PI0028181 (gene) Melon (PI 482460) v1

Overview


Name	PI0028181
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	2-methoxy-6-polyprenyl-1,4-benzoquinol methylase
Location	chr03: 24789760 .. 24790182 (+)
RNA-Seq Expression	PI0028181
Synteny	PI0028181

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTAGTCGAAGAGGAGGAATCCCTGTCGCGGGGGACAACCGTGAGCAAGAAGAGGTGGAGGAGATCGCCACCCTATCTCCAAGGACATCCACGGTACGCTTGCTGGCCGTCAAAGACTCCTTGGGAGATTTACACGAAAAATTTGATAGAGTAATGGATACTTTGGAAACACTGACTCGAAGGATGGACGGACTACCGGCTTCAGCAAGAATTGAAGCCAACGTAAATAATGATCGGAACGACGGAAATAGAGGAGGCCGACAAGCTCGAAGGAATTTTAGAACTTTGCCCAATCAAAGGAATGATCAAAGAAGGAGGCCAATGGAGAATCCGCTGCGATATGCCGACGATGATTCAATGGAAGAATATGGAGCTTGGCAAAATGGGCAAGAATGTGATTCTTCCAGTGGTGATGAGTAA

mRNA sequence

ATGGCTAGTCGAAGAGGAGGAATCCCTGTCGCGGGGGACAACCGTGAGCAAGAAGAGGTGGAGGAGATCGCCACCCTATCTCCAAGGACATCCACGGTACGCTTGCTGGCCGTCAAAGACTCCTTGGGAGATTTACACGAAAAATTTGATAGAGTAATGGATACTTTGGAAACACTGACTCGAAGGATGGACGGACTACCGGCTTCAGCAAGAATTGAAGCCAACGTAAATAATGATCGGAACGACGGAAATAGAGGAGGCCGACAAGCTCGAAGGAATTTTAGAACTTTGCCCAATCAAAGGAATGATCAAAGAAGGAGGCCAATGGAGAATCCGCTGCGATATGCCGACGATGATTCAATGGAAGAATATGGAGCTTGGCAAAATGGGCAAGAATGTGATTCTTCCAGTGGTGATGAGTAA

Coding sequence (CDS)

ATGGCTAGTCGAAGAGGAGGAATCCCTGTCGCGGGGGACAACCGTGAGCAAGAAGAGGTGGAGGAGATCGCCACCCTATCTCCAAGGACATCCACGGTACGCTTGCTGGCCGTCAAAGACTCCTTGGGAGATTTACACGAAAAATTTGATAGAGTAATGGATACTTTGGAAACACTGACTCGAAGGATGGACGGACTACCGGCTTCAGCAAGAATTGAAGCCAACGTAAATAATGATCGGAACGACGGAAATAGAGGAGGCCGACAAGCTCGAAGGAATTTTAGAACTTTGCCCAATCAAAGGAATGATCAAAGAAGGAGGCCAATGGAGAATCCGCTGCGATATGCCGACGATGATTCAATGGAAGAATATGGAGCTTGGCAAAATGGGCAAGAATGTGATTCTTCCAGTGGTGATGAGTAA

Protein sequence

MASRRGGIPVAGDNREQEEVEEIATLSPRTSTVRLLAVKDSLGDLHEKFDRVMDTLETLTRRMDGLPASARIEANVNNDRNDGNRGGRQARRNFRTLPNQRNDQRRRPMENPLRYADDDSMEEYGAWQNGQECDSSSGDE

Homology

[Close]

BLAST of PI0028181 vs. ExPASy TrEMBL
Match: A0A5D3CJ99 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold227G00470 PE=4 SV=1)

HSP 1 Score: 238.4 bits (607), Expect = 1.8e-59
Identity = 123/140 (87.86%), Postives = 127/140 (90.71%), Query Frame = 0


Query: 1   MASRRGGIPVAGDNREQEEVEEIATLSPRTSTVRLLAVKDSLGDLHEKFDRVMDTLETLT 60
           MA RR GIP  GDNREQEEVEE A LSPRTSTV  LAV+DSLGDLHEKFDRVMDTLETLT
Sbjct: 1   MAGRREGIPATGDNREQEEVEENAALSPRTSTVCFLAVEDSLGDLHEKFDRVMDTLETLT 60

Query: 61  RRMDGLPASARIEANVNNDRNDGNRGGRQARRNFRTLPNQRNDQRRRPMENPLRYADDDS 120
           RRMDGLPA ARIEAN NNDRNDGNRGGR+ARRNFR LPNQRNDQR+RPMENPLRYAD+DS
Sbjct: 61  RRMDGLPALARIEANANNDRNDGNRGGRRARRNFRNLPNQRNDQRKRPMENPLRYADNDS 120

Query: 121 MEEYGAWQNGQECDSSSGDE 141
           MEEY AWQNGQECDSSS DE
Sbjct: 121 MEEYEAWQNGQECDSSSSDE 140

[Close]

BLAST of PI0028181 vs. ExPASy TrEMBL
Match: A0A5A7UQ86 (RNA-directed DNA polymerase-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold280G001990 PE=4 SV=1)

HSP 1 Score: 216.5 bits (550), Expect = 7.2e-53
Identity = 114/140 (81.43%), Postives = 124/140 (88.57%), Query Frame = 0


Query: 1   MASRRGGIPVAGDNREQEEVEEIATLSPRTSTVRLLAVKDSLGDLHEKFDRVMDTLETLT 60
           MA RRGGIP AGDNREQEEVE IATLSPRTSTVRLLAVKD LGDLHEKF+R+MD LETLT
Sbjct: 1   MADRRGGIPAAGDNREQEEVEAIATLSPRTSTVRLLAVKDFLGDLHEKFNRMMDNLETLT 60

Query: 61  RRMDGLPASARIEANVNNDRNDGNRGGRQARRNFRTLPNQRNDQRRRPMENPLRYADDDS 120
           +RMDGLPA ARIEAN+N DRN+ NRGGR+A+RNF  +PNQRNDQ RRPME PLRYADDDS
Sbjct: 61  QRMDGLPAPARIEANMNIDRNERNRGGRRAQRNFSNMPNQRNDQIRRPMEMPLRYADDDS 120

Query: 121 MEEYGAWQNGQECDSSSGDE 141
           +E+  AWQN QE DSSSGDE
Sbjct: 121 LEKGDAWQNRQEYDSSSGDE 140

[Close]

BLAST of PI0028181 vs. ExPASy TrEMBL
Match: A0A5A7UR03 (2-methoxy-6-polyprenyl-1,4-benzoquinol methylase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold486G00180 PE=4 SV=1)

HSP 1 Score: 202.2 bits (513), Expect = 1.4e-48
Identity = 111/134 (82.84%), Postives = 117/134 (87.31%), Query Frame = 0


Query: 9   PVAGDNREQEEVEEIATLSPRTSTVRLLAVKDSLGDLHEKFDRVMDTLETLTRRMDGLPA 68
           P  G   EQE+VEEI TLSPRTSTV LLA +DSLGDLHEKFDRVMDTLETLTRRMD L A
Sbjct: 294 PCHGGQPEQEKVEEIDTLSPRTSTVHLLAFEDSLGDLHEKFDRVMDTLETLTRRMDRLLA 353

Query: 69  SARIEANVNNDR--NDGNRGGRQARRNFRTLPNQRNDQRRRPMENPLRYADDDSMEEYGA 128
            ARIEANVNN+R  NDGNRGGR+ARRNFR LPNQR+DQRRRPMENPLRYADD+SMEEY A
Sbjct: 354 PARIEANVNNNRNKNDGNRGGRRARRNFRNLPNQRHDQRRRPMENPLRYADDNSMEEYEA 413

Query: 129 WQNGQECDSSSGDE 141
            QNGQECDSSS DE
Sbjct: 414 RQNGQECDSSSSDE 427

[Close]

BLAST of PI0028181 vs. ExPASy TrEMBL
Match: A0A5D3DBZ2 (2-methoxy-6-polyprenyl-1,4-benzoquinol methylase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold778G00120 PE=4 SV=1)

HSP 1 Score: 202.2 bits (513), Expect = 1.4e-48
Identity = 111/134 (82.84%), Postives = 117/134 (87.31%), Query Frame = 0


Query: 9   PVAGDNREQEEVEEIATLSPRTSTVRLLAVKDSLGDLHEKFDRVMDTLETLTRRMDGLPA 68
           P  G   EQE+VEEI TLSPRTSTV LLA +DSLGDLHEKFDRVMDTLETLTRRMD L A
Sbjct: 205 PCHGGQPEQEKVEEIDTLSPRTSTVHLLAFEDSLGDLHEKFDRVMDTLETLTRRMDRLLA 264

Query: 69  SARIEANVNNDR--NDGNRGGRQARRNFRTLPNQRNDQRRRPMENPLRYADDDSMEEYGA 128
            ARIEANVNN+R  NDGNRGGR+ARRNFR LPNQR+DQRRRPMENPLRYADD+SMEEY A
Sbjct: 265 PARIEANVNNNRNKNDGNRGGRRARRNFRNLPNQRHDQRRRPMENPLRYADDNSMEEYEA 324

Query: 129 WQNGQECDSSSGDE 141
            QNGQECDSSS DE
Sbjct: 325 RQNGQECDSSSSDE 338

[Close]

BLAST of PI0028181 vs. ExPASy TrEMBL
Match: A0A5D3CLX2 (DExH-box ATP-dependent RNA helicase DExH7 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold227G00630 PE=4 SV=1)

HSP 1 Score: 197.6 bits (501), Expect = 3.5e-47
Identity = 108/140 (77.14%), Postives = 117/140 (83.57%), Query Frame = 0


Query: 1   MASRRGGIPVAGDNREQEEVEEIATLSPRTSTVRLLAVKDSLGDLHEKFDRVMDTLETLT 60
           M  RRGGIP  GDNREQEEVEEI TLSPRTSTV LLAV+DSLGDLH KFDRVMD+LETLT
Sbjct: 232 MVDRRGGIPAVGDNREQEEVEEITTLSPRTSTVCLLAVEDSLGDLHVKFDRVMDSLETLT 291

Query: 61  RRMDGLPASARIEANVNNDRNDGNRGGRQARRNFRTLPNQRNDQRRRPMENPLRYADDDS 120
           RRMDGLPA ARIEA   NDR D NRGGR+ARRNFR LP+QRNDQRRR ++N LRY +DDS
Sbjct: 292 RRMDGLPAQARIEA---NDRVDRNRGGRRARRNFRNLPDQRNDQRRRLLDNSLRYNNDDS 351

Query: 121 MEEYGAWQNGQECDSSSGDE 141
            E Y AWQ+ Q+ DSS GDE
Sbjct: 352 EENYEAWQDVQDYDSSRGDE 368

[Close]

BLAST of PI0028181 vs. NCBI nr
Match: TYK11204.1 (reverse transcriptase [Cucumis melo var. makuwa])

HSP 1 Score: 238.4 bits (607), Expect = 3.7e-59
Identity = 123/140 (87.86%), Postives = 127/140 (90.71%), Query Frame = 0


Query: 1   MASRRGGIPVAGDNREQEEVEEIATLSPRTSTVRLLAVKDSLGDLHEKFDRVMDTLETLT 60
           MA RR GIP  GDNREQEEVEE A LSPRTSTV  LAV+DSLGDLHEKFDRVMDTLETLT
Sbjct: 1   MAGRREGIPATGDNREQEEVEENAALSPRTSTVCFLAVEDSLGDLHEKFDRVMDTLETLT 60

Query: 61  RRMDGLPASARIEANVNNDRNDGNRGGRQARRNFRTLPNQRNDQRRRPMENPLRYADDDS 120
           RRMDGLPA ARIEAN NNDRNDGNRGGR+ARRNFR LPNQRNDQR+RPMENPLRYAD+DS
Sbjct: 61  RRMDGLPALARIEANANNDRNDGNRGGRRARRNFRNLPNQRNDQRKRPMENPLRYADNDS 120

Query: 121 MEEYGAWQNGQECDSSSGDE 141
           MEEY AWQNGQECDSSS DE
Sbjct: 121 MEEYEAWQNGQECDSSSSDE 140

[Close]

BLAST of PI0028181 vs. NCBI nr
Match: KAA0057344.1 (RNA-directed DNA polymerase-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 216.5 bits (550), Expect = 1.5e-52
Identity = 114/140 (81.43%), Postives = 124/140 (88.57%), Query Frame = 0


Query: 1   MASRRGGIPVAGDNREQEEVEEIATLSPRTSTVRLLAVKDSLGDLHEKFDRVMDTLETLT 60
           MA RRGGIP AGDNREQEEVE IATLSPRTSTVRLLAVKD LGDLHEKF+R+MD LETLT
Sbjct: 1   MADRRGGIPAAGDNREQEEVEAIATLSPRTSTVRLLAVKDFLGDLHEKFNRMMDNLETLT 60

Query: 61  RRMDGLPASARIEANVNNDRNDGNRGGRQARRNFRTLPNQRNDQRRRPMENPLRYADDDS 120
           +RMDGLPA ARIEAN+N DRN+ NRGGR+A+RNF  +PNQRNDQ RRPME PLRYADDDS
Sbjct: 61  QRMDGLPAPARIEANMNIDRNERNRGGRRAQRNFSNMPNQRNDQIRRPMEMPLRYADDDS 120

Query: 121 MEEYGAWQNGQECDSSSGDE 141
           +E+  AWQN QE DSSSGDE
Sbjct: 121 LEKGDAWQNRQEYDSSSGDE 140

[Close]

BLAST of PI0028181 vs. NCBI nr
Match: TYK21018.1 (2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [Cucumis melo var. makuwa])

HSP 1 Score: 202.2 bits (513), Expect = 2.9e-48
Identity = 111/134 (82.84%), Postives = 117/134 (87.31%), Query Frame = 0


Query: 9   PVAGDNREQEEVEEIATLSPRTSTVRLLAVKDSLGDLHEKFDRVMDTLETLTRRMDGLPA 68
           P  G   EQE+VEEI TLSPRTSTV LLA +DSLGDLHEKFDRVMDTLETLTRRMD L A
Sbjct: 205 PCHGGQPEQEKVEEIDTLSPRTSTVHLLAFEDSLGDLHEKFDRVMDTLETLTRRMDRLLA 264

Query: 69  SARIEANVNNDR--NDGNRGGRQARRNFRTLPNQRNDQRRRPMENPLRYADDDSMEEYGA 128
            ARIEANVNN+R  NDGNRGGR+ARRNFR LPNQR+DQRRRPMENPLRYADD+SMEEY A
Sbjct: 265 PARIEANVNNNRNKNDGNRGGRRARRNFRNLPNQRHDQRRRPMENPLRYADDNSMEEYEA 324

Query: 129 WQNGQECDSSSGDE 141
            QNGQECDSSS DE
Sbjct: 325 RQNGQECDSSSSDE 338

[Close]

BLAST of PI0028181 vs. NCBI nr
Match: KAA0056746.1 (2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [Cucumis melo var. makuwa])

HSP 1 Score: 202.2 bits (513), Expect = 2.9e-48
Identity = 111/134 (82.84%), Postives = 117/134 (87.31%), Query Frame = 0


Query: 9   PVAGDNREQEEVEEIATLSPRTSTVRLLAVKDSLGDLHEKFDRVMDTLETLTRRMDGLPA 68
           P  G   EQE+VEEI TLSPRTSTV LLA +DSLGDLHEKFDRVMDTLETLTRRMD L A
Sbjct: 294 PCHGGQPEQEKVEEIDTLSPRTSTVHLLAFEDSLGDLHEKFDRVMDTLETLTRRMDRLLA 353

Query: 69  SARIEANVNNDR--NDGNRGGRQARRNFRTLPNQRNDQRRRPMENPLRYADDDSMEEYGA 128
            ARIEANVNN+R  NDGNRGGR+ARRNFR LPNQR+DQRRRPMENPLRYADD+SMEEY A
Sbjct: 354 PARIEANVNNNRNKNDGNRGGRRARRNFRNLPNQRHDQRRRPMENPLRYADDNSMEEYEA 413

Query: 129 WQNGQECDSSSGDE 141
            QNGQECDSSS DE
Sbjct: 414 RQNGQECDSSSSDE 427

[Close]

BLAST of PI0028181 vs. NCBI nr
Match: TYK11219.1 (DExH-box ATP-dependent RNA helicase DExH7 [Cucumis melo var. makuwa])

HSP 1 Score: 197.6 bits (501), Expect = 7.2e-47
Identity = 108/140 (77.14%), Postives = 117/140 (83.57%), Query Frame = 0


Query: 1   MASRRGGIPVAGDNREQEEVEEIATLSPRTSTVRLLAVKDSLGDLHEKFDRVMDTLETLT 60
           M  RRGGIP  GDNREQEEVEEI TLSPRTSTV LLAV+DSLGDLH KFDRVMD+LETLT
Sbjct: 232 MVDRRGGIPAVGDNREQEEVEEITTLSPRTSTVCLLAVEDSLGDLHVKFDRVMDSLETLT 291

Query: 61  RRMDGLPASARIEANVNNDRNDGNRGGRQARRNFRTLPNQRNDQRRRPMENPLRYADDDS 120
           RRMDGLPA ARIEA   NDR D NRGGR+ARRNFR LP+QRNDQRRR ++N LRY +DDS
Sbjct: 292 RRMDGLPAQARIEA---NDRVDRNRGGRRARRNFRNLPDQRNDQRRRLLDNSLRYNNDDS 351

Query: 121 MEEYGAWQNGQECDSSSGDE 141
            E Y AWQ+ Q+ DSS GDE
Sbjct: 352 EENYEAWQDVQDYDSSRGDE 368

The following BLAST results are available for this feature:

BLAST of PI0028181 vs.


Match Name	E-value	Identity	Description

BLAST of PI0028181 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CJ99	1.8e-59	87.86	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold22...	[more]
A0A5A7UQ86	7.2e-53	81.43	RNA-directed DNA polymerase-like protein OS=Cucumis melo var. makuwa OX=1194695 ...	[more]
A0A5A7UR03	1.4e-48	82.84	2-methoxy-6-polyprenyl-1,4-benzoquinol methylase OS=Cucumis melo var. makuwa OX=...	[more]
A0A5D3DBZ2	1.4e-48	82.84	2-methoxy-6-polyprenyl-1,4-benzoquinol methylase OS=Cucumis melo var. makuwa OX=...	[more]
A0A5D3CLX2	3.5e-47	77.14	DExH-box ATP-dependent RNA helicase DExH7 OS=Cucumis melo var. makuwa OX=1194695...	[more]

BLAST of PI0028181 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK11204.1	3.7e-59	87.86	reverse transcriptase [Cucumis melo var. makuwa]	[more]
KAA0057344.1	1.5e-52	81.43	RNA-directed DNA polymerase-like protein [Cucumis melo var. makuwa]	[more]
TYK21018.1	2.9e-48	82.84	2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [Cucumis melo var. makuwa]	[more]
KAA0056746.1	2.9e-48	82.84	2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [Cucumis melo var. makuwa]	[more]
TYK11219.1	7.2e-47	77.14	DExH-box ATP-dependent RNA helicase DExH7 [Cucumis melo var. makuwa]	[more]

BLAST of PI0028181 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25

Position :

Zoom :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 98..121
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..25
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 66..140

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0028181.1	PI0028181.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0032259	methylation
biological_process	GO:0016310	phosphorylation
biological_process	GO:0019538	protein metabolic process
biological_process	GO:0006278	RNA-dependent DNA biosynthetic process
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0140096	catalytic activity, acting on a protein
molecular_function	GO:0004386	helicase activity
molecular_function	GO:0016301	kinase activity
molecular_function	GO:0008168	methyltransferase activity
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0003964	RNA-directed DNA polymerase activity
molecular_function	GO:0008270	zinc ion binding