PI0028261 (gene) Melon (PI 482460) v1

Overview


Name	PI0028261
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Pentatricopeptide repeat-containing protein
Location	chr04: 30997548 .. 30999898 (+)
RNA-Seq Expression	PI0028261
Synteny	PI0028261

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATCTCCATTTGCTGATGTCATGTTCGCGATTTTTGTTAATTTACCCAAATCTTAAAGGACATTTTCTCAGAGTTCTTTGACATATTTTGTCCAATTTTGGGGTCACCCATCGGACGGACTCATTTAGTAACTATTACAAGCCATGACCGAAACTCTGGCGACTGTCAGGTATAAGCTCGAACAGCCATTAACACATTCCTAAGCATTGCATCGCGAACTCGGGAGCAAACAATGGCGTCGACTGGAAAAAGGGTTTTGACATTGGCCAGAAGCGTTTCCCTCAGTTTTCCACTTCAGCCACAGCAACCTCATTATCCACTTGGTTTCCGGAGATTCTTCTCCACTGATCCTTCGATTTCCATTACGAATCCTCTGCTTCTCAAATTGCTTCAGGAGCCAACTTCGTCTGTCAAATCCGTGCTCGATTCCCAGGAAAATGGTTTTCTCAGTAGCTCCCCTCTTTCCTTGAATGCCCTTGTTACGTCTCTTATATCTTCTTCAATGCCCAAGAAGGCTCAGCTGGTAACTCTCCCTATTCTCTCTTTTTTCTCCATTGTTGTCTGTTTTGTTGGTTGTTGAATGAATCTAGGGTAAGAAAAGCTACGGATTCTGTGTGTTAGTTGGTGGTATCTGAATTGGAGGGATTATGTAACTTTTTTTTCCTTCAAATTTTCATCATCAATGTGAAGAGACTTGGACAAACTCTGGAATGAAATTGAAATCAGTAAATGAAGGCAATTAATAAAGAACAAAGATAAAAGGCATTTCGTCTAAGACGTTAAACTTGTAAAGAGAAATAAACCAATGACTTAGAAAGAGAACACCCTAGCGGATGCAAGCTATTGGAGCTTGATATGAAAGATCCTTTGATTTCTTTTAAACCATAACTCAGAATGAAGAGCTTTAACGAGAAAAGAACATTAAAGATGGATTTTGGAGCCAAAGATGGAACGATAAGCAATTAAAAGCAATAAATATTTGGGTAGAGAACTCCTAGACGAGATAATGTAACTTGAACTTGCATAATTCCTTAAGGTCAGTGAGGATTGATAGTGATTTTTAAATGGTTAAAAGTACTTTCTTCATCTTCTAAATCATTCCTAAGACGGTGTAAAATCAAACATTAAATTAAATTTAAATGACTAAAGGCATGTGTTTGAGCGATTTTAAACATATAACAATGTTCGACAGACTGATTTTGCTCCCAAACATACCCTTGCTATCAATTAAATAATGTTCTGTTGGAACTGGTTTCATGTTTTCAACTGTCTTTTCTTCCAATGGCTTCAGTGATTGGCAAGTTTATCTTTGAGCGATCATGGTATCTCATGATTAACCTTTTTTTTTTTTTTTTTTTTGGAGCTTTATCAGGTTTTGGAATGGAAATTGGAGAAAATGAGCAAAGAAAATAAGAGAGATACTGATTTGTACATCAACCTGATACGTCTATGCGGAGAGCTTAAAAATTCCTCTCTTGCAATGCGTGCCTTCACTGTTATGGAATTTCAAGGAGTTAAACCCACGGTGACTGCTTTCAATTCACTTATAGAGGCTTGTATATCTTCCCATAATATGATAAGTGCCTTAAGCATATTTGAAGTAATGAAAAACTCCATAAGTTTTAAACCCAATACTGACACTTTCTATTATTTCATTTCTGCATTCGCCAAATTGCACGATGTTAACTCTATGCAAGCATGGTATTCAGCCAAAAAAGCGTTTGAATTCTCTCCTGACCTTCGAACCTATGAAGCTCTTATACATGGTAGTGTGAAATCAAAGTGCTTTGATTTTGCTGTTAAATGTTTTGAGGAAATGATGTTATCTGACATTGTACCCAACACAATCATATTGGAGAATATGCTTGAAGGGCTCTGTAAGAGGAAAAATTTGGATGAAGTGAAGAAGTTCTTAAATGTTGTGCTTGACAACGGATGGGAGATCAATTGGAATGTGGTTGAGAAATTGATTCCAGTATGGTTTGAATCTGGGGAGTTGGAAACCCTGGATCACCTGTTTTTGCATTATAAGTTTGCTTCTAAAGGGTAGTGTATTCATTTTAGTACTTTTGAGGTGGCTAGCCTCTCTAAGAAAACTGATGATTGGATGATGGACGGTCTTGATGGTCGAAGTTCATGTGGAAAAGGAAAAATCCAATGGACTATTAACAATATGAGGGCTCTTCTTTATTAGTTTGTGGAAAGGGGTTTCCTCTGGATAAAATGCACTGATTGTGTGAACTAAAATGGTGAGAGAATATTTTATTGATTTCAATTTCAATGTAACAAAAGTTATAATTTCTAACTCAATATGGCAACCATTTAACCAAGCTAAAGTCTTGTTTTGCTTCC

mRNA sequence

ATCTCCATTTGCTGATGTCATGTTCGCGATTTTTGTTAATTTACCCAAATCTTAAAGGACATTTTCTCAGAGTTCTTTGACATATTTTGTCCAATTTTGGGGTCACCCATCGGACGGACTCATTTAGTAACTATTACAAGCCATGACCGAAACTCTGGCGACTGTCAGGTATAAGCTCGAACAGCCATTAACACATTCCTAAGCATTGCATCGCGAACTCGGGAGCAAACAATGGCGTCGACTGGAAAAAGGGTTTTGACATTGGCCAGAAGCGTTTCCCTCAGTTTTCCACTTCAGCCACAGCAACCTCATTATCCACTTGGTTTCCGGAGATTCTTCTCCACTGATCCTTCGATTTCCATTACGAATCCTCTGCTTCTCAAATTGCTTCAGGAGCCAACTTCGTCTGTCAAATCCGTGCTCGATTCCCAGGAAAATGGTTTTCTCAGTAGCTCCCCTCTTTCCTTGAATGCCCTTGTTACGTCTCTTATATCTTCTTCAATGCCCAAGAAGGCTCAGCTGGTTTTGGAATGGAAATTGGAGAAAATGAGCAAAGAAAATAAGAGAGATACTGATTTGTACATCAACCTGATACGTCTATGCGGAGAGCTTAAAAATTCCTCTCTTGCAATGCGTGCCTTCACTGTTATGGAATTTCAAGGAGTTAAACCCACGGTGACTGCTTTCAATTCACTTATAGAGGCTTGTATATCTTCCCATAATATGATAAGTGCCTTAAGCATATTTGAAGTAATGAAAAACTCCATAAGTTTTAAACCCAATACTGACACTTTCTATTATTTCATTTCTGCATTCGCCAAATTGCACGATGTTAACTCTATGCAAGCATGGTATTCAGCCAAAAAAGCGTTTGAATTCTCTCCTGACCTTCGAACCTATGAAGCTCTTATACATGGTAGTGTGAAATCAAAGTGCTTTGATTTTGCTGTTAAATGTTTTGAGGAAATGATGTTATCTGACATTGTACCCAACACAATCATATTGGAGAATATGCTTGAAGGGCTCTGTAAGAGGAAAAATTTGGATGAAGTGAAGAAGTTCTTAAATGTTGTGCTTGACAACGGATGGGAGATCAATTGGAATGTGGTTGAGAAATTGATTCCAGTATGGTTTGAATCTGGGGAGTTGGAAACCCTGGATCACCTGTTTTTGCATTATAAGTTTGCTTCTAAAGGGTAGTGTATTCATTTTAGTACTTTTGAGGTGGCTAGCCTCTCTAAGAAAACTGATGATTGGATGATGGACGGTCTTGATGGTCGAAGTTCATGTGGAAAAGGAAAAATCCAATGGACTATTAACAATATGAGGGCTCTTCTTTATTAGTTTGTGGAAAGGGGTTTCCTCTGGATAAAATGCACTGATTGTGTGAACTAAAATGGTGAGAGAATATTTTATTGATTTCAATTTCAATGTAACAAAAGTTATAATTTCTAACTCAATATGGCAACCATTTAACCAAGCTAAAGTCTTGTTTTGCTTCC

Coding sequence (CDS)

ATGGCGTCGACTGGAAAAAGGGTTTTGACATTGGCCAGAAGCGTTTCCCTCAGTTTTCCACTTCAGCCACAGCAACCTCATTATCCACTTGGTTTCCGGAGATTCTTCTCCACTGATCCTTCGATTTCCATTACGAATCCTCTGCTTCTCAAATTGCTTCAGGAGCCAACTTCGTCTGTCAAATCCGTGCTCGATTCCCAGGAAAATGGTTTTCTCAGTAGCTCCCCTCTTTCCTTGAATGCCCTTGTTACGTCTCTTATATCTTCTTCAATGCCCAAGAAGGCTCAGCTGGTTTTGGAATGGAAATTGGAGAAAATGAGCAAAGAAAATAAGAGAGATACTGATTTGTACATCAACCTGATACGTCTATGCGGAGAGCTTAAAAATTCCTCTCTTGCAATGCGTGCCTTCACTGTTATGGAATTTCAAGGAGTTAAACCCACGGTGACTGCTTTCAATTCACTTATAGAGGCTTGTATATCTTCCCATAATATGATAAGTGCCTTAAGCATATTTGAAGTAATGAAAAACTCCATAAGTTTTAAACCCAATACTGACACTTTCTATTATTTCATTTCTGCATTCGCCAAATTGCACGATGTTAACTCTATGCAAGCATGGTATTCAGCCAAAAAAGCGTTTGAATTCTCTCCTGACCTTCGAACCTATGAAGCTCTTATACATGGTAGTGTGAAATCAAAGTGCTTTGATTTTGCTGTTAAATGTTTTGAGGAAATGATGTTATCTGACATTGTACCCAACACAATCATATTGGAGAATATGCTTGAAGGGCTCTGTAAGAGGAAAAATTTGGATGAAGTGAAGAAGTTCTTAAATGTTGTGCTTGACAACGGATGGGAGATCAATTGGAATGTGGTTGAGAAATTGATTCCAGTATGGTTTGAATCTGGGGAGTTGGAAACCCTGGATCACCTGTTTTTGCATTATAAGTTTGCTTCTAAAGGGTAG

Protein sequence

MASTGKRVLTLARSVSLSFPLQPQQPHYPLGFRRFFSTDPSISITNPLLLKLLQEPTSSVKSVLDSQENGFLSSSPLSLNALVTSLISSSMPKKAQLVLEWKLEKMSKENKRDTDLYINLIRLCGELKNSSLAMRAFTVMEFQGVKPTVTAFNSLIEACISSHNMISALSIFEVMKNSISFKPNTDTFYYFISAFAKLHDVNSMQAWYSAKKAFEFSPDLRTYEALIHGSVKSKCFDFAVKCFEEMMLSDIVPNTIILENMLEGLCKRKNLDEVKKFLNVVLDNGWEINWNVVEKLIPVWFESGELETLDHLFLHYKFASKG

Homology

[Close]

BLAST of PI0028261 vs. ExPASy Swiss-Prot
Match: Q9LQ14 (Pentatricopeptide repeat-containing protein At1g62930, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At1g62930 PE=2 SV=2)

HSP 1 Score: 81.6 bits (200), Expect = 1.7e-14
Identity = 61/231 (26.41%), Postives = 106/231 (45.89%), Query Frame = 0


Query: 87  ISSSMPKKAQLVLEWKLEKMSKENKRDTD--LYINLIRLCGELKNSSLAMRAFTVMEFQG 146
           + + + K+  + L   L K  ++ K + D  +Y  +I      KN + A+  FT M+ +G
Sbjct: 226 VVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKG 285

Query: 147 VKPTVTAFNSLIEACISSHNMISALS--IFEVMKNSISFKPNTDTFYYFISAFAKLHDVN 206
           ++P V  +NSLI  C+ ++   S  S  + ++++  I+  PN  TF   I AF K   + 
Sbjct: 286 IRPNVVTYNSLIR-CLCNYGRWSDASRLLSDMIERKIN--PNVVTFSALIDAFVKEGKLV 345

Query: 207 SMQAWYSAKKAFEFSPDLRTYEALIHGSVKSKCFDFAVKCFEEMMLSDIVPNTIILENML 266
             +  Y         PD+ TY +LI+G       D A   FE M+  D  PN +    ++
Sbjct: 346 EAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLI 405

Query: 267 EGLCKRKNLDEVKKFLNVVLDNGWEINWNVVEKLIPVWFESGELETLDHLF 314
           +G CK K ++E  +    +   G   N      LI   F++G+ +    +F
Sbjct: 406 KGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIF 453

[Close]

BLAST of PI0028261 vs. ExPASy Swiss-Prot
Match: Q9CAN0 (Pentatricopeptide repeat-containing protein At1g63130, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g63130 PE=2 SV=1)

HSP 1 Score: 78.2 bits (191), Expect = 1.9e-13
Identity = 64/237 (27.00%), Postives = 109/237 (45.99%), Query Frame = 0


Query: 82  LVT-SLISSSMPKKAQLVLEWKLEKMSKENKRDTD--LYINLIRLCGELKNSSLAMRAFT 141
           LVT  ++ + + K+  + L   L K  ++ K +    +Y  +I      KN + A+  FT
Sbjct: 221 LVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFT 280

Query: 142 VMEFQGVKPTVTAFNSLIEACISSHNMISALS--IFEVMKNSISFKPNTDTFYYFISAFA 201
            M+ +G++P V  +NSLI  C+ ++   S  S  + ++++  I+  PN  TF   I AF 
Sbjct: 281 EMDNKGIRPNVVTYNSLIR-CLCNYGRWSDASRLLSDMIERKIN--PNVVTFSALIDAFV 340

Query: 202 KLHDVNSMQAWYSAKKAFEFSPDLRTYEALIHGSVKSKCFDFAVKCFEEMMLSDIVPNTI 261
           K   +   +  Y         PD+ TY +LI+G       D A   FE M+  D  PN +
Sbjct: 341 KEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVV 400

Query: 262 ILENMLEGLCKRKNLDEVKKFLNVVLDNGWEINWNVVEKLIPVWFESGELETLDHLF 314
               +++G CK K +DE  +    +   G   N      LI  +F++ E +    +F
Sbjct: 401 TYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVF 454

[Close]

BLAST of PI0028261 vs. ExPASy Swiss-Prot
Match: Q9M302 (Pentatricopeptide repeat-containing protein At3g48810 OS=Arabidopsis thaliana OX=3702 GN=At3g48810 PE=2 SV=1)

HSP 1 Score: 75.1 bits (183), Expect = 1.6e-12
Identity = 54/234 (23.08%), Postives = 99/234 (42.31%), Query Frame = 0


Query: 80  NALVTSLISSSMPKKAQLVLEWKLEKMSKENKRDTDLYINLIRLCGELKNSSLAMRAFTV 139
           NAL+  L      K A  ++   +EK    N       IN++   G+++   LA    T 
Sbjct: 250 NALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIE---LAFSFLTQ 309

Query: 140 MEFQGVKPTVTAFNSLIEACISSHNMISALSIFEVMKNSISFKPNTDTFYYFISAFAKLH 199
           M  +G  P +   +SL++ C        AL ++  M      +PN   +   +  F    
Sbjct: 310 MLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHG 369

Query: 200 DVNSMQAWYSAKKAFEFSPDLRTYEALIHGSVKSKCFDFAVKCFEEMMLSDIVPNTIILE 259
           ++    + +S  +    SP++RTY +LI+G  K    D AV  + +M+ S   PN ++  
Sbjct: 370 NIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYT 429

Query: 260 NMLEGLCKRKNLDEVKKFLNVVLDNGWEINWNVVEKLIPVWFESGELETLDHLF 314
           NM+E LC+     E +  + ++       +       I    ++G L+  + +F
Sbjct: 430 NMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVF 480

[Close]

BLAST of PI0028261 vs. ExPASy Swiss-Prot
Match: Q9SH26 (Pentatricopeptide repeat-containing protein At1g63400 OS=Arabidopsis thaliana OX=3702 GN=At1g63400 PE=2 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 8.0e-12
Identity = 59/238 (24.79%), Postives = 108/238 (45.38%), Query Frame = 0


Query: 80  NALVTSLISSSMPKKAQLVLEWKLEKMSKENKRDTD--LYINLIRLCGELKNSSLAMRAF 139
           N +   ++ + + K+  + L + L    +  K + +  +Y  +I    + ++   A+  F
Sbjct: 224 NLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLF 283

Query: 140 TVMEFQGVKPTVTAFNSLIEACISSHNMISALS--IFEVMKNSISFKPNTDTFYYFISAF 199
           T ME +GV+P V  ++SLI +C+ ++   S  S  + ++++  I+  PN  TF   I AF
Sbjct: 284 TEMENKGVRPNVITYSSLI-SCLCNYERWSDASRLLSDMIERKIN--PNVVTFNALIDAF 343

Query: 200 AKLHDVNSMQAWYSAKKAFEFSPDLRTYEALIHGSVKSKCFDFAVKCFEEMMLSDIVPNT 259
            K   +   +  Y         PD+ TY +LI+G       D A   FE M+  D  PN 
Sbjct: 344 VKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNV 403

Query: 260 IILENMLEGLCKRKNLDEVKKFLNVVLDNGWEINWNVVEKLIPVWFESGELETLDHLF 314
           +    ++ G CK K +DE  +    +   G   N      LI  +F++ + +    +F
Sbjct: 404 VTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVF 458

[Close]

BLAST of PI0028261 vs. ExPASy Swiss-Prot
Match: Q9C8T7 (Pentatricopeptide repeat-containing protein At1g63330 OS=Arabidopsis thaliana OX=3702 GN=At1g63330 PE=2 SV=2)

HSP 1 Score: 62.8 bits (151), Expect = 8.3e-09
Identity = 56/238 (23.53%), Postives = 104/238 (43.70%), Query Frame = 0


Query: 80  NALVTSLISSSMPKKAQLVLEWKLEKMSKENKRDTDLYI--NLIRLCGELKNSSLAMRAF 139
           N +   ++ + + K+  + L + L    +  K + D+ I   +I    + ++   A+  F
Sbjct: 149 NLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLF 208

Query: 140 TVMEFQGVKPTVTAFNSLIEACISSHNMISALSIFEVMKNSISFK--PNTDTFYYFISAF 199
             ME +G++P V  ++SLI +C+ S+   S  S  +++ + I  K  PN  TF   I AF
Sbjct: 209 KEMETKGIRPNVVTYSSLI-SCLCSYGRWSDAS--QLLSDMIEKKINPNLVTFNALIDAF 268

Query: 200 AKLHDVNSMQAWYSAKKAFEFSPDLRTYEALIHGSVKSKCFDFAVKCFEEMMLSDIVPNT 259
            K       +  +         PD+ TY +LI+G       D A + FE M+  D  P+ 
Sbjct: 269 VKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDL 328

Query: 260 IILENMLEGLCKRKNLDEVKKFLNVVLDNGWEINWNVVEKLIPVWFESGELETLDHLF 314
                +++G CK K +++  +    +   G   +      LI   F  G+ +    +F
Sbjct: 329 DTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVF 383

[Close]

BLAST of PI0028261 vs. ExPASy TrEMBL
Match: A0A5D3E5Z9 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G006320 PE=3 SV=1)

HSP 1 Score: 540.4 bits (1391), Expect = 5.0e-150
Identity = 277/312 (88.78%), Postives = 287/312 (91.99%), Query Frame = 0


Query: 1   MASTGKRVLTLARSVSLSFPLQPQQPHYPLGFRRFFSTDPSISITNPLLLKLLQEPTSSV 60
           MASTGKRVLTLAR+VS S PLQ QQPHYPL FR FFSTDPSISITNPLLLKLLQEPTSSV
Sbjct: 1   MASTGKRVLTLARNVSFSIPLQSQQPHYPLIFRGFFSTDPSISITNPLLLKLLQEPTSSV 60

Query: 61  KSVLDSQENGFLSSSPLSLNALVTSLISSSMPKKAQLVLEWKLEKMSKENKRDTDLYINL 120
           KSVLDSQENGFL SS LSLN LVTSLISSS PKKAQLVLEWKLEKMSK N+ D DLYINL
Sbjct: 61  KSVLDSQENGFLCSSRLSLNDLVTSLISSSKPKKAQLVLEWKLEKMSKRNESDPDLYINL 120

Query: 121 IRLCGELKNSSLAMRAFTVMEFQGVKPTVTAFNSLIEACISSHNMISALSIFEVMKNSIS 180
           IRLCG+L++S LAMR FTVMEFQGVKPTVTAFNSLIEACISSHNMI+A  IFEVMKNS +
Sbjct: 121 IRLCGKLRDSFLAMRVFTVMEFQGVKPTVTAFNSLIEACISSHNMITAFGIFEVMKNSKN 180

Query: 181 FKPNTDTFYYFISAFAKLHDVNSMQAWYSAKKAFEFSPDLRTYEALIHGSVKSKCFDFAV 240
           FKPNTDTFYYFIS F+KL DVNSMQAWYSAKKAFEFSPDLRTYEALIHGSVKSKCFDFAV
Sbjct: 181 FKPNTDTFYYFISEFSKLRDVNSMQAWYSAKKAFEFSPDLRTYEALIHGSVKSKCFDFAV 240

Query: 241 KCFEEMMLSDIVPNTIILENMLEGLCKRKNLDEVKKFLNVVLDNGWEINWNVVEKLIPVW 300
           KCFEEMMLSDIVPN IILENMLEGLCKRKN DEVKKFLNVVLDNGWEINWNVVEK IPVW
Sbjct: 241 KCFEEMMLSDIVPNAIILENMLEGLCKRKNFDEVKKFLNVVLDNGWEINWNVVEKFIPVW 300

Query: 301 FESGELETLDHL 313
           FESGELE +  +
Sbjct: 301 FESGELEGMKEI 312

[Close]

BLAST of PI0028261 vs. ExPASy TrEMBL
Match: A0A1S3CS56 (pentatricopeptide repeat-containing protein At3g09060-like OS=Cucumis melo OX=3656 GN=LOC103503719 PE=3 SV=1)

HSP 1 Score: 540.4 bits (1391), Expect = 5.0e-150
Identity = 277/312 (88.78%), Postives = 287/312 (91.99%), Query Frame = 0


Query: 1   MASTGKRVLTLARSVSLSFPLQPQQPHYPLGFRRFFSTDPSISITNPLLLKLLQEPTSSV 60
           MASTGKRVLTLAR+VS S PLQ QQPHYPL FR FFSTDPSISITNPLLLKLLQEPTSSV
Sbjct: 1   MASTGKRVLTLARNVSFSIPLQSQQPHYPLIFRGFFSTDPSISITNPLLLKLLQEPTSSV 60

Query: 61  KSVLDSQENGFLSSSPLSLNALVTSLISSSMPKKAQLVLEWKLEKMSKENKRDTDLYINL 120
           KSVLDSQENGFL SS LSLN LVTSLISSS PKKAQLVLEWKLEKMSK N+ D DLYINL
Sbjct: 61  KSVLDSQENGFLCSSRLSLNDLVTSLISSSKPKKAQLVLEWKLEKMSKRNESDPDLYINL 120

Query: 121 IRLCGELKNSSLAMRAFTVMEFQGVKPTVTAFNSLIEACISSHNMISALSIFEVMKNSIS 180
           IRLCG+L++S LAMR FTVMEFQGVKPTVTAFNSLIEACISSHNMI+A  IFEVMKNS +
Sbjct: 121 IRLCGKLRDSFLAMRVFTVMEFQGVKPTVTAFNSLIEACISSHNMITAFGIFEVMKNSKN 180

Query: 181 FKPNTDTFYYFISAFAKLHDVNSMQAWYSAKKAFEFSPDLRTYEALIHGSVKSKCFDFAV 240
           FKPNTDTFYYFIS F+KL DVNSMQAWYSAKKAFEFSPDLRTYEALIHGSVKSKCFDFAV
Sbjct: 181 FKPNTDTFYYFISEFSKLRDVNSMQAWYSAKKAFEFSPDLRTYEALIHGSVKSKCFDFAV 240

Query: 241 KCFEEMMLSDIVPNTIILENMLEGLCKRKNLDEVKKFLNVVLDNGWEINWNVVEKLIPVW 300
           KCFEEMMLSDIVPN IILENMLEGLCKRKN DEVKKFLNVVLDNGWEINWNVVEK IPVW
Sbjct: 241 KCFEEMMLSDIVPNAIILENMLEGLCKRKNFDEVKKFLNVVLDNGWEINWNVVEKFIPVW 300

Query: 301 FESGELETLDHL 313
           FESGELE +  +
Sbjct: 301 FESGELEGMKEI 312

[Close]

BLAST of PI0028261 vs. ExPASy TrEMBL
Match: A0A0A0LJI4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G889090 PE=4 SV=1)

HSP 1 Score: 538.9 bits (1387), Expect = 1.5e-149
Identity = 277/312 (88.78%), Postives = 289/312 (92.63%), Query Frame = 0


Query: 1   MASTGKRVLTLARSVSLSFPLQPQQPHYPLGFRRFFSTDPSISITNPLLLKLLQEPTSSV 60
           MASTGKRVL LAR+VSLS PLQ QQPHYPL FR FFSTDPSISITNPLLLKLLQEPTSSV
Sbjct: 1   MASTGKRVLALARNVSLSVPLQSQQPHYPLIFRGFFSTDPSISITNPLLLKLLQEPTSSV 60

Query: 61  KSVLDSQENGFLSSSPLSLNALVTSLISSSMPKKAQLVLEWKLEKMSKENKRDTDLYINL 120
           KSVLDSQENGFL SS LSLNALVTSLISSSM KKAQLVLEWKLE MSK+N+RD D YINL
Sbjct: 61  KSVLDSQENGFLCSSRLSLNALVTSLISSSMLKKAQLVLEWKLENMSKKNERDLDFYINL 120

Query: 121 IRLCGELKNSSLAMRAFTVMEFQGVKPTVTAFNSLIEACISSHNMISALSIFEVMKNSIS 180
           I LCG+L+NSSLAMR F VMEFQGVKPTVTAFNSLIEACISS+NMI+A SIFEVMKNS +
Sbjct: 121 ICLCGKLRNSSLAMRVFNVMEFQGVKPTVTAFNSLIEACISSNNMITAFSIFEVMKNSKN 180

Query: 181 FKPNTDTFYYFISAFAKLHDVNSMQAWYSAKKAFEFSPDLRTYEALIHGSVKSKCFDFAV 240
           FKPNTDTFYYFISAFAKLHDVNSMQAWYSAKKAFEFSPDLRTYEALIHGSVKS CFDF V
Sbjct: 181 FKPNTDTFYYFISAFAKLHDVNSMQAWYSAKKAFEFSPDLRTYEALIHGSVKSNCFDFGV 240

Query: 241 KCFEEMMLSDIVPNTIILENMLEGLCKRKNLDEVKKFLNVVLDNGWEINWNVVEKLIPVW 300
           KCFEEM+LSDIVPNTIILENMLEGLCKRKN DEVKKFLNVVLDNGWEI+WNVVEK IPVW
Sbjct: 241 KCFEEMILSDIVPNTIILENMLEGLCKRKNFDEVKKFLNVVLDNGWEIDWNVVEKFIPVW 300

Query: 301 FESGELETLDHL 313
           FESGELE +  +
Sbjct: 301 FESGELEGMKEI 312

[Close]

BLAST of PI0028261 vs. ExPASy TrEMBL
Match: A0A6J1II25 (pentatricopeptide repeat-containing protein At2g37230-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111476476 PE=4 SV=1)

HSP 1 Score: 462.2 bits (1188), Expect = 1.7e-126
Identity = 236/321 (73.52%), Postives = 265/321 (82.55%), Query Frame = 0


Query: 1   MASTGKRVLTLARSVSLSFPLQPQQPHYPLGFRRFFSTDPSISITNPLLLKLLQEPTSSV 60
           MA    RVL LA+  S   PL+ Q+ HY    RRF STDPS SI NPL+L+L+QEP+SSV
Sbjct: 1   MAVARNRVLALAKGGSSRIPLRLQEAHYRCICRRFVSTDPSNSILNPLVLRLIQEPSSSV 60

Query: 61  KSVLDSQENGFLSSSPLSLNALVTSLISSSMPKKAQLVLEWKLEKMSKENKRDTDLYINL 120
           KSVLDS EN FL SS LS  ALVTSLISSS PKKAQL LEW+LEKM+KEN+RD D YI+L
Sbjct: 61  KSVLDSPENDFLGSSRLSWKALVTSLISSSSPKKAQLALEWRLEKMNKENERDPDFYIDL 120

Query: 121 IRLCGELKNSSLAMRAFTVMEFQGVKPTVTAFNSLIEACISSHNMISALSIFEVMKNSIS 180
           IRLCGEL+N  LAMR FT MEFQGVKPTVTAFNSLIE CISSHNMI+A S+FE+MKNS S
Sbjct: 121 IRLCGELQNVPLAMRVFTAMEFQGVKPTVTAFNSLIEVCISSHNMITAFSMFEIMKNSES 180

Query: 181 FKPNTDTFYYFISAFAKLHDVNSMQAWYSAKKAFEFSPDLRTYEALIHGSVKSKCFDFAV 240
           FKPN DTF+YFISAFAKL DVNSM+AWYSAK+AFEFS DLRTYEALIHGSV SKCFDFAV
Sbjct: 181 FKPNADTFFYFISAFAKLRDVNSMEAWYSAKRAFEFSADLRTYEALIHGSVNSKCFDFAV 240

Query: 241 KCFEEMMLSDIVPNTIILENMLEGLCKRKNLDEVKKFLNVVLDNGWEINWNVVEKLIPVW 300
           +CF+EMMLS IVPN IIL+NMLEG CKRK+LDE+KKFL VVLD GWEI WNVVEK IP+W
Sbjct: 241 RCFDEMMLSGIVPNAIILDNMLEGFCKRKDLDELKKFLTVVLDKGWEIKWNVVEKFIPIW 300

Query: 301 FESGELETLDHLFLHYKFASK 322
           FESGE E ++ +      A++
Sbjct: 301 FESGEAEGMEEILTKLNEAAR 321

[Close]

BLAST of PI0028261 vs. ExPASy TrEMBL
Match: A0A6J1FC94 (pentatricopeptide repeat-containing protein At1g63080, mitochondrial-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111442788 PE=4 SV=1)

HSP 1 Score: 458.4 bits (1178), Expect = 2.5e-125
Identity = 234/304 (76.97%), Postives = 258/304 (84.87%), Query Frame = 0


Query: 1   MASTGKRVLTLARSVSLSFPLQPQQPHYPLGFRRFFSTDPSISITNPLLLKLLQEPTSSV 60
           MA    RVL LA+  S   PL+ Q+PHY    RRF STDPS SI NPL+L+L+QEP+SSV
Sbjct: 1   MAVARNRVLALAKGGSSRVPLRLQEPHYRCICRRFVSTDPSNSILNPLVLRLIQEPSSSV 60

Query: 61  KSVLDSQENGFLSSSPLSLNALVTSLISSSMPKKAQLVLEWKLEKMSKENKRDTDLYINL 120
           KSVLDS EN FL SS LS  ALVTSLISSS PKKAQL LEW+LEKMSKEN+RD D YI+L
Sbjct: 61  KSVLDSPENAFLGSSWLSWKALVTSLISSSSPKKAQLALEWRLEKMSKENERDPDFYIDL 120

Query: 121 IRLCGELKNSSLAMRAFTVMEFQGVKPTVTAFNSLIEACISSHNMISALSIFEVMKNSIS 180
           IRLCGEL+N  LAMR FT MEFQGV+PTVTAFNSLIE CISSHNMI+A S+FE+MKNS S
Sbjct: 121 IRLCGELQNVPLAMRVFTAMEFQGVQPTVTAFNSLIEVCISSHNMITAFSMFEIMKNSES 180

Query: 181 FKPNTDTFYYFISAFAKLHDVNSMQAWYSAKKAFEFSPDLRTYEALIHGSVKSKCFDFAV 240
            KPN DTF+YFISAFAK HDVNSM+AWYSA +AFEFS DLRTYEALIHGSVKSKCFDFAV
Sbjct: 181 SKPNADTFFYFISAFAKRHDVNSMEAWYSANRAFEFSADLRTYEALIHGSVKSKCFDFAV 240

Query: 241 KCFEEMMLSDIVPNTIILENMLEGLCKRKNLDEVKKFLNVVLDNGWEINWNVVEKLIPVW 300
           +CF+EMMLS IVPN IIL+NMLEG CKRK+LDE+KKFL VVLD GWEINWNVVEK IP+W
Sbjct: 241 RCFDEMMLSGIVPNAIILDNMLEGFCKRKDLDELKKFLTVVLDKGWEINWNVVEKFIPIW 300

Query: 301 FESG 305
           FESG
Sbjct: 301 FESG 304

[Close]

BLAST of PI0028261 vs. NCBI nr
Match: XP_008466249.1 (PREDICTED: pentatricopeptide repeat-containing protein At3g09060-like [Cucumis melo] >KAA0038720.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] >TYK31332.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 540.4 bits (1391), Expect = 1.0e-149
Identity = 277/312 (88.78%), Postives = 287/312 (91.99%), Query Frame = 0


Query: 1   MASTGKRVLTLARSVSLSFPLQPQQPHYPLGFRRFFSTDPSISITNPLLLKLLQEPTSSV 60
           MASTGKRVLTLAR+VS S PLQ QQPHYPL FR FFSTDPSISITNPLLLKLLQEPTSSV
Sbjct: 1   MASTGKRVLTLARNVSFSIPLQSQQPHYPLIFRGFFSTDPSISITNPLLLKLLQEPTSSV 60

Query: 61  KSVLDSQENGFLSSSPLSLNALVTSLISSSMPKKAQLVLEWKLEKMSKENKRDTDLYINL 120
           KSVLDSQENGFL SS LSLN LVTSLISSS PKKAQLVLEWKLEKMSK N+ D DLYINL
Sbjct: 61  KSVLDSQENGFLCSSRLSLNDLVTSLISSSKPKKAQLVLEWKLEKMSKRNESDPDLYINL 120

Query: 121 IRLCGELKNSSLAMRAFTVMEFQGVKPTVTAFNSLIEACISSHNMISALSIFEVMKNSIS 180
           IRLCG+L++S LAMR FTVMEFQGVKPTVTAFNSLIEACISSHNMI+A  IFEVMKNS +
Sbjct: 121 IRLCGKLRDSFLAMRVFTVMEFQGVKPTVTAFNSLIEACISSHNMITAFGIFEVMKNSKN 180

Query: 181 FKPNTDTFYYFISAFAKLHDVNSMQAWYSAKKAFEFSPDLRTYEALIHGSVKSKCFDFAV 240
           FKPNTDTFYYFIS F+KL DVNSMQAWYSAKKAFEFSPDLRTYEALIHGSVKSKCFDFAV
Sbjct: 181 FKPNTDTFYYFISEFSKLRDVNSMQAWYSAKKAFEFSPDLRTYEALIHGSVKSKCFDFAV 240

Query: 241 KCFEEMMLSDIVPNTIILENMLEGLCKRKNLDEVKKFLNVVLDNGWEINWNVVEKLIPVW 300
           KCFEEMMLSDIVPN IILENMLEGLCKRKN DEVKKFLNVVLDNGWEINWNVVEK IPVW
Sbjct: 241 KCFEEMMLSDIVPNAIILENMLEGLCKRKNFDEVKKFLNVVLDNGWEINWNVVEKFIPVW 300

Query: 301 FESGELETLDHL 313
           FESGELE +  +
Sbjct: 301 FESGELEGMKEI 312

[Close]

BLAST of PI0028261 vs. NCBI nr
Match: XP_004136433.1 (pentatricopeptide repeat-containing protein At1g12775, mitochondrial [Cucumis sativus] >KGN60201.1 hypothetical protein Csa_002233 [Cucumis sativus])

HSP 1 Score: 538.9 bits (1387), Expect = 3.0e-149
Identity = 277/312 (88.78%), Postives = 289/312 (92.63%), Query Frame = 0


Query: 1   MASTGKRVLTLARSVSLSFPLQPQQPHYPLGFRRFFSTDPSISITNPLLLKLLQEPTSSV 60
           MASTGKRVL LAR+VSLS PLQ QQPHYPL FR FFSTDPSISITNPLLLKLLQEPTSSV
Sbjct: 1   MASTGKRVLALARNVSLSVPLQSQQPHYPLIFRGFFSTDPSISITNPLLLKLLQEPTSSV 60

Query: 61  KSVLDSQENGFLSSSPLSLNALVTSLISSSMPKKAQLVLEWKLEKMSKENKRDTDLYINL 120
           KSVLDSQENGFL SS LSLNALVTSLISSSM KKAQLVLEWKLE MSK+N+RD D YINL
Sbjct: 61  KSVLDSQENGFLCSSRLSLNALVTSLISSSMLKKAQLVLEWKLENMSKKNERDLDFYINL 120

Query: 121 IRLCGELKNSSLAMRAFTVMEFQGVKPTVTAFNSLIEACISSHNMISALSIFEVMKNSIS 180
           I LCG+L+NSSLAMR F VMEFQGVKPTVTAFNSLIEACISS+NMI+A SIFEVMKNS +
Sbjct: 121 ICLCGKLRNSSLAMRVFNVMEFQGVKPTVTAFNSLIEACISSNNMITAFSIFEVMKNSKN 180

Query: 181 FKPNTDTFYYFISAFAKLHDVNSMQAWYSAKKAFEFSPDLRTYEALIHGSVKSKCFDFAV 240
           FKPNTDTFYYFISAFAKLHDVNSMQAWYSAKKAFEFSPDLRTYEALIHGSVKS CFDF V
Sbjct: 181 FKPNTDTFYYFISAFAKLHDVNSMQAWYSAKKAFEFSPDLRTYEALIHGSVKSNCFDFGV 240

Query: 241 KCFEEMMLSDIVPNTIILENMLEGLCKRKNLDEVKKFLNVVLDNGWEINWNVVEKLIPVW 300
           KCFEEM+LSDIVPNTIILENMLEGLCKRKN DEVKKFLNVVLDNGWEI+WNVVEK IPVW
Sbjct: 241 KCFEEMILSDIVPNTIILENMLEGLCKRKNFDEVKKFLNVVLDNGWEIDWNVVEKFIPVW 300

Query: 301 FESGELETLDHL 313
           FESGELE +  +
Sbjct: 301 FESGELEGMKEI 312

[Close]

BLAST of PI0028261 vs. NCBI nr
Match: XP_038897030.1 (pentatricopeptide repeat-containing protein At1g12775, mitochondrial-like [Benincasa hispida])

HSP 1 Score: 503.8 bits (1296), Expect = 1.1e-138
Identity = 260/312 (83.33%), Postives = 275/312 (88.14%), Query Frame = 0


Query: 1   MASTGKRVLTLARSVSLSFPLQPQQPHYPLGFRRFFSTDPSISITNPLLLKLLQEPTSSV 60
           MA TGKRVL LA S S   PLQ QQ H+PL FRRF STDPS  I+NPLLL+LLQEPTSSV
Sbjct: 1   MALTGKRVLALAGSGSSRIPLQLQQAHFPLCFRRFVSTDPSNPISNPLLLRLLQEPTSSV 60

Query: 61  KSVLDSQENGFLSSSPLSLNALVTSLISSSMPKKAQLVLEWKLEKMSKENKRDTDLYINL 120
           KSVLDSQEN FL SS LS N LVTSLISSS PKKAQLVLEWKLEKMSKEN+RD D YI+L
Sbjct: 61  KSVLDSQENAFLCSSRLSFNTLVTSLISSSSPKKAQLVLEWKLEKMSKENERDPDFYIDL 120

Query: 121 IRLCGELKNSSLAMRAFTVMEFQGVKPTVTAFNSLIEACISSHNMISALSIFEVMKNSIS 180
           +RLCGEL+NS LAM  FTVMEFQGVKPTVTAFNSLIEACISS NMI+A SIFEVMKNS S
Sbjct: 121 MRLCGELQNSPLAMCVFTVMEFQGVKPTVTAFNSLIEACISSRNMITAFSIFEVMKNSES 180

Query: 181 FKPNTDTFYYFISAFAKLHDVNSMQAWYSAKKAFEFSPDLRTYEALIHGSVKSKCFDFAV 240
           +KPN+DTFY+FI  FAKLHDVNSMQAWYSAKKAF FSPDLRTYEALIHGSVKSKCFDFAV
Sbjct: 181 YKPNSDTFYHFIFVFAKLHDVNSMQAWYSAKKAFGFSPDLRTYEALIHGSVKSKCFDFAV 240

Query: 241 KCFEEMMLSDIVPNTIILENMLEGLCKRKNLDEVKKFLNVVLDNGWEINWNVVEKLIPVW 300
           KCFEEMMLS IVPNTIILENMLEGLCKRKNLDEVKKFLNVVLD GWEINWNVV K  P+W
Sbjct: 241 KCFEEMMLSGIVPNTIILENMLEGLCKRKNLDEVKKFLNVVLDKGWEINWNVVAKFFPIW 300

Query: 301 FESGELETLDHL 313
           FESGELE ++ +
Sbjct: 301 FESGELEGMEEI 312

[Close]

BLAST of PI0028261 vs. NCBI nr
Match: KAG7024539.1 (Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 468.4 bits (1204), Expect = 5.0e-128
Identity = 239/321 (74.45%), Postives = 267/321 (83.18%), Query Frame = 0


Query: 1   MASTGKRVLTLARSVSLSFPLQPQQPHYPLGFRRFFSTDPSISITNPLLLKLLQEPTSSV 60
           MA    RVL LA+  S   PL+ Q+PHY    RRF STDPS SI NPL+L+L+QEP+SSV
Sbjct: 1   MAVARNRVLALAKGGSSRVPLRLQEPHYRCICRRFVSTDPSNSILNPLVLRLIQEPSSSV 60

Query: 61  KSVLDSQENGFLSSSPLSLNALVTSLISSSMPKKAQLVLEWKLEKMSKENKRDTDLYINL 120
           KSVLDS EN FL SS LS  ALVTSLISSS PKKAQL LEW+LEKMSKEN+RD D YI+L
Sbjct: 61  KSVLDSPENAFLGSSRLSWKALVTSLISSSSPKKAQLALEWRLEKMSKENERDPDFYIDL 120

Query: 121 IRLCGELKNSSLAMRAFTVMEFQGVKPTVTAFNSLIEACISSHNMISALSIFEVMKNSIS 180
           IRLCGEL+N  LAMR FT MEFQGVKPTVTAFNSLIE CISSHNMI+A S+FE+MKNS S
Sbjct: 121 IRLCGELQNVPLAMRVFTAMEFQGVKPTVTAFNSLIEVCISSHNMITAFSMFEIMKNSES 180

Query: 181 FKPNTDTFYYFISAFAKLHDVNSMQAWYSAKKAFEFSPDLRTYEALIHGSVKSKCFDFAV 240
            KPN DTF+YFISAFAK HDVNSM+AWYSAK+AFEFS DLRTYEALIHGSVKSKCFDFAV
Sbjct: 181 SKPNADTFFYFISAFAKRHDVNSMEAWYSAKRAFEFSADLRTYEALIHGSVKSKCFDFAV 240

Query: 241 KCFEEMMLSDIVPNTIILENMLEGLCKRKNLDEVKKFLNVVLDNGWEINWNVVEKLIPVW 300
           +CF+EMMLS IVPN IIL+NMLEG CKRK+LDE+KKFL VVLD GWEINWNVVEK IP+W
Sbjct: 241 RCFDEMMLSGIVPNAIILDNMLEGFCKRKDLDELKKFLTVVLDKGWEINWNVVEKFIPIW 300

Query: 301 FESGELETLDHLFLHYKFASK 322
           FESGE E ++ +      A++
Sbjct: 301 FESGEAEGMEEILTKLNEAAR 321

[Close]

BLAST of PI0028261 vs. NCBI nr
Match: XP_022975914.1 (pentatricopeptide repeat-containing protein At2g37230-like isoform X1 [Cucurbita maxima] >XP_022975915.1 pentatricopeptide repeat-containing protein At2g37230-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 462.2 bits (1188), Expect = 3.6e-126
Identity = 236/321 (73.52%), Postives = 265/321 (82.55%), Query Frame = 0


Query: 1   MASTGKRVLTLARSVSLSFPLQPQQPHYPLGFRRFFSTDPSISITNPLLLKLLQEPTSSV 60
           MA    RVL LA+  S   PL+ Q+ HY    RRF STDPS SI NPL+L+L+QEP+SSV
Sbjct: 1   MAVARNRVLALAKGGSSRIPLRLQEAHYRCICRRFVSTDPSNSILNPLVLRLIQEPSSSV 60

Query: 61  KSVLDSQENGFLSSSPLSLNALVTSLISSSMPKKAQLVLEWKLEKMSKENKRDTDLYINL 120
           KSVLDS EN FL SS LS  ALVTSLISSS PKKAQL LEW+LEKM+KEN+RD D YI+L
Sbjct: 61  KSVLDSPENDFLGSSRLSWKALVTSLISSSSPKKAQLALEWRLEKMNKENERDPDFYIDL 120

Query: 121 IRLCGELKNSSLAMRAFTVMEFQGVKPTVTAFNSLIEACISSHNMISALSIFEVMKNSIS 180
           IRLCGEL+N  LAMR FT MEFQGVKPTVTAFNSLIE CISSHNMI+A S+FE+MKNS S
Sbjct: 121 IRLCGELQNVPLAMRVFTAMEFQGVKPTVTAFNSLIEVCISSHNMITAFSMFEIMKNSES 180

Query: 181 FKPNTDTFYYFISAFAKLHDVNSMQAWYSAKKAFEFSPDLRTYEALIHGSVKSKCFDFAV 240
           FKPN DTF+YFISAFAKL DVNSM+AWYSAK+AFEFS DLRTYEALIHGSV SKCFDFAV
Sbjct: 181 FKPNADTFFYFISAFAKLRDVNSMEAWYSAKRAFEFSADLRTYEALIHGSVNSKCFDFAV 240

Query: 241 KCFEEMMLSDIVPNTIILENMLEGLCKRKNLDEVKKFLNVVLDNGWEINWNVVEKLIPVW 300
           +CF+EMMLS IVPN IIL+NMLEG CKRK+LDE+KKFL VVLD GWEI WNVVEK IP+W
Sbjct: 241 RCFDEMMLSGIVPNAIILDNMLEGFCKRKDLDELKKFLTVVLDKGWEIKWNVVEKFIPIW 300

Query: 301 FESGELETLDHLFLHYKFASK 322
           FESGE E ++ +      A++
Sbjct: 301 FESGEAEGMEEILTKLNEAAR 321

[Close]

BLAST of PI0028261 vs. TAIR 10
Match: AT1G62930.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 81.6 bits (200), Expect = 1.2e-15
Identity = 61/231 (26.41%), Postives = 106/231 (45.89%), Query Frame = 0


Query: 87  ISSSMPKKAQLVLEWKLEKMSKENKRDTD--LYINLIRLCGELKNSSLAMRAFTVMEFQG 146
           + + + K+  + L   L K  ++ K + D  +Y  +I      KN + A+  FT M+ +G
Sbjct: 226 VVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKG 285

Query: 147 VKPTVTAFNSLIEACISSHNMISALS--IFEVMKNSISFKPNTDTFYYFISAFAKLHDVN 206
           ++P V  +NSLI  C+ ++   S  S  + ++++  I+  PN  TF   I AF K   + 
Sbjct: 286 IRPNVVTYNSLIR-CLCNYGRWSDASRLLSDMIERKIN--PNVVTFSALIDAFVKEGKLV 345

Query: 207 SMQAWYSAKKAFEFSPDLRTYEALIHGSVKSKCFDFAVKCFEEMMLSDIVPNTIILENML 266
             +  Y         PD+ TY +LI+G       D A   FE M+  D  PN +    ++
Sbjct: 346 EAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLI 405

Query: 267 EGLCKRKNLDEVKKFLNVVLDNGWEINWNVVEKLIPVWFESGELETLDHLF 314
           +G CK K ++E  +    +   G   N      LI   F++G+ +    +F
Sbjct: 406 KGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIF 453

[Close]

BLAST of PI0028261 vs. TAIR 10
Match: AT1G63130.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 78.2 bits (191), Expect = 1.4e-14
Identity = 64/237 (27.00%), Postives = 109/237 (45.99%), Query Frame = 0


Query: 82  LVT-SLISSSMPKKAQLVLEWKLEKMSKENKRDTD--LYINLIRLCGELKNSSLAMRAFT 141
           LVT  ++ + + K+  + L   L K  ++ K +    +Y  +I      KN + A+  FT
Sbjct: 221 LVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFT 280

Query: 142 VMEFQGVKPTVTAFNSLIEACISSHNMISALS--IFEVMKNSISFKPNTDTFYYFISAFA 201
            M+ +G++P V  +NSLI  C+ ++   S  S  + ++++  I+  PN  TF   I AF 
Sbjct: 281 EMDNKGIRPNVVTYNSLIR-CLCNYGRWSDASRLLSDMIERKIN--PNVVTFSALIDAFV 340

Query: 202 KLHDVNSMQAWYSAKKAFEFSPDLRTYEALIHGSVKSKCFDFAVKCFEEMMLSDIVPNTI 261
           K   +   +  Y         PD+ TY +LI+G       D A   FE M+  D  PN +
Sbjct: 341 KEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVV 400

Query: 262 ILENMLEGLCKRKNLDEVKKFLNVVLDNGWEINWNVVEKLIPVWFESGELETLDHLF 314
               +++G CK K +DE  +    +   G   N      LI  +F++ E +    +F
Sbjct: 401 TYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVF 454

[Close]

BLAST of PI0028261 vs. TAIR 10
Match: AT3G48810.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 75.1 bits (183), Expect = 1.2e-13
Identity = 54/234 (23.08%), Postives = 99/234 (42.31%), Query Frame = 0


Query: 80  NALVTSLISSSMPKKAQLVLEWKLEKMSKENKRDTDLYINLIRLCGELKNSSLAMRAFTV 139
           NAL+  L      K A  ++   +EK    N       IN++   G+++   LA    T 
Sbjct: 250 NALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIE---LAFSFLTQ 309

Query: 140 MEFQGVKPTVTAFNSLIEACISSHNMISALSIFEVMKNSISFKPNTDTFYYFISAFAKLH 199
           M  +G  P +   +SL++ C        AL ++  M      +PN   +   +  F    
Sbjct: 310 MLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHG 369

Query: 200 DVNSMQAWYSAKKAFEFSPDLRTYEALIHGSVKSKCFDFAVKCFEEMMLSDIVPNTIILE 259
           ++    + +S  +    SP++RTY +LI+G  K    D AV  + +M+ S   PN ++  
Sbjct: 370 NIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYT 429

Query: 260 NMLEGLCKRKNLDEVKKFLNVVLDNGWEINWNVVEKLIPVWFESGELETLDHLF 314
           NM+E LC+     E +  + ++       +       I    ++G L+  + +F
Sbjct: 430 NMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVF 480

[Close]

BLAST of PI0028261 vs. TAIR 10
Match: AT1G63400.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 72.8 bits (177), Expect = 5.7e-13
Identity = 59/238 (24.79%), Postives = 108/238 (45.38%), Query Frame = 0


Query: 80  NALVTSLISSSMPKKAQLVLEWKLEKMSKENKRDTD--LYINLIRLCGELKNSSLAMRAF 139
           N +   ++ + + K+  + L + L    +  K + +  +Y  +I    + ++   A+  F
Sbjct: 224 NLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLF 283

Query: 140 TVMEFQGVKPTVTAFNSLIEACISSHNMISALS--IFEVMKNSISFKPNTDTFYYFISAF 199
           T ME +GV+P V  ++SLI +C+ ++   S  S  + ++++  I+  PN  TF   I AF
Sbjct: 284 TEMENKGVRPNVITYSSLI-SCLCNYERWSDASRLLSDMIERKIN--PNVVTFNALIDAF 343

Query: 200 AKLHDVNSMQAWYSAKKAFEFSPDLRTYEALIHGSVKSKCFDFAVKCFEEMMLSDIVPNT 259
            K   +   +  Y         PD+ TY +LI+G       D A   FE M+  D  PN 
Sbjct: 344 VKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNV 403

Query: 260 IILENMLEGLCKRKNLDEVKKFLNVVLDNGWEINWNVVEKLIPVWFESGELETLDHLF 314
           +    ++ G CK K +DE  +    +   G   N      LI  +F++ + +    +F
Sbjct: 404 VTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVF 458

[Close]

BLAST of PI0028261 vs. TAIR 10
Match: AT1G63330.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 62.8 bits (151), Expect = 5.9e-10
Identity = 56/238 (23.53%), Postives = 104/238 (43.70%), Query Frame = 0


Query: 80  NALVTSLISSSMPKKAQLVLEWKLEKMSKENKRDTDLYI--NLIRLCGELKNSSLAMRAF 139
           N +   ++ + + K+  + L + L    +  K + D+ I   +I    + ++   A+  F
Sbjct: 149 NLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLF 208

Query: 140 TVMEFQGVKPTVTAFNSLIEACISSHNMISALSIFEVMKNSISFK--PNTDTFYYFISAF 199
             ME +G++P V  ++SLI +C+ S+   S  S  +++ + I  K  PN  TF   I AF
Sbjct: 209 KEMETKGIRPNVVTYSSLI-SCLCSYGRWSDAS--QLLSDMIEKKINPNLVTFNALIDAF 268

Query: 200 AKLHDVNSMQAWYSAKKAFEFSPDLRTYEALIHGSVKSKCFDFAVKCFEEMMLSDIVPNT 259
            K       +  +         PD+ TY +LI+G       D A + FE M+  D  P+ 
Sbjct: 269 VKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDL 328

Query: 260 IILENMLEGLCKRKNLDEVKKFLNVVLDNGWEINWNVVEKLIPVWFESGELETLDHLF 314
                +++G CK K +++  +    +   G   +      LI   F  G+ +    +F
Sbjct: 329 DTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVF 383

The following BLAST results are available for this feature:

BLAST of PI0028261 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LQ14	1.7e-14	26.41	Pentatricopeptide repeat-containing protein At1g62930, chloroplastic OS=Arabidop...	[more]
Q9CAN0	1.9e-13	27.00	Pentatricopeptide repeat-containing protein At1g63130, mitochondrial OS=Arabidop...	[more]
Q9M302	1.6e-12	23.08	Pentatricopeptide repeat-containing protein At3g48810 OS=Arabidopsis thaliana OX...	[more]
Q9SH26	8.0e-12	24.79	Pentatricopeptide repeat-containing protein At1g63400 OS=Arabidopsis thaliana OX...	[more]
Q9C8T7	8.3e-09	23.53	Pentatricopeptide repeat-containing protein At1g63330 OS=Arabidopsis thaliana OX...	[more]

BLAST of PI0028261 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3E5Z9	5.0e-150	88.78	Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A1S3CS56	5.0e-150	88.78	pentatricopeptide repeat-containing protein At3g09060-like OS=Cucumis melo OX=36...	[more]
A0A0A0LJI4	1.5e-149	88.78	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G889090 PE=4 SV=1	[more]
A0A6J1II25	1.7e-126	73.52	pentatricopeptide repeat-containing protein At2g37230-like isoform X1 OS=Cucurbi...	[more]
A0A6J1FC94	2.5e-125	76.97	pentatricopeptide repeat-containing protein At1g63080, mitochondrial-like isofor...	[more]

BLAST of PI0028261 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008466249.1	1.0e-149	88.78	PREDICTED: pentatricopeptide repeat-containing protein At3g09060-like [Cucumis m...	[more]
XP_004136433.1	3.0e-149	88.78	pentatricopeptide repeat-containing protein At1g12775, mitochondrial [Cucumis sa...	[more]
XP_038897030.1	1.1e-138	83.33	pentatricopeptide repeat-containing protein At1g12775, mitochondrial-like [Benin...	[more]
KAG7024539.1	5.0e-128	74.45	Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita a...	[more]
XP_022975914.1	3.6e-126	73.52	pentatricopeptide repeat-containing protein At2g37230-like isoform X1 [Cucurbita...	[more]

BLAST of PI0028261 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G62930.1	1.2e-15	26.41	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT1G63130.1	1.4e-14	27.00	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT3G48810.1	1.2e-13	23.08	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT1G63400.1	5.7e-13	24.79	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT1G63330.1	5.9e-10	23.53	Pentatricopeptide repeat (PPR) superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 118..311 e-value: 7.3E-34 score: 119.5
IPR002885	Pentatricopeptide repeat	PFAM	PF13812	PPR_3	coord: 115..159 e-value: 1.2E-7 score: 31.7
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 222..255 e-value: 8.3E-7 score: 26.8
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 222..249 e-value: 0.0057 score: 16.8
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 219..253 score: 9.930995
None	No IPR available	PANTHER	PTHR45613:SF360	PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN	coord: 35..312
None	No IPR available	PANTHER	PTHR45613	PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN	coord: 35..312

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0028261.1	PI0028261.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015031	protein transport
cellular_component	GO:0030117	membrane coat
molecular_function	GO:0005515	protein binding