PI0028114 (gene) Melon (PI 482460) v1

Overview
NamePI0028114
Typegene
OrganismCucumis metuliferus (Melon (PI 482460) v1)
DescriptionUnknown protein
Locationchr10: 19949889 .. 19951452 (+)
RNA-Seq ExpressionPI0028114
SyntenyPI0028114
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGATGCTCATTCATTTCAGTAGGTAAGGTAGACCATCTTAATAACATTTATCTTTTAAAAATTGAAAAGTCATTCTCTACCTTCAATCTTCTTTTTTATTTTTTTTACGAGATTTAACCTTAGATTTCGAGGTTAATATTACAAATTTATGTCGGTTGGACTATGTTTTCGTTCATATCTTTTTTGTTTTTACTTACATAATACACATTTTACGTGGATAAATGGTTTTCGGTCGAATATTATTTTATTAGAATCTTTTTTTTCTTGCTAATTCAAATTGGCAGCCTATCTATGATTATGACATTGGACTAGTATTATATGTCTCGATGTTGTTTTATGTTTCTCATGACTGTTCCTATAATTATAGTAAATTTTATGGAATCACAGATGTTGGTACATAAACTCTATATAACTATAGATATAAAAATAAAATAAATTTTTGTTTTCTTTTACTAAATTTATATACTAAAATAAACAATCTTAAATATTTTGAGGCCCAATTAAAACAAACTTAATTGTTAAGTTACTAAAATAGAGCTTTCAAAACGTAGATACTAAAATATAATAAACGTTGCTTAACATCTTAATTTCTTTTCTTTTATGGATCAAATTTAATACATACCTTTAAAATTTAAAATTAAGGTATCCAATTTTGAATTTAGCTGTGAGGTTGATTTTATCAAAATTGATTAAATATTAATTCTATAATAAAACACTATTTTGATTCTCATCAAATTTGTTCAATTCTTGTCTCTATATTTTTTATTGTCCAATTTAAACTCATGTACTTTCAACAAATTAATTTTTACCAAAATTGGTTAAATAATAACAATCATTTTCATACAAGAAAATAAAAGAGTGAATATGTTCTCAAAAGTTTATGGTAAAAATAATATAAACAATATAAAATTTAAAAAATGAACTATAAACTAACATTGGATCATGGATGGGTGGAAAAATATATAGATTAAAATTATTTATTTTGAAGCTTTATCAATAATTTTTCATTAAGAATTATAAGAAAATAAAAAGGTGAAATTCGTCAAGAAAAAATAAAATAAAATAGAATTTTGAGTTGCAACCTACACCGAACGGGGTCCCTTTCACTCAACAGAAATCCTGCCACTGCCCACTCCTTCGCAAAGCTTTTGCGTATGTTTTCCATTTTCTTCTTCAATTTTTCTGTTTACACCTTCCTTTCTCCGATCCTTCTCCTACCTGAGACCTGCTGACCACCGCACCGCCAATCTTCTCCCGGTTTGTTCTGTTCTGATCCTTAACTCTCTGATGGGTTTTATCAATTCTATTCCAAACTGCATTCTTTCGTCTGATTTCGGAAACTACCGTGTTTGCTCCTTTCAACTTTTCAACTTTAATCAAACCCTTTTCGAATTTTTTCTTCACTTTATGAAATGGGTTTGTAATTCGTCTATCGCTTGTTGAAAAGAAATGTTTGGTTTTGTTTCTTGGAATTTTTGTTTTCTTGTTTTTCCGAAATGCCCGGGTATAATAACAGGTTCTCATCTTGTTTCTTTTGTCTTGATTGCAGATAAAGAGCTAA

mRNA sequence

ATGAGATGCTCATTCATTTCAGTAGTTGCAACCTACACCGAACGGGGTCCCTTTCACTCAACAGAAATCCTGCCACTGCCCACTCCTTCGCAAAGCTTTTGCGTATGTTTTCCATTTTCTTCTTCAATTTTTCTGTTTACACCTTCCTTTCTCCGATCCTTCTCCTACCTGAGACCTGCTGACCACCGCACCGCCAATCTTCTCCCGATAAAGAGCTAA

Coding sequence (CDS)

ATGAGATGCTCATTCATTTCAGTAGTTGCAACCTACACCGAACGGGGTCCCTTTCACTCAACAGAAATCCTGCCACTGCCCACTCCTTCGCAAAGCTTTTGCGTATGTTTTCCATTTTCTTCTTCAATTTTTCTGTTTACACCTTCCTTTCTCCGATCCTTCTCCTACCTGAGACCTGCTGACCACCGCACCGCCAATCTTCTCCCGATAAAGAGCTAA

Protein sequence

MRCSFISVVATYTERGPFHSTEILPLPTPSQSFCVCFPFSSSIFLFTPSFLRSFSYLRPADHRTANLLPIKS
Homology
[Close]
BLAST of PI0028114 vs. NCBI nr
Match: KAE8648782.1 (hypothetical protein Csa_008254, partial [Cucumis sativus])

HSP 1 Score: 83.2 bits (204), Expect = 1.0e-12
Identity = 41/47 (87.23%), Postives = 41/47 (87.23%), Query Frame = 0 

Query: 22 EILPLPTPSQSFCVCFPFSSSIFLFTPSFLRSFSYLRPADHRTANLL 69
          E LPLPTPSQSFCV FPFSSSIFLFTPSFLRSFSYLRPAD  T  LL
Sbjct: 20 ETLPLPTPSQSFCVYFPFSSSIFLFTPSFLRSFSYLRPADPHTVTLL 66

The following BLAST results are available for this feature:
BLAST of PI0028114 vs.
Match NameE-valueIdentityDescription
BLAST of PI0028114 vs.
Match NameE-valueIdentityDescription
BLAST of PI0028114 vs. NCBI nr
Match NameE-valueIdentityDescription
KAE8648782.11.0e-1287.23hypothetical protein Csa_008254, partial [Cucumis sativus][more]
BLAST of PI0028114 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
PI0028114.1PI0028114.1mRNA