PI0027985 (gene) Melon (PI 482460) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CAACAAAAGATGGTCCACAACAACACCGCAAGTTTCATTCCTGTTCAATCTCAAAACCCTTCCCCTTTCCCAATTTCAAAATAAGAACAAAAACTAACTCAACCAAAAAAAAAATATCCCGATTCAACCTTCTCTTCTTCAAATCCTCCCAATACACATCCACTGGGATTTGAAGGGTAAGATCGCCTCATCGTATTCGAATATGTATTTCTCTCTTGCTTTCTGTTCTTTGCTCATTCTGATTGTTTTTTATTGATTCTGTATCTACAATGTTCTTCCGCCCACTTCTGTTTGTATTTTTGGAATTGTTTGTTTTGATGCCATCTATTTCTTTTTCCGTGGTTTGTTCTTGTGTGTTCTGCCTTTTTTATGGGTTGTGATTTAATTGTTTTGCCGCGACTTGTACAATTAATGGGGTTTGTCTGTAATGTAGTGTTAATCCTTGATATGATTTGGGAACTGCTTTAGATTAGGTTTATATCTGGCTGACAGAACAATCCATCATCTCTGGGCAATTTTCTTGTTCCAAGTTCCAACTGTGGTGTGTTTAATGTTTTTATTCTTTTCAAGTAACCCATCTCTTTTGTGGACAGGTAGGGAAATTTTTGCACGTCCCTTCTTAAGAATTTTTTCTAAAAACATCGTAGAGTTTTATTTCTGTTTATGGTTACTCTTGTAAATTAAAAAATAGATGTTCGATCTTTTGCAAGCCTTGTTTCCATAGCACTGCAGCTTAGTTTAGTTAGGGATTGTTCAATGATCTTATTCAAGTAGTTAAACATCATTCATTATCATGTTGAATTCAATCCAATCTTCTCTAATGTTATATATCTTTTGATCTCAAATTGATGGTACTTCTGATGTTTATAACTTTGTATGGTAGTGTTGTCTTGTAGGATCCTTGTTGATTTAGTTGGTTTTTTCCCCTTTTTTTTCTCTTTTCTTTCAGGTTCATCTCTTATATACAGCATAATTGAGTCATTGAGGATAAAGTTAATCACTAATAAGCCTTGGTCAAATGCAACTATAGCTACTATTGCAGGTGGTCATTTCTGACCAGTAGTTGCCTGTTGTTAGAATGTGGAATTTTGCTTCCAATTGTGTGGCTGGATGTGCTGGACTAAAGAGCAGCTCCCGAAAACCATCACATACTGCCACAGAGTGTTCAGATGATGAGCTATCTTCAGATGGTAGGGAGGAAGTGCTAGAGTGCCCAATATGTTGGGAATCCTTCAATATCGTTGAGAACGTGCCCCATGTTTTATGGTGTGGCCATACACTCTGCAAGAATTGCATCTTGGGATTGCAGTGGGCTGTGGTGAAGTTTCCAACATTACCGGTTCAGCTTCCGCTTTTTATATCTTGCCCCTGGTGCAACCTCTTATCCTTTCGCCTAGTTTATAAAGGAAACCTCAAATTCCCTTGCAAGAATTACTTCCTTTTGTGGATGGTTGAGAACATAAACGTTGAAAGAGTTAAATCTCATTCTGCGTTCTCTGGGGATCAGCTAGTCTTTCCAGTGAGCGGTACTTCATCCAGGGGTAATCAAGTCAGTCACAATAACCTTAGGAGGGGACACCATGTTCGTCAATTAGATTCACAAGGACCAAACAATGCCAATAGCCATTTCCATAGCTTCAACCTGGAGAGGCTTCAATCTTCTCTCCGCAAATTGCTTGTTTTCTTTGTTCATTTGACAGCCAAGTTTCCATTGGTGATCATCTTCCTCCTGATTGTCTTATATGCCGTGCCTGCCAGTGCAGCAATATTGGCTCTGTACGTATTAGTCACGGTCCTTTTTGCTCTCCCGTCATTTCTCATATTGTATTTTGCTTACCCCAGTCTGGATTGGTTGATGAGGGAGATCATCACTTAAGGTTTATACCATATGGCAATGTGAATTGTGACTAGTAGAGACCATCACTTCAGGACTTTTACTTCTACAAGCCAGTCACATCTTTCAGGAAAGTTGACTTCATATTTTAGCTTGTTGATACATTAGCTTCCCAATTTGCCGACATTTCAGCTGGACCGTTCATATTCAACATCAAACTCAAGTTCATGGACGATGATTGCAGTCCCAGGTAAAAAATAGGTCTTGTTTTCGGTTTAGTGTCCTAATTGTTCTTTTTTCTTTTTCATTAAAAATCTTCTTTAGTAAGGAAGTACAAGGAATTTGGTTATTTCTGGTGTCATCTTGTTGCTTCTTTGTGCCATATTAACTCTCATCGTGTAATAGATCTGGAAATTAGATGTTGTATGGACAAAGCTATAAGAAGCTCAAGTCCTTGCTTGTATAGAGGATTGGATTAATTATATGCCAGTATCCACCCGTCCCCCAATAAATAAAAAATAAAAAATAGTAAGAAGGTGAAATTTTAGTTTAGTA CAACAAAAGATGGTCCACAACAACACCGCAAGTTTCATTCCTGTTCAATCTCAAAACCCTTCCCCTTTCCCAATTTCAAAATAAGAACAAAAACTAACTCAACCAAAAAAAAAATATCCCGATTCAACCTTCTCTTCTTCAAATCCTCCCAATACACATCCACTGGGATTTGAAGGGTTCATCTCTTATATACAGCATAATTGAGTCATTGAGGATAAAGTTAATCACTAATAAGCCTTGGTCAAATGCAACTATAGCTACTATTGCAGGTGGTCATTTCTGACCAGTAGTTGCCTGTTGTTAGAATGTGGAATTTTGCTTCCAATTGTGTGGCTGGATGTGCTGGACTAAAGAGCAGCTCCCGAAAACCATCACATACTGCCACAGAGTGTTCAGATGATGAGCTATCTTCAGATGGTAGGGAGGAAGTGCTAGAGTGCCCAATATGTTGGGAATCCTTCAATATCGTTGAGAACGTGCCCCATGTTTTATGGTGTGGCCATACACTCTGCAAGAATTGCATCTTGGGATTGCAGTGGGCTGTGGTGAAGTTTCCAACATTACCGGTTCAGCTTCCGCTTTTTATATCTTGCCCCTGGTGCAACCTCTTATCCTTTCGCCTAGTTTATAAAGGAAACCTCAAATTCCCTTGCAAGAATTACTTCCTTTTGTGGATGGTTGAGAACATAAACGTTGAAAGAGTTAAATCTCATTCTGCGTTCTCTGGGGATCAGCTAGTCTTTCCAGTGAGCGGTACTTCATCCAGGGGTAATCAAGTCAGTCACAATAACCTTAGGAGGGGACACCATGTTCGTCAATTAGATTCACAAGGACCAAACAATGCCAATAGCCATTTCCATAGCTTCAACCTGGAGAGGCTTCAATCTTCTCTCCGCAAATTGCTTGTTTTCTTTGTTCATTTGACAGCCAAGTTTCCATTGGTGATCATCTTCCTCCTGATTGTCTTATATGCCGTGCCTGCCAGTGCAGCAATATTGGCTCTGTACGTATTAGTCACGGTCCTTTTTGCTCTCCCGTCATTTCTCATATTGTATTTTGCTTACCCCAGTCTGGATTGGTTGATGAGGGAGATCATCACTTAAGGTTTATACCATATGGCAATGTGAATTGTGACTAGTAGAGACCATCACTTCAGGACTTTTACTTCTACAAGCCAGTCACATCTTTCAGGAAAGTTGACTTCATATTTTAGCTTGTTGATACATTAGCTTCCCAATTTGCCGACATTTCAGCTGGACCGTTCATATTCAACATCAAACTCAAGTTCATGGACGATGATTGCAGTCCCAGGTAAAAAATAGGTCTTGTTTTCGGTTTAGTGTCCTAATTGTTCTTTTTTCTTTTTCATTAAAAATCTTCTTTAGTAAGGAAGTACAAGGAATTTGGTTATTTCTGGTGTCATCTTGTTGCTTCTTTGTGCCATATTAACTCTCATCGTGTAATAGATCTGGAAATTAGATGTTGTATGGACAAAGCTATAAGAAGCTCAAGTCCTTGCTTGTATAGAGGATTGGATTAATTATATGCCAGTATCCACCCGTCCCCCAATAAATAAAAAATAAAAAATAGTAAGAAGGTGAAATTTTAGTTTAGTA ATGTGGAATTTTGCTTCCAATTGTGTGGCTGGATGTGCTGGACTAAAGAGCAGCTCCCGAAAACCATCACATACTGCCACAGAGTGTTCAGATGATGAGCTATCTTCAGATGGTAGGGAGGAAGTGCTAGAGTGCCCAATATGTTGGGAATCCTTCAATATCGTTGAGAACGTGCCCCATGTTTTATGGTGTGGCCATACACTCTGCAAGAATTGCATCTTGGGATTGCAGTGGGCTGTGGTGAAGTTTCCAACATTACCGGTTCAGCTTCCGCTTTTTATATCTTGCCCCTGGTGCAACCTCTTATCCTTTCGCCTAGTTTATAAAGGAAACCTCAAATTCCCTTGCAAGAATTACTTCCTTTTGTGGATGGTTGAGAACATAAACGTTGAAAGAGTTAAATCTCATTCTGCGTTCTCTGGGGATCAGCTAGTCTTTCCAGTGAGCGGTACTTCATCCAGGGGTAATCAAGTCAGTCACAATAACCTTAGGAGGGGACACCATGTTCGTCAATTAGATTCACAAGGACCAAACAATGCCAATAGCCATTTCCATAGCTTCAACCTGGAGAGGCTTCAATCTTCTCTCCGCAAATTGCTTGTTTTCTTTGTTCATTTGACAGCCAAGTTTCCATTGGTGATCATCTTCCTCCTGATTGTCTTATATGCCGTGCCTGCCAGTGCAGCAATATTGGCTCTGTACGTATTAGTCACGGTCCTTTTTGCTCTCCCGTCATTTCTCATATTGTATTTTGCTTACCCCAGTCTGGATTGGTTGATGAGGGAGATCATCACTTAA MWNFASNCVAGCAGLKSSSRKPSHTATECSDDELSSDGREEVLECPICWESFNIVENVPHVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRLVYKGNLKFPCKNYFLLWMVENINVERVKSHSAFSGDQLVFPVSGTSSRGNQVSHNNLRRGHHVRQLDSQGPNNANSHFHSFNLERLQSSLRKLLVFFVHLTAKFPLVIIFLLIVLYAVPASAAILALYVLVTVLFALPSFLILYFAYPSLDWLMREIIT Homology
BLAST of PI0027985 vs. ExPASy Swiss-Prot
Match: Q13049 (E3 ubiquitin-protein ligase TRIM32 OS=Homo sapiens OX=9606 GN=TRIM32 PE=1 SV=2) HSP 1 Score: 52.0 bits (123), Expect = 1.2e-05 Identity = 25/70 (35.71%), Postives = 38/70 (54.29%), Query Frame = 0
BLAST of PI0027985 vs. ExPASy Swiss-Prot
Match: Q8CH72 (E3 ubiquitin-protein ligase TRIM32 OS=Mus musculus OX=10090 GN=Trim32 PE=1 SV=2) HSP 1 Score: 52.0 bits (123), Expect = 1.2e-05 Identity = 26/78 (33.33%), Postives = 40/78 (51.28%), Query Frame = 0
BLAST of PI0027985 vs. ExPASy Swiss-Prot
Match: Q9H0X6 (RING finger protein 208 OS=Homo sapiens OX=9606 GN=RNF208 PE=1 SV=2) HSP 1 Score: 49.7 bits (117), Expect = 6.0e-05 Identity = 25/65 (38.46%), Postives = 34/65 (52.31%), Query Frame = 0
BLAST of PI0027985 vs. ExPASy Swiss-Prot
Match: Q8K0W3 (RING finger protein 208 OS=Mus musculus OX=10090 GN=Rnf208 PE=1 SV=2) HSP 1 Score: 48.5 bits (114), Expect = 1.3e-04 Identity = 22/60 (36.67%), Postives = 33/60 (55.00%), Query Frame = 0
BLAST of PI0027985 vs. ExPASy TrEMBL
Match: A0A0A0K8G4 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G042350 PE=4 SV=1) HSP 1 Score: 524.6 bits (1350), Expect = 2.4e-145 Identity = 264/265 (99.62%), Postives = 264/265 (99.62%), Query Frame = 0
BLAST of PI0027985 vs. ExPASy TrEMBL
Match: A0A1S3BDF4 (uncharacterized protein LOC103488671 OS=Cucumis melo OX=3656 GN=LOC103488671 PE=4 SV=1) HSP 1 Score: 513.8 bits (1322), Expect = 4.1e-142 Identity = 258/265 (97.36%), Postives = 262/265 (98.87%), Query Frame = 0
BLAST of PI0027985 vs. ExPASy TrEMBL
Match: A0A5D3BZF8 (RING-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold121G00650 PE=4 SV=1) HSP 1 Score: 513.8 bits (1322), Expect = 4.1e-142 Identity = 258/265 (97.36%), Postives = 262/265 (98.87%), Query Frame = 0
BLAST of PI0027985 vs. ExPASy TrEMBL
Match: A0A6J1GC00 (uncharacterized protein LOC111452589 OS=Cucurbita moschata OX=3662 GN=LOC111452589 PE=4 SV=1) HSP 1 Score: 482.3 bits (1240), Expect = 1.3e-132 Identity = 244/265 (92.08%), Postives = 253/265 (95.47%), Query Frame = 0
BLAST of PI0027985 vs. ExPASy TrEMBL
Match: A0A6J1K9F8 (uncharacterized protein LOC111492874 OS=Cucurbita maxima OX=3661 GN=LOC111492874 PE=4 SV=1) HSP 1 Score: 481.1 bits (1237), Expect = 3.0e-132 Identity = 243/265 (91.70%), Postives = 252/265 (95.09%), Query Frame = 0
BLAST of PI0027985 vs. NCBI nr
Match: XP_004140883.1 (uncharacterized protein LOC101203968 [Cucumis sativus] >XP_004140884.1 uncharacterized protein LOC101203968 [Cucumis sativus] >KGN46000.1 hypothetical protein Csa_004783 [Cucumis sativus]) HSP 1 Score: 524.6 bits (1350), Expect = 4.9e-145 Identity = 264/265 (99.62%), Postives = 264/265 (99.62%), Query Frame = 0
BLAST of PI0027985 vs. NCBI nr
Match: XP_038885347.1 (uncharacterized protein LOC120075760 [Benincasa hispida] >XP_038885348.1 uncharacterized protein LOC120075760 [Benincasa hispida] >XP_038885349.1 uncharacterized protein LOC120075760 [Benincasa hispida]) HSP 1 Score: 518.8 bits (1335), Expect = 2.7e-143 Identity = 261/265 (98.49%), Postives = 263/265 (99.25%), Query Frame = 0
BLAST of PI0027985 vs. NCBI nr
Match: XP_008445733.1 (PREDICTED: uncharacterized protein LOC103488671 [Cucumis melo] >XP_008445735.1 PREDICTED: uncharacterized protein LOC103488671 [Cucumis melo] >KAA0033044.1 uncharacterized protein E6C27_scaffold269G001500 [Cucumis melo var. makuwa] >TYK03459.1 uncharacterized protein E5676_scaffold121G00650 [Cucumis melo var. makuwa]) HSP 1 Score: 513.8 bits (1322), Expect = 8.6e-142 Identity = 258/265 (97.36%), Postives = 262/265 (98.87%), Query Frame = 0
BLAST of PI0027985 vs. NCBI nr
Match: XP_023523716.1 (uncharacterized protein LOC111787870 [Cucurbita pepo subsp. pepo] >XP_023523718.1 uncharacterized protein LOC111787870 [Cucurbita pepo subsp. pepo] >XP_023523719.1 uncharacterized protein LOC111787870 [Cucurbita pepo subsp. pepo] >XP_023523720.1 uncharacterized protein LOC111787870 [Cucurbita pepo subsp. pepo] >XP_023523721.1 uncharacterized protein LOC111787870 [Cucurbita pepo subsp. pepo] >XP_023523722.1 uncharacterized protein LOC111787870 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 484.6 bits (1246), Expect = 5.6e-133 Identity = 244/265 (92.08%), Postives = 253/265 (95.47%), Query Frame = 0
BLAST of PI0027985 vs. NCBI nr
Match: KAG7036804.1 (hypothetical protein SDJN02_00424, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 484.6 bits (1246), Expect = 5.6e-133 Identity = 244/265 (92.08%), Postives = 253/265 (95.47%), Query Frame = 0
BLAST of PI0027985 vs. TAIR 10
Match: AT3G29270.1 (RING/U-box superfamily protein ) HSP 1 Score: 306.2 bits (783), Expect = 2.5e-83 Identity = 164/266 (61.65%), Postives = 196/266 (73.68%), Query Frame = 0
BLAST of PI0027985 vs. TAIR 10
Match: AT3G29270.2 (RING/U-box superfamily protein ) HSP 1 Score: 306.2 bits (783), Expect = 2.5e-83 Identity = 164/266 (61.65%), Postives = 196/266 (73.68%), Query Frame = 0
BLAST of PI0027985 vs. TAIR 10
Match: AT1G69330.1 (RING/U-box superfamily protein ) HSP 1 Score: 252.7 bits (644), Expect = 3.3e-67 Identity = 147/271 (54.24%), Postives = 186/271 (68.63%), Query Frame = 0
BLAST of PI0027985 vs. TAIR 10
Match: AT1G74370.1 (RING/U-box superfamily protein ) HSP 1 Score: 216.5 bits (550), Expect = 2.6e-56 Identity = 130/275 (47.27%), Postives = 166/275 (60.36%), Query Frame = 0
BLAST of PI0027985 vs. TAIR 10
Match: AT1G21651.1 (zinc ion binding ) HSP 1 Score: 50.1 bits (118), Expect = 3.3e-06 Identity = 23/59 (38.98%), Postives = 31/59 (52.54%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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