEEEEEKKMELFYALIQNTKAMRDRMKY----SK 60
ME GRKKRK+ N +E+EEEE++EEEEE+K+E F+ALI++T+ MRDR++ SK
Sbjct: 1 MESGRKKRKMGNQEEEEDDEEEEEEDDEEEEEEKVEKFFALIRSTREMRDRLRNVPNGSK 60
Query: 61 ELTEEEKSK-----GVWNPKFQPQDFIEEDGYYNNKSNITPLQLSAASSSTTKQSNEQKQ 120
E E +K + VWNPKFQP+DF+E+ P L A + + + EQ+Q
Sbjct: 61 EEEERKKQEEKQVAAVWNPKFQPEDFMEDS---------KPKNLLAVNEAGPSSNREQEQ 120
Query: 121 QQEQDEDEDEYKVGKGKNGLDLNLSL 132
Q+ E G GLDL LSL
Sbjct: 121 GQDTKE-------GGEDGGLDLKLSL 130
BLAST of PI0028297 vs. NCBI nr
Match:
KGN61024.1 (hypothetical protein Csa_021295 [Cucumis sativus])
HSP 1 Score: 166.4 bits (420), Expect = 1.7e-37
Identity = 101/132 (76.52%), Postives = 109/132 (82.58%), Query Frame = 0
Query: 1 MEGGRKKRKLQNNEKEEEEENEEEEEKKMELFYALIQNTKAMRDRMKYSKELTEEEKSKG 60
ME GRK+RKLQ EE EEEE++KMELFYALIQNTKAMRD MKYSKELTEEEKSKG
Sbjct: 1 MESGRKRRKLQ-------EEEEEEEDEKMELFYALIQNTKAMRDGMKYSKELTEEEKSKG 60
Query: 61 VWNPKFQPQDFIEEDGY-YNNKSNITPLQLSAASSSTTKQSNEQKQQQEQDEDEDEYKVG 120
VWNPKFQP+DF EEDGY YNNKSNI PLQLSAASSSTTKQ NE+KQQ E++ YKV
Sbjct: 61 VWNPKFQPEDFNEEDGYNYNNKSNIIPLQLSAASSSTTKQFNEKKQQ----EEDKHYKVV 120
Query: 121 KGKNGLDLNLSL 132
+ K GLDLNLSL
Sbjct: 121 EVKKGLDLNLSL 121
BLAST of PI0028297 vs. NCBI nr
Match:
XP_038889660.1 (protein NIM1-INTERACTING 3 isoform X1 [Benincasa hispida])
HSP 1 Score: 126.7 bits (317), Expect = 1.5e-25
Identity = 84/119 (70.59%), Postives = 97/119 (81.51%), Query Frame = 0
Query: 1 MEGGRKKRKLQNNEKEEEEENEEEEEKKMELFYALIQNTKAMRDRMKYSKELTEEEKSKG 60
ME GRK+RKL EEEEE +++EE +M+L +ALIQN KAMR RMK SKE EEEKSKG
Sbjct: 1 MERGRKRRKL-----EEEEEEDDDEEGEMKLVFALIQNIKAMRGRMK-SKESPEEEKSKG 60
Query: 61 VWNPKFQPQDFIEEDGYYNNKSNITPLQLSAASSSTTKQSNEQKQQQEQDEDEDEYKVG 120
VWNPKFQP+DFI EDGYYNNKSNIT LQL AASSSTTK SN +K+QQEQ +D++KVG
Sbjct: 61 VWNPKFQPEDFI-EDGYYNNKSNIT-LQLPAASSSTTKHSNPKKEQQEQ---QDKHKVG 108
BLAST of PI0028297 vs. NCBI nr
Match:
XP_038889662.1 (protein NIM1-INTERACTING 3 isoform X3 [Benincasa hispida])
HSP 1 Score: 123.2 bits (308), Expect = 1.6e-24
Identity = 80/111 (72.07%), Postives = 91/111 (81.98%), Query Frame = 0
Query: 1 MEGGRKKRKLQNNEKEEEEENEEEEEKKMELFYALIQNTKAMRDRMKYSKELTEEEKSKG 60
ME GRK+RKL EEEEE +++EE +M+L +ALIQN KAMR RMK SKE EEEKSKG
Sbjct: 1 MERGRKRRKL-----EEEEEEDDDEEGEMKLVFALIQNIKAMRGRMK-SKESPEEEKSKG 60
Query: 61 VWNPKFQPQDFIEEDGYYNNKSNITPLQLSAASSSTTKQSNEQKQQQEQDE 112
VWNPKFQP+DFI EDGYYNNKSNIT LQL AASSSTTK SN +K+QQEQ +
Sbjct: 61 VWNPKFQPEDFI-EDGYYNNKSNIT-LQLPAASSSTTKHSNPKKEQQEQQD 103
BLAST of PI0028297 vs. NCBI nr
Match:
XP_038889661.1 (protein NIM1-INTERACTING 3 isoform X2 [Benincasa hispida])
HSP 1 Score: 123.2 bits (308), Expect = 1.6e-24
Identity = 80/111 (72.07%), Postives = 91/111 (81.98%), Query Frame = 0
Query: 1 MEGGRKKRKLQNNEKEEEEENEEEEEKKMELFYALIQNTKAMRDRMKYSKELTEEEKSKG 60
ME GRK+RKL EEEEE +++EE +M+L +ALIQN KAMR RMK SKE EEEKSKG
Sbjct: 1 MERGRKRRKL-----EEEEEEDDDEEGEMKLVFALIQNIKAMRGRMK-SKESPEEEKSKG 60
Query: 61 VWNPKFQPQDFIEEDGYYNNKSNITPLQLSAASSSTTKQSNEQKQQQEQDE 112
VWNPKFQP+DFI EDGYYNNKSNIT LQL AASSSTTK SN +K+QQEQ +
Sbjct: 61 VWNPKFQPEDFI-EDGYYNNKSNIT-LQLPAASSSTTKHSNPKKEQQEQQD 103
BLAST of PI0028297 vs. NCBI nr
Match:
KAG6599168.1 (hypothetical protein SDJN03_08946, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 118.2 bits (295), Expect = 5.2e-23
Identity = 76/141 (53.90%), Postives = 107/141 (75.89%), Query Frame = 0
Query: 1 MEGGRKKRKLQN-----NEKEEEEENEEEEEKKMELFYALIQNTKAMRDRMKYSKELTEE 60
MEGGRK+RKLQN +++EE+E+ +E+EE+KM+LF+ALIQNTKAMRD++K + E+
Sbjct: 1 MEGGRKRRKLQNIEEDDDDEEEDEDEDEDEEEKMKLFFALIQNTKAMRDKIKSKESAEED 60
Query: 61 EKSKGVWNPKFQPQDFIEEDGYYNNKS-NITPLQLSAASSSTTKQSNEQKQQQE----QD 120
+KGVWNPKFQP+DFI EDG+ +KS + ++L AASSS TKQSN++++ QE Q+
Sbjct: 61 NPTKGVWNPKFQPEDFI-EDGFDTHKSKSKAAIELGAASSSATKQSNQKEEHQEHQEHQE 120
Query: 121 EDEDEYKVGKGKNGLDLNLSL 132
E + ++ + K GLDLNLSL
Sbjct: 121 HQEHQEQLEEPKKGLDLNLSL 140
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A0A0LJ23 | 8.0e-38 | 76.52 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G034770 PE=3 SV=1 | [more] |
| A0A6J1DQG7 | 1.1e-18 | 55.73 | LOW QUALITY PROTEIN: uncharacterized protein LOC111023284 OS=Momordica charantia... | [more] |
| A0A5C7GWM2 | 4.9e-11 | 38.27 | Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_024772 PE=3 SV=1 | [more] |
| A0A2I4EAN7 | 7.1e-10 | 46.48 | protein NIM1-INTERACTING 3-like OS=Juglans regia OX=51240 GN=LOC108987874 PE=3 S... | [more] |
| A0A061F4Z3 | 9.3e-10 | 42.47 | Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_026807 PE=3 SV=1 | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| KGN61024.1 | 1.7e-37 | 76.52 | hypothetical protein Csa_021295 [Cucumis sativus] | [more] |
| XP_038889660.1 | 1.5e-25 | 70.59 | protein NIM1-INTERACTING 3 isoform X1 [Benincasa hispida] | [more] |
| XP_038889662.1 | 1.6e-24 | 72.07 | protein NIM1-INTERACTING 3 isoform X3 [Benincasa hispida] | [more] |
| XP_038889661.1 | 1.6e-24 | 72.07 | protein NIM1-INTERACTING 3 isoform X2 [Benincasa hispida] | [more] |
| KAG6599168.1 | 5.2e-23 | 53.90 | hypothetical protein SDJN03_08946, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
