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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. ATGTACTTAAACTGCGTCGTATTGAAGCAAAATATTACACGTAGGGTACACACGTGCGGTGTGACATTGGGGTTAAACCATAGGCATCGCAATTCTTCCAAACGAGCGCTCAATCCCGCCGCTTATGGCCAACAGCAGCCGCTACGATCCGACCCGCACCCGATATTTCGTCTCAGAATTGGCCCGATTTTTCCCAATTTCCCCTTCTGGGTTCGTGATTTTCCAACTTTTCTCCTCTGAAAACTCCATCTTTTCAATCTAGATTTCTGGGTGGTTACAAGTTTTCATTTATATAAATTAGTAAGATAATCGAAATGAATGGAATGGAGTATAGAGCTTTGAAGTTTAGTAAAGGGAAAATTCTCTCAATTACTTCAAGTTGTTTCTTTTCTTGGTCTTGCATCTTTCTGGGTACTACTATCTTGCTTTTGCATCTGTTATTTGATGCAGCTTTTTTTGCATTTACATTTATCAAATTACAGTTTGTTCCCCTTCTTTTGATGTTAGGGTACGATTTTATGAATTATGCTCTCGTTTATATATATCAAATTTCCCTCGTTTTGTTTTTGTGATTGTACTTCTTCTGGTTCTGGCACATTGGTTTTCTTTTTCTTTTTCTTTTTCTTTTTCTTTTTGGTTCTTTTGTTTTTGGTTTTTTTTCTTTAAAGAATAAGAATTAGGAGAAAGTATTTGATTTCTTTCCTTTCTTTCTTGATTTTAGGGTTCGATTATGTGGACTCATTTGGTTTTTTTTATTTGTTGGAGACTGATCTTTTTTCACAATTTCAACCGTAGATAAGAAAAAGAAGAAATTCATAGGTGGAAGTAATTCTTAGATCTCAATTTTCAAAAGTAAAGAACCAAAACTAAGGTCCGTTTAAGAACCATTTTGTTTTTGGTCTTGTGCTTTTGAAAATTATGTTTGTTTCCATACAGTTCTTTGGTATATGTTTCCCACCTTCCTTGAACACACATTTTGAATTTTAAGCAAAATATCAATTACAAAGTCTAAGTTTTCATAATTTACTTTTTATTCTTTTTTAAAATTTGGCTGGGTTTTTTATTACATATTTTGAAAGTAGGTAATAAATCAAGAAAACTAGAGGCAGAGAAGTAATGTTTATAAGCTTTGGTTATCAATAAAGCTTAAGCTTTTGGGTGTCCGTTTTGCGGTTAATATTTAAACAGTTTAGAGTATCAAACAGTGAACTTTGTATGTGTATGGTTTGGACTGCTTTCCTTGATTGTGTTTGATCTGATAAACTTGAAATGGTTAAAAACAAATGGAGACTTGCAGTCTTGCTTGAAATGTTGCCTAGTTCTGATAAATTTATGTTTGTTTATTTGATCCAGTATATTCACACTTGGTGA mRNA sequence ATGTACTTAAACTGCGTCGTATTGAAGCAAAATATTACACGTAGGGTACACACGTGCGGTGTGACATTGGGGTTAAACCATAGGCATCGCAATTCTTCCAAACGAGCGCTCAATCCCGCCGCTTATGGCCAACAGCAGCCGCTACGATCCGACCCGCACCCGATATTTCGTCTCAGAATTGGCCCGATTTTTCCCAATTTCCCCTTCTGGTATATTCACACTTGGTGA Coding sequence (CDS) ATGTACTTAAACTGCGTCGTATTGAAGCAAAATATTACACGTAGGGTACACACGTGCGGTGTGACATTGGGGTTAAACCATAGGCATCGCAATTCTTCCAAACGAGCGCTCAATCCCGCCGCTTATGGCCAACAGCAGCCGCTACGATCCGACCCGCACCCGATATTTCGTCTCAGAATTGGCCCGATTTTTCCCAATTTCCCCTTCTGGTATATTCACACTTGGTGA Protein sequence MYLNCVVLKQNITRRVHTCGVTLGLNHRHRNSSKRALNPAAYGQQQPLRSDPHPIFRLRIGPIFPNFPFWYIHTW
Homology
BLAST of PI0028044 vs. ExPASy TrEMBL
Match: A0A0A0K7L2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G008610 PE=4 SV=1) HSP 1 Score: 116.3 bits (290), Expect = 5.5e-23 Identity = 52/55 (94.55%), Postives = 53/55 (96.36%), Query Frame = 0 Query: 16 VHTCGVTLGLNHRHRNSSKRALNPAAYGQQQPLRSDPHPIFRLRIGPIFPNFPFW 71 VHTCGVTLGLNHRHRNSSKRALNPAAYGQQQPLRSDPHPIFRL I PIFP+FPFW Sbjct: 18 VHTCGVTLGLNHRHRNSSKRALNPAAYGQQQPLRSDPHPIFRLTIAPIFPHFPFW 72
BLAST of PI0028044 vs. NCBI nr
Match: KAE8646556.1 (hypothetical protein Csa_023591, partial [Cucumis sativus]) HSP 1 Score: 129.4 bits (324), Expect = 1.3e-26 Identity = 57/60 (95.00%), Postives = 58/60 (96.67%), Query Frame = 0 Query: 16 VHTCGVTLGLNHRHRNSSKRALNPAAYGQQQPLRSDPHPIFRLRIGPIFPNFPFWYIHTW 75 VHTCGVTLGLNHRHRNSSKRALNPAAYGQQQPLRSDPHPIFRL I PIFP+FPFWYIHTW Sbjct: 4 VHTCGVTLGLNHRHRNSSKRALNPAAYGQQQPLRSDPHPIFRLTIAPIFPHFPFWYIHTW 63
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A0A0K7L2 | 5.5e-23 | 94.55 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G008610 PE=4 SV=1 | [more] |
Match Name | E-value | Identity | Description | |
KAE8646556.1 | 1.3e-26 | 95.00 | hypothetical protein Csa_023591, partial [Cucumis sativus] | [more] |
Match Name | E-value | Identity | Description | |
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25
IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 30..49 |
Relationships
The following mRNA feature(s) are a part of this gene:
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