Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTGGTCAAGGTGACCATCGCGGGGAAGCATTTGGCTCCCACACGAGGTACTACAACAACAGACCACAACATTCCCAACATCAACTGCAACACACCATCACTACTTTATCCACTTCTTCATCTATTGAAAACCTCCTCCGCGAGTACATGCAGAAGAATGATATCCTTCTGCAAAACCAAGCTTCATCAATTCGCAATCTGTAGGCGCAAGTTGGGGCAGTTGGCCAACGATTTCTCTAGAAGGCCCCAAGGATCTCTCCCAAGCAATACGGAAATGCCAAATCAGGCGGGAGGATCTGAAAAAGAGAAGTGTCACACGGTGACACTACGAAGCAAAAGGAATTTGACCATCCGCGATCCTGAATCTGAATGTAGCATTCCCACTTCTCATTCTACTGTCGAGATTGACAGCTCAAGTAACAATTTTAATCCTGTGAATTTCTCTTTAACTGATAATGTTTCTTCCTGTCAGAATAAAGATGTACCAAACAAGGGCGTGAAGAGCATGGGGCAACGAGAACAACGGGGTGAAGCGTCTCAACAGGCGACAAGCTCAGAACCTTTACCGCCTCCTCCATTTCTTGGTCGCCTTAAGAAGAAAGGAGATGAACAACAGTTTCACAAATTTTTGGACGTCTTAAAGCTGCTTCATATTAATATCCTGTTTGTTGATGCGTTAGAGCGGATGCCTACATATGTCAAGTTCCTAAAAGACATCTTGGCAAAGAAACGAAGGATGAATGATTGCGAAACAGTGGCTCTAACGTAGGCACAAGTGATGTCTTCAAAAATGGGGTACCCGAGAAAATGACAGATCTTGGTAGCTTCACAGTACCTTGCTCAATAGGCGGAATGGATCTAGGTCGTGCATTATGCGATCTGGGAGCCAACATTAATTTGATGCCTCTTTCTATCTTCAAGAAATAACCTTCATGAGGCTTCAATTCGCTGATAGATTCATTGCAACGTTTGGAGGAAAAATTGAAGATGTTTTGGTGAAGGTGGAGAAATTTTTGTTTCCCGGTGACTTCGTCATTCTGGATTACGAAGTGGATCAGAAGGTTCCAATTATTTTGGGGCGGCCTTTCCTGTCAACTGGTCGCGCCCTCATAGATGTCCACCAAGGGGAGTTGACAATGCGCTTTAATAACAAAGAAATCAAATTCAACGTTGTCAACGCGATGAAGTTCCCCTATGATGAAGAAAGCTGCAATGCAATAGAATCCTTGGGATGA
mRNA sequence
ATGGTGGTCAAGGTGACCATCGCGGGGAAGCATTTGGCTCCCACACGAGGTACTACAACAACAGACCACAACATTCCCAACATCAACTGCAACACACCATCACTACTTTATCCACTTCTTCATCTATTGAAAACCTCCTCCGCGAGTACATGCAGAAGAATGATATCCTTCTGCAAAACCAAGCTTCATCAATTCGCAATCTGTAGGCGCAAGTTGGGGCAGTTGGCCAACGATTTCTCTAGAAGGCCCCAAGGATCTCTCCCAAGCAATACGGAAATGCCAAATCAGGCGGGAGGATCTGAAAAAGAGAAGTGTCACACGGTGACACTACGAAGCAAAAGGAATTTGACCATCCGCGATCCTGAATCTGAATGTAGCATTCCCACTTCTCATTCTACTGTCGAGATTGACAGCTCAAGTAACAATTTTAATCCTGTGAATTTCTCTTTAACTGATAATGTTTCTTCCTGTCAGAATAAAGATGTACCAAACAAGGGCGTGAAGAGCATGGGGCAACGAGAACAACGGGGTGAAGCGTCTCAACAGGCGACAAGCTCAGAACCTTTACCGCCTCCTCCATTTCTTGGTCGCCTTAAGAAGAAAGGAGATGAACAACAGTTTCACAAATTTTTGGACGTCTTAAAGCTGCTTCATATTAATATCCTGTTTGTTGATGCGTTAGAGCGGATGCCTACATATGTCAAGTTCCTAAAAGACATCTTGGCAAAGAAACGAAGGATGAATGATTGCGAAACAGTGGCTCTAACATTCATTGCAACGTTTGGAGGAAAAATTGAAGATGTTTTGGTGAAGGTGGAGAAATTTTTGTTTCCCGGTGACTTCGTCATTCTGGATTACGAAGTGGATCAGAAGGTTCCAATTATTTTGGGGCGGCCTTTCCTGTCAACTGGTCGCGCCCTCATAGATGTCCACCAAGGGGAGTTGACAATGCGCTTTAATAACAAAGAAATCAAATTCAACGTTGTCAACGCGATGAAGTTCCCCTATGATGAAGAAAGCTGCAATGCAATAGAATCCTTGGGATGA
Coding sequence (CDS)
ATGGTGGTCAAGGTGACCATCGCGGGGAAGCATTTGGCTCCCACACGAGGTACTACAACAACAGACCACAACATTCCCAACATCAACTGCAACACACCATCACTACTTTATCCACTTCTTCATCTATTGAAAACCTCCTCCGCGAGTACATGCAGAAGAATGATATCCTTCTGCAAAACCAAGCTTCATCAATTCGCAATCTGTAGGCGCAAGTTGGGGCAGTTGGCCAACGATTTCTCTAGAAGGCCCCAAGGATCTCTCCCAAGCAATACGGAAATGCCAAATCAGGCGGGAGGATCTGAAAAAGAGAAGTGTCACACGGTGACACTACGAAGCAAAAGGAATTTGACCATCCGCGATCCTGAATCTGAATGTAGCATTCCCACTTCTCATTCTACTGTCGAGATTGACAGCTCAAGTAACAATTTTAATCCTGTGAATTTCTCTTTAACTGATAATGTTTCTTCCTGTCAGAATAAAGATGTACCAAACAAGGGCGTGAAGAGCATGGGGCAACGAGAACAACGGGGTGAAGCGTCTCAACAGGCGACAAGCTCAGAACCTTTACCGCCTCCTCCATTTCTTGGTCGCCTTAAGAAGAAAGGAGATGAACAACAGTTTCACAAATTTTTGGACGTCTTAAAGCTGCTTCATATTAATATCCTGTTTGTTGATGCGTTAGAGCGGATGCCTACATATGTCAAGTTCCTAAAAGACATCTTGGCAAAGAAACGAAGGATGAATGATTGCGAAACAGTGGCTCTAACATTCATTGCAACGTTTGGAGGAAAAATTGAAGATGTTTTGGTGAAGGTGGAGAAATTTTTGTTTCCCGGTGACTTCGTCATTCTGGATTACGAAGTGGATCAGAAGGTTCCAATTATTTTGGGGCGGCCTTTCCTGTCAACTGGTCGCGCCCTCATAGATGTCCACCAAGGGGAGTTGACAATGCGCTTTAATAACAAAGAAATCAAATTCAACGTTGTCAACGCGATGAAGTTCCCCTATGATGAAGAAAGCTGCAATGCAATAGAATCCTTGGGATGA
Protein sequence
MVVKVTIAGKHLAPTRGTTTTDHNIPNINCNTPSLLYPLLHLLKTSSASTCRRMISFCKTKLHQFAICRRKLGQLANDFSRRPQGSLPSNTEMPNQAGGSEKEKCHTVTLRSKRNLTIRDPESECSIPTSHSTVEIDSSSNNFNPVNFSLTDNVSSCQNKDVPNKGVKSMGQREQRGEASQQATSSEPLPPPPFLGRLKKKGDEQQFHKFLDVLKLLHINILFVDALERMPTYVKFLKDILAKKRRMNDCETVALTFIATFGGKIEDVLVKVEKFLFPGDFVILDYEVDQKVPIILGRPFLSTGRALIDVHQGELTMRFNNKEIKFNVVNAMKFPYDEESCNAIESLG
Homology
BLAST of PI0028015 vs. ExPASy TrEMBL
Match:
A0A5A7TXP8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold243G005880 PE=4 SV=1)
HSP 1 Score: 204.1 bits (518), Expect = 9.2e-49
Identity = 121/226 (53.54%), Postives = 145/226 (64.16%), Query Frame = 0
Query: 155 SSCQNKDVPNKGVKSMGQREQRGEASQQATSSEPLPPPPFLGRLKKKGDEQQFHKFLDVL 214
S N NK V+S Q E+ +A TSS P+PP PF RL+K GDE+Q K+LDVL
Sbjct: 40 SGVNNNVEKNKEVESTRQDEEYSKAFNHKTSSHPIPPTPFPSRLEKIGDEKQSKKYLDVL 99
Query: 215 KLLHINILFVDALERMPTYVKFLKDILAKKRRMNDCETVAL------------------- 274
K LHINI FVDALE+MP+YVKFLKDIL KKRRMN E VAL
Sbjct: 100 KELHINISFVDALEQMPSYVKFLKDILTKKRRMNHYEIVALSQATRDVFNNGALDKMTDP 159
Query: 275 -TFI------------ATFGGKIEDVLVKVEKFLFPGDFVILDYEVDQKVPIILGRPFLS 334
+FI A GKIE VLVK++KFLF +F+ILD E D II RPFLS
Sbjct: 160 RSFIIPCSIGGMDLDPAWPEGKIEVVLVKMDKFLFLINFIILDNEADWDFSIIWERPFLS 219
Query: 335 TGRALIDVHQGELTMRFNNKEIKFNVVNAMKFPYDEESCNAIESLG 349
T RALI++HQGELTM+ N++E+ FN+VNA+KFP D E+C+AIESLG
Sbjct: 220 TSRALINIHQGELTMQLNDQEVTFNIVNAIKFPSDAENCSAIESLG 265
BLAST of PI0028015 vs. ExPASy TrEMBL
Match:
A0A5A7TGS2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold32G00540 PE=4 SV=1)
HSP 1 Score: 196.1 bits (497), Expect = 2.5e-46
Identity = 125/283 (44.17%), Postives = 162/283 (57.24%), Query Frame = 0
Query: 71 KLGQLANDFSRRPQGSLPSNTEMPNQAGGSEKEKCHTVTLRSKRNLTIRDPESECSIPTS 130
+LGQL ++ SRRP+GSLPSNTE PNQ GGS KEKC VTLRS+RNLTIR+P+ E TS
Sbjct: 44 QLGQLFSNISRRPKGSLPSNTETPNQVGGSGKEKCQVVTLRSRRNLTIREPKFERRNSTS 103
Query: 131 HSTVEIDSSSNNFNPVNFSLTDNVSSCQNKDVPNKGVKSMGQREQRGEASQQATSSEPLP 190
ST +I S+SN+ NP+N SLT+N SS QNK++PNK V+S + EQR E S + TSS PL
Sbjct: 104 TSTTKIGSASNDSNPLNSSLTNNTSSLQNKNIPNKEVESTRREEQRDEESHETTSSNPLS 163
Query: 191 PPPFLGRLKKKGDEQQFHKFLDVLKLLHINILFVDALERMPTYVKFLKDILAKKRRMNDC 250
PPFLG LKK+ F K+ + +KR
Sbjct: 164 SPPFLGHLKKRATSNIF------------------------------KNGVPEKRTGPGS 223
Query: 251 ETVALTFIATFGGKIE------DVLVKVEKFLFPGDFVILDYEVDQKVPIILGRPFLSTG 310
T+ + G+I+ D+ + + E+ + P + R FLST
Sbjct: 224 FTIPCSI-----GEIDLSCALYDLRASINLMSLS---IFKKLEIREVQPTHMRRSFLSTS 283
Query: 311 RALIDVHQGELTMRFNNKEIKFNVVNAMKFPYDEESCNAIESL 348
+ LIDVH GEL+MRFNN+EIKFNVVN +KF D E+ AI+ L
Sbjct: 284 QDLIDVHHGELSMRFNNEEIKFNVVNELKFSIDVENYKAIKFL 288
BLAST of PI0028015 vs. ExPASy TrEMBL
Match:
A0A2G9HYA0 (Reverse transcriptase OS=Handroanthus impetiginosus OX=429701 GN=CDL12_04802 PE=4 SV=1)
HSP 1 Score: 193.4 bits (490), Expect = 1.6e-45
Identity = 138/363 (38.02%), Postives = 175/363 (48.21%), Query Frame = 0
Query: 54 MISFCKTKLHQFAICRRKLGQLANDFSRRPQGSLPSNTE-MPNQAGGSEKEKCHTVTLRS 113
+I F + F ++GQLAN + RPQGSLPSNTE P Q G K +C VTLR+
Sbjct: 213 LIQFMASTAANFKTMETQIGQLANAINSRPQGSLPSNTEPNPRQDG---KAQCQAVTLRN 272
Query: 114 KRNLTIRDPESECSIPTSHSTVEIDSSSNNFNPVNFSLTDNVSSCQNKDVPNKGVKSMGQ 173
R L + PT E+ S +
Sbjct: 273 GREL-----QEVVKEPTKSKEKEVISE--------------------------------E 332
Query: 174 REQRGEASQQATSSEPLPPPPFLGRLKKKGDEQQFHKFLDVLKLLHINILFVDALERMPT 233
+E+ EA + + L PPF RL+K+ E+QF KFL+V K LHINI F +ALE+MP+
Sbjct: 333 KEKEVEAPLEVSKPTTL-QPPFPQRLQKQKLEKQFLKFLEVFKKLHINIPFAEALEQMPS 392
Query: 234 YVKFLKDILAKKRRMNDCETVALT------------------------------------ 293
YVKF+KDIL+KKRR+ D ETVALT
Sbjct: 393 YVKFMKDILSKKRRLGDYETVALTEECSAIIQNKLPPKLKDPGSFTIPCTIGTHFSGRAL 452
Query: 294 -------------FIATFG----------------------GKIEDVLVKVEKFLFPGDF 345
T G G IED+LVKV+KF+FP DF
Sbjct: 453 CDLGASINLMPYSIYRTLGLGEAKPTSITLQLADRSLTYPKGVIEDILVKVDKFIFPADF 512
BLAST of PI0028015 vs. ExPASy TrEMBL
Match:
A0A2G9GK35 (Reverse transcriptase OS=Handroanthus impetiginosus OX=429701 GN=CDL12_21798 PE=4 SV=1)
HSP 1 Score: 192.2 bits (487), Expect = 3.6e-45
Identity = 138/363 (38.02%), Postives = 175/363 (48.21%), Query Frame = 0
Query: 54 MISFCKTKLHQFAICRRKLGQLANDFSRRPQGSLPSNTE-MPNQAGGSEKEKCHTVTLRS 113
+I F + F ++GQLAN + RPQGSLPSNTE P Q G K +C VTLR+
Sbjct: 213 LIQFMASTAANFKTMETQIGQLANAINSRPQGSLPSNTEPNPRQDG---KAQCQAVTLRN 272
Query: 114 KRNLTIRDPESECSIPTSHSTVEIDSSSNNFNPVNFSLTDNVSSCQNKDVPNKGVKSMGQ 173
R L + PT E+ S +
Sbjct: 273 GREL-----QEVVKEPTKSKEKEVISE--------------------------------E 332
Query: 174 REQRGEASQQATSSEPLPPPPFLGRLKKKGDEQQFHKFLDVLKLLHINILFVDALERMPT 233
+E+ EA + + L PPF RL+K+ E+QF KFL+V K LHINI F +ALE+MP+
Sbjct: 333 KEKEVEAPLEVSKPTTL-QPPFPQRLQKQKLEKQFLKFLEVFKKLHINIPFAEALEQMPS 392
Query: 234 YVKFLKDILAKKRRMNDCETVALT------------------------------------ 293
YVKF+KDIL+KKRR+ D ETVALT
Sbjct: 393 YVKFMKDILSKKRRLGDYETVALTEECSAIIQNKLPPKLKDPGSFTIPCTIGTHFSGRAL 452
Query: 294 -------------FIATFG----------------------GKIEDVLVKVEKFLFPGDF 345
T G G IED+LVKV+KF+FP DF
Sbjct: 453 CDLGASINLMPYSIYRTLGLGEAKPTSITLQLADRSLTYPKGVIEDILVKVDKFIFPADF 512
BLAST of PI0028015 vs. ExPASy TrEMBL
Match:
A0A5A7VJ95 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold2484G00710 PE=4 SV=1)
HSP 1 Score: 191.0 bits (484), Expect = 8.1e-45
Identity = 117/253 (46.25%), Postives = 142/253 (56.13%), Query Frame = 0
Query: 167 VKSMGQREQRGEASQQATSSEPLPPPPFLGRLKKKGDEQQFHKFLDVLKLLHINILFVDA 226
++S + EQ +AS + TSS PLPPPPF LKKKG+++ F+K L+VLK +HINILF+DA
Sbjct: 27 MESTWRDEQCDDASIKVTSSNPLPPPPFPSFLKKKGNDKPFYKLLEVLKQIHINILFIDA 86
Query: 227 LERMPTYVKFLKDILAKKRRMNDCETVALTF----------------------------- 286
LE+M AKK R NDCETVALT
Sbjct: 87 LEQM-----------AKKGRNNDCETVALTLETSDILKNGAPKKMTDCRSFTVPCSINNM 146
Query: 287 ------------------------------------------IATFGGKIEDVLVKVEKF 346
IA GKIED+LVKV+KF
Sbjct: 147 DLGHVLCDLGASINLMPLSIFKKLEIEEVQPMHMRLQFVDRSIAKHEGKIEDILVKVDKF 206
Query: 347 LFPGDFVILDYEVDQKVPIILGRPFLSTGRALIDVHQGELTMRFNNKEIKFNVVNAMKFP 349
LF DF+ILDYE +Q+VPII GRPFLSTG ALIDVHQGELTMRFN+ E+KFNV+NAMKFP
Sbjct: 207 LFHADFIILDYEANQEVPIIFGRPFLSTGHALIDVHQGELTMRFND-EVKFNVMNAMKFP 266
BLAST of PI0028015 vs. NCBI nr
Match:
XP_030497888.1 (uncharacterized protein LOC115713544 [Cannabis sativa])
HSP 1 Score: 213.8 bits (543), Expect = 2.4e-51
Identity = 136/299 (45.48%), Postives = 174/299 (58.19%), Query Frame = 0
Query: 71 KLGQLANDFSRRPQGSLPSNTEMPNQAGGSEKEKCHTVTLRSKRNLTIRDPESECSIPTS 130
+LGQLAND RPQG+LPS+T+ P + G KE C V LRS + L ES + S
Sbjct: 289 QLGQLANDLKSRPQGTLPSDTKNPRRDG---KEHCKAVALRSGKIL-----ESNVAATGS 348
Query: 131 HSTVEIDSSSNNFNPVNFSLTDNVSSCQNKDVPNKGVKSMGQREQRGEASQQATSSEPLP 190
I + + + V V + GQ ++ Q+ P
Sbjct: 349 KEPSLIQKEG------EMKKKPTILAAEIPPV----VTASGQHSAAEKSLQK-------P 408
Query: 191 PPPFLGRLKKKGDEQQFHKFLDVLKLLHINILFVDALERMPTYVKFLKDILAKKRRMNDC 250
PPPF R KK+ D+ QF +FLDVLK LHINI V+ALE+MPTYVKFLKDIL KKRR+ +
Sbjct: 409 PPPFPLRFKKQQDDGQFWRFLDVLKQLHINIPLVEALEQMPTYVKFLKDILTKKRRLGEF 468
Query: 251 ETVALT-------------------------FIATFGGKIEDVLVKVEKFLFPGDFVILD 310
+TVALT +A GKIEDV V+V+KF+FP DF+ILD
Sbjct: 469 KTVALTEGCSAIKLGIGEARPTTVTLQLVDRSMAHPEGKIEDVFVQVDKFIFPADFIILD 528
Query: 311 YEVDQKVPIILGRPFLSTGRALIDVHQGELTMRFNNKEIKFNVVNAMKFPYDEESCNAI 345
YE D++VPIILGRPFL+TGR LIDV GELTMR N++++ FNV NAM+FP + E C+ +
Sbjct: 529 YEADKEVPIILGRPFLATGRTLIDVQNGELTMRVNDQKVTFNVFNAMRFPDEIEECSGL 562
BLAST of PI0028015 vs. NCBI nr
Match:
XP_030508913.1 (uncharacterized protein LOC115723563 [Cannabis sativa])
HSP 1 Score: 210.7 bits (535), Expect = 2.0e-50
Identity = 138/315 (43.81%), Postives = 183/315 (58.10%), Query Frame = 0
Query: 71 KLGQLANDFSRRPQGSLPSNTEMPNQAGGSEKEKCHTVTLRSKRNLTIRDPES-ECSIPT 130
++GQLAN+ RPQG+LPS+TE P + G KE C V LRS + L + E+ + + PT
Sbjct: 7 QVGQLANELRNRPQGTLPSDTENPRRDG---KEHCKAVILRSGKVLESNEEEAKDKNEPT 66
Query: 131 S-HSTVEIDSSSNNFNPVNFSLTDNVSSCQNKDVPNKGVKSMGQREQRGEASQQATSSEP 190
S S VE N P N + K+ P + ++ + A+++ S
Sbjct: 67 SIQSRVE-----KNVEPSNMA----------KEQPEENAAAIPHQ----NAAEKLLSK-- 126
Query: 191 LPPPPFLGRLKKKGDEQQFHKFLDVLKLLHINILFVDALERMPTYVKFLKDILAKKRRMN 250
PPPPF R KK+ ++ +F +FLDVLK LHI+I V+ALE+M YVKFLKDI KKRR+
Sbjct: 127 -PPPPFPQRFKKQQEDGRFQRFLDVLKQLHISIPLVEALEQMLNYVKFLKDISTKKRRLG 186
Query: 251 DCETVALT--------------------FIATFG-------------------GKIEDVL 310
+ ETVALT F FG GKIEDVL
Sbjct: 187 EFETVALTEGCSAMLKSEIPPKLKDPRSFTIPFGNWPTTVTLQLADRSMAHPEGKIEDVL 246
Query: 311 VKVEKFLFPGDFVILDYEVDQKVPIILGRPFLSTGRALIDVHQGELTMRFNNKEIKFNVV 345
V+V+KF+FP DF+ILDYE D++VPIILGR FL+TGR LIDV +GELTMR N++++ FNV
Sbjct: 247 VQVDKFIFPADFIILDYEADREVPIILGRSFLATGRTLIDVQKGELTMRVNDQQVTFNVF 296
BLAST of PI0028015 vs. NCBI nr
Match:
KAA0046019.1 (hypothetical protein E6C27_scaffold243G005880 [Cucumis melo var. makuwa])
HSP 1 Score: 204.1 bits (518), Expect = 1.9e-48
Identity = 121/226 (53.54%), Postives = 145/226 (64.16%), Query Frame = 0
Query: 155 SSCQNKDVPNKGVKSMGQREQRGEASQQATSSEPLPPPPFLGRLKKKGDEQQFHKFLDVL 214
S N NK V+S Q E+ +A TSS P+PP PF RL+K GDE+Q K+LDVL
Sbjct: 40 SGVNNNVEKNKEVESTRQDEEYSKAFNHKTSSHPIPPTPFPSRLEKIGDEKQSKKYLDVL 99
Query: 215 KLLHINILFVDALERMPTYVKFLKDILAKKRRMNDCETVAL------------------- 274
K LHINI FVDALE+MP+YVKFLKDIL KKRRMN E VAL
Sbjct: 100 KELHINISFVDALEQMPSYVKFLKDILTKKRRMNHYEIVALSQATRDVFNNGALDKMTDP 159
Query: 275 -TFI------------ATFGGKIEDVLVKVEKFLFPGDFVILDYEVDQKVPIILGRPFLS 334
+FI A GKIE VLVK++KFLF +F+ILD E D II RPFLS
Sbjct: 160 RSFIIPCSIGGMDLDPAWPEGKIEVVLVKMDKFLFLINFIILDNEADWDFSIIWERPFLS 219
Query: 335 TGRALIDVHQGELTMRFNNKEIKFNVVNAMKFPYDEESCNAIESLG 349
T RALI++HQGELTM+ N++E+ FN+VNA+KFP D E+C+AIESLG
Sbjct: 220 TSRALINIHQGELTMQLNDQEVTFNIVNAIKFPSDAENCSAIESLG 265
BLAST of PI0028015 vs. NCBI nr
Match:
XP_030504828.1 (uncharacterized protein LOC115719782 [Cannabis sativa])
HSP 1 Score: 197.2 bits (500), Expect = 2.3e-46
Identity = 125/279 (44.80%), Postives = 161/279 (57.71%), Query Frame = 0
Query: 71 KLGQLANDFSRRPQGSLPSNTEMPNQAGGSEKEKCHTVTLRSKRNLTIRDPESECSIPTS 130
+LG LAN+ RPQGSLPS+TE P + G KE+C ++ LRS ++L
Sbjct: 21 QLGHLANELKARPQGSLPSDTENPRRDG---KEQCKSIHLRSGKHL-------------K 80
Query: 131 HSTVEIDSSSNNFNPVNFSLTDNVSSCQNKDVPNKGVKSMGQREQRGEASQQATSSEPLP 190
+S EI S P + + + +S ++R S Q S P P
Sbjct: 81 NSEEEIKGSG---EPTSIQIDEKLS------------------KKRPGTSIQTVCSSPKP 140
Query: 191 PPPFLGRLKKKGDEQQFHKFLDVLKLLHINILFVDALERMPTYVKFLKDILAKKRRMNDC 250
P PF R +K+ + QF +FLDVLK LHINI V+ALE+MP YVKFLKDIL KKRR+ +
Sbjct: 141 PLPFPQRFQKQQQDGQFKRFLDVLKQLHINIPLVEALEQMPNYVKFLKDILTKKRRLGEL 200
Query: 251 ETVALT---------------------FIATFGGKIEDVLVKVEKFLFPGDFVILDYEVD 310
ETVALT +A GKIEDVLV+V+KF+ P DF+ILDYE D
Sbjct: 201 ETVALTEGCSAMLKTRPTTVTLQLADRSMAHPDGKIEDVLVQVDKFILPADFIILDYEED 260
Query: 311 QKVPIILGRPFLSTGRALIDVHQGELTMRFNNKEIKFNV 329
++VPIILGRPFL+TGR LIDV +GELTMR +++ F V
Sbjct: 261 REVPIILGRPFLATGRTLIDVEKGELTMRAQDEQATFKV 262
BLAST of PI0028015 vs. NCBI nr
Match:
XP_024949903.1 (uncharacterized protein LOC112496715 [Citrus sinensis])
HSP 1 Score: 196.8 bits (499), Expect = 3.0e-46
Identity = 126/311 (40.51%), Postives = 176/311 (56.59%), Query Frame = 0
Query: 71 KLGQLANDFSRRPQGSLPSNTEMPNQAGGSEKEKCHTVTLRSKRNLTIRDPESECSIPTS 130
++GQLA S RPQGSLPSNTE P + G KE C + LRS R L
Sbjct: 426 QIGQLAAALSNRPQGSLPSNTENPRREG---KEHCKVIDLRSGRRL-------------- 485
Query: 131 HSTVEIDSSSNNFNPVNFSLTDN--VSSCQNKDVPNKGVKSMG------QREQRGEASQQ 190
V++ + +P+ T N ++S ++ D G ++ R + + +Q
Sbjct: 486 --IVQLVYRTEELSPIKAKKTLNSAIASAESYDPAPGGEEATTPTATDLSRAKEKQPAQP 545
Query: 191 ATSSEPLPPPPFLGRLKKKGDEQQFHKFLDVLKLLHINILFVDALERMPTYVKFLKDILA 250
A + + P PF R +K+ ++QF+K L VLK LHINI F++ LE+M Y KFLKDIL
Sbjct: 546 AAAQQFRHPSPFSQRFQKQQQDKQFNKILGVLKQLHINIHFMEVLEQMLNYAKFLKDILT 605
Query: 251 KKRRMNDCETVALT-----------------------------FIATFGGKIEDVLVKVE 310
KKRR+ + ETVA+T A G+I+DVLVKV+
Sbjct: 606 KKRRLREFETVAVTQESSRMLQSKIPQKMKDPPTTVSLQLADRSHAYPEGEIKDVLVKVD 665
Query: 311 KFLFPGDFVILDYEVDQKVPIILGRPFLSTGRALIDVHQGELTMRFNNKEIKFNVVNAMK 345
KF+FP DF++LD+E D++VPIILGRPFL+TG+ LIDV +GELTMR N++++ FNV++ MK
Sbjct: 666 KFIFPVDFIVLDFEADKEVPIILGRPFLATGKTLIDVKKGELTMRVNDQQVTFNVLDVMK 717
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A5A7TXP8 | 9.2e-49 | 53.54 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... | [more] |
A0A5A7TGS2 | 2.5e-46 | 44.17 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
A0A2G9HYA0 | 1.6e-45 | 38.02 | Reverse transcriptase OS=Handroanthus impetiginosus OX=429701 GN=CDL12_04802 PE=... | [more] |
A0A2G9GK35 | 3.6e-45 | 38.02 | Reverse transcriptase OS=Handroanthus impetiginosus OX=429701 GN=CDL12_21798 PE=... | [more] |
A0A5A7VJ95 | 8.1e-45 | 46.25 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... | [more] |
Match Name | E-value | Identity | Description | |