PI0028018 (gene) Melon (PI 482460) v1

Overview
NamePI0028018
Typegene
OrganismCucumis metuliferus (Melon (PI 482460) v1)
DescriptionUnknown protein
Locationchr11: 25327142 .. 25327523 (+)
RNA-Seq ExpressionPI0028018
SyntenyPI0028018
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CTTTTTGGCTCCCCATTATTATTGATTCTTTTAGCTCTTGGGAAACTATGTTCAAGGTTAGGAGCTTTGGCATAGCTCTTATTATGATTTTAATGGCTATCCCAAACTTTGCTCTTTTGGCCGATAGTAGAATGCTCCGATCAGAGGCCGAGCGTGACGGTGTTAAGGAACATGATGTAGATGAAAAGCCAAAGAGCGTAACACCACAACTGAAAGCTGATTCGAGCAGTAGTGGCGATCGAGTTTTTACGTTGGCTTCAGGACCAAGCAGGAAGGGCGGCGGCCATTAGTCAGAAATGTTCTATACCATGTTGATTTTGGCAGAGAATTTGTTGCTCGAATTTATTTTTTCTTATTGGGATTATGTACATGACTTACAAAA

mRNA sequence

CTTTTTGGCTCCCCATTATTATTGATTCTTTTAGCTCTTGGGAAACTATGTTCAAGGTTAGGAGCTTTGGCATAGCTCTTATTATGATTTTAATGGCTATCCCAAACTTTGCTCTTTTGGCCGATAGTAGAATGCTCCGATCAGAGGCCGAGCGTGACGGTGTTAAGGAACATGATGTAGATGAAAAGCCAAAGAGCGTAACACCACAACTGAAAGCTGATTCGAGCAGTAGTGGCGATCGAGTTTTTACGTTGGCTTCAGGACCAAGCAGGAAGGGCGGCGGCCATTAGTCAGAAATGTTCTATACCATGTTGATTTTGGCAGAGAATTTGTTGCTCGAATTTATTTTTTCTTATTGGGATTATGTACATGACTTACAAAA

Coding sequence (CDS)

ATGTTCAAGGTTAGGAGCTTTGGCATAGCTCTTATTATGATTTTAATGGCTATCCCAAACTTTGCTCTTTTGGCCGATAGTAGAATGCTCCGATCAGAGGCCGAGCGTGACGGTGTTAAGGAACATGATGTAGATGAAAAGCCAAAGAGCGTAACACCACAACTGAAAGCTGATTCGAGCAGTAGTGGCGATCGAGTTTTTACGTTGGCTTCAGGACCAAGCAGGAAGGGCGGCGGCCATTAG

Protein sequence

MFKVRSFGIALIMILMAIPNFALLADSRMLRSEAERDGVKEHDVDEKPKSVTPQLKADSSSSGDRVFTLASGPSRKGGGH
Homology
[Close]
BLAST of PI0028018 vs. ExPASy TrEMBL
Match: A0A5A7TI98 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold75G001340 PE=4 SV=1)

HSP 1 Score: 123.2 bits (308), Expect = 4.8e-25
Identity = 68/80 (85.00%), Postives = 72/80 (90.00%), Query Frame = 0 

Query: 1  MFKVRSFGIALIMILMAIPNFALLADSRMLRSEAERDGVKEHDVDEKPKSVTPQLKADSS 60
          MFKVRS GIALIMILMAIPNFA+ A+SRMLRSEAE DGVKEHDVDEKPK + PQ K DSS
Sbjct: 1  MFKVRSLGIALIMILMAIPNFAIFAESRMLRSEAEGDGVKEHDVDEKPKRLIPQPK-DSS 60

Query: 61 SSGDRVFTLASGPSRKGGGH 81
          SSG+RV TLASGPSRKGGGH
Sbjct: 61 SSGNRVVTLASGPSRKGGGH 79

[Close]
BLAST of PI0028018 vs. ExPASy TrEMBL
Match: A0A5D3BTU1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold38G00040 PE=4 SV=1)

HSP 1 Score: 120.6 bits (301), Expect = 3.1e-24
Identity = 67/80 (83.75%), Postives = 71/80 (88.75%), Query Frame = 0 

Query: 1  MFKVRSFGIALIMILMAIPNFALLADSRMLRSEAERDGVKEHDVDEKPKSVTPQLKADSS 60
          MFKV S GIALIMILMAIPNFA+ A+SRMLRSEAE DGVKEHDVDEKPK + PQ K DSS
Sbjct: 1  MFKVGSLGIALIMILMAIPNFAIFAESRMLRSEAEGDGVKEHDVDEKPKRLIPQPK-DSS 60

Query: 61 SSGDRVFTLASGPSRKGGGH 81
          SSG+RV TLASGPSRKGGGH
Sbjct: 61 SSGNRVVTLASGPSRKGGGH 79

[Close]
BLAST of PI0028018 vs. NCBI nr
Match: KAE8652345.1 (hypothetical protein Csa_022541, partial [Cucumis sativus])

HSP 1 Score: 124.0 bits (310), Expect = 5.8e-25
Identity = 70/81 (86.42%), Postives = 74/81 (91.36%), Query Frame = 0 

Query: 1   MFKVRSFGIALIMILMAIPNFALLADSRMLRSEAERDGVKEHDVD-EKPKSVTPQLKADS 60
           MFK+RSFGIALIMILMAIPNFA+ A+SRMLRSEAER  VKEHDVD EKPK +TPQ K DS
Sbjct: 21  MFKLRSFGIALIMILMAIPNFAIFANSRMLRSEAERGSVKEHDVDQEKPKRLTPQPK-DS 80

Query: 61  SSSGDRVFTLASGPSRKGGGH 81
           SSSGDRVFTLASGPSRKGGGH
Sbjct: 81  SSSGDRVFTLASGPSRKGGGH 100

[Close]
BLAST of PI0028018 vs. NCBI nr
Match: KAA0043050.1 (uncharacterized protein E6C27_scaffold75G001340 [Cucumis melo var. makuwa])

HSP 1 Score: 123.2 bits (308), Expect = 9.8e-25
Identity = 68/80 (85.00%), Postives = 72/80 (90.00%), Query Frame = 0 

Query: 1  MFKVRSFGIALIMILMAIPNFALLADSRMLRSEAERDGVKEHDVDEKPKSVTPQLKADSS 60
          MFKVRS GIALIMILMAIPNFA+ A+SRMLRSEAE DGVKEHDVDEKPK + PQ K DSS
Sbjct: 1  MFKVRSLGIALIMILMAIPNFAIFAESRMLRSEAEGDGVKEHDVDEKPKRLIPQPK-DSS 60

Query: 61 SSGDRVFTLASGPSRKGGGH 81
          SSG+RV TLASGPSRKGGGH
Sbjct: 61 SSGNRVVTLASGPSRKGGGH 79

[Close]
BLAST of PI0028018 vs. NCBI nr
Match: TYK01636.1 (uncharacterized protein E5676_scaffold38G00040 [Cucumis melo var. makuwa])

HSP 1 Score: 120.6 bits (301), Expect = 6.4e-24
Identity = 67/80 (83.75%), Postives = 71/80 (88.75%), Query Frame = 0 

Query: 1  MFKVRSFGIALIMILMAIPNFALLADSRMLRSEAERDGVKEHDVDEKPKSVTPQLKADSS 60
          MFKV S GIALIMILMAIPNFA+ A+SRMLRSEAE DGVKEHDVDEKPK + PQ K DSS
Sbjct: 1  MFKVGSLGIALIMILMAIPNFAIFAESRMLRSEAEGDGVKEHDVDEKPKRLIPQPK-DSS 60

Query: 61 SSGDRVFTLASGPSRKGGGH 81
          SSG+RV TLASGPSRKGGGH
Sbjct: 61 SSGNRVVTLASGPSRKGGGH 79

The following BLAST results are available for this feature:
BLAST of PI0028018 vs.
Match NameE-valueIdentityDescription
BLAST of PI0028018 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7TI984.8e-2585.00Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5D3BTU13.1e-2483.75Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
BLAST of PI0028018 vs. NCBI nr
Match NameE-valueIdentityDescription
KAE8652345.15.8e-2586.42hypothetical protein Csa_022541, partial [Cucumis sativus][more]
KAA0043050.19.8e-2585.00uncharacterized protein E6C27_scaffold75G001340 [Cucumis melo var. makuwa][more]
TYK01636.16.4e-2483.75uncharacterized protein E5676_scaffold38G00040 [Cucumis melo var. makuwa][more]
BLAST of PI0028018 vs. NCBI nr
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 34..52
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 34..80
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 53..68

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
PI0028018.1PI0028018.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane