PI0027993 (gene) Melon (PI 482460) v1

Overview


Name	PI0027993
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Glial fibrillary acidic protein-like
Location	chr03: 10931932 .. 10933334 (+)
RNA-Seq Expression	PI0027993
Synteny	PI0027993

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACAGAGACTTTCAGATCACTAAATCATTGTCGAATTCAAGGCAAAGGAAAATTCTTCAATTGTGCTCCTATGCTTTTTATTTGGATTTCTAGACATCTAAGGTGTCCTAATAATTTTGGATACTCTCAAATAAAATTCAGTAGTCCGTGGAATAATGCAAGAAACACTATCAGAGAATTCAATAGTGCACATTGGGATCCAAGTGCTCAAGAATTTCGAGTTTTGATGCATTTTTTCAGCCATTTAACGACAGAGGAGTTAGTCTGGAGAGCTCCTTGGGTGCCCACAAGTCCTTGGACATATCGCTGTGGGAAATTGGCTTTTGTCCCACTATTGGGCCTATGGGGAGGTTTTGCTTACTCTCCTCTTTTGGTACTACGTCAATCATGGTGAAAACAACTCACACCATTTGTATGTGGGCTAGAGGATTGGGAATTCTCATATGAGTCAGGCGTAGCAAATGACAAAATTCATGAAGCAGTTGAGGCATGGAAATTCGAAAAGAAAATAAAGAGCTTGCGACATTGTGAGAGTACTACATAACAATATGATAATTGGAGAGCATCTAGAGATGTGATTAAAGTTAGTGCTATGTCAGAGCCTTTAGTTCCAAGCATAGTGTCAAAGAAAAATCACGACAATGGAGAGAGGGATTTGAAAAGGTTAAGAGAAATGAATTGTGTTTTGGCAATAGAAAACAAAAAGTTGAGAGAAGAAGTCAAAAGATGGGTCCAACAAGCTGTTAGTGCTCAAAGAGATTTGGACGAGGCAAAACGAAAGCAATCAGAGCTGGTGAAGGATAACGATTCTTTAAAAATTGAGGTGATCCAAGTGAGAAAAAAGAATAAGAGATTATTACGGAACATTGTTGACTTGCATGAAGAAACAGAAGCTAAAAAGTATGCATTACAGATTTGAAATAGGAAATAGAAAGATTGAATGGGGTTGCTATAGAATTCCAAAATGCACTACATGAACAAGCCACATCATCTCAAAAGATCACTATAGAGGTCGAGGTTCTACAACAATCAGTTAAAAAATACAAGTTCCAACTTATGGAAGCAAAAAGTACGAACAAATTTCTTCAAGAAGTTGTTAACAGTTTCGAAGGCCAGTTGCTGATATGTTGCAAGGCAAGAGAAGTTGCAATAAATGACTACACCCTTTTAAAAGAAAAATATCAAGAAATGTCAATAGATTTCATGATATGGAAGGACGAGTATAGCATACTGAGACACAAGTATGATGGTGCTAGAGGTTAGATAGAGCAAGGGGCTGAGAAATTAAGACAAATGGCGAGGATGGCAGATCAATTCTCAGTGAAAGCTATGACCCTCCGACAAGGCATTGTACCCACACATGATAGAACAGAGAATTGTCTCGTTTTCTATGGATCATAG

mRNA sequence

ATGACAGAGACTTTCAGATCACTAAATCATTGTCGAATTCAAGGCAAAGGAAAATTCTTCAATTGTGCTCCTATGCTTTTTATTTGGATTTCTAGACATCTAAGGTGTCCTAATAATTTTGGATACTCTCAAATAAAATTCAGTAGTCCGTGGAATAATGCAAGAAACACTATCAGAGAATTCAATAGTGCACATTGGGATCCAAGTGCTCAAGAATTTCGAGTTTTGATGCATTTTTTCAGCCATTTAACGACAGAGGAGTTAGTCTGGAGAGCTCCTTGGGTGCCCACAAGTCCTTGGACATATCGCTGTGGGAAATTGGCTTTTGTCCCACTATTGGGCCTATGGGGAGGTTTTGCTTACTCTCCTCTTTTGGTACTACAGGATTGGGAATTCTCATATGAGTCAGGCGTAGCAAATGACAAAATTCATGAAGCAGTTGAGGCATGGAAATTCGAAAAGAAAATAAAGAGCTTGCGACATTGTGAGAAGCCTTTAGTTCCAAGCATAGTGTCAAAGAAAAATCACGACAATGGAGAGAGGGATTTGAAAAGGTTAAGAGAAATGAATTGTGTTTTGGCAATAGAAAACAAAAAGTTGAGAGAAGAAGTCAAAAGATGGGTCCAACAAGCTGTTAGTGCTCAAAGAGATTTGGACGAGGCAAAACGAAAGCAATCAGAGCTGGTGAAGGATAACGATTCTTTAAAAATTGAGGTGATCCAAGTGAGAAAAAAGAATAAGAGATTATTACGGAACATTGTTGACTTGCATGAAGAAACAGAAGCTAAAAACATACTGAGACACAAGTATGATGGTAAATTAAGACAAATGGCGAGGATGGCAGATCAATTCTCAGTGAAAGCTATGACCCTCCGACAAGGCATTGTACCCACACATGATAGAACAGAGAATTGTCTCGTTTTCTATGGATCATAG

Coding sequence (CDS)

ATGACAGAGACTTTCAGATCACTAAATCATTGTCGAATTCAAGGCAAAGGAAAATTCTTCAATTGTGCTCCTATGCTTTTTATTTGGATTTCTAGACATCTAAGGTGTCCTAATAATTTTGGATACTCTCAAATAAAATTCAGTAGTCCGTGGAATAATGCAAGAAACACTATCAGAGAATTCAATAGTGCACATTGGGATCCAAGTGCTCAAGAATTTCGAGTTTTGATGCATTTTTTCAGCCATTTAACGACAGAGGAGTTAGTCTGGAGAGCTCCTTGGGTGCCCACAAGTCCTTGGACATATCGCTGTGGGAAATTGGCTTTTGTCCCACTATTGGGCCTATGGGGAGGTTTTGCTTACTCTCCTCTTTTGGTACTACAGGATTGGGAATTCTCATATGAGTCAGGCGTAGCAAATGACAAAATTCATGAAGCAGTTGAGGCATGGAAATTCGAAAAGAAAATAAAGAGCTTGCGACATTGTGAGAAGCCTTTAGTTCCAAGCATAGTGTCAAAGAAAAATCACGACAATGGAGAGAGGGATTTGAAAAGGTTAAGAGAAATGAATTGTGTTTTGGCAATAGAAAACAAAAAGTTGAGAGAAGAAGTCAAAAGATGGGTCCAACAAGCTGTTAGTGCTCAAAGAGATTTGGACGAGGCAAAACGAAAGCAATCAGAGCTGGTGAAGGATAACGATTCTTTAAAAATTGAGGTGATCCAAGTGAGAAAAAAGAATAAGAGATTATTACGGAACATTGTTGACTTGCATGAAGAAACAGAAGCTAAAAACATACTGAGACACAAGTATGATGGTAAATTAAGACAAATGGCGAGGATGGCAGATCAATTCTCAGTGAAAGCTATGACCCTCCGACAAGGCATTGTACCCACACATGATAGAACAGAGAATTGTCTCGTTTTCTATGGATCATAG

Protein sequence

MTETFRSLNHCRIQGKGKFFNCAPMLFIWISRHLRCPNNFGYSQIKFSSPWNNARNTIREFNSAHWDPSAQEFRVLMHFFSHLTTEELVWRAPWVPTSPWTYRCGKLAFVPLLGLWGGFAYSPLLVLQDWEFSYESGVANDKIHEAVEAWKFEKKIKSLRHCEKPLVPSIVSKKNHDNGERDLKRLREMNCVLAIENKKLREEVKRWVQQAVSAQRDLDEAKRKQSELVKDNDSLKIEVIQVRKKNKRLLRNIVDLHEETEAKNILRHKYDGKLRQMARMADQFSVKAMTLRQGIVPTHDRTENCLVFYGS

Homology

[Close]

BLAST of PI0027993 vs. ExPASy TrEMBL
Match: A0A5D3D0S2 (Glial fibrillary acidic protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold96G001090 PE=4 SV=1)

HSP 1 Score: 400.2 bits (1027), Expect = 7.8e-108
Identity = 208/301 (69.10%), Postives = 228/301 (75.75%), Query Frame = 0


Query: 1   MTETFRSLNHCRIQGKGKFFNCAPMLFIWISRHLRCPNNFGYSQIKFSSPWNNARNTIRE 60
           MTETFRSLNHCRIQGKGKFF+CAPMLFIWIS HLR PNNFGY QIKFSSPWNN RNTIRE
Sbjct: 124 MTETFRSLNHCRIQGKGKFFSCAPMLFIWISSHLRYPNNFGYLQIKFSSPWNNTRNTIRE 183

Query: 61  FNSAHWDPSAQEFRVLMHFFSHLTTEELVWRAPWVPTSPWTYRCGKLAFVPLLGLW-GGF 120
           FNSAHWDP   EF V M FFSHLTT + +WRAPW+ TSP T+RCGKLA + LLGLW GG 
Sbjct: 184 FNSAHWDPKDTEFGVWMQFFSHLTTIDAIWRAPWMLTSPLTHRCGKLAIILLLGLWGGGI 243

Query: 121 AYSPLLV---------------LQDWEFSYESGVANDKIHEAVEAWKFEKKIKSLRHCE- 180
           AYSPLLV               L+DWEFSYES +AN+KIHEAVEAWKF KK+KSLRHCE 
Sbjct: 244 AYSPLLVLRQSWSKQFAPVVCGLEDWEFSYESNIANNKIHEAVEAWKFVKKMKSLRHCEG 303

Query: 181 ---------------------KPLVPSIVSKKNHDNGERDLKRLREMNCVLAIENKKLRE 240
                                + LVP+I  KK HD  E++LKRLREMNCV+A EN+KLRE
Sbjct: 304 TTEQYDNWRASRNGITINAMSESLVPNIELKKYHDK-EKELKRLREMNCVMATENEKLRE 363

Query: 241 EVKRWVQQAVSAQRDLDEAKRKQSELVKDNDSLKIEVIQVRKKNKRLLRNIVDLHEETEA 264
           EVK+WVQQAV+ QRDLDEAKRK  EL K+NDSL  E IQVRKKNKRLLRNI +LHEE EA
Sbjct: 364 EVKKWVQQAVNTQRDLDEAKRKLLELEKENDSLNTEAIQVRKKNKRLLRNIANLHEEIEA 423

[Close]

BLAST of PI0027993 vs. ExPASy TrEMBL
Match: A0A5A7SUT0 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold845G00100 PE=4 SV=1)

HSP 1 Score: 299.7 bits (766), Expect = 1.4e-77
Identity = 183/384 (47.66%), Postives = 217/384 (56.51%), Query Frame = 0


Query: 1   MTETFRSLNHCRIQGKGKFFNCAPMLFIWISRHLRCPNNFGYSQIKFSSPWNNARNTIRE 60
           M ETFRSLNHCRIQGKGKFF+CAPMLFIWIS HLR PNNFGY QIKF+SPWN  RNTIRE
Sbjct: 238 MAETFRSLNHCRIQGKGKFFSCAPMLFIWISSHLRYPNNFGYPQIKFNSPWNKTRNTIRE 297

Query: 61  FNSAHWDPSAQEFRVLMHFFSHLTTEELVWRAPWVPTSPWTYRCGKLAFVPLLGLWGGFA 120
           FNSAHWDP   EF                               G +A+ PLL L   ++
Sbjct: 298 FNSAHWDPKDPEFGAY---------------------------GGGIAYSPLLVLRQSWS 357

Query: 121 --YSPLLV-LQDWEFSYESGVANDKIHEAVEAWKFEKKIKSLRHCE-------------- 180
             ++P++  L+DWEFSYES +ANDKIHEAVEAWKF KK+KSLRHCE              
Sbjct: 358 KQFAPVVCGLEDWEFSYESNIANDKIHEAVEAWKFVKKMKSLRHCEGTTEQYDNWRASRN 417

Query: 181 --------KPLVPSIVSKKNHDNGERDLKRLREMNCVLAIENKKLREEVKRWVQQAVSAQ 240
                   + LVP+I  KK HD  E++LKRLREMNCVLA EN+KLREEVK+WVQQAV+  
Sbjct: 418 GITMNPMSESLVPNIELKKYHDK-EKELKRLREMNCVLATENEKLREEVKKWVQQAVNTP 477

Query: 241 RDLDEAKRKQSE-------LVKDNDSLKIEVIQVRKKNKRLLRNI--------------- 300
           RDLDEAKRK+ E       L    +  K ++I+   KN  L + +               
Sbjct: 478 RDLDEAKRKRLETAMGIEVLQHSIEEYKSQLIEAESKNNFLQKAVNSSESQLLICRKARE 537

Query: 301 -----------------VDLHEETEAKNILRHKYDG----------KLRQMARMADQFSV 311
                            +D     +    LR KYD           KLRQMAR+ADQFSV
Sbjct: 538 VITDDYAQLIEKYQEMSIDFMMWKDEYETLRRKYDDAIGRMERGAEKLRQMARVADQFSV 593

[Close]

BLAST of PI0027993 vs. ExPASy TrEMBL
Match: A0A5A7VHI3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1023G00080 PE=4 SV=1)

HSP 1 Score: 220.3 bits (560), Expect = 1.1e-53
Identity = 97/118 (82.20%), Postives = 102/118 (86.44%), Query Frame = 0


Query: 1   MTETFRSLNHCRIQGKGKFFNCAPMLFIWISRHLRCPNNFGYSQIKFSSPWNNARNTIRE 60
           M ETFRSLNHC+IQGKGKFF+CAPMLFIWIS HLR PNNFGY QIKFSSPWN  RNTIRE
Sbjct: 238 MAETFRSLNHCQIQGKGKFFSCAPMLFIWISSHLRYPNNFGYPQIKFSSPWNKTRNTIRE 297

Query: 61  FNSAHWDPSAQEFRVLMHFFSHLTTEELVWRAPWVPTSPWTYRCGKLAFVPLLGLWGG 119
           FNSAHWDP   EF V M FFSHLTT E +WRAPW+PTSP TYRCGKLAF+ LLGLWGG
Sbjct: 298 FNSAHWDPKDPEFGVWMQFFSHLTTIEAIWRAPWMPTSPLTYRCGKLAFISLLGLWGG 355

[Close]

BLAST of PI0027993 vs. ExPASy TrEMBL
Match: A0A5A7SNY0 (Glial fibrillary acidic protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold134G001110 PE=4 SV=1)

HSP 1 Score: 206.8 bits (525), Expect = 1.3e-49
Identity = 138/300 (46.00%), Postives = 162/300 (54.00%), Query Frame = 0


Query: 1   MTETFRSLNHCRIQGKGKFFNCAPMLFIWISRHLRCPNNFGYSQIKFSSPWNNARNTIRE 60
           MTETFRSLNHCRIQ                                   P+N+ R  +  
Sbjct: 124 MTETFRSLNHCRIQ--------------------------------VFQPFNDNRCNLES 183

Query: 61  FNSAHWDPSAQEFRVLMHFFSHLTTEELVWRAPWVPTSPWTYRCGKLAFVPLLGLWGGFA 120
              A                 H + +  +W+  + PT            + L+G  GG A
Sbjct: 184 PLDA-----------------HKSFDTPLWKIGYYPT------------IRLMG--GGIA 243

Query: 121 YSPLLV---------------LQDWEFSYESGVANDKIHEAVEAWKFEKKIKSLRHCE-- 180
           YSPLLV               L+DWEFSYES +AN+KIHEAVEAWKF KK+KSLRHCE  
Sbjct: 244 YSPLLVLRQSWSKQFAPVVCGLEDWEFSYESNIANNKIHEAVEAWKFVKKMKSLRHCEGT 303

Query: 181 --------------------KPLVPSIVSKKNHDNGERDLKRLREMNCVLAIENKKLREE 240
                               + LVP+I  KK HD  E++LKRLREMNCV+A EN+KLREE
Sbjct: 304 TEQYDNWRASRNGITINAMSESLVPNIELKKYHDK-EKELKRLREMNCVMATENEKLREE 359

Query: 241 VKRWVQQAVSAQRDLDEAKRKQSELVKDNDSLKIEVIQVRKKNKRLLRNIVDLHEETEAK 264
           VK+WVQQAV+ QRDLDEAKRK  EL K+NDSL  E IQVRKKNKRLLRNI +LHEE EAK
Sbjct: 364 VKKWVQQAVNTQRDLDEAKRKLLELEKENDSLNTEAIQVRKKNKRLLRNIANLHEEIEAK 359

[Close]

BLAST of PI0027993 vs. ExPASy TrEMBL
Match: A0A5A7T5S7 (Girdin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold86G00170 PE=4 SV=1)

HSP 1 Score: 179.1 bits (453), Expect = 2.8e-41
Identity = 120/341 (35.19%), Postives = 169/341 (49.56%), Query Frame = 0


Query: 1   MTETFRSLNHCRIQGKGKFFNCAPMLFIWISRHLRCPNNFGYSQIKFSSPWNNARNTIRE 60
           + ETFRSLN+CR +G+GK   C P+L+IWI  H++ P  F   ++ FSSPWN  RNTI E
Sbjct: 204 LAETFRSLNYCRNKGEGKLNCCVPLLYIWIHSHIKFPAEFRCPRLDFSSPWNLMRNTISE 263

Query: 61  FNSAHWDPSAQEFRVLMHFFSHLTTEELVWRAPWVPTSPWTYRCGKLAFVPLLGLWGGFA 120
           F  A WDP+       + FF+ LT+E ++W+A W+P     YRCG    VPLLG WGG  
Sbjct: 264 FGMAVWDPTYPRKEAWLSFFAKLTSENVIWKAQWMPLKAVIYRCGDFHSVPLLGPWGGVN 323

Query: 121 YSPLLV---------------LQDWEFSYESGVANDKIHEAVEAWKFEKKIKSLRHCEKP 180
           Y+PLLV               LQ+ +FSY+      K  +AV AWK  +KIK   H E  
Sbjct: 324 YTPLLVLRQVWLKQFIPPTHNLQESDFSYDPEDCQGKKRQAVCAWKSIRKIKDKGHYEGV 383

Query: 181 LVPSIVSKKNHDNGERDLKR-----------------------LREMNCVLAIENKKLRE 240
                  + N      D+ R                       L E N +L  EN+KLR+
Sbjct: 384 TSGYEAWQANRRKNIIDISREVVESGKETSFEQPNQWIEKSIELEEKNRLLEQENEKLRK 443

Query: 241 EVKRWVQQAVSAQRDLDEAK---RKQSELVKDNDSLKIEVIQVRKKNKRL------LRNI 291
           E  +W+  A   Q +L++ K   + Q +L KD ++L  E+ ++ K N+ L      L+  
Sbjct: 444 ETSQWMDHATYLQNELEKTKSFLKNQDKLEKDLETLDEEMRRMNKANRSLKNEKTTLQAT 503

[Close]

BLAST of PI0027993 vs. NCBI nr
Match: TYK16834.1 (glial fibrillary acidic protein-like [Cucumis melo var. makuwa])

HSP 1 Score: 400.2 bits (1027), Expect = 1.6e-107
Identity = 208/301 (69.10%), Postives = 228/301 (75.75%), Query Frame = 0


Query: 1   MTETFRSLNHCRIQGKGKFFNCAPMLFIWISRHLRCPNNFGYSQIKFSSPWNNARNTIRE 60
           MTETFRSLNHCRIQGKGKFF+CAPMLFIWIS HLR PNNFGY QIKFSSPWNN RNTIRE
Sbjct: 124 MTETFRSLNHCRIQGKGKFFSCAPMLFIWISSHLRYPNNFGYLQIKFSSPWNNTRNTIRE 183

Query: 61  FNSAHWDPSAQEFRVLMHFFSHLTTEELVWRAPWVPTSPWTYRCGKLAFVPLLGLW-GGF 120
           FNSAHWDP   EF V M FFSHLTT + +WRAPW+ TSP T+RCGKLA + LLGLW GG 
Sbjct: 184 FNSAHWDPKDTEFGVWMQFFSHLTTIDAIWRAPWMLTSPLTHRCGKLAIILLLGLWGGGI 243

Query: 121 AYSPLLV---------------LQDWEFSYESGVANDKIHEAVEAWKFEKKIKSLRHCE- 180
           AYSPLLV               L+DWEFSYES +AN+KIHEAVEAWKF KK+KSLRHCE 
Sbjct: 244 AYSPLLVLRQSWSKQFAPVVCGLEDWEFSYESNIANNKIHEAVEAWKFVKKMKSLRHCEG 303

Query: 181 ---------------------KPLVPSIVSKKNHDNGERDLKRLREMNCVLAIENKKLRE 240
                                + LVP+I  KK HD  E++LKRLREMNCV+A EN+KLRE
Sbjct: 304 TTEQYDNWRASRNGITINAMSESLVPNIELKKYHDK-EKELKRLREMNCVMATENEKLRE 363

Query: 241 EVKRWVQQAVSAQRDLDEAKRKQSELVKDNDSLKIEVIQVRKKNKRLLRNIVDLHEETEA 264
           EVK+WVQQAV+ QRDLDEAKRK  EL K+NDSL  E IQVRKKNKRLLRNI +LHEE EA
Sbjct: 364 EVKKWVQQAVNTQRDLDEAKRKLLELEKENDSLNTEAIQVRKKNKRLLRNIANLHEEIEA 423

[Close]

BLAST of PI0027993 vs. NCBI nr
Match: KAA0033221.1 (uncharacterized protein E6C27_scaffold845G00100 [Cucumis melo var. makuwa])

HSP 1 Score: 299.7 bits (766), Expect = 3.0e-77
Identity = 183/384 (47.66%), Postives = 217/384 (56.51%), Query Frame = 0


Query: 1   MTETFRSLNHCRIQGKGKFFNCAPMLFIWISRHLRCPNNFGYSQIKFSSPWNNARNTIRE 60
           M ETFRSLNHCRIQGKGKFF+CAPMLFIWIS HLR PNNFGY QIKF+SPWN  RNTIRE
Sbjct: 238 MAETFRSLNHCRIQGKGKFFSCAPMLFIWISSHLRYPNNFGYPQIKFNSPWNKTRNTIRE 297

Query: 61  FNSAHWDPSAQEFRVLMHFFSHLTTEELVWRAPWVPTSPWTYRCGKLAFVPLLGLWGGFA 120
           FNSAHWDP   EF                               G +A+ PLL L   ++
Sbjct: 298 FNSAHWDPKDPEFGAY---------------------------GGGIAYSPLLVLRQSWS 357

Query: 121 --YSPLLV-LQDWEFSYESGVANDKIHEAVEAWKFEKKIKSLRHCE-------------- 180
             ++P++  L+DWEFSYES +ANDKIHEAVEAWKF KK+KSLRHCE              
Sbjct: 358 KQFAPVVCGLEDWEFSYESNIANDKIHEAVEAWKFVKKMKSLRHCEGTTEQYDNWRASRN 417

Query: 181 --------KPLVPSIVSKKNHDNGERDLKRLREMNCVLAIENKKLREEVKRWVQQAVSAQ 240
                   + LVP+I  KK HD  E++LKRLREMNCVLA EN+KLREEVK+WVQQAV+  
Sbjct: 418 GITMNPMSESLVPNIELKKYHDK-EKELKRLREMNCVLATENEKLREEVKKWVQQAVNTP 477

Query: 241 RDLDEAKRKQSE-------LVKDNDSLKIEVIQVRKKNKRLLRNI--------------- 300
           RDLDEAKRK+ E       L    +  K ++I+   KN  L + +               
Sbjct: 478 RDLDEAKRKRLETAMGIEVLQHSIEEYKSQLIEAESKNNFLQKAVNSSESQLLICRKARE 537

Query: 301 -----------------VDLHEETEAKNILRHKYDG----------KLRQMARMADQFSV 311
                            +D     +    LR KYD           KLRQMAR+ADQFSV
Sbjct: 538 VITDDYAQLIEKYQEMSIDFMMWKDEYETLRRKYDDAIGRMERGAEKLRQMARVADQFSV 593

[Close]

BLAST of PI0027993 vs. NCBI nr
Match: KAA0065295.1 (uncharacterized protein E6C27_scaffold1023G00080 [Cucumis melo var. makuwa])

HSP 1 Score: 220.3 bits (560), Expect = 2.3e-53
Identity = 97/118 (82.20%), Postives = 102/118 (86.44%), Query Frame = 0


Query: 1   MTETFRSLNHCRIQGKGKFFNCAPMLFIWISRHLRCPNNFGYSQIKFSSPWNNARNTIRE 60
           M ETFRSLNHC+IQGKGKFF+CAPMLFIWIS HLR PNNFGY QIKFSSPWN  RNTIRE
Sbjct: 238 MAETFRSLNHCQIQGKGKFFSCAPMLFIWISSHLRYPNNFGYPQIKFSSPWNKTRNTIRE 297

Query: 61  FNSAHWDPSAQEFRVLMHFFSHLTTEELVWRAPWVPTSPWTYRCGKLAFVPLLGLWGG 119
           FNSAHWDP   EF V M FFSHLTT E +WRAPW+PTSP TYRCGKLAF+ LLGLWGG
Sbjct: 298 FNSAHWDPKDPEFGVWMQFFSHLTTIEAIWRAPWMPTSPLTYRCGKLAFISLLGLWGG 355

[Close]

BLAST of PI0027993 vs. NCBI nr
Match: KAA0032013.1 (glial fibrillary acidic protein-like [Cucumis melo var. makuwa])

HSP 1 Score: 206.8 bits (525), Expect = 2.6e-49
Identity = 138/300 (46.00%), Postives = 162/300 (54.00%), Query Frame = 0


Query: 1   MTETFRSLNHCRIQGKGKFFNCAPMLFIWISRHLRCPNNFGYSQIKFSSPWNNARNTIRE 60
           MTETFRSLNHCRIQ                                   P+N+ R  +  
Sbjct: 124 MTETFRSLNHCRIQ--------------------------------VFQPFNDNRCNLES 183

Query: 61  FNSAHWDPSAQEFRVLMHFFSHLTTEELVWRAPWVPTSPWTYRCGKLAFVPLLGLWGGFA 120
              A                 H + +  +W+  + PT            + L+G  GG A
Sbjct: 184 PLDA-----------------HKSFDTPLWKIGYYPT------------IRLMG--GGIA 243

Query: 121 YSPLLV---------------LQDWEFSYESGVANDKIHEAVEAWKFEKKIKSLRHCE-- 180
           YSPLLV               L+DWEFSYES +AN+KIHEAVEAWKF KK+KSLRHCE  
Sbjct: 244 YSPLLVLRQSWSKQFAPVVCGLEDWEFSYESNIANNKIHEAVEAWKFVKKMKSLRHCEGT 303

Query: 181 --------------------KPLVPSIVSKKNHDNGERDLKRLREMNCVLAIENKKLREE 240
                               + LVP+I  KK HD  E++LKRLREMNCV+A EN+KLREE
Sbjct: 304 TEQYDNWRASRNGITINAMSESLVPNIELKKYHDK-EKELKRLREMNCVMATENEKLREE 359

Query: 241 VKRWVQQAVSAQRDLDEAKRKQSELVKDNDSLKIEVIQVRKKNKRLLRNIVDLHEETEAK 264
           VK+WVQQAV+ QRDLDEAKRK  EL K+NDSL  E IQVRKKNKRLLRNI +LHEE EAK
Sbjct: 364 VKKWVQQAVNTQRDLDEAKRKLLELEKENDSLNTEAIQVRKKNKRLLRNIANLHEEIEAK 359

[Close]

BLAST of PI0027993 vs. NCBI nr
Match: KAA0036941.1 (girdin-like [Cucumis melo var. makuwa])

HSP 1 Score: 179.1 bits (453), Expect = 5.9e-41
Identity = 120/341 (35.19%), Postives = 169/341 (49.56%), Query Frame = 0


Query: 1   MTETFRSLNHCRIQGKGKFFNCAPMLFIWISRHLRCPNNFGYSQIKFSSPWNNARNTIRE 60
           + ETFRSLN+CR +G+GK   C P+L+IWI  H++ P  F   ++ FSSPWN  RNTI E
Sbjct: 204 LAETFRSLNYCRNKGEGKLNCCVPLLYIWIHSHIKFPAEFRCPRLDFSSPWNLMRNTISE 263

Query: 61  FNSAHWDPSAQEFRVLMHFFSHLTTEELVWRAPWVPTSPWTYRCGKLAFVPLLGLWGGFA 120
           F  A WDP+       + FF+ LT+E ++W+A W+P     YRCG    VPLLG WGG  
Sbjct: 264 FGMAVWDPTYPRKEAWLSFFAKLTSENVIWKAQWMPLKAVIYRCGDFHSVPLLGPWGGVN 323

Query: 121 YSPLLV---------------LQDWEFSYESGVANDKIHEAVEAWKFEKKIKSLRHCEKP 180
           Y+PLLV               LQ+ +FSY+      K  +AV AWK  +KIK   H E  
Sbjct: 324 YTPLLVLRQVWLKQFIPPTHNLQESDFSYDPEDCQGKKRQAVCAWKSIRKIKDKGHYEGV 383

Query: 181 LVPSIVSKKNHDNGERDLKR-----------------------LREMNCVLAIENKKLRE 240
                  + N      D+ R                       L E N +L  EN+KLR+
Sbjct: 384 TSGYEAWQANRRKNIIDISREVVESGKETSFEQPNQWIEKSIELEEKNRLLEQENEKLRK 443

Query: 241 EVKRWVQQAVSAQRDLDEAK---RKQSELVKDNDSLKIEVIQVRKKNKRL------LRNI 291
           E  +W+  A   Q +L++ K   + Q +L KD ++L  E+ ++ K N+ L      L+  
Sbjct: 444 ETSQWMDHATYLQNELEKTKSFLKNQDKLEKDLETLDEEMRRMNKANRSLKNEKTTLQAT 503

The following BLAST results are available for this feature:

BLAST of PI0027993 vs.


Match Name	E-value	Identity	Description

BLAST of PI0027993 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3D0S2	7.8e-108	69.10	Glial fibrillary acidic protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E...	[more]
A0A5A7SUT0	1.4e-77	47.66	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold84...	[more]
A0A5A7VHI3	1.1e-53	82.20	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5A7SNY0	1.3e-49	46.00	Glial fibrillary acidic protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E...	[more]
A0A5A7T5S7	2.8e-41	35.19	Girdin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold86G00170 PE=...	[more]

BLAST of PI0027993 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK16834.1	1.6e-107	69.10	glial fibrillary acidic protein-like [Cucumis melo var. makuwa]	[more]
KAA0033221.1	3.0e-77	47.66	uncharacterized protein E6C27_scaffold845G00100 [Cucumis melo var. makuwa]	[more]
KAA0065295.1	2.3e-53	82.20	uncharacterized protein E6C27_scaffold1023G00080 [Cucumis melo var. makuwa]	[more]
KAA0032013.1	2.6e-49	46.00	glial fibrillary acidic protein-like [Cucumis melo var. makuwa]	[more]
KAA0036941.1	5.9e-41	35.19	girdin-like [Cucumis melo var. makuwa]	[more]

BLAST of PI0027993 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 197..259
None	No IPR available	PANTHER	PTHR48200	PROTEIN, PUTATIVE-RELATED	coord: 2..136

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0027993.1	PI0027993.1	mRNA