PI0028262 (gene) Melon (PI 482460) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGCTAAAACTAGCGGCAATTGGAAAACAAGATCAAAACGCGTGGTGCGGGACAAGTCGAAATTTGAAACTTGAAAGTTCGCCAGTTTCGACTCCCATGGAAGAGACCGGATTTCATCCTGTAATTCTCTCATTTTCATGTTCGATCGTTTTCATTCAAGTTTAATTCACGTTTGATTGTTCAACCTTTCAATTTGGCGTCTATGTGTATAATTCACAGGATCTAATTCACGCCATCTTCAAGCTCGAGTGGAGCAGAAGATCACTTGTTAGGACTTCGGATCACTCTCTCTTTCTGTCTATCTATCTGTTTTTACTTCTTCGTTCTTCTTTTCTGATCACTTCTTCATTTTCAGAGCGCGAGAAAAACGAGAATCCGGATGCCATGGATTGTGAGGTGGTTCCCTTTCCGTGAATTTCTTGTGAAAATTTATTTTCAACTGCTATTGTTTCTCTCGGGAAAATGCTTGTCCATATTTTTGCGTTTCGATTTCACTGGCACTAGGTTAATCTTGAATTGATATGTCGTCCAGCGAATTTAAACTAAAAATCAGTGATTATCTATCTTATTGCAAACTTGGAGTAAGACTCTTTCTCGACTAGACCAGTGGGGTTGATCTTTGGCTTACTTATCTTTGTCAGGTTGACGCTGGGGCTGGAACATCCAAGAAAAGCAGGCCAATGTCAGGTATCATTAGTTTTTACTTCAACAACTTACTATCATTTCATTTTTAAATTACAGTTTCTATTAGGAGTGCTATTTCCCATCGAGCTGCTGTTATTTGAACGGTTACCGTCAACTGGGAGATGTAGAAACCATTTCTGACCTCGCTGTTTCAATTTTCCATGCAGCTAATGCAAATGCTCTTAAATTGAGCTCTAAACTTCTACAAATTTTTATCTCAGGTATCTATGGTGAAACGCAGATGGTTAATTTGGTGTCTAATGTTTTCTTCTTCTTTTAGGTTAACTTTTCTATTTGCAGAGGCTGTGCAGCGCGCTGCAACAATTGCAGAAGCAGAAGGTATTAGTAGAATTGAAACCACTCATTTGGAGAGAGTTCTTCCACAGTTACTACTGGATTTTTGA ATGCTAAAACTAGCGGCAATTGGAAAACAAGATCAAAACGCGTGGTGCGGGACAAGTCGAAATTTGAAACTTGAAAGTTCGCCAGTTTCGACTCCCATGGAAGAGACCGGATTTCATCCTGATCTAATTCACGCCATCTTCAAGCTCGAGTGGAGCAGAAGATCACTTCGCGAGAAAAACGAGAATCCGGATGCCATGGATTGTGAGGTTGACGCTGGGGCTGGAACATCCAAGAAAAGCAGGCCAATGTCAGCTAATGCAAATGCTCTTAAATTGAGCTCTAAACTTCTACAAATTTTTATCTCAGAGGCTGTGCAGCGCGCTGCAACAATTGCAGAAGCAGAAGGTATTAGTAGAATTGAAACCACTCATTTGGAGAGAGTTCTTCCACAGTTACTACTGGATTTTTGA ATGCTAAAACTAGCGGCAATTGGAAAACAAGATCAAAACGCGTGGTGCGGGACAAGTCGAAATTTGAAACTTGAAAGTTCGCCAGTTTCGACTCCCATGGAAGAGACCGGATTTCATCCTGATCTAATTCACGCCATCTTCAAGCTCGAGTGGAGCAGAAGATCACTTCGCGAGAAAAACGAGAATCCGGATGCCATGGATTGTGAGGTTGACGCTGGGGCTGGAACATCCAAGAAAAGCAGGCCAATGTCAGCTAATGCAAATGCTCTTAAATTGAGCTCTAAACTTCTACAAATTTTTATCTCAGAGGCTGTGCAGCGCGCTGCAACAATTGCAGAAGCAGAAGGTATTAGTAGAATTGAAACCACTCATTTGGAGAGAGTTCTTCCACAGTTACTACTGGATTTTTGA MLKLAAIGKQDQNAWCGTSRNLKLESSPVSTPMEETGFHPDLIHAIFKLEWSRRSLREKNENPDAMDCEVDAGAGTSKKSRPMSANANALKLSSKLLQIFISEAVQRAATIAEAEGISRIETTHLERVLPQLLLDF Homology
BLAST of PI0028262 vs. ExPASy Swiss-Prot
Match: Q8L7N3 (Protein MHF2 homolog OS=Arabidopsis thaliana OX=3702 GN=MHF2 PE=3 SV=1) HSP 1 Score: 114.4 bits (285), Expect = 1.0e-24 Identity = 66/100 (66.00%), Postives = 78/100 (78.00%), Query Frame = 0
BLAST of PI0028262 vs. ExPASy Swiss-Prot
Match: P0DJH7 (Centromere protein X OS=Gallus gallus OX=9031 GN=CENPX PE=1 SV=1) HSP 1 Score: 54.7 bits (130), Expect = 9.6e-07 Identity = 26/51 (50.98%), Postives = 39/51 (76.47%), Query Frame = 0
BLAST of PI0028262 vs. ExPASy Swiss-Prot
Match: Q2NKU0 (Centromere protein X OS=Bos taurus OX=9913 GN=CENPX PE=3 SV=1) HSP 1 Score: 52.0 bits (123), Expect = 6.2e-06 Identity = 26/58 (44.83%), Postives = 41/58 (70.69%), Query Frame = 0
BLAST of PI0028262 vs. ExPASy Swiss-Prot
Match: A8MT69 (Centromere protein X OS=Homo sapiens OX=9606 GN=CENPX PE=1 SV=1) HSP 1 Score: 46.2 bits (108), Expect = 3.4e-04 Identity = 25/58 (43.10%), Postives = 36/58 (62.07%), Query Frame = 0
BLAST of PI0028262 vs. ExPASy Swiss-Prot
Match: Q8C4X1 (Centromere protein X OS=Mus musculus OX=10090 GN=Cenpx PE=2 SV=1) HSP 1 Score: 46.2 bits (108), Expect = 3.4e-04 Identity = 24/51 (47.06%), Postives = 35/51 (68.63%), Query Frame = 0
BLAST of PI0028262 vs. ExPASy TrEMBL
Match: A0A0A0LU58 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G002850 PE=3 SV=1) HSP 1 Score: 206.5 bits (524), Expect = 7.3e-50 Identity = 118/144 (81.94%), Postives = 123/144 (85.42%), Query Frame = 0
BLAST of PI0028262 vs. ExPASy TrEMBL
Match: A0A1S3CLK5 (centromere protein X isoform X2 OS=Cucumis melo OX=3656 GN=LOC103502356 PE=3 SV=1) HSP 1 Score: 192.6 bits (488), Expect = 1.1e-45 Identity = 101/105 (96.19%), Postives = 102/105 (97.14%), Query Frame = 0
BLAST of PI0028262 vs. ExPASy TrEMBL
Match: A0A5D3BH88 (Centromere protein X isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold350G00890 PE=3 SV=1) HSP 1 Score: 185.3 bits (469), Expect = 1.7e-43 Identity = 96/103 (93.20%), Postives = 100/103 (97.09%), Query Frame = 0
BLAST of PI0028262 vs. ExPASy TrEMBL
Match: A0A5A7UPL0 (Centromere protein X isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G00860 PE=3 SV=1) HSP 1 Score: 182.2 bits (461), Expect = 1.5e-42 Identity = 96/102 (94.12%), Postives = 97/102 (95.10%), Query Frame = 0
BLAST of PI0028262 vs. ExPASy TrEMBL
Match: A0A1S3CLJ8 (centromere protein X isoform X1 OS=Cucumis melo OX=3656 GN=LOC103502356 PE=3 SV=1) HSP 1 Score: 180.3 bits (456), Expect = 5.6e-42 Identity = 97/106 (91.51%), Postives = 99/106 (93.40%), Query Frame = 0
BLAST of PI0028262 vs. NCBI nr
Match: XP_031736274.1 (protein MHF2 homolog isoform X2 [Cucumis sativus] >KGN63516.1 hypothetical protein Csa_013243 [Cucumis sativus]) HSP 1 Score: 206.5 bits (524), Expect = 1.5e-49 Identity = 118/144 (81.94%), Postives = 123/144 (85.42%), Query Frame = 0
BLAST of PI0028262 vs. NCBI nr
Match: XP_031736273.1 (protein MHF2 homolog isoform X1 [Cucumis sativus]) HSP 1 Score: 197.2 bits (500), Expect = 9.1e-47 Identity = 118/157 (75.16%), Postives = 123/157 (78.34%), Query Frame = 0
BLAST of PI0028262 vs. NCBI nr
Match: XP_008464489.1 (PREDICTED: centromere protein X isoform X2 [Cucumis melo]) HSP 1 Score: 192.6 bits (488), Expect = 2.2e-45 Identity = 101/105 (96.19%), Postives = 102/105 (97.14%), Query Frame = 0
BLAST of PI0028262 vs. NCBI nr
Match: TYJ98487.1 (centromere protein X isoform X2 [Cucumis melo var. makuwa]) HSP 1 Score: 185.3 bits (469), Expect = 3.6e-43 Identity = 96/103 (93.20%), Postives = 100/103 (97.09%), Query Frame = 0
BLAST of PI0028262 vs. NCBI nr
Match: KAA0057803.1 (centromere protein X isoform X2 [Cucumis melo var. makuwa]) HSP 1 Score: 182.2 bits (461), Expect = 3.0e-42 Identity = 96/102 (94.12%), Postives = 97/102 (95.10%), Query Frame = 0
BLAST of PI0028262 vs. TAIR 10
Match: AT1G78790.1 (unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2008 (InterPro:IPR018552); Has 69 Blast hits to 69 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 33; Fungi - 0; Plants - 33; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). ) HSP 1 Score: 114.4 bits (285), Expect = 7.2e-26 Identity = 66/100 (66.00%), Postives = 78/100 (78.00%), Query Frame = 0
BLAST of PI0028262 vs. TAIR 10
Match: AT1G78790.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2008 (InterPro:IPR018552); Has 27 Blast hits to 27 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 27; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 82.4 bits (202), Expect = 3.0e-16 Identity = 53/100 (53.00%), Postives = 62/100 (62.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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