PI0028217 (gene) Melon (PI 482460) v1

Overview


Name	PI0028217
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	E3 ubiquitin-protein ligase Topors
Location	chr11: 4349075 .. 4352394 (-)
RNA-Seq Expression	PI0028217
Synteny	PI0028217

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GCGAAAGTCATGAAGCCTTCGAGTTCGACCGGGGAACCGGCGCGAAAGCTCAACGGCGAAAACTTCATAACGAAGGTGATTTCGCCGGCGATTTGTGGAGAAACCTGCCCAATTTGCCTCAGAGAATTGGAGGATCGTACCGCCGCTGTGCTTACAACGTGTATCCATGCCTATTGCATAGGCTGTATTCGTAAATGGAGCAATTTGAAGCGAACTTGCCCTCTTTGTAACGCTCAATTCGATTCATGGTTCACCAAAATCAACCTCTCATCGCAAAGCTTCCGCAAAGAACGGTTGACAACCCCGAATTGTTCCGATAAGCTCAAGGTTGGAGTTGGATCTTCCCAGACAGACGCTCGCGGGTGTGTGTTTTCTGGTTTTGATACGTCTTTTTGGTTGTTGATTTTGTTTGCAAATGTACCTTTTCTACTTGAATCGAAGTTAGAAGTAAATATGGAACGTTGTTTTCTTGAGAACTGCTCTAGTTTGTTTTAATGGAGGGATAGATTTGAATATTGAACTTGGAACTATATGTGTTCCTCTTACTTTGATGTAGGATTCTTCAGAGCACGAGGAATGAATTAAATAGAGAAAGACGGTCGGAAAGATCACTTACATGGCGGCGATCGTTTGGACGGCGAGGGCCGGAATCTTTGCCTGTTGATGTTGTTGTCCGGCGAAAACTTCAGTGGCGTGCTAGGTAACTTCAAGGTTTATTTCTCTGGTTGGGTTTTACGCCTCTCACTTTTTTCTCCATGTTTTAGAGTTAGAGCTTGAATATTTTTGCTAATATGTTGTTGGGTTTTGACAAAGCATATACAACCGATGTATACAAGCTGTTCCATCTTCGGTCAGATCATTTTTAGAAATGGTATGTATTTTAATACTCAACCAATTCAACTATACTCAAGTTGTCAACATTGCGTACTTGAACAATTGATAATTAATGGTTTAAATTTCTCTCTTTGATTCCATAAAAAGATGTTGCAAAGTTGTCTTGGCTGCTAGTGCAATTCTGTTATTTAGTTCTTCATATGCTGTGTTTGTGATTGCGAATTTGCGAGCTGTGCAGAACATATTAGGAAGTCGTGGAGGCAAAGAAGTGATTCTAGAGAGGATTAAACCATGGATTCAAAGAGAGCTACAGGTCATCCTCGAGGACCCTGATCCAACCATAATTGTTCATCTGGTTACCTCACTATTTGTGGCAAGACTTGAAGCTACTTCCTCACTGCTTAATGCGGAAGATGACTTTCTTTCACCTTTGCGTCCCTTCCTCTTCGAAAAGACTGATTTATTTTGGCATGAACTAAGGTACATGACTCATGAACTGTAATAATCTAAATCCTCGTGGTTGGTTTCCTTGATGCATCTAAAATTTGAAATGAGTGTAAGATTTCTTGAGCGTCGGAGTTCCAAGCTCCAGTAAACCAGAGAATGCAAGAACATTATATATTGATATCTGCTCCTAAGCTTCACAACCCATTTGATTACAACTAAATTTTCAATCTTACTCTCACTTTCAGTATGTTTGTGTACGGATGTGCCATTTGTTCCCAGCTCAACTCTGCCACTAGCTCAACGAAAATATTATGTAATTATCCCTCACCCAAACTATCCTTGTCTAGTAACTCGTTGAAGCAACCTTCTTGTACCTAAATTAAAACACTGCAGGGATGGATTTTGACAGGATTGGAGAATTGAAATAGGAATTACATTGATGTCTTGCTAAATGAAATAAATCATCATGGTTTGATCTAGTGGTAAAAAAGGACACAGTCTCAATAACTAATTAAGAGGTCACGGATTCAATCCTACGAGTTTTCTTGACACCCAAATGTTGTAGAGTCAGGTGGGTTCCGTGAGATTAATTGACGTGCGCGTAAGCTGACCCAGACATTCACAGATATAAAAAAAAAAAAAAAAAAGAAACTACTAAATAAGAAAGTGCAAATCTGCCAAGCCTTTCAACTTTGAGGCCACTTGAGTGAACTGATGTCTAAACAACTAAATCACCGCTGGCCTTCATCCCAATAGAAATACAGTGGTTGTATACATAAGAAATTAAAATCCCATGAGTTCTTTAACATCAAAATAGCCCCTTTTTTATCCTAATGGTCTTCCAAACATAGTCCTTGCTACTTCACTCTATCATAAAGGTCCCATGAGTAATTGTGTTTGTGTTTGTGTTTGTTTCTTCATCACAATGTCTGGCTGCAATTTTGTTGGAACCCCTTTCTTTAGTGGAGCTTTTATGGACTTGGTATTTTTGTATACCCTTGTATTCTTCATTTTTCTCAAAGCAGTTTTATCGAATATATGTATGTAACCCTTCTACTCGGCTGCAATTTTTGTGTTCGTTATTTTTCTGCTACCATTTTTATTTGAAAAACTTTCTATCCCAGATGTTTTGCAGGAAGTCCATTACGGATGGAAGAATATGATTCGGTGGTTGAATATAGAACAGTGGGTTAAGTGAAGAGAAGAATCTGTTTGAAGAAAATATTTTGTACTCATTACTTCTCCATTGTTGGTTGCTGGTTATTCTTTAAATGAATTGACATTAATATTAAGGAAAGATTTTGCTAGAAAGGGAGGAGAGTTGTGGCTTGGATTCAACTTCCTTCTTACCTCCTGAATGAAAGAACCATTATATGAGACTAAGAAATCTTTGTGCTGCCAAGGATTTTAAAGAGGTATGCAGTTTGGATATGCTAGTTCGATCCAACCCATATGTCGCTTAACGTTTATAACTAAGTATTGTCGTCCTTCGATTTGAAGATCATCTCAAGAAGAGAAGATTCTTTACGAGGAAACATTATGTATTGGTTTCTCACACCGTCCGTGAAGGTATTCCTAACAACAAATTGATTATAGTTGTTGCTCGATCAGGTAGGTGTTGTTGCTCTGTCAGGGTCATTCTTTTCGAGCATGAACTGGAAGAGAGAAACATGAAGACAAAGAGTTTCGGACCCACATAAGGTTCTGAAGATGGTATCTGGTTTGGAGGTAGCAATATGATGAGCAATATGATGGATCATTACAGTGGAAGTAGAACACAGTTGGGAGGATTGGAAATGGAATTTTTGTAGAATAATAAGCAATTTTTCCAATGTGGCACTTAGAGCATGTTGTAACAAGCTAAAAAGAGTTTAGTTCATCTGGTAAATGTATGTTCATGTATTGAGAACCAAGAAGTTATACAGGTTCAATTCTCCCACCCCAAACTTCTATTAAAAAAGAGCATGTTGTAACTACTTTCTTGAGTGGTTAGAAAAAAAAACAGCACCATTTAAATAATCAGAACGTTATTTCAAGCA

mRNA sequence

GCGAAAGTCATGAAGCCTTCGAGTTCGACCGGGGAACCGGCGCGAAAGCTCAACGGCGAAAACTTCATAACGAAGGTGATTTCGCCGGCGATTTGTGGAGAAACCTGCCCAATTTGCCTCAGAGAATTGGAGGATCGTACCGCCGCTGTGCTTACAACGTGTATCCATGCCTATTGCATAGGCTGTATTCGTAAATGGAGCAATTTGAAGCGAACTTGCCCTCTTTGTAACGCTCAATTCGATTCATGGTTCACCAAAATCAACCTCTCATCGCAAAGCTTCCGCAAAGAACGGTTGACAACCCCGAATTGTTCCGATAAGCTCAAGGTTGGAGTTGGATCTTCCCAGACAGACGCTCGCGGGATTCTTCAGAGCACGAGGAATGAATTAAATAGAGAAAGACGGTCGGAAAGATCACTTACATGGCGGCGATCGTTTGGACGGCGAGGGCCGGAATCTTTGCCTGTTGATGTTGTTGTCCGGCGAAAACTTCAGTGGCGTGCTAGCATATACAACCGATGTATACAAGCTGTTCCATCTTCGGTCAGATCATTTTTAGAAATGAACATATTAGGAAGTCGTGGAGGCAAAGAAGTGATTCTAGAGAGGATTAAACCATGGATTCAAAGAGAGCTACAGGTCATCCTCGAGGACCCTGATCCAACCATAATTGTTCATCTGGTTACCTCACTATTTGTGGCAAGACTTGAAGCTACTTCCTCACTGCTTAATGCGGAAGATGACTTTCTTTCACCTTTGCGTCCCTTCCTCTTCGAAAAGACTGATTTATTTTGGCATGAACTAAGATGTTTTGCAGGAAGTCCATTACGGATGGAAGAATATGATTCGGTGGTTGAATATAGAACAGTGGGTTAAGTGAAGAGAAGAATCTGTTTGAAGAAAATATTTTGTACTCATTACTTCTCCATTGTTGGTTGCTGGTTATTCTTTAAATGAATTGACATTAATATTAAGGAAAGATTTTGCTAGAAAGGGAGGAGAGTTGTGGCTTGGATTCAACTTCCTTCTTACCTCCTGAATGAAAGAACCATTATATGAGACTAAGAAATCTTTGTGCTGCCAAGGATTTTAAAGAGGTATGCAGTTTGGATATGCTAGTTCGATCCAACCCATATGTCGCTTAACGTTTATAACTAAGTATTGTCGTCCTTCGATTTGAAGATCATCTCAAGAAGAGAAGATTCTTTACGAGGAAACATTATGTATTGGTTTCTCACACCGTCCGTGAAGGTATTCCTAACAACAAATTGATTATAGTTGTTGCTCGATCAGGTAGGTGTTGTTGCTCTGTCAGGGTCATTCTTTTCGAGCATGAACTGGAAGAGAGAAACATGAAGACAAAGAGTTTCGGACCCACATAAGGTTCTGAAGATGGTATCTGGTTTGGAGGTAGCAATATGATGAGCAATATGATGGATCATTACAGTGGAAGTAGAACACAGTTGGGAGGATTGGAAATGGAATTTTTGTAGAATAATAAGCAATTTTTCCAATGTGGCACTTAGAGCATGTTGTAACAAGCTAAAAAGAGTTTAGTTCATCTGGTAAATGTATGTTCATGTATTGAGAACCAAGAAGTTATACAGGTTCAATTCTCCCACCCCAAACTTCTATTAAAAAAGAGCATGTTGTAACTACTTTCTTGAGTGGTTAGAAAAAAAAACAGCACCATTTAAATAATCAGAACGTTATTTCAAGCA

Coding sequence (CDS)

ATGAAGCCTTCGAGTTCGACCGGGGAACCGGCGCGAAAGCTCAACGGCGAAAACTTCATAACGAAGGTGATTTCGCCGGCGATTTGTGGAGAAACCTGCCCAATTTGCCTCAGAGAATTGGAGGATCGTACCGCCGCTGTGCTTACAACGTGTATCCATGCCTATTGCATAGGCTGTATTCGTAAATGGAGCAATTTGAAGCGAACTTGCCCTCTTTGTAACGCTCAATTCGATTCATGGTTCACCAAAATCAACCTCTCATCGCAAAGCTTCCGCAAAGAACGGTTGACAACCCCGAATTGTTCCGATAAGCTCAAGGTTGGAGTTGGATCTTCCCAGACAGACGCTCGCGGGATTCTTCAGAGCACGAGGAATGAATTAAATAGAGAAAGACGGTCGGAAAGATCACTTACATGGCGGCGATCGTTTGGACGGCGAGGGCCGGAATCTTTGCCTGTTGATGTTGTTGTCCGGCGAAAACTTCAGTGGCGTGCTAGCATATACAACCGATGTATACAAGCTGTTCCATCTTCGGTCAGATCATTTTTAGAAATGAACATATTAGGAAGTCGTGGAGGCAAAGAAGTGATTCTAGAGAGGATTAAACCATGGATTCAAAGAGAGCTACAGGTCATCCTCGAGGACCCTGATCCAACCATAATTGTTCATCTGGTTACCTCACTATTTGTGGCAAGACTTGAAGCTACTTCCTCACTGCTTAATGCGGAAGATGACTTTCTTTCACCTTTGCGTCCCTTCCTCTTCGAAAAGACTGATTTATTTTGGCATGAACTAAGATGTTTTGCAGGAAGTCCATTACGGATGGAAGAATATGATTCGGTGGTTGAATATAGAACAGTGGGTTAA

Protein sequence

MKPSSSTGEPARKLNGENFITKVISPAICGETCPICLRELEDRTAAVLTTCIHAYCIGCIRKWSNLKRTCPLCNAQFDSWFTKINLSSQSFRKERLTTPNCSDKLKVGVGSSQTDARGILQSTRNELNRERRSERSLTWRRSFGRRGPESLPVDVVVRRKLQWRASIYNRCIQAVPSSVRSFLEMNILGSRGGKEVILERIKPWIQRELQVILEDPDPTIIVHLVTSLFVARLEATSSLLNAEDDFLSPLRPFLFEKTDLFWHELRCFAGSPLRMEEYDSVVEYRTVG

Homology

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BLAST of PI0028217 vs. ExPASy Swiss-Prot
Match: Q9NS56 (E3 ubiquitin-protein ligase Topors OS=Homo sapiens OX=9606 GN=TOPORS PE=1 SV=1)

HSP 1 Score: 80.9 bits (198), Expect = 2.6e-14
Identity = 83/294 (28.23%), Postives = 119/294 (40.48%), Query Frame = 0


Query: 33  CPICLRELEDRTAAVLTTCIHAYCIGCIRKWSNLKRTCPLCNAQFDSWFTKINLSSQSFR 92
           CPICL   ++   + L  C+H +C  C+++WS  K  CPLC   FDS F  +   ++   
Sbjct: 103 CPICLDRFDN--VSYLDRCLHKFCFRCVQEWSKNKAECPLCKQPFDSIFHSVR--AEDDF 162

Query: 93  KERLTTPNCSDKLKVGVGSSQTDARGILQSTRNELNRERR----------SERSLTWRRS 152
           KE +  P+ +       GS  T  R      R  L RER           + R+ T   S
Sbjct: 163 KEYVLRPSYN-------GSFVTPDRRF--RYRTTLTRERNASVYSPSGPVNRRTTTPPDS 222

Query: 153 ---FGRRGPESLPVDVVVRRKLQWRASIYNRCIQAVPSSVRSFLEMNILGSR-------- 212
              F   G  + P DV + + +  R     R   A   S+R   E +I+  R        
Sbjct: 223 GVLFEGLGISTRPRDVEIPQFM--RQIAVRRPTTADERSLRKIQEQDIINFRRTLYRAGA 282

Query: 213 -------GGK------------EVILERIKPWIQRELQVIL--EDPDPTIIVHLVTSLFV 272
                  GG+               L R+ PW++REL V+         I+ H++ S  V
Sbjct: 283 RVRNIEDGGRYRDISAEFFRRNPACLHRLVPWLKRELTVLFGAHGSLVNIVQHIIMS-NV 342

Query: 273 ARLEATSSLLNAEDDFLSPLRPFLFEKTDLFWHELRCFAGSPLRMEEYDSVVEY 285
            R +  S        F+S LRPFL  +T+ F HE   FA SP  M  +D    Y
Sbjct: 343 TRYDLESQA------FVSDLRPFLLNRTEHFIHEFISFARSPFNMAAFDQHANY 374

[Close]

BLAST of PI0028217 vs. ExPASy Swiss-Prot
Match: Q80Z37 (E3 ubiquitin-protein ligase Topors OS=Mus musculus OX=10090 GN=Topors PE=1 SV=1)

HSP 1 Score: 78.2 bits (191), Expect = 1.7e-13
Identity = 76/285 (26.67%), Postives = 114/285 (40.00%), Query Frame = 0


Query: 33  CPICLRELEDRTAAVLTTCIHAYCIGCIRKWSNLKRTCPLCNAQFDSWFTKI-------- 92
           CPICL   ++   + L  C+H +C  C+++WS  K  CPLC   FDS F  +        
Sbjct: 104 CPICLDRFDN--VSYLDRCLHKFCFRCVQEWSKNKAECPLCKQPFDSIFHSVRAEDDFKE 163

Query: 93  ---------NLSSQSFRKERLTTPNCSDKLKVGVGSSQTDAR--------GILQSTRNEL 152
                    + ++   R+ R  T    ++       S T +R        G+L       
Sbjct: 164 YVLRPSYNGSFTNPEVRRFRYRTTMTRERSASLYSPSSTVSRRTTTPPDSGVLFEGLGIS 223

Query: 153 NRERRSERSLTWRRSFGRRGPESLPVDVVVRRKLQWRASI-YNRCIQAVPSSVRSFLEMN 212
            R R  +    + R    RGP +   D    RK+Q +  I + R +      VRS  +  
Sbjct: 224 TRPRDVDIP-QFMRQMALRGPTT--TDERSLRKIQEQDIINFRRTLYRAGVRVRSIEDGG 283

Query: 213 ILGSRGGK-----EVILERIKPWIQRELQVIL--EDPDPTIIVHLVTSLFVARLEATSSL 272
                  +        L R+ PW++REL V+         I+ H++ S  V R +  S  
Sbjct: 284 RYRDISAEFFRRNPACLHRLVPWLKRELTVLFGAHGSLVNIVQHIIMS-NVTRYDLESQA 343

Query: 273 LNAEDDFLSPLRPFLFEKTDLFWHELRCFAGSPLRMEEYDSVVEY 285
                 F+S LRPFL  +T+ F HE   FA SP  M  +D    Y
Sbjct: 344 ------FVSDLRPFLLNRTEHFIHEFISFARSPFNMAAFDQHANY 376

[Close]

BLAST of PI0028217 vs. ExPASy Swiss-Prot
Match: P08393 (E3 ubiquitin-protein ligase ICP0 OS=Human herpesvirus 1 (strain 17) OX=10299 GN=ICP0 PE=1 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 2.6e-06
Identity = 24/74 (32.43%), Postives = 35/74 (47.30%), Query Frame = 0


Query: 3   PSSSTGEPARKLNGENFITKVISPAICGETCPICLRELEDRTAAVLTTCIHAYCIGCIRK 62
           P S  G P R+  G +           G+ C +C  E+          C+H +CI C++ 
Sbjct: 96  PGSCGGAPPREDGGSDE----------GDVCAVCTDEIAPHLRCDTFPCMHRFCIPCMKT 155

Query: 63  WSNLKRTCPLCNAQ 77
           W  L+ TCPLCNA+
Sbjct: 156 WMQLRNTCPLCNAK 159

[Close]

BLAST of PI0028217 vs. ExPASy Swiss-Prot
Match: P28284 (E3 ubiquitin-protein ligase ICP0 OS=Human herpesvirus 2 (strain HG52) OX=10315 GN=RL2 PE=1 SV=1)

HSP 1 Score: 48.9 bits (115), Expect = 1.1e-04
Identity = 17/45 (37.78%), Postives = 25/45 (55.56%), Query Frame = 0


Query: 30  GETCPICLRELEDRTAAVLTTCIHAYCIGCIRKWSNLKRTCPLCN 75
           G+ C +C  E+          C+H +CI C++ W  L+ TCPLCN
Sbjct: 123 GDVCAVCTDEIAPPLRCQSFPCLHPFCIPCMKTWIPLRNTCPLCN 167

[Close]

BLAST of PI0028217 vs. ExPASy Swiss-Prot
Match: Q5BIY5 (RING finger protein 145 OS=Xenopus laevis OX=8355 GN=rnf145 PE=2 SV=1)

HSP 1 Score: 48.9 bits (115), Expect = 1.1e-04
Identity = 20/49 (40.82%), Postives = 30/49 (61.22%), Query Frame = 0


Query: 31  ETCPICLRELEDRTAAVLTTCIHAYCIGCIRKWSNLKRTCPLCNAQFDS 80
           + C IC    +D  +AV+T C H +  GC++KW  ++ TCPLC+ Q  S
Sbjct: 535 DICSIC---YQDMNSAVITPCSHFFHPGCLKKWLYVQETCPLCHCQLKS 580

[Close]

BLAST of PI0028217 vs. ExPASy TrEMBL
Match: A0A1S3C7X8 (E3 ubiquitin-protein ligase Topors OS=Cucumis melo OX=3656 GN=LOC103497872 PE=4 SV=1)

HSP 1 Score: 558.5 bits (1438), Expect = 1.6e-155
Identity = 275/288 (95.49%), Postives = 280/288 (97.22%), Query Frame = 0


Query: 1   MKPSSSTGEPARKLNGENFITKVISPAICGETCPICLRELEDRTAAVLTTCIHAYCIGCI 60
           MKPSSST EPARKLNGENFITKVISPAICGETCPICLRELEDRTAAVLTTCIHAYCIGCI
Sbjct: 1   MKPSSSTREPARKLNGENFITKVISPAICGETCPICLRELEDRTAAVLTTCIHAYCIGCI 60

Query: 61  RKWSNLKRTCPLCNAQFDSWFTKINLSSQSFRKERLTTPNCSDKLKVGVGSSQTDARGIL 120
           RKWSNLKRTCPLCNAQFDSWFTKINLSSQSFRKERL T NCS+KLKVGVGSSQTDARGIL
Sbjct: 61  RKWSNLKRTCPLCNAQFDSWFTKINLSSQSFRKERLKTSNCSEKLKVGVGSSQTDARGIL 120

Query: 121 QSTRNELNRERRSERSLTWRRSFGRRGPESLPVDVVVRRKLQWRASIYNRCIQAVPSSVR 180
           QSTR ELNRERRSERSLTWRRSFGRRGP+SLP DVVVRRKLQWRASIYNRCIQAVPSSVR
Sbjct: 121 QSTRYELNRERRSERSLTWRRSFGRRGPDSLPADVVVRRKLQWRASIYNRCIQAVPSSVR 180

Query: 181 SFLEMNILGSRGGKEVILERIKPWIQRELQVILEDPDPTIIVHLVTSLFVARLEATSSLL 240
           S LE+NILG+RGGKEVILERIKPWIQRELQVILEDPDPTIIVHLV SLFVARLEATSS L
Sbjct: 181 SCLELNILGNRGGKEVILERIKPWIQRELQVILEDPDPTIIVHLVISLFVARLEATSSQL 240

Query: 241 NAEDDFLSPLRPFLFEKTDLFWHELRCFAGSPLRMEEYDSVVEYRTVG 289
           NAEDDFLSPLRPFLFEKTDLFWHELRCFAGSPLRMEEYDSVVEYR+VG
Sbjct: 241 NAEDDFLSPLRPFLFEKTDLFWHELRCFAGSPLRMEEYDSVVEYRSVG 288

[Close]

BLAST of PI0028217 vs. ExPASy TrEMBL
Match: A0A0A0KCD1 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G198260 PE=4 SV=1)

HSP 1 Score: 553.5 bits (1425), Expect = 5.1e-154
Identity = 273/288 (94.79%), Postives = 277/288 (96.18%), Query Frame = 0


Query: 1   MKPSSSTGEPARKLNGENFITKVISPAICGETCPICLRELEDRTAAVLTTCIHAYCIGCI 60
           MK SSST EPARKLNGENFITKVISPAICGETCPICLRELEDRTAAVLTTCIHAYCI CI
Sbjct: 51  MKRSSSTREPARKLNGENFITKVISPAICGETCPICLRELEDRTAAVLTTCIHAYCISCI 110

Query: 61  RKWSNLKRTCPLCNAQFDSWFTKINLSSQSFRKERLTTPNCSDKLKVGVGSSQTDARGIL 120
           RKWSNLKRTCPLCNAQFDSWFTKINLSSQSFRKERLTT NCSDKLKVGVGSSQ DARGIL
Sbjct: 111 RKWSNLKRTCPLCNAQFDSWFTKINLSSQSFRKERLTTSNCSDKLKVGVGSSQIDARGIL 170

Query: 121 QSTRNELNRERRSERSLTWRRSFGRRGPESLPVDVVVRRKLQWRASIYNRCIQAVPSSVR 180
           QSTR ELNRERRSERSLTWRRSFGRRGP+SLP DVVVRRK QWRASIYNRCIQAVPSSVR
Sbjct: 171 QSTRYELNRERRSERSLTWRRSFGRRGPDSLPADVVVRRKRQWRASIYNRCIQAVPSSVR 230

Query: 181 SFLEMNILGSRGGKEVILERIKPWIQRELQVILEDPDPTIIVHLVTSLFVARLEATSSLL 240
           S LE+N+LGSRGGKEVILERIKPWIQRELQVILEDPDPTIIVHLV SLFVAR+EATSS L
Sbjct: 231 SCLELNVLGSRGGKEVILERIKPWIQRELQVILEDPDPTIIVHLVISLFVARIEATSSQL 290

Query: 241 NAEDDFLSPLRPFLFEKTDLFWHELRCFAGSPLRMEEYDSVVEYRTVG 289
           NAEDDFLSPLRPFLFEKTDLFWHELRCFAGSPLRMEEYDSVVEYRTVG
Sbjct: 291 NAEDDFLSPLRPFLFEKTDLFWHELRCFAGSPLRMEEYDSVVEYRTVG 338

[Close]

BLAST of PI0028217 vs. ExPASy TrEMBL
Match: A0A6J1KEK6 (E3 ubiquitin-protein ligase Topors isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111494293 PE=4 SV=1)

HSP 1 Score: 497.7 bits (1280), Expect = 3.3e-137
Identity = 241/282 (85.46%), Postives = 259/282 (91.84%), Query Frame = 0


Query: 6   STGEPARKLNGENFITKVISPAICGETCPICLRELEDRTAAVLTTCIHAYCIGCIRKWSN 65
           STGEPARKLNGENF+ KVISPAICG+TCPICLRELEDRTAAVLTTCIHAYC+GCIRKWSN
Sbjct: 10  STGEPARKLNGENFVVKVISPAICGQTCPICLRELEDRTAAVLTTCIHAYCVGCIRKWSN 69

Query: 66  LKRTCPLCNAQFDSWFTKINLSSQSFRKERLTTPNCSDKLKVGVGSSQTDARGILQSTRN 125
           LKRTCPLCNAQFDSWF KINLSS+SFRKERL   NC+D LK+G+GSS+TDAR ILQSTRN
Sbjct: 70  LKRTCPLCNAQFDSWFCKINLSSRSFRKERLPNLNCADNLKIGIGSSRTDARRILQSTRN 129

Query: 126 ELNRERRSERSLTWRRSFGRRGPESLPVDVVVRRKLQWRASIYNRCIQAVPSSVRSFLEM 185
           EL+R+RRSER LTWRRSFGRRGPES+P DV+  RKLQWRASIY+R IQAVPSSVRS L M
Sbjct: 130 ELSRDRRSERPLTWRRSFGRRGPESVPTDVIAWRKLQWRASIYDRRIQAVPSSVRSCLVM 189

Query: 186 NILGSRGGKEVILERIKPWIQRELQVILEDPDPTIIVHLVTSLFVARLEATSSLLNAEDD 245
           N+ GS G KE ILERIKPWIQREL+ IL DPDPTIIVHLVTSLFVARLEA SS LNAE+D
Sbjct: 190 NLTGSHGVKEAILERIKPWIQRELEAILGDPDPTIIVHLVTSLFVARLEAPSSQLNAEND 249

Query: 246 FLSPLRPFLFEKTDLFWHELRCFAGSPLRMEEYDSVVEYRTV 288
           FLSPLRPFL+EKTDLFWHELRCFAGS LRMEEYDSVVEYRT+
Sbjct: 250 FLSPLRPFLYEKTDLFWHELRCFAGSSLRMEEYDSVVEYRTM 291

[Close]

BLAST of PI0028217 vs. ExPASy TrEMBL
Match: A0A6J1EQ79 (E3 ubiquitin-protein ligase Topors isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111436818 PE=4 SV=1)

HSP 1 Score: 491.9 bits (1265), Expect = 1.8e-135
Identity = 239/282 (84.75%), Postives = 257/282 (91.13%), Query Frame = 0


Query: 6   STGEPARKLNGENFITKVISPAICGETCPICLRELEDRTAAVLTTCIHAYCIGCIRKWSN 65
           ST EPARKLNGENF+ KVISPAICGETCPICLRELEDR AAVLTTCIHAYC+GCIRKWSN
Sbjct: 10  STPEPARKLNGENFVVKVISPAICGETCPICLRELEDRIAAVLTTCIHAYCVGCIRKWSN 69

Query: 66  LKRTCPLCNAQFDSWFTKINLSSQSFRKERLTTPNCSDKLKVGVGSSQTDARGILQSTRN 125
           LKRTCPLCNAQFDSWF+KI LSS+SFRKERL   NC+D LK+G+GSS+TDAR ILQSTRN
Sbjct: 70  LKRTCPLCNAQFDSWFSKIKLSSRSFRKERLPNLNCADNLKIGIGSSRTDARRILQSTRN 129

Query: 126 ELNRERRSERSLTWRRSFGRRGPESLPVDVVVRRKLQWRASIYNRCIQAVPSSVRSFLEM 185
           EL+R+RRSER LTWRRSFGRRGPES+P DV+  RKLQWRASIY+R IQAVPSSVRS L M
Sbjct: 130 ELSRDRRSERPLTWRRSFGRRGPESVPTDVIAWRKLQWRASIYDRRIQAVPSSVRSCLVM 189

Query: 186 NILGSRGGKEVILERIKPWIQRELQVILEDPDPTIIVHLVTSLFVARLEATSSLLNAEDD 245
           N+ GS G KE ILERIKPWIQREL+ IL DPDPTIIVHLVTSLFVARLEA SS LNAE+D
Sbjct: 190 NLTGSHGVKEAILERIKPWIQRELEAILGDPDPTIIVHLVTSLFVARLEAPSSQLNAEND 249

Query: 246 FLSPLRPFLFEKTDLFWHELRCFAGSPLRMEEYDSVVEYRTV 288
           FLSPLRPFL+EKTDLFWHELRCFAGS LRMEEYDSVVEYRT+
Sbjct: 250 FLSPLRPFLYEKTDLFWHELRCFAGSSLRMEEYDSVVEYRTM 291

[Close]

BLAST of PI0028217 vs. ExPASy TrEMBL
Match: A0A6J1CAG7 (E3 ubiquitin-protein ligase Topors OS=Momordica charantia OX=3673 GN=LOC111009859 PE=4 SV=1)

HSP 1 Score: 456.1 bits (1172), Expect = 1.1e-124
Identity = 225/287 (78.40%), Postives = 243/287 (84.67%), Query Frame = 0


Query: 1   MKPSSSTGEPARKLNGENFITKVISPAICGETCPICLRELEDRTAAVLTTCIHAYCIGCI 60
           MKP  +T EP RKLN ENF++KVISPAICGETCPICLREL+D T AVLT+CIHAYC+ CI
Sbjct: 1   MKP--ATREPRRKLNRENFVSKVISPAICGETCPICLRELQDCTTAVLTSCIHAYCVECI 60

Query: 61  RKWSNLKRTCPLCNAQFDSWFTKINLSSQSFRKERLTTPNCSDKLKVGVGSSQTDARGIL 120
           RKWS LKRTCPLCNAQF+SWF+KIN SS SFRKE L T NC DKL  GVGSS+ D+R +L
Sbjct: 61  RKWSTLKRTCPLCNAQFESWFSKINFSSSSFRKEHLPTLNCVDKLNTGVGSSRIDSRRLL 120

Query: 121 QSTRNELNRERRSERSLTWRRSFGRRGPESLPVDVVVRRKLQWRASIYNRCIQAVPSSVR 180
           Q  RNELNR RRSE  LTWRRSFGRRG E +P DV+ +RKLQWRASIYNR IQAVPSSVR
Sbjct: 121 QRARNELNRVRRSEIPLTWRRSFGRRGSEPVPADVIAQRKLQWRASIYNRHIQAVPSSVR 180

Query: 181 SFLEMNILGSRGGKEVILERIKPWIQRELQVILEDPDPTIIVHLVTSLFVARLEATSSLL 240
              E+NI GS G KE ILE+IKPWIQRELQ ILEDPDPTIIVHLVTSLFV+RLEA SS L
Sbjct: 181 CGAELNISGSHGAKEAILEKIKPWIQRELQAILEDPDPTIIVHLVTSLFVSRLEAPSSQL 240

Query: 241 NAEDDFLSPLRPFLFEKTDLFWHELRCFAGSPLRMEEYDSVVEYRTV 288
           N EDDFL  L PFL+EKTDLFWHELRCFAGS LRMEEYDSVVEYRTV
Sbjct: 241 NPEDDFLLALHPFLYEKTDLFWHELRCFAGSSLRMEEYDSVVEYRTV 285

[Close]

BLAST of PI0028217 vs. NCBI nr
Match: XP_008458477.1 (PREDICTED: E3 ubiquitin-protein ligase Topors [Cucumis melo])

HSP 1 Score: 558.5 bits (1438), Expect = 3.3e-155
Identity = 275/288 (95.49%), Postives = 280/288 (97.22%), Query Frame = 0


Query: 1   MKPSSSTGEPARKLNGENFITKVISPAICGETCPICLRELEDRTAAVLTTCIHAYCIGCI 60
           MKPSSST EPARKLNGENFITKVISPAICGETCPICLRELEDRTAAVLTTCIHAYCIGCI
Sbjct: 1   MKPSSSTREPARKLNGENFITKVISPAICGETCPICLRELEDRTAAVLTTCIHAYCIGCI 60

Query: 61  RKWSNLKRTCPLCNAQFDSWFTKINLSSQSFRKERLTTPNCSDKLKVGVGSSQTDARGIL 120
           RKWSNLKRTCPLCNAQFDSWFTKINLSSQSFRKERL T NCS+KLKVGVGSSQTDARGIL
Sbjct: 61  RKWSNLKRTCPLCNAQFDSWFTKINLSSQSFRKERLKTSNCSEKLKVGVGSSQTDARGIL 120

Query: 121 QSTRNELNRERRSERSLTWRRSFGRRGPESLPVDVVVRRKLQWRASIYNRCIQAVPSSVR 180
           QSTR ELNRERRSERSLTWRRSFGRRGP+SLP DVVVRRKLQWRASIYNRCIQAVPSSVR
Sbjct: 121 QSTRYELNRERRSERSLTWRRSFGRRGPDSLPADVVVRRKLQWRASIYNRCIQAVPSSVR 180

Query: 181 SFLEMNILGSRGGKEVILERIKPWIQRELQVILEDPDPTIIVHLVTSLFVARLEATSSLL 240
           S LE+NILG+RGGKEVILERIKPWIQRELQVILEDPDPTIIVHLV SLFVARLEATSS L
Sbjct: 181 SCLELNILGNRGGKEVILERIKPWIQRELQVILEDPDPTIIVHLVISLFVARLEATSSQL 240

Query: 241 NAEDDFLSPLRPFLFEKTDLFWHELRCFAGSPLRMEEYDSVVEYRTVG 289
           NAEDDFLSPLRPFLFEKTDLFWHELRCFAGSPLRMEEYDSVVEYR+VG
Sbjct: 241 NAEDDFLSPLRPFLFEKTDLFWHELRCFAGSPLRMEEYDSVVEYRSVG 288

[Close]

BLAST of PI0028217 vs. NCBI nr
Match: XP_004143083.1 (E3 ubiquitin-protein ligase Topors [Cucumis sativus])

HSP 1 Score: 553.5 bits (1425), Expect = 1.1e-153
Identity = 273/288 (94.79%), Postives = 277/288 (96.18%), Query Frame = 0


Query: 1   MKPSSSTGEPARKLNGENFITKVISPAICGETCPICLRELEDRTAAVLTTCIHAYCIGCI 60
           MK SSST EPARKLNGENFITKVISPAICGETCPICLRELEDRTAAVLTTCIHAYCI CI
Sbjct: 1   MKRSSSTREPARKLNGENFITKVISPAICGETCPICLRELEDRTAAVLTTCIHAYCISCI 60

Query: 61  RKWSNLKRTCPLCNAQFDSWFTKINLSSQSFRKERLTTPNCSDKLKVGVGSSQTDARGIL 120
           RKWSNLKRTCPLCNAQFDSWFTKINLSSQSFRKERLTT NCSDKLKVGVGSSQ DARGIL
Sbjct: 61  RKWSNLKRTCPLCNAQFDSWFTKINLSSQSFRKERLTTSNCSDKLKVGVGSSQIDARGIL 120

Query: 121 QSTRNELNRERRSERSLTWRRSFGRRGPESLPVDVVVRRKLQWRASIYNRCIQAVPSSVR 180
           QSTR ELNRERRSERSLTWRRSFGRRGP+SLP DVVVRRK QWRASIYNRCIQAVPSSVR
Sbjct: 121 QSTRYELNRERRSERSLTWRRSFGRRGPDSLPADVVVRRKRQWRASIYNRCIQAVPSSVR 180

Query: 181 SFLEMNILGSRGGKEVILERIKPWIQRELQVILEDPDPTIIVHLVTSLFVARLEATSSLL 240
           S LE+N+LGSRGGKEVILERIKPWIQRELQVILEDPDPTIIVHLV SLFVAR+EATSS L
Sbjct: 181 SCLELNVLGSRGGKEVILERIKPWIQRELQVILEDPDPTIIVHLVISLFVARIEATSSQL 240

Query: 241 NAEDDFLSPLRPFLFEKTDLFWHELRCFAGSPLRMEEYDSVVEYRTVG 289
           NAEDDFLSPLRPFLFEKTDLFWHELRCFAGSPLRMEEYDSVVEYRTVG
Sbjct: 241 NAEDDFLSPLRPFLFEKTDLFWHELRCFAGSPLRMEEYDSVVEYRTVG 288

[Close]

BLAST of PI0028217 vs. NCBI nr
Match: KAE8646983.1 (hypothetical protein Csa_020881 [Cucumis sativus])

HSP 1 Score: 550.8 bits (1418), Expect = 6.9e-153
Identity = 272/287 (94.77%), Postives = 276/287 (96.17%), Query Frame = 0


Query: 1   MKPSSSTGEPARKLNGENFITKVISPAICGETCPICLRELEDRTAAVLTTCIHAYCIGCI 60
           MK SSST EPARKLNGENFITKVISPAICGETCPICLRELEDRTAAVLTTCIHAYCI CI
Sbjct: 1   MKRSSSTREPARKLNGENFITKVISPAICGETCPICLRELEDRTAAVLTTCIHAYCISCI 60

Query: 61  RKWSNLKRTCPLCNAQFDSWFTKINLSSQSFRKERLTTPNCSDKLKVGVGSSQTDARGIL 120
           RKWSNLKRTCPLCNAQFDSWFTKINLSSQSFRKERLTT NCSDKLKVGVGSSQ DARGIL
Sbjct: 61  RKWSNLKRTCPLCNAQFDSWFTKINLSSQSFRKERLTTSNCSDKLKVGVGSSQIDARGIL 120

Query: 121 QSTRNELNRERRSERSLTWRRSFGRRGPESLPVDVVVRRKLQWRASIYNRCIQAVPSSVR 180
           QSTR ELNRERRSERSLTWRRSFGRRGP+SLP DVVVRRK QWRASIYNRCIQAVPSSVR
Sbjct: 121 QSTRYELNRERRSERSLTWRRSFGRRGPDSLPADVVVRRKRQWRASIYNRCIQAVPSSVR 180

Query: 181 SFLEMNILGSRGGKEVILERIKPWIQRELQVILEDPDPTIIVHLVTSLFVARLEATSSLL 240
           S LE+N+LGSRGGKEVILERIKPWIQRELQVILEDPDPTIIVHLV SLFVAR+EATSS L
Sbjct: 181 SCLELNVLGSRGGKEVILERIKPWIQRELQVILEDPDPTIIVHLVISLFVARIEATSSQL 240

Query: 241 NAEDDFLSPLRPFLFEKTDLFWHELRCFAGSPLRMEEYDSVVEYRTV 288
           NAEDDFLSPLRPFLFEKTDLFWHELRCFAGSPLRMEEYDSVVEYRTV
Sbjct: 241 NAEDDFLSPLRPFLFEKTDLFWHELRCFAGSPLRMEEYDSVVEYRTV 287

[Close]

BLAST of PI0028217 vs. NCBI nr
Match: XP_038875512.1 (E3 ubiquitin-protein ligase Topors isoform X1 [Benincasa hispida])

HSP 1 Score: 513.8 bits (1322), Expect = 9.3e-142
Identity = 254/288 (88.19%), Postives = 265/288 (92.01%), Query Frame = 0


Query: 1   MKPSSSTGEPARKLNGENFITKVISPAICGETCPICLRELEDRTAAVLTTCIHAYCIGCI 60
           MKP  ST EPA KLNGENFI+KVISPAICGETCPICL EL+DRTAAVLTTCIHAYCIGCI
Sbjct: 7   MKP--STREPAPKLNGENFISKVISPAICGETCPICLIELKDRTAAVLTTCIHAYCIGCI 66

Query: 61  RKWSNLKRTCPLCNAQFDSWFTKINLSSQSFRKERLTTPNCSDKLKVGVGSSQTDARGIL 120
           RKWSNLKRTCPLCNAQFDSWF KINLSS+SFR ERL T NC DKLK+GVGSS+TDARGIL
Sbjct: 67  RKWSNLKRTCPLCNAQFDSWFAKINLSSRSFRIERLKTLNCPDKLKIGVGSSRTDARGIL 126

Query: 121 QSTRNELNRERRSERSLTWRRSFGRRGPESLPVDVVVRRKLQWRASIYNRCIQAVPSSVR 180
           QSTRNELNRERRSERSLTWRRSFGRRGPES+P DVV  R+LQWRASIYNRCIQA+PSSVR
Sbjct: 127 QSTRNELNRERRSERSLTWRRSFGRRGPESVPADVVAGRELQWRASIYNRCIQALPSSVR 186

Query: 181 SFLEMNILGSRGGKEVILERIKPWIQRELQVILEDPDPTIIVHLVTSLFVARLEATSSLL 240
           S LE+NILGSRG KE ILERIKPWI+RELQ ILEDPDPTIIVHLV SLFVARLE  S  L
Sbjct: 187 SCLELNILGSRGAKEAILERIKPWIRRELQAILEDPDPTIIVHLVISLFVARLEVPSPQL 246

Query: 241 NAEDDFLSPLRPFLFEKTDLFWHELRCFAGSPLRMEEYDSVVEYRTVG 289
           NAEDDFLSPLRPFLFEKTDLFWHELRCFAGS LRMEEYDSVVEYRT+G
Sbjct: 247 NAEDDFLSPLRPFLFEKTDLFWHELRCFAGSSLRMEEYDSVVEYRTLG 292

[Close]

BLAST of PI0028217 vs. NCBI nr
Match: XP_022999966.1 (E3 ubiquitin-protein ligase Topors isoform X1 [Cucurbita maxima])

HSP 1 Score: 497.7 bits (1280), Expect = 6.9e-137
Identity = 241/282 (85.46%), Postives = 259/282 (91.84%), Query Frame = 0


Query: 6   STGEPARKLNGENFITKVISPAICGETCPICLRELEDRTAAVLTTCIHAYCIGCIRKWSN 65
           STGEPARKLNGENF+ KVISPAICG+TCPICLRELEDRTAAVLTTCIHAYC+GCIRKWSN
Sbjct: 10  STGEPARKLNGENFVVKVISPAICGQTCPICLRELEDRTAAVLTTCIHAYCVGCIRKWSN 69

Query: 66  LKRTCPLCNAQFDSWFTKINLSSQSFRKERLTTPNCSDKLKVGVGSSQTDARGILQSTRN 125
           LKRTCPLCNAQFDSWF KINLSS+SFRKERL   NC+D LK+G+GSS+TDAR ILQSTRN
Sbjct: 70  LKRTCPLCNAQFDSWFCKINLSSRSFRKERLPNLNCADNLKIGIGSSRTDARRILQSTRN 129

Query: 126 ELNRERRSERSLTWRRSFGRRGPESLPVDVVVRRKLQWRASIYNRCIQAVPSSVRSFLEM 185
           EL+R+RRSER LTWRRSFGRRGPES+P DV+  RKLQWRASIY+R IQAVPSSVRS L M
Sbjct: 130 ELSRDRRSERPLTWRRSFGRRGPESVPTDVIAWRKLQWRASIYDRRIQAVPSSVRSCLVM 189

Query: 186 NILGSRGGKEVILERIKPWIQRELQVILEDPDPTIIVHLVTSLFVARLEATSSLLNAEDD 245
           N+ GS G KE ILERIKPWIQREL+ IL DPDPTIIVHLVTSLFVARLEA SS LNAE+D
Sbjct: 190 NLTGSHGVKEAILERIKPWIQRELEAILGDPDPTIIVHLVTSLFVARLEAPSSQLNAEND 249

Query: 246 FLSPLRPFLFEKTDLFWHELRCFAGSPLRMEEYDSVVEYRTV 288
           FLSPLRPFL+EKTDLFWHELRCFAGS LRMEEYDSVVEYRT+
Sbjct: 250 FLSPLRPFLYEKTDLFWHELRCFAGSSLRMEEYDSVVEYRTM 291

[Close]

BLAST of PI0028217 vs. TAIR 10
Match: AT2G39100.1 (RING/U-box superfamily protein )

HSP 1 Score: 250.8 bits (639), Expect = 1.4e-66
Identity = 137/295 (46.44%), Postives = 185/295 (62.71%), Query Frame = 0


Query: 3   PSSSTGEPARKLNGENFITK----VISPAICGETCPICLREL-EDRTAAVLTTCIHAYCI 62
           PSS+    +R L     I K     I PA+ G++CPICL  L E R+AAV+T C H YC+
Sbjct: 5   PSSTAPSSSRHLRSPESIAKFAGRAIFPALQGKSCPICLENLTERRSAAVITVCKHGYCL 64

Query: 63  GCIRKWSNLKRTCPLCNAQFDSWFTKINLSSQSFRKERLTTPNCSDKLKVGVGSSQTDAR 122
            CIRKWS+ KR CPLCN +FDSWF   + +S+ + KE+L      + L     ++ +D R
Sbjct: 65  ACIRKWSSFKRNCPLCNTRFDSWFIVSDFASRKYHKEQLPILRDRETLTYH-RNNPSDRR 124

Query: 123 GILQSTRNELNRERRSERSLTWRRSFGRRGPESLPVDVVVRRKLQWRASIYNRCIQAVPS 182
            I+Q +R+ L       R L WRRSFGR  P S+P  V+ +RKLQWRASIY + ++AV  
Sbjct: 125 RIIQRSRDVLENSSSRSRPLPWRRSFGR--PGSVPDSVIFQRKLQWRASIYTKQLRAVRL 184

Query: 183 SVRSFLEMNILGSRGGKEVILERIKPWIQRELQVILEDPDPTIIVHLVTSLFVARLEATS 242
             R  LE+++  +   K  I ERI+PWI+RELQ +L DPDP++IVH  ++LF+ RLE  +
Sbjct: 185 HSRR-LELSLAVNDYTKAKITERIEPWIRRELQAVLGDPDPSVIVHFASALFIKRLEREN 244

Query: 243 SLLNAE-----DDFLSPLRPFLFEKTDLFWHELRCFAGSPLRMEEYDSVVEYRTV 288
           +    +     +D +S LR FL +K D+FWHELRCFA S L ME YD+VVEY  V
Sbjct: 245 NRQTGQTGMLVEDEVSSLRKFLSDKVDIFWHELRCFAESILTMETYDAVVEYNEV 295

[Close]

BLAST of PI0028217 vs. TAIR 10
Match: AT5G12310.1 (RING/U-box superfamily protein )

HSP 1 Score: 49.3 bits (116), Expect = 6.1e-06
Identity = 21/51 (41.18%), Postives = 29/51 (56.86%), Query Frame = 0


Query: 30 GETCPICLRELEDRTAAVLTTCIHAYCIGCIRKWSNLKR--TCPLCNAQFD 79
          G  C ICL  +  +  A++  C HAYC+ CI +W++ K   TCP C   FD
Sbjct: 40 GGCCAICLDTIPLQETAMVKGCEHAYCVTCILRWASYKEKPTCPQCKLPFD 90

[Close]

BLAST of PI0028217 vs. TAIR 10
Match: AT2G35420.1 (RING/U-box superfamily protein )

HSP 1 Score: 48.1 bits (113), Expect = 1.3e-05
Identity = 20/50 (40.00%), Postives = 26/50 (52.00%), Query Frame = 0


Query: 30  GETCPICLRELEDR-TAAVLTTCIHAYCIGCIRKWSNLKRTCPLCNAQFD 79
           G  C ICL E  D  T  ++T C H +   CI  W  L +TCP+C  + D
Sbjct: 100 GTECAICLSEFSDEDTVRLITVCRHPFHSNCIDLWFELHKTCPVCRCELD 149

[Close]

BLAST of PI0028217 vs. TAIR 10
Match: AT1G72220.1 (RING/U-box superfamily protein )

HSP 1 Score: 46.6 bits (109), Expect = 3.9e-05
Identity = 20/44 (45.45%), Postives = 25/44 (56.82%), Query Frame = 0


Query: 33  CPICLREL-EDRTAAVLTTCIHAYCIGCIRKWSNLKRTCPLCNA 76
           CP+CL E  ED +  +L  C HA+ I CI  W +    CPLC A
Sbjct: 177 CPVCLNEFEEDESLRLLPKCNHAFHISCIDTWLSSHTNCPLCRA 220

[Close]

BLAST of PI0028217 vs. TAIR 10
Match: AT1G35330.1 (RING/U-box superfamily protein )

HSP 1 Score: 45.8 bits (107), Expect = 6.7e-05
Identity = 20/47 (42.55%), Postives = 26/47 (55.32%), Query Frame = 0


Query: 30  GETCPICLRELED-RTAAVLTTCIHAYCIGCIRKWSNLKRTCPLCNA 76
           G  C ICL E ED  T  ++  C HA+   CI  W + + TCP+C A
Sbjct: 125 GVECAICLNEFEDEETLRLMPPCSHAFHASCIDVWLSSRSTCPVCRA 171

The following BLAST results are available for this feature:

BLAST of PI0028217 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9NS56	2.6e-14	28.23	E3 ubiquitin-protein ligase Topors OS=Homo sapiens OX=9606 GN=TOPORS PE=1 SV=1	[more]
Q80Z37	1.7e-13	26.67	E3 ubiquitin-protein ligase Topors OS=Mus musculus OX=10090 GN=Topors PE=1 SV=1	[more]
P08393	2.6e-06	32.43	E3 ubiquitin-protein ligase ICP0 OS=Human herpesvirus 1 (strain 17) OX=10299 GN=...	[more]
P28284	1.1e-04	37.78	E3 ubiquitin-protein ligase ICP0 OS=Human herpesvirus 2 (strain HG52) OX=10315 G...	[more]
Q5BIY5	1.1e-04	40.82	RING finger protein 145 OS=Xenopus laevis OX=8355 GN=rnf145 PE=2 SV=1	[more]

BLAST of PI0028217 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3C7X8	1.6e-155	95.49	E3 ubiquitin-protein ligase Topors OS=Cucumis melo OX=3656 GN=LOC103497872 PE=4 ...	[more]
A0A0A0KCD1	5.1e-154	94.79	RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G198260 P...	[more]
A0A6J1KEK6	3.3e-137	85.46	E3 ubiquitin-protein ligase Topors isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC...	[more]
A0A6J1EQ79	1.8e-135	84.75	E3 ubiquitin-protein ligase Topors isoform X1 OS=Cucurbita moschata OX=3662 GN=L...	[more]
A0A6J1CAG7	1.1e-124	78.40	E3 ubiquitin-protein ligase Topors OS=Momordica charantia OX=3673 GN=LOC11100985...	[more]

BLAST of PI0028217 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008458477.1	3.3e-155	95.49	PREDICTED: E3 ubiquitin-protein ligase Topors [Cucumis melo]	[more]
XP_004143083.1	1.1e-153	94.79	E3 ubiquitin-protein ligase Topors [Cucumis sativus]	[more]
KAE8646983.1	6.9e-153	94.77	hypothetical protein Csa_020881 [Cucumis sativus]	[more]
XP_038875512.1	9.3e-142	88.19	E3 ubiquitin-protein ligase Topors isoform X1 [Benincasa hispida]	[more]
XP_022999966.1	6.9e-137	85.46	E3 ubiquitin-protein ligase Topors isoform X1 [Cucurbita maxima]	[more]

BLAST of PI0028217 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G39100.1	1.4e-66	46.44	RING/U-box superfamily protein	[more]
AT5G12310.1	6.1e-06	41.18	RING/U-box superfamily protein	[more]
AT2G35420.1	1.3e-05	40.00	RING/U-box superfamily protein	[more]
AT1G72220.1	3.9e-05	45.45	RING/U-box superfamily protein	[more]
AT1G35330.1	6.7e-05	42.55	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 33..73 e-value: 4.0E-7 score: 39.7
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 32..74 e-value: 5.9E-9 score: 36.1
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 33..74 score: 12.99088
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 30..136 e-value: 2.0E-14 score: 55.8
None	No IPR available	PANTHER	PTHR46077	E3 UBIQUITIN-PROTEIN LIGASE TOPORS	coord: 15..285
None	No IPR available	PANTHER	PTHR46077:SF1	TOPOISOMERASE I-BINDING, ARGININE/SERINE-RICH A-RELATED	coord: 15..285
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 28..80
IPR017907	Zinc finger, RING-type, conserved site	PROSITE	PS00518	ZF_RING_1	coord: 51..60

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0028217.3	PI0028217.3	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006513	protein monoubiquitination
biological_process	GO:0000209	protein polyubiquitination
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0061630	ubiquitin protein ligase activity