Homology
BLAST of PI0027933 vs. ExPASy Swiss-Prot
Match:
Q9LF10 (Chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At5g16180 PE=3 SV=2)
HSP 1 Score: 625.9 bits (1613), Expect = 5.9e-178
Identity = 362/725 (49.93%), Postives = 471/725 (64.97%), Query Frame = 0
Query: 31 NPISATSTPSQSSVLSDPPSISNAAVNLRTAPWMKAPLHLQPQQEEDVDPANPKRRNGSD 90
N S + SQ + +S+AA+ + TAPWMK PL L+P + D N R+
Sbjct: 56 NSSSRRAKSSQFDQFRENRGVSDAAIKVPTAPWMKGPLLLRPDEILDTKKRNKPRK---- 115
Query: 91 GNGRDKCSRALGDRGIDKTGKYAMRRIAKSIGKLQRNGDSGETRM-KLEEVEF-GDFD-- 150
+K +AL R GK AM++I +++ KL + DS ET+M L E E+ G +
Sbjct: 116 --VEEKTFKALNRRESGVRGKKAMKKIVRNVEKLDEDSDSEETQMDDLSEFEYLGRIEEK 175
Query: 151 LEGFEEYGTRRRMPWEKDDDGIVLRRMKKKTV-TSAELNLDRVLLERLKGEASKMEKWVK 210
+E + +G +MPWE++++ +LRRMKK++V T+AEL LD LL RL+ EASKM KWV
Sbjct: 176 VESKDRFG--GKMPWEREEERFILRRMKKESVPTTAELILDEGLLNRLRREASKMRKWVN 235
Query: 211 VNKVGVTQDVVNKIQFIWERNELAMLKFDVPLSRNMDRAREIVEMKTGGMVVWSKKNALV 270
V K GVT+ VVNKI+ +W+ NELAM++FDVPL RNM+RA+EI+EMKTGG+VV SKK LV
Sbjct: 236 VRKAGVTELVVNKIKSMWKLNELAMVRFDVPLCRNMERAQEIIEMKTGGLVVLSKKEFLV 295
Query: 271 VYRGCNYPLSLKHSTKMQVDSSYCSKTQLLQQNPVKVETDTHFSLSGHYESALNQSINDN 330
VYRG SY S+ Q
Sbjct: 296 VYRG---------------GPSYSSEGQ-------------------------------- 355
Query: 331 DGEWEEASSFFLMHHGNLQPLSGSLYERETDRLLDDLGPRFIDWWMHKPLPVDADMLPEV 390
+S SLYERE DRLLD LGPR++DWWM +P PVDAD+LPEV
Sbjct: 356 ------------------DEISSSLYEREADRLLDGLGPRYMDWWMRRPFPVDADLLPEV 415
Query: 391 VPGYMPPFRRCPPYTKQNLTDAELQHLRKLAHSLPTHFVLGRNRKLQGLAASILKLWEKS 450
V GYM P RRCPP T+ LTD EL +LR +A LP HFVLGRN LQGLA++I+KLWEK
Sbjct: 416 VNGYMTPSRRCPPNTRAKLTDEELTYLRNIAQPLPFHFVLGRNYGLQGLASAIVKLWEKC 475
Query: 451 MIAKIALKWGVPNTNNEQMAFELKNLTGGTLLLRNKFLIILYRGNDFLPVGVADSIIQRE 510
+IAKIA+KWG NTNNE+MA EL+ LTGG L+LRNK+LI+LYRG DFL VAD + RE
Sbjct: 476 IIAKIAIKWGALNTNNEEMADELRYLTGGVLILRNKYLIVLYRGKDFLSDEVADLVEDRE 535
Query: 511 IELQRWQLHEENSRLKASEFFCFDTG--NVEERGKAGTLADFKDVTVEYEDLSTGSTESK 570
L R+Q EE R E T ++E K+GTL +F+++ ++ ++
Sbjct: 536 RLLSRYQHFEETKRESDIELLEVVTNGKQLKETNKSGTLLEFQELQRKFGEMD----PRN 595
Query: 571 LQAEAEKEKIIRELRMQERRLNILNFKVEKSTKELTKLNASWRHVEPDADQELITNEERI 630
L+ EAEK ++ +EL+ QE +L+IL K+EKS EL KLN+ W+ E D D E++TNEER
Sbjct: 596 LETEAEKARLEKELKSQEHKLSILKSKIEKSNMELFKLNSLWKPSEGDDDIEILTNEERE 655
Query: 631 CFRKMGLKMDSCLTLGRRGVFDGVIEGLHQHWKHREVVKVITMQRAFNQVIYTAKSLEAE 690
C R++GLKM+S L LGRRGVF GV+EGLHQHWKHREV KVITMQ+ F++V+YTAK+LE E
Sbjct: 656 CLRRIGLKMNSSLVLGRRGVFFGVMEGLHQHWKHREVAKVITMQKLFSRVVYTAKALETE 703
Query: 691 SGGVLVSVDKLKEGYAIIIFRGKNYKRPLHS-VSKNLLTKRKALSRSLEMQRIGSLKFFA 748
S GVL+S++KLKEG+AI+I+RGKNYKRP +++NLLTKRKAL RS+ MQR+GSLKFFA
Sbjct: 716 SNGVLISIEKLKEGHAILIYRGKNYKRPSSKLMAQNLLTKRKALQRSVVMQRLGSLKFFA 703
BLAST of PI0027933 vs. ExPASy Swiss-Prot
Match:
Q6YYA3 (Chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os08g0360100 PE=2 SV=1)
HSP 1 Score: 530.0 bits (1364), Expect = 4.4e-149
Identity = 293/602 (48.67%), Postives = 403/602 (66.94%), Query Frame = 0
Query: 151 EEYGTRRRMPW---EKDDDGIVLRRMKKKTV-TSAELNLDRVLLERLKGEASKMEKWVKV 210
E+ G RR +PW ++ +VLRR KK V T AE L+ LERL+ A E+W +
Sbjct: 117 EKKGIRRAVPWAAARDEETKVVLRREKKTRVPTRAETELEAGELERLRRAARGKERWARA 176
Query: 211 NKVGVTQDVVNKIQFIWER-NELAMLKFDVPLSRNMDRAREIVEMKTGGMVVWSKKNALV 270
K G+T +VV +++ W + ELA ++ PL R MDRAREI+E+KTGG+VVW++
Sbjct: 177 KKAGITDEVVEEVRGQWAKGQELAGVRIVEPLRRCMDRAREILEIKTGGLVVWTRGGIHF 236
Query: 271 VYRGCNYPLSLKHSTKMQVDSSYCSKTQLLQQNPVKVETDTHFSLSGHYESALNQSINDN 330
VYRG +Y L+++ + + +Y + +PV T + + G Y S NDN
Sbjct: 237 VYRGSSY---LENAKRHRDFVNYNE-----ELSPV---TSNNPTSQGKYWSKDETLTNDN 296
Query: 331 DGEWEEASSFFLMHHGNLQPLSGSLYERETDRLLDDLGPRFIDWWMHKPLPVDADMLPEV 390
D E ++ +P+ G+LYERE +RLLD LGPRFIDWW + PLPVDAD+LPEV
Sbjct: 297 D-EADDKDD---------KPIKGTLYEREVNRLLDSLGPRFIDWWWNTPLPVDADLLPEV 356
Query: 391 VPGYMPPFRRCPPYTKQNLTDAELQHLRKLAHSLPTHFVLGRNRKLQGLAASILKLWEKS 450
VP + PFR+CPP + L D EL +LRK A LPTHFVLGRN KLQGLAA+ILKLWEKS
Sbjct: 357 VPDFKTPFRQCPPGVRPALADEELTYLRKHARPLPTHFVLGRNTKLQGLAAAILKLWEKS 416
Query: 451 MIAKIALKWGVPNTNNEQMAFELKNLTGGTLLLRNKFLIILYRGNDFLPVGVADSIIQRE 510
+IAK+A+K G+ NTN+EQMA LK LTGGT++LRNK II+YRG DFLP GVA+S+I+RE
Sbjct: 417 LIAKVAVKVGIQNTNHEQMARNLKRLTGGTVILRNKDYIIIYRGKDFLPGGVAESVIERE 476
Query: 511 IELQRWQLHEENSRLKASEFFCFDTGNVEERGKAGTLADFKDVTVEYEDLSTGSTESKLQ 570
++ Q EE +RLK ++ G ER GT +++D + +T ++Q
Sbjct: 477 SQVHDQQAKEEEARLKMADSLQMIVGLSSERSYVGTFREYQDFHDSHARRTT-ENNFRIQ 536
Query: 571 AEAEKEKIIRELRMQERRLNILNFKVEKSTKELTKLNASWRHVEPDADQELITNEERICF 630
EA+K ++ +EL+ QE RL++L K+E+S + L KL++SW + D D+EL+T EER F
Sbjct: 537 LEAKKHRLEKELKDQEWRLSMLTKKIERSNQVLAKLHSSWSPSKKDGDRELLTEEERRIF 596
Query: 631 RKMGLKMDSCLTLGRRGVFDGVIEGLHQHWKHREVVKVITMQRAFNQVIYTAKSLEAESG 690
RK+GLKMD + LGRRGVF+GVIE +HQHWKH+EVVKVIT Q +Q+ YT+ LE E+G
Sbjct: 597 RKIGLKMDEHVLLGRRGVFEGVIEEIHQHWKHKEVVKVITKQNQASQITYTSMMLEVETG 656
Query: 691 GVLVSVDKLKEGYAIIIFRGKNYKRPLHSVSKNLLTKRKALSRSLEMQRIGSLKFFANQR 748
G L+++++ +AII++RGKNY+RP S NLLTKR+AL RS+E+QR GS+K+FA +R
Sbjct: 657 GTLIAIERFTTSHAIILYRGKNYRRPTKSAPSNLLTKREALQRSIEVQRRGSMKYFAQER 696
BLAST of PI0027933 vs. ExPASy Swiss-Prot
Match:
Q9FYT6 (Chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic OS=Zea mays OX=4577 GN=CRS1 PE=1 SV=1)
HSP 1 Score: 523.9 bits (1348), Expect = 3.2e-147
Identity = 285/599 (47.58%), Postives = 389/599 (64.94%), Query Frame = 0
Query: 157 RRMPW-EKDDDG--IVLRRMKK-KTVTSAELNLDRVLLERLKGEASKMEKWVKVNKVGVT 216
R +PW D+G + LRR KK + T AE L+ L RL+ A + +W + K GVT
Sbjct: 138 RAVPWAAARDEGLKVALRREKKPREPTRAETELETHELRRLRRLARGIGRWARAKKAGVT 197
Query: 217 QDVVNKIQFIW-ERNELAMLKFDVPLSRNMDRAREIVEMKTGGMVVWSKKNALVVYRGCN 276
+VV +++ W ELA ++ PL R+MDRAREI+E+KTGG+VVW+K + VYRG
Sbjct: 198 DEVVKEVRREWASGEELAAVRIVEPLRRSMDRAREILEIKTGGLVVWTKGDMHFVYRGSK 257
Query: 277 YPLSLKHSTKMQVDSSYCSKTQLLQQNPVKVETDTHFSLSGHYESALNQSINDNDGEWEE 336
Y + KHS F + H + A ++ G+ +E
Sbjct: 258 YQQNAKHSHT--------------------------FLTNVHKDDAFQENDQSICGQKDE 317
Query: 337 ASSFFLMHHGNLQPLSGSLYERETDRLLDDLGPRFIDWWMHKPLPVDADMLPEVVPGYMP 396
+P+ G+LYERE +RLLD LGPRF+DWW PLPVDAD+LPE VPG
Sbjct: 318 ------------EPVKGTLYEREVNRLLDTLGPRFVDWWWDTPLPVDADLLPEFVPGSKT 377
Query: 397 PFRRCPPYTKQNLTDAELQHLRKLAHSLPTHFVLGRNRKLQGLAASILKLWEKSMIAKIA 456
P+R CPP + L D EL +LRKLA LPTHF LGRN +LQGLAA+ILKLWEKS+IAKIA
Sbjct: 378 PYRLCPPGVRPTLADEELTYLRKLARLLPTHFALGRNTRLQGLAAAILKLWEKSLIAKIA 437
Query: 457 LKWGVPNTNNEQMAFELKNLTGGTLLLRNKFLIILYRGNDFLPVGVADSIIQREIELQRW 516
+K G+ NTNNEQMA+ LK+LTGGT++LRNK IILYRG DFLP GVA ++IQRE ++
Sbjct: 438 VKIGIQNTNNEQMAWNLKHLTGGTVILRNKDFIILYRGKDFLPGGVAQTVIQREAQVHDE 497
Query: 517 QLHEENSRLKASEFFCFDTGNVEERGKAGTLADFKDVTVEYEDLSTGSTESKLQAEAEKE 576
Q+ EE +RLKA + G + E GT +++ ++ +T ++ + ++ EAEK
Sbjct: 498 QVKEEEARLKAVDSLQM-VGELSEESSLGTFREYQGFHAKFVHENTENSNTMIELEAEKY 557
Query: 577 KIIRELRMQERRLNILNFKVEKSTKELTKLNASWRHVEPDADQELITNEERICFRKMGLK 636
++ +EL+ E +L++LN K+E+S + L KL++SW E AD+E +T EE+I FR++G K
Sbjct: 558 RLEKELKDHEWKLSVLNKKIERSNQALAKLHSSWSPSEQSADREHLTEEEKIMFRRIGRK 617
Query: 637 MDSCLTLGRRGVFDGVIEGLHQHWKHREVVKVITMQRAFNQVIYTAKSLEAESGGVLVSV 696
MD + LGRRG+FDGVIE +HQHWKH+EVVKVIT Q Q++Y A LE E+GG+L++V
Sbjct: 618 MDGLVLLGRRGIFDGVIEEIHQHWKHKEVVKVITKQNQTRQIMYAASLLEVETGGILIAV 677
Query: 697 DKLKEGYAIIIFRGKNYKRPLHSVSKNLLTKRKALSRSLEMQRIGSLKFFANQRQQKFL 751
+KL +AII++RGKNY+RP S NLLTKR+AL RS+E+QR GS+K+F +RQ+ L
Sbjct: 678 EKLTTSHAIILYRGKNYRRPAKSSFSNLLTKREALRRSIEVQRRGSMKYFVRERQKSIL 697
BLAST of PI0027933 vs. ExPASy Swiss-Prot
Match:
Q2R1U8 (CRM-domain containing factor CFM3, chloroplastic/mitochondrial OS=Oryza sativa subsp. japonica OX=39947 GN=CFM3 PE=3 SV=1)
HSP 1 Score: 385.2 bits (988), Expect = 1.8e-105
Identity = 238/589 (40.41%), Postives = 338/589 (57.39%), Query Frame = 0
Query: 158 RMPWE----KDDDGIVLRRMKKKTVTSAELNLDRVLLERLKGEASKMEKWVKVNKVGVTQ 217
R PWE + G R + AEL L L RL+ +++ +KV GVT+
Sbjct: 148 RFPWELPMPPPEAG---PRAARSKAWMAELTLPEAELRRLRHAGMRLKSRIKVGGAGVTR 207
Query: 218 DVVNKIQFIWERNELAMLKFDVPLSRNMDRAREIVEMKTGGMVVWSKKNALVVYRGCNY- 277
++V +I+ W +E+ +K + NM EI+E KTGG+V+W ++ +YRG Y
Sbjct: 208 EIVERIRDRWRNDEVVRIKVTGTPALNMRLFHEILERKTGGLVIWRSGTSVSLYRGVAYD 267
Query: 278 -PLSLKHSTKMQVDSSYCSKTQLLQQNPVKVETDTHFSLSGHYESALNQSIN---DNDGE 337
P K ++K TQ L E H L N+ +N DN+G
Sbjct: 268 IPEPTKGTSK---------NTQTLGMKSSIKEPPGHSLLP-------NEKVNEMQDNNGA 327
Query: 338 WEEASSFFLMHHGNLQPLSGSLYERETDRLLDDLGPRFIDWWMHKPLPVDADMLPEVVPG 397
+ + ++P+ YE E D+LLD+LGPR+ DW P PVDAD+LP VPG
Sbjct: 328 LVSNAEKDTL----VEPVPEIKYEDEIDKLLDELGPRYDDWPRPDPSPVDADLLPATVPG 387
Query: 398 YMPPFRRCPPYTKQNLTDAELQHLRKLAHSLPTHFVLGRNRKLQGLAASILKLWEKSMIA 457
Y PPFR P + +L+ + +LR+LA LP HF LGR+R+LQGLAA+++KLWEKS IA
Sbjct: 388 YKPPFRVLPYGVRPSLSRRDTTNLRRLARGLPPHFALGRSRQLQGLAAAMVKLWEKSSIA 447
Query: 458 KIALKWGVPNTNNEQMAFELKNLTGGTLLLRNKFLIILYRGNDFLPVGVADSIIQREIEL 517
KIALK GV T +E+MA ++K LTGG +L RN ++ YRG DFL +A+ +++RE
Sbjct: 448 KIALKRGVQLTTSERMAEDIKKLTGGVMLSRNNDFMVFYRGKDFLSPELAEKLLERE--- 507
Query: 518 QRWQ---LHEENSRLKASEFFCFDTGNVEERGKAGTLADFKDVTVEYEDLSTGSTESKLQ 577
RW EE +RL A+ F T E AGTL + + +Y + + E+K+
Sbjct: 508 -RWAKSLQDEEQARLNAASSFSSRTEAPVEPTVAGTLGETLEANSKYGNKLDENYENKMT 567
Query: 578 AEAEKEKIIRELRMQERRLNILNFKVEKSTKELTKLNASWRHVEPDADQELITNEERICF 637
E + +R E +L + K+EK+ + L K+ + + E E IT+EER F
Sbjct: 568 RTVEAARHADLVRKLEWKLQLAQKKIEKAERVLGKVETALKPTEGIQPPETITDEERFMF 627
Query: 638 RKMGLKMDSCLTLGRRGVFDGVIEGLHQHWKHREVVKVITMQRAFNQVIYTAKSLEAESG 697
RK+GL+M + L LGRRGVFDG IE +H HWK+RE+VK++ ++F V A SLEAESG
Sbjct: 628 RKLGLRMKAFLLLGRRGVFDGTIENMHLHWKYRELVKILVKAKSFGDVKKIALSLEAESG 687
Query: 698 GVLVSVDKLKEGYAIIIFRGKNYKRPLHSVSKNLLTKRKALSRSLEMQR 735
G+LVSVDK+ +GYAI++FRGK+Y RP +NLL+KRKAL+RS+E+QR
Sbjct: 688 GILVSVDKVSKGYAIVVFRGKDYARPSKLRPRNLLSKRKALARSIEIQR 709
BLAST of PI0027933 vs. ExPASy Swiss-Prot
Match:
F4J2U9 (CRM-domain containing factor CFM3A, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=3702 GN=CFM3A PE=2 SV=1)
HSP 1 Score: 382.9 bits (982), Expect = 8.7e-105
Identity = 228/566 (40.28%), Postives = 328/566 (57.95%), Query Frame = 0
Query: 174 KKKTVTSAELNLDRVLLERLKGEASKMEKWVKVNKVGVTQDVVNKIQFIWERNELAMLKF 233
K+ + AE+ L L RL+ + +++ GVTQ V+ I+ W+ E+ LK
Sbjct: 210 KENRYSLAEMTLPESELRRLRNLTFRTASKMRIRGGGVTQVAVDAIKEKWKSAEIVRLKI 269
Query: 234 DVPLSRNMDRAREIVEMKTGGMVVWSKKNALVVYRGCNYPLSLKHSTKMQVDSSYCSKTQ 293
+ + NM + EI+E KTGG+V+W ++ +YRG +Y L K +
Sbjct: 270 EGASALNMRKMHEILEKKTGGLVIWRSGTSISLYRGVSYELPSGKWNKQR---------- 329
Query: 294 LLQQNPVKVETDTHFSLSGHYESALNQSINDNDGEWEEASSFFLMHHGNLQPLSGSLYER 353
+ ET + H E+ +D + Q YE
Sbjct: 330 -------REETPPEAVIENHDETTTMVDKSDEKVHLPQLEQETTSVEKKDQTSPVVEYED 389
Query: 354 ETDRLLDDLGPRFIDWWMHKPLPVDADMLPEVVPGYMPPFRRCPPYTKQNLTDAELQHLR 413
E D LLDDLGPRF+DW PLPVDAD+LP +P Y PPFR P + +L E LR
Sbjct: 390 ELDELLDDLGPRFMDWPGDNPLPVDADLLPGAIPDYEPPFRVLPYGVRSSLGPKEATALR 449
Query: 414 KLAHSLPTHFVLGRNRKLQGLAASILKLWEKSMIAKIALKWGVPNTNNEQMAFELKNLTG 473
+LA S+P HF LGR+R+LQGLA ++++LWEKSM+AKIA+K GV +T +E+MA +LK LTG
Sbjct: 450 RLARSIPPHFALGRSRQLQGLATAMVRLWEKSMLAKIAIKRGVQSTTSERMAEDLKKLTG 509
Query: 474 GTLLLRNKFLIILYRGNDFLPVGVADSIIQREIELQRWQLHEENSRLKASEFFCF-DTGN 533
G +L RNK ++ YRG +FL VAD+++++E ++ Q EE +RL+ S T
Sbjct: 510 GIMLSRNKDFLVFYRGKNFLSREVADALVEQERFVRTLQDEEEQARLRGSSALIVPSTEP 569
Query: 534 VEERGKAGTLADFKDVTVEY-EDLSTGSTESKLQAEAE---KEKIIRELRMQERRLNILN 593
+ AGTL + D T ++ ++L +++ E E E ++R+L ER+L
Sbjct: 570 ANKLVSAGTLGETLDATGKWGKNLDDDDHSDEVKQEVEILRHENLVRKL---ERKLAFAE 629
Query: 594 FKVEKSTKELTKLNASWRHVEPDADQELITNEERICFRKMGLKMDSCLTLGRRGVFDGVI 653
K+ K+ + L K+ + E D E IT+EER FRK+GLKM + L LGRRGVFDG +
Sbjct: 630 RKLLKAERGLAKVEVCLKPAEQREDPESITDEERFMFRKLGLKMKAFLLLGRRGVFDGTV 689
Query: 654 EGLHQHWKHREVVKVITMQRAFNQVIYTAKSLEAESGGVLVSVDKLKEGYAIIIFRGKNY 713
E +H HWK+RE+VK+I + F+ V A +LEAESGG+LVS+DK+ +GYAII++RG++Y
Sbjct: 690 ENMHLHWKYRELVKIIVKAKTFDGVKKVALALEAESGGILVSIDKVTKGYAIIVYRGQDY 749
Query: 714 KRPLHSVSKNLLTKRKALSRSLEMQR 735
KRP KNLLTKRKAL+RS+E+QR
Sbjct: 750 KRPTMLRPKNLLTKRKALARSIELQR 755
BLAST of PI0027933 vs. ExPASy TrEMBL
Match:
A0A0A0LSY1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G404830 PE=4 SV=1)
HSP 1 Score: 1362.8 bits (3526), Expect = 0.0e+00
Identity = 699/752 (92.95%), Postives = 715/752 (95.08%), Query Frame = 0
Query: 1 MLPTTSFSSSLPRILIPPSFRSHSPL--FSTHNPISATSTPSQSSVLSDPPSISNAAVNL 60
MLPTTSFSSSLPR LIPPSFRSHSPL STHNPISATSTPSQSSVL +PPSISNAAVNL
Sbjct: 1 MLPTTSFSSSLPRSLIPPSFRSHSPLLHLSTHNPISATSTPSQSSVLPEPPSISNAAVNL 60
Query: 61 RTAPWMKAPLHLQPQQ--EEDVDPANPKRRNGSDGNGRDKCSRALGDRGIDKTGKYAMRR 120
RTAPWMKAPLHLQPQQ EE VDPANPKRRNGSDG+GRDKCSRALGD GIDKTGKYAMRR
Sbjct: 61 RTAPWMKAPLHLQPQQQEEEGVDPANPKRRNGSDGSGRDKCSRALGDSGIDKTGKYAMRR 120
Query: 121 IAKSIGKLQRNGDSGETRMKLEEVEFGDFDLEGFEEYGTRRRMPWEKDDDGIVLRRMKKK 180
IAKSIGKL+RNGD GETRMKLEEVEFG FDLEGFEE GTRRRMPWEKDDDGIVLRRMKKK
Sbjct: 121 IAKSIGKLRRNGDLGETRMKLEEVEFGGFDLEGFEESGTRRRMPWEKDDDGIVLRRMKKK 180
Query: 181 TVTSAELNLDRVLLERLKGEASKMEKWVKVNKVGVTQDVVNKIQFIWERNELAMLKFDVP 240
TVTSAELNLDRVLLERLKGEASKMEKWVKVNKVGVTQDVVN+IQF+WERNELAMLKFDVP
Sbjct: 181 TVTSAELNLDRVLLERLKGEASKMEKWVKVNKVGVTQDVVNQIQFMWERNELAMLKFDVP 240
Query: 241 LSRNMDRAREIVEMKTGGMVVWSKKNALVVYRGCNYPLSLKHSTKMQVDSSYCSKTQLLQ 300
LSRNMDRAREIVEMKTGGMVVWSKKNALVVYRGCNYPL+LKHSTK QV S
Sbjct: 241 LSRNMDRAREIVEMKTGGMVVWSKKNALVVYRGCNYPLNLKHSTKKQVHIS--------P 300
Query: 301 QNPVKVETDTHFSLSGHYESALNQSINDNDGEWEEASSFFLMHHGNLQPLSGSLYERETD 360
QNPVKVETDTHFSLSGHYES LN+SINDNDGEWEEASSFFL+ H NLQPLSGSLYERETD
Sbjct: 301 QNPVKVETDTHFSLSGHYESGLNRSINDNDGEWEEASSFFLIRHENLQPLSGSLYERETD 360
Query: 361 RLLDDLGPRFIDWWMHKPLPVDADMLPEVVPGYMPPFRRCPPYTKQNLTDAELQHLRKLA 420
RLLDDLGPRFIDWWMHKPLPVDADMLPEVVPGYMPPFRRCPPYTKQNLTDA LQHLRKLA
Sbjct: 361 RLLDDLGPRFIDWWMHKPLPVDADMLPEVVPGYMPPFRRCPPYTKQNLTDAGLQHLRKLA 420
Query: 421 HSLPTHFVLGRNRKLQGLAASILKLWEKSMIAKIALKWGVPNTNNEQMAFELKNLTGGTL 480
HSLPTHFVLGRNRKLQGLAASILKLWEKSMIAKIALKWGVPNT+NEQMA ELKNLTGGTL
Sbjct: 421 HSLPTHFVLGRNRKLQGLAASILKLWEKSMIAKIALKWGVPNTDNEQMALELKNLTGGTL 480
Query: 481 LLRNKFLIILYRGNDFLPVGVADSIIQREIELQRWQLHEENSRLKASEFFCFDTGNVEER 540
LLRNKF+IILYRGNDFLPVGVADSIIQRE+ELQRWQLHEENSRLKASEFFCFDT N+EER
Sbjct: 481 LLRNKFVIILYRGNDFLPVGVADSIIQREVELQRWQLHEENSRLKASEFFCFDTENMEER 540
Query: 541 GKAGTLADFKDVTVEYEDLSTGSTESKLQAEAEKEKIIRELRMQERRLNILNFKVEKSTK 600
GKAGTL+DFKD+TV YEDLSTGSTES+LQAEAEK KIIR LRMQERRL ILNFKVEKSTK
Sbjct: 541 GKAGTLSDFKDITVGYEDLSTGSTESRLQAEAEKGKIIRGLRMQERRLKILNFKVEKSTK 600
Query: 601 ELTKLNASWRHVEPDADQELITNEERICFRKMGLKMDSCLTLGRRGVFDGVIEGLHQHWK 660
ELTKLNASWR VEPDADQELITNEERICFRKMGLKMDSCLTLGRRGVFDGVIEGLHQHWK
Sbjct: 601 ELTKLNASWRRVEPDADQELITNEERICFRKMGLKMDSCLTLGRRGVFDGVIEGLHQHWK 660
Query: 661 HREVVKVITMQRAFNQVIYTAKSLEAESGGVLVSVDKLKEGYAIIIFRGKNYKRPLHSVS 720
HREVVKVITMQRAFNQV YTAK LEAESGG+LVSVDKLKEGYAIIIFRGKNYKRPLHSVS
Sbjct: 661 HREVVKVITMQRAFNQVNYTAKLLEAESGGILVSVDKLKEGYAIIIFRGKNYKRPLHSVS 720
Query: 721 KNLLTKRKALSRSLEMQRIGSLKFFANQRQQK 749
KNLLTKRKALSRSLEMQRIGSLKFFANQRQQK
Sbjct: 721 KNLLTKRKALSRSLEMQRIGSLKFFANQRQQK 744
BLAST of PI0027933 vs. ExPASy TrEMBL
Match:
A0A5D3C8J4 (Chloroplastic group IIA intron splicing facilitator CRS1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold453G001730 PE=4 SV=1)
HSP 1 Score: 1354.7 bits (3505), Expect = 0.0e+00
Identity = 693/750 (92.40%), Postives = 713/750 (95.07%), Query Frame = 0
Query: 1 MLPTTSFSSSLPRILIPPSFRSHSPL--FSTHNPISATSTPSQSSVLSDPPSISNAAVNL 60
MLPTTSFSS LP ILIPPSFRSHS L STH+PISAT TPSQSSVLS+PPSISNAA+NL
Sbjct: 1 MLPTTSFSSPLPTILIPPSFRSHSSLLHLSTHHPISATFTPSQSSVLSEPPSISNAALNL 60
Query: 61 RTAPWMKAPLHLQPQQEEDVDPANPKRRNGSDGNGRDKCSRALGDRGIDKTGKYAMRRIA 120
RTAPWMKAPLHLQ QQEE VDPANPKRRNGSD NG DKCSRALGDRGI+KTGKYAMRRIA
Sbjct: 61 RTAPWMKAPLHLQTQQEEGVDPANPKRRNGSDRNGGDKCSRALGDRGIEKTGKYAMRRIA 120
Query: 121 KSIGKLQRNGDSGETRMKLEEVEFGDFDLEGFEEYGTRRRMPWEKDDDGIVLRRMKKKTV 180
KSIGKL+RNGD GETRM LEEVEFGDFDLEGFEE GTRRRMPWEKDDDGIV RRMKKKT+
Sbjct: 121 KSIGKLRRNGDLGETRMNLEEVEFGDFDLEGFEESGTRRRMPWEKDDDGIVFRRMKKKTM 180
Query: 181 TSAELNLDRVLLERLKGEASKMEKWVKVNKVGVTQDVVNKIQFIWERNELAMLKFDVPLS 240
TSAELNLDR+LLERLK +ASKMEKWVKVNKVGVTQDVVN IQ WERNELAMLKFDVPLS
Sbjct: 181 TSAELNLDRLLLERLKAKASKMEKWVKVNKVGVTQDVVNNIQLKWERNELAMLKFDVPLS 240
Query: 241 RNMDRAREIVEMKTGGMVVWSKKNALVVYRGCNYPLSLKHSTKMQVDSSYCSKTQLLQQN 300
RNMDRAREIVEMKTGGMVVWSKKNALVVYRGCNYPL+LK STKMQVDSS CSKTQ+LQQN
Sbjct: 241 RNMDRAREIVEMKTGGMVVWSKKNALVVYRGCNYPLNLKPSTKMQVDSS-CSKTQVLQQN 300
Query: 301 PVKVETDTHFSLSGHYESALNQSINDNDGEWEEASSFFLMHHGNLQPLSGSLYERETDRL 360
PVKVETDTH SLSGHYES L+QS ND+DGEWEEASSFFLM HGNLQPLSGSLYERETDRL
Sbjct: 301 PVKVETDTHSSLSGHYESGLDQSRNDDDGEWEEASSFFLMRHGNLQPLSGSLYERETDRL 360
Query: 361 LDDLGPRFIDWWMHKPLPVDADMLPEVVPGYMPPFRRCPPYTKQNLTDAELQHLRKLAHS 420
LDDLGPRFIDWWMHKPLPVDADMLPEVVPGYMPPFRRCPPYTKQNLTDA LQHLRKLAHS
Sbjct: 361 LDDLGPRFIDWWMHKPLPVDADMLPEVVPGYMPPFRRCPPYTKQNLTDAGLQHLRKLAHS 420
Query: 421 LPTHFVLGRNRKLQGLAASILKLWEKSMIAKIALKWGVPNTNNEQMAFELKNLTGGTLLL 480
LPTHFVLGRNR LQGLA +ILKLWEKSMIAKIALKWGVPNTNNEQMAFELK LTGGTLLL
Sbjct: 421 LPTHFVLGRNRGLQGLAGAILKLWEKSMIAKIALKWGVPNTNNEQMAFELKKLTGGTLLL 480
Query: 481 RNKFLIILYRGNDFLPVGVADSIIQREIELQRWQLHEENSRLKASEFFCFDTGNVEERGK 540
RNKFLIILYRGNDFLPVGVADSIIQRE+ELQRWQLHEENSRLKASEFFCFDTGN+EERGK
Sbjct: 481 RNKFLIILYRGNDFLPVGVADSIIQRELELQRWQLHEENSRLKASEFFCFDTGNMEERGK 540
Query: 541 AGTLADFKDVTVEYEDLSTGSTESKLQAEAEKEKIIRELRMQERRLNILNFKVEKSTKEL 600
AGTL+DFKDVTVEYEDLST STESKLQAEA++ KIIRELRMQERRL ILNFKVEKSTKEL
Sbjct: 541 AGTLSDFKDVTVEYEDLSTESTESKLQAEAKRGKIIRELRMQERRLKILNFKVEKSTKEL 600
Query: 601 TKLNASWRHVEPDADQELITNEERICFRKMGLKMDSCLTLGRRGVFDGVIEGLHQHWKHR 660
TKLNASW VEPDADQELITNEERICFRKMGLKMDSCLTLGRRGVFDGVIEGLHQHWKHR
Sbjct: 601 TKLNASWSRVEPDADQELITNEERICFRKMGLKMDSCLTLGRRGVFDGVIEGLHQHWKHR 660
Query: 661 EVVKVITMQRAFNQVIYTAKSLEAESGGVLVSVDKLKEGYAIIIFRGKNYKRPLHSVSKN 720
EVVKVITMQRA NQV YTAK LEAESGG+LVSVDKLKEGYAIIIFRGKNYKRPLHSVSKN
Sbjct: 661 EVVKVITMQRALNQVNYTAKLLEAESGGILVSVDKLKEGYAIIIFRGKNYKRPLHSVSKN 720
Query: 721 LLTKRKALSRSLEMQRIGSLKFFANQRQQK 749
LLTKRKALSRSLEMQRIGSLKFFANQRQQ+
Sbjct: 721 LLTKRKALSRSLEMQRIGSLKFFANQRQQQ 749
BLAST of PI0027933 vs. ExPASy TrEMBL
Match:
A0A1S3B2K3 (chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103485442 PE=4 SV=1)
HSP 1 Score: 1354.7 bits (3505), Expect = 0.0e+00
Identity = 693/750 (92.40%), Postives = 713/750 (95.07%), Query Frame = 0
Query: 1 MLPTTSFSSSLPRILIPPSFRSHSPL--FSTHNPISATSTPSQSSVLSDPPSISNAAVNL 60
MLPTTSFSS LP ILIPPSFRSHS L STH+PISAT TPSQSSVLS+PPSISNAA+NL
Sbjct: 1 MLPTTSFSSPLPTILIPPSFRSHSSLLHLSTHHPISATFTPSQSSVLSEPPSISNAALNL 60
Query: 61 RTAPWMKAPLHLQPQQEEDVDPANPKRRNGSDGNGRDKCSRALGDRGIDKTGKYAMRRIA 120
RTAPWMKAPLHLQ QQEE VDPANPKRRNGSD NG DKCSRALGDRGI+KTGKYAMRRIA
Sbjct: 61 RTAPWMKAPLHLQTQQEEGVDPANPKRRNGSDRNGGDKCSRALGDRGIEKTGKYAMRRIA 120
Query: 121 KSIGKLQRNGDSGETRMKLEEVEFGDFDLEGFEEYGTRRRMPWEKDDDGIVLRRMKKKTV 180
KSIGKL+RNGD GETRM LEEVEFGDFDLEGFEE GTRRRMPWEKDDDGIV RRMKKKT+
Sbjct: 121 KSIGKLRRNGDLGETRMNLEEVEFGDFDLEGFEESGTRRRMPWEKDDDGIVFRRMKKKTM 180
Query: 181 TSAELNLDRVLLERLKGEASKMEKWVKVNKVGVTQDVVNKIQFIWERNELAMLKFDVPLS 240
TSAELNLDR+LLERLK +ASKMEKWVKVNKVGVTQDVVN IQ WERNELAMLKFDVPLS
Sbjct: 181 TSAELNLDRLLLERLKAKASKMEKWVKVNKVGVTQDVVNNIQLKWERNELAMLKFDVPLS 240
Query: 241 RNMDRAREIVEMKTGGMVVWSKKNALVVYRGCNYPLSLKHSTKMQVDSSYCSKTQLLQQN 300
RNMDRAREIVEMKTGGMVVWSKKNALVVYRGCNYPL+LK STKMQVDSS CSKTQ+LQQN
Sbjct: 241 RNMDRAREIVEMKTGGMVVWSKKNALVVYRGCNYPLNLKPSTKMQVDSS-CSKTQVLQQN 300
Query: 301 PVKVETDTHFSLSGHYESALNQSINDNDGEWEEASSFFLMHHGNLQPLSGSLYERETDRL 360
PVKVETDTH SLSGHYES L+QS ND+DGEWEEASSFFLM HGNLQPLSGSLYERETDRL
Sbjct: 301 PVKVETDTHSSLSGHYESGLDQSRNDDDGEWEEASSFFLMRHGNLQPLSGSLYERETDRL 360
Query: 361 LDDLGPRFIDWWMHKPLPVDADMLPEVVPGYMPPFRRCPPYTKQNLTDAELQHLRKLAHS 420
LDDLGPRFIDWWMHKPLPVDADMLPEVVPGYMPPFRRCPPYTKQNLTDA LQHLRKLAHS
Sbjct: 361 LDDLGPRFIDWWMHKPLPVDADMLPEVVPGYMPPFRRCPPYTKQNLTDAGLQHLRKLAHS 420
Query: 421 LPTHFVLGRNRKLQGLAASILKLWEKSMIAKIALKWGVPNTNNEQMAFELKNLTGGTLLL 480
LPTHFVLGRNR LQGLA +ILKLWEKSMIAKIALKWGVPNTNNEQMAFELK LTGGTLLL
Sbjct: 421 LPTHFVLGRNRGLQGLAGAILKLWEKSMIAKIALKWGVPNTNNEQMAFELKKLTGGTLLL 480
Query: 481 RNKFLIILYRGNDFLPVGVADSIIQREIELQRWQLHEENSRLKASEFFCFDTGNVEERGK 540
RNKFLIILYRGNDFLPVGVADSIIQRE+ELQRWQLHEENSRLKASEFFCFDTGN+EERGK
Sbjct: 481 RNKFLIILYRGNDFLPVGVADSIIQRELELQRWQLHEENSRLKASEFFCFDTGNMEERGK 540
Query: 541 AGTLADFKDVTVEYEDLSTGSTESKLQAEAEKEKIIRELRMQERRLNILNFKVEKSTKEL 600
AGTL+DFKDVTVEYEDLST STESKLQAEA++ KIIRELRMQERRL ILNFKVEKSTKEL
Sbjct: 541 AGTLSDFKDVTVEYEDLSTESTESKLQAEAKRGKIIRELRMQERRLKILNFKVEKSTKEL 600
Query: 601 TKLNASWRHVEPDADQELITNEERICFRKMGLKMDSCLTLGRRGVFDGVIEGLHQHWKHR 660
TKLNASW VEPDADQELITNEERICFRKMGLKMDSCLTLGRRGVFDGVIEGLHQHWKHR
Sbjct: 601 TKLNASWSRVEPDADQELITNEERICFRKMGLKMDSCLTLGRRGVFDGVIEGLHQHWKHR 660
Query: 661 EVVKVITMQRAFNQVIYTAKSLEAESGGVLVSVDKLKEGYAIIIFRGKNYKRPLHSVSKN 720
EVVKVITMQRA NQV YTAK LEAESGG+LVSVDKLKEGYAIIIFRGKNYKRPLHSVSKN
Sbjct: 661 EVVKVITMQRALNQVNYTAKLLEAESGGILVSVDKLKEGYAIIIFRGKNYKRPLHSVSKN 720
Query: 721 LLTKRKALSRSLEMQRIGSLKFFANQRQQK 749
LLTKRKALSRSLEMQRIGSLKFFANQRQQ+
Sbjct: 721 LLTKRKALSRSLEMQRIGSLKFFANQRQQQ 749
BLAST of PI0027933 vs. ExPASy TrEMBL
Match:
A0A6J1JY40 (chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111489335 PE=4 SV=1)
HSP 1 Score: 1161.0 bits (3002), Expect = 0.0e+00
Identity = 611/753 (81.14%), Postives = 658/753 (87.38%), Query Frame = 0
Query: 1 MLPTTSFSSSLPRILIPPSFRSHS-PL-FSTHN---PISATSTPSQSSVLSDPPSISNAA 60
ML TT FS +LPRIL PPSF S S PL S+H PI ATST SQSS+LS+P S SNAA
Sbjct: 1 MLATTCFSPALPRILFPPSFLSDSTPLHLSSHKPRAPIPATSTGSQSSLLSEPSSDSNAA 60
Query: 61 VNLRTAPWMKAPLHLQPQQEEDVDPANPKRRNGSDGNGRDKCSRALGDRGIDKTGKYAMR 120
+N RTAPW ++PL+LQP +EE VD A P+R NGSDG+G K RAL DR KTGKYAMR
Sbjct: 61 INHRTAPWTESPLYLQPLEEEGVDLAKPERSNGSDGHGGKKRYRALADRRNVKTGKYAMR 120
Query: 121 RIAKSIGKLQRNGDSGETRMKLEEVEFGDFDLEGFEEYGTRRRMPWEKDDDGIVLRRMKK 180
RIAKSI KLQ+NGDSGET MKLEEVEFGDF LEGF+E TR RMPWEK DDGIVLRR KK
Sbjct: 121 RIAKSIEKLQKNGDSGETGMKLEEVEFGDFYLEGFDESRTRGRMPWEK-DDGIVLRRPKK 180
Query: 181 KTVTSAELNLDRVLLERLKGEASKMEKWVKVNKVGVTQDVVNKIQFIWERNELAMLKFDV 240
KTVTSAEL+LD+VLLERL+GEASKME WVKVNK+GVTQDVVNKI F WE NELAMLKFDV
Sbjct: 181 KTVTSAELSLDKVLLERLRGEASKMENWVKVNKIGVTQDVVNKIHFTWETNELAMLKFDV 240
Query: 241 PLSRNMDRAREIVEMKTGGMVVWSKKNALVVYRGCNYPLSLKHSTKMQVDSSYCSKTQLL 300
PLSRNMDRAREIVEMKTGGMVVWSKKNALVVYRGCNYPL LK TKMQVDS YCS+T L
Sbjct: 241 PLSRNMDRAREIVEMKTGGMVVWSKKNALVVYRGCNYPLGLKLRTKMQVDSPYCSRTPFL 300
Query: 301 QQNPVKVETDTHFSLSGHYESALNQSINDNDGEWEEASSFFLMHHGNLQPLSGSLYERET 360
ETDT FSL H E N+SIN+NDGEW EAS+ F LSGSLYERET
Sbjct: 301 -------ETDTDFSLGEHDEGGSNRSINNNDGEWGEASTSF---------LSGSLYERET 360
Query: 361 DRLLDDLGPRFIDWWMHKPLPVDADMLPEVVPGYMPPFRRCPPYTKQNLTDAELQHLRKL 420
DRLLDDLGPRFIDWWMHKPLPVDADMLPEVVPGYMPP+RRCPP+T LTDAEL +LRKL
Sbjct: 361 DRLLDDLGPRFIDWWMHKPLPVDADMLPEVVPGYMPPYRRCPPFTNPKLTDAELLYLRKL 420
Query: 421 AHSLPTHFVLGRNRKLQGLAASILKLWEKSMIAKIALKWGVPNTNNEQMAFELKNLTGGT 480
AH LPTHFVLGRNRKLQGLAA+ILKLWEKS+IAKIALKWGVPNTNNEQMA+ELK+LTGGT
Sbjct: 421 AHPLPTHFVLGRNRKLQGLAAAILKLWEKSLIAKIALKWGVPNTNNEQMAYELKSLTGGT 480
Query: 481 LLLRNKFLIILYRGNDFLPVGVADSIIQREIELQRWQLHEENSRLKASEFFCFDTGNVEE 540
LLLRNKF IILYRG DFLPVG+A SIIQRE ELQRWQLHEENSRLKA E FCFDTGN+EE
Sbjct: 481 LLLRNKFFIILYRGKDFLPVGLASSIIQRETELQRWQLHEENSRLKARELFCFDTGNLEE 540
Query: 541 RGKAGTLADFKDVTVEYEDLSTGSTESKLQAEAEKEKIIRELRMQERRLNILNFKVEKST 600
R KAGTL+DFKD+T+EYEDL+TGSTESKLQA+AEK KIIREL+ QERRL+IL+FKVEKST
Sbjct: 541 RAKAGTLSDFKDITMEYEDLTTGSTESKLQADAEKGKIIRELKKQERRLSILDFKVEKST 600
Query: 601 KELTKLNASWRHVEPDADQELITNEERICFRKMGLKMDSCLTLGRRGVFDGVIEGLHQHW 660
KELTKLNAS RHVEPDADQELITNEERICFRKMGLKM SCLTLGRRG+FDGVIEGLHQHW
Sbjct: 601 KELTKLNASCRHVEPDADQELITNEERICFRKMGLKMHSCLTLGRRGIFDGVIEGLHQHW 660
Query: 661 KHREVVKVITMQRAFNQVIYTAKSLEAESGGVLVSVDKLKEGYAIIIFRGKNYKRPLHSV 720
KHREVVKVI+MQRAFNQV+ TAKSLEAESGG+L+SVDKLKEGYAIIIFRGKNYKRPL SV
Sbjct: 661 KHREVVKVISMQRAFNQVLSTAKSLEAESGGILISVDKLKEGYAIIIFRGKNYKRPLRSV 720
Query: 721 SKNLLTKRKALSRSLEMQRIGSLKFFANQRQQK 749
SKNLLTK KAL RSLE+QRIGSLKFFANQ+++K
Sbjct: 721 SKNLLTKGKALRRSLEIQRIGSLKFFANQKRKK 736
BLAST of PI0027933 vs. ExPASy TrEMBL
Match:
A0A6J1FHM9 (chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111445437 PE=4 SV=1)
HSP 1 Score: 1155.2 bits (2987), Expect = 0.0e+00
Identity = 612/753 (81.27%), Postives = 655/753 (86.99%), Query Frame = 0
Query: 1 MLPTTSFSSSLPRILIPPSFRSHS-PL-FSTHN---PISATSTPSQSSVLSDPPSISNAA 60
ML TT FS +LP IL PPSFRS S PL S+H PI ATST SQSS+LS P S SNAA
Sbjct: 1 MLATTCFSPALPTILFPPSFRSDSTPLHLSSHKPRAPIPATSTGSQSSLLSGPSSDSNAA 60
Query: 61 VNLRTAPWMKAPLHLQPQQEEDVDPANPKRRNGSDGNGRDKCSRALGDRGIDKTGKYAMR 120
+NLRTAPW KAPL+LQPQ+EE VD ANP+R NGSDG+G K RAL DR KTGKYAMR
Sbjct: 61 INLRTAPWTKAPLYLQPQEEEGVDLANPERSNGSDGHGDKKRYRALADRRNVKTGKYAMR 120
Query: 121 RIAKSIGKLQRNGDSGETRMKLEEVEFGDFDLEGFEEYGTRRRMPWEKDDDGIVLRRMKK 180
RIAKSI KLQ+NGDSGET MKLEEVEFGDF LEGF+E TR RMPWEK DDGIVLRR KK
Sbjct: 121 RIAKSIEKLQKNGDSGETGMKLEEVEFGDFYLEGFDESRTRGRMPWEK-DDGIVLRRPKK 180
Query: 181 KTVTSAELNLDRVLLERLKGEASKMEKWVKVNKVGVTQDVVNKIQFIWERNELAMLKFDV 240
KTVTSAEL+LD+VLLERL+GEASK+EKWVKVNK+GVTQDVVNKI F WE NELAMLKFDV
Sbjct: 181 KTVTSAELSLDKVLLERLRGEASKIEKWVKVNKIGVTQDVVNKIHFTWETNELAMLKFDV 240
Query: 241 PLSRNMDRAREIVEMKTGGMVVWSKKNALVVYRGCNYPLSLKHSTKMQVDSSYCSKTQLL 300
PL RNMDRAREIVEMKTGGMVVWSKKNA VVYRGCNYPL LK STKMQVDS YCS+T L
Sbjct: 241 PLCRNMDRAREIVEMKTGGMVVWSKKNAHVVYRGCNYPLGLKLSTKMQVDSPYCSRTPFL 300
Query: 301 QQNPVKVETDTHFSLSGHYESALNQSINDNDGEWEEASSFFLMHHGNLQPLSGSLYERET 360
ETDT FSL E N+SIN+N EW EAS+ F LSGSLYERET
Sbjct: 301 -------ETDTDFSLDEPDEGGSNRSINNNVDEWGEASTSF---------LSGSLYERET 360
Query: 361 DRLLDDLGPRFIDWWMHKPLPVDADMLPEVVPGYMPPFRRCPPYTKQNLTDAELQHLRKL 420
DRLLDDLGPRFIDWWMHKPLPVDADMLPEVVPGYMPP+RRCPP+T LTDAEL +LRKL
Sbjct: 361 DRLLDDLGPRFIDWWMHKPLPVDADMLPEVVPGYMPPYRRCPPFTNPKLTDAELLYLRKL 420
Query: 421 AHSLPTHFVLGRNRKLQGLAASILKLWEKSMIAKIALKWGVPNTNNEQMAFELKNLTGGT 480
AH LPTHFVLGRN KLQGLAA+ILKLWEKS+IAKIALKWGVPNTNNEQMA ELK+LTGGT
Sbjct: 421 AHPLPTHFVLGRNTKLQGLAAAILKLWEKSLIAKIALKWGVPNTNNEQMACELKSLTGGT 480
Query: 481 LLLRNKFLIILYRGNDFLPVGVADSIIQREIELQRWQLHEENSRLKASEFFCFDTGNVEE 540
LLLRNKF IILYRG DFLPVGVA+SIIQRE ELQRWQLHEENSRLKASE FCFDTGN+EE
Sbjct: 481 LLLRNKFFIILYRGKDFLPVGVANSIIQRETELQRWQLHEENSRLKASELFCFDTGNLEE 540
Query: 541 RGKAGTLADFKDVTVEYEDLSTGSTESKLQAEAEKEKIIRELRMQERRLNILNFKVEKST 600
R KAGTL+DFKD+T+EYEDL+TGSTESKLQA+AEK KIIREL+ QERRL+IL+FKVEKST
Sbjct: 541 RAKAGTLSDFKDITMEYEDLTTGSTESKLQADAEKGKIIRELKKQERRLSILDFKVEKST 600
Query: 601 KELTKLNASWRHVEPDADQELITNEERICFRKMGLKMDSCLTLGRRGVFDGVIEGLHQHW 660
KELTKLNAS RHVEPDADQELITNEERICFRKMGLKM SCLTLGRRG+FDGVIEGLHQHW
Sbjct: 601 KELTKLNASCRHVEPDADQELITNEERICFRKMGLKMHSCLTLGRRGIFDGVIEGLHQHW 660
Query: 661 KHREVVKVITMQRAFNQVIYTAKSLEAESGGVLVSVDKLKEGYAIIIFRGKNYKRPLHSV 720
KHREVVKVI+MQRAFNQV+ TAKSLEAESGG+L+SVDKL EGYAIIIFRGKNY+RPL SV
Sbjct: 661 KHREVVKVISMQRAFNQVLSTAKSLEAESGGILISVDKLNEGYAIIIFRGKNYRRPLRSV 720
Query: 721 SKNLLTKRKALSRSLEMQRIGSLKFFANQRQQK 749
SKNLLTK KAL RSLE QRIGSLKFFANQ++QK
Sbjct: 721 SKNLLTKGKALRRSLETQRIGSLKFFANQKRQK 736
BLAST of PI0027933 vs. NCBI nr
Match:
XP_011649926.1 (chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic [Cucumis sativus] >KGN63131.1 hypothetical protein Csa_021894 [Cucumis sativus])
HSP 1 Score: 1362.8 bits (3526), Expect = 0.0e+00
Identity = 699/752 (92.95%), Postives = 715/752 (95.08%), Query Frame = 0
Query: 1 MLPTTSFSSSLPRILIPPSFRSHSPL--FSTHNPISATSTPSQSSVLSDPPSISNAAVNL 60
MLPTTSFSSSLPR LIPPSFRSHSPL STHNPISATSTPSQSSVL +PPSISNAAVNL
Sbjct: 1 MLPTTSFSSSLPRSLIPPSFRSHSPLLHLSTHNPISATSTPSQSSVLPEPPSISNAAVNL 60
Query: 61 RTAPWMKAPLHLQPQQ--EEDVDPANPKRRNGSDGNGRDKCSRALGDRGIDKTGKYAMRR 120
RTAPWMKAPLHLQPQQ EE VDPANPKRRNGSDG+GRDKCSRALGD GIDKTGKYAMRR
Sbjct: 61 RTAPWMKAPLHLQPQQQEEEGVDPANPKRRNGSDGSGRDKCSRALGDSGIDKTGKYAMRR 120
Query: 121 IAKSIGKLQRNGDSGETRMKLEEVEFGDFDLEGFEEYGTRRRMPWEKDDDGIVLRRMKKK 180
IAKSIGKL+RNGD GETRMKLEEVEFG FDLEGFEE GTRRRMPWEKDDDGIVLRRMKKK
Sbjct: 121 IAKSIGKLRRNGDLGETRMKLEEVEFGGFDLEGFEESGTRRRMPWEKDDDGIVLRRMKKK 180
Query: 181 TVTSAELNLDRVLLERLKGEASKMEKWVKVNKVGVTQDVVNKIQFIWERNELAMLKFDVP 240
TVTSAELNLDRVLLERLKGEASKMEKWVKVNKVGVTQDVVN+IQF+WERNELAMLKFDVP
Sbjct: 181 TVTSAELNLDRVLLERLKGEASKMEKWVKVNKVGVTQDVVNQIQFMWERNELAMLKFDVP 240
Query: 241 LSRNMDRAREIVEMKTGGMVVWSKKNALVVYRGCNYPLSLKHSTKMQVDSSYCSKTQLLQ 300
LSRNMDRAREIVEMKTGGMVVWSKKNALVVYRGCNYPL+LKHSTK QV S
Sbjct: 241 LSRNMDRAREIVEMKTGGMVVWSKKNALVVYRGCNYPLNLKHSTKKQVHIS--------P 300
Query: 301 QNPVKVETDTHFSLSGHYESALNQSINDNDGEWEEASSFFLMHHGNLQPLSGSLYERETD 360
QNPVKVETDTHFSLSGHYES LN+SINDNDGEWEEASSFFL+ H NLQPLSGSLYERETD
Sbjct: 301 QNPVKVETDTHFSLSGHYESGLNRSINDNDGEWEEASSFFLIRHENLQPLSGSLYERETD 360
Query: 361 RLLDDLGPRFIDWWMHKPLPVDADMLPEVVPGYMPPFRRCPPYTKQNLTDAELQHLRKLA 420
RLLDDLGPRFIDWWMHKPLPVDADMLPEVVPGYMPPFRRCPPYTKQNLTDA LQHLRKLA
Sbjct: 361 RLLDDLGPRFIDWWMHKPLPVDADMLPEVVPGYMPPFRRCPPYTKQNLTDAGLQHLRKLA 420
Query: 421 HSLPTHFVLGRNRKLQGLAASILKLWEKSMIAKIALKWGVPNTNNEQMAFELKNLTGGTL 480
HSLPTHFVLGRNRKLQGLAASILKLWEKSMIAKIALKWGVPNT+NEQMA ELKNLTGGTL
Sbjct: 421 HSLPTHFVLGRNRKLQGLAASILKLWEKSMIAKIALKWGVPNTDNEQMALELKNLTGGTL 480
Query: 481 LLRNKFLIILYRGNDFLPVGVADSIIQREIELQRWQLHEENSRLKASEFFCFDTGNVEER 540
LLRNKF+IILYRGNDFLPVGVADSIIQRE+ELQRWQLHEENSRLKASEFFCFDT N+EER
Sbjct: 481 LLRNKFVIILYRGNDFLPVGVADSIIQREVELQRWQLHEENSRLKASEFFCFDTENMEER 540
Query: 541 GKAGTLADFKDVTVEYEDLSTGSTESKLQAEAEKEKIIRELRMQERRLNILNFKVEKSTK 600
GKAGTL+DFKD+TV YEDLSTGSTES+LQAEAEK KIIR LRMQERRL ILNFKVEKSTK
Sbjct: 541 GKAGTLSDFKDITVGYEDLSTGSTESRLQAEAEKGKIIRGLRMQERRLKILNFKVEKSTK 600
Query: 601 ELTKLNASWRHVEPDADQELITNEERICFRKMGLKMDSCLTLGRRGVFDGVIEGLHQHWK 660
ELTKLNASWR VEPDADQELITNEERICFRKMGLKMDSCLTLGRRGVFDGVIEGLHQHWK
Sbjct: 601 ELTKLNASWRRVEPDADQELITNEERICFRKMGLKMDSCLTLGRRGVFDGVIEGLHQHWK 660
Query: 661 HREVVKVITMQRAFNQVIYTAKSLEAESGGVLVSVDKLKEGYAIIIFRGKNYKRPLHSVS 720
HREVVKVITMQRAFNQV YTAK LEAESGG+LVSVDKLKEGYAIIIFRGKNYKRPLHSVS
Sbjct: 661 HREVVKVITMQRAFNQVNYTAKLLEAESGGILVSVDKLKEGYAIIIFRGKNYKRPLHSVS 720
Query: 721 KNLLTKRKALSRSLEMQRIGSLKFFANQRQQK 749
KNLLTKRKALSRSLEMQRIGSLKFFANQRQQK
Sbjct: 721 KNLLTKRKALSRSLEMQRIGSLKFFANQRQQK 744
BLAST of PI0027933 vs. NCBI nr
Match:
XP_008441260.1 (PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic [Cucumis melo])
HSP 1 Score: 1354.7 bits (3505), Expect = 0.0e+00
Identity = 693/750 (92.40%), Postives = 713/750 (95.07%), Query Frame = 0
Query: 1 MLPTTSFSSSLPRILIPPSFRSHSPL--FSTHNPISATSTPSQSSVLSDPPSISNAAVNL 60
MLPTTSFSS LP ILIPPSFRSHS L STH+PISAT TPSQSSVLS+PPSISNAA+NL
Sbjct: 1 MLPTTSFSSPLPTILIPPSFRSHSSLLHLSTHHPISATFTPSQSSVLSEPPSISNAALNL 60
Query: 61 RTAPWMKAPLHLQPQQEEDVDPANPKRRNGSDGNGRDKCSRALGDRGIDKTGKYAMRRIA 120
RTAPWMKAPLHLQ QQEE VDPANPKRRNGSD NG DKCSRALGDRGI+KTGKYAMRRIA
Sbjct: 61 RTAPWMKAPLHLQTQQEEGVDPANPKRRNGSDRNGGDKCSRALGDRGIEKTGKYAMRRIA 120
Query: 121 KSIGKLQRNGDSGETRMKLEEVEFGDFDLEGFEEYGTRRRMPWEKDDDGIVLRRMKKKTV 180
KSIGKL+RNGD GETRM LEEVEFGDFDLEGFEE GTRRRMPWEKDDDGIV RRMKKKT+
Sbjct: 121 KSIGKLRRNGDLGETRMNLEEVEFGDFDLEGFEESGTRRRMPWEKDDDGIVFRRMKKKTM 180
Query: 181 TSAELNLDRVLLERLKGEASKMEKWVKVNKVGVTQDVVNKIQFIWERNELAMLKFDVPLS 240
TSAELNLDR+LLERLK +ASKMEKWVKVNKVGVTQDVVN IQ WERNELAMLKFDVPLS
Sbjct: 181 TSAELNLDRLLLERLKAKASKMEKWVKVNKVGVTQDVVNNIQLKWERNELAMLKFDVPLS 240
Query: 241 RNMDRAREIVEMKTGGMVVWSKKNALVVYRGCNYPLSLKHSTKMQVDSSYCSKTQLLQQN 300
RNMDRAREIVEMKTGGMVVWSKKNALVVYRGCNYPL+LK STKMQVDSS CSKTQ+LQQN
Sbjct: 241 RNMDRAREIVEMKTGGMVVWSKKNALVVYRGCNYPLNLKPSTKMQVDSS-CSKTQVLQQN 300
Query: 301 PVKVETDTHFSLSGHYESALNQSINDNDGEWEEASSFFLMHHGNLQPLSGSLYERETDRL 360
PVKVETDTH SLSGHYES L+QS ND+DGEWEEASSFFLM HGNLQPLSGSLYERETDRL
Sbjct: 301 PVKVETDTHSSLSGHYESGLDQSRNDDDGEWEEASSFFLMRHGNLQPLSGSLYERETDRL 360
Query: 361 LDDLGPRFIDWWMHKPLPVDADMLPEVVPGYMPPFRRCPPYTKQNLTDAELQHLRKLAHS 420
LDDLGPRFIDWWMHKPLPVDADMLPEVVPGYMPPFRRCPPYTKQNLTDA LQHLRKLAHS
Sbjct: 361 LDDLGPRFIDWWMHKPLPVDADMLPEVVPGYMPPFRRCPPYTKQNLTDAGLQHLRKLAHS 420
Query: 421 LPTHFVLGRNRKLQGLAASILKLWEKSMIAKIALKWGVPNTNNEQMAFELKNLTGGTLLL 480
LPTHFVLGRNR LQGLA +ILKLWEKSMIAKIALKWGVPNTNNEQMAFELK LTGGTLLL
Sbjct: 421 LPTHFVLGRNRGLQGLAGAILKLWEKSMIAKIALKWGVPNTNNEQMAFELKKLTGGTLLL 480
Query: 481 RNKFLIILYRGNDFLPVGVADSIIQREIELQRWQLHEENSRLKASEFFCFDTGNVEERGK 540
RNKFLIILYRGNDFLPVGVADSIIQRE+ELQRWQLHEENSRLKASEFFCFDTGN+EERGK
Sbjct: 481 RNKFLIILYRGNDFLPVGVADSIIQRELELQRWQLHEENSRLKASEFFCFDTGNMEERGK 540
Query: 541 AGTLADFKDVTVEYEDLSTGSTESKLQAEAEKEKIIRELRMQERRLNILNFKVEKSTKEL 600
AGTL+DFKDVTVEYEDLST STESKLQAEA++ KIIRELRMQERRL ILNFKVEKSTKEL
Sbjct: 541 AGTLSDFKDVTVEYEDLSTESTESKLQAEAKRGKIIRELRMQERRLKILNFKVEKSTKEL 600
Query: 601 TKLNASWRHVEPDADQELITNEERICFRKMGLKMDSCLTLGRRGVFDGVIEGLHQHWKHR 660
TKLNASW VEPDADQELITNEERICFRKMGLKMDSCLTLGRRGVFDGVIEGLHQHWKHR
Sbjct: 601 TKLNASWSRVEPDADQELITNEERICFRKMGLKMDSCLTLGRRGVFDGVIEGLHQHWKHR 660
Query: 661 EVVKVITMQRAFNQVIYTAKSLEAESGGVLVSVDKLKEGYAIIIFRGKNYKRPLHSVSKN 720
EVVKVITMQRA NQV YTAK LEAESGG+LVSVDKLKEGYAIIIFRGKNYKRPLHSVSKN
Sbjct: 661 EVVKVITMQRALNQVNYTAKLLEAESGGILVSVDKLKEGYAIIIFRGKNYKRPLHSVSKN 720
Query: 721 LLTKRKALSRSLEMQRIGSLKFFANQRQQK 749
LLTKRKALSRSLEMQRIGSLKFFANQRQQ+
Sbjct: 721 LLTKRKALSRSLEMQRIGSLKFFANQRQQQ 749
BLAST of PI0027933 vs. NCBI nr
Match:
TYK06679.1 (chloroplastic group IIA intron splicing facilitator CRS1 [Cucumis melo var. makuwa])
HSP 1 Score: 1354.7 bits (3505), Expect = 0.0e+00
Identity = 693/750 (92.40%), Postives = 713/750 (95.07%), Query Frame = 0
Query: 1 MLPTTSFSSSLPRILIPPSFRSHSPL--FSTHNPISATSTPSQSSVLSDPPSISNAAVNL 60
MLPTTSFSS LP ILIPPSFRSHS L STH+PISAT TPSQSSVLS+PPSISNAA+NL
Sbjct: 1 MLPTTSFSSPLPTILIPPSFRSHSSLLHLSTHHPISATFTPSQSSVLSEPPSISNAALNL 60
Query: 61 RTAPWMKAPLHLQPQQEEDVDPANPKRRNGSDGNGRDKCSRALGDRGIDKTGKYAMRRIA 120
RTAPWMKAPLHLQ QQEE VDPANPKRRNGSD NG DKCSRALGDRGI+KTGKYAMRRIA
Sbjct: 61 RTAPWMKAPLHLQTQQEEGVDPANPKRRNGSDRNGGDKCSRALGDRGIEKTGKYAMRRIA 120
Query: 121 KSIGKLQRNGDSGETRMKLEEVEFGDFDLEGFEEYGTRRRMPWEKDDDGIVLRRMKKKTV 180
KSIGKL+RNGD GETRM LEEVEFGDFDLEGFEE GTRRRMPWEKDDDGIV RRMKKKT+
Sbjct: 121 KSIGKLRRNGDLGETRMNLEEVEFGDFDLEGFEESGTRRRMPWEKDDDGIVFRRMKKKTM 180
Query: 181 TSAELNLDRVLLERLKGEASKMEKWVKVNKVGVTQDVVNKIQFIWERNELAMLKFDVPLS 240
TSAELNLDR+LLERLK +ASKMEKWVKVNKVGVTQDVVN IQ WERNELAMLKFDVPLS
Sbjct: 181 TSAELNLDRLLLERLKAKASKMEKWVKVNKVGVTQDVVNNIQLKWERNELAMLKFDVPLS 240
Query: 241 RNMDRAREIVEMKTGGMVVWSKKNALVVYRGCNYPLSLKHSTKMQVDSSYCSKTQLLQQN 300
RNMDRAREIVEMKTGGMVVWSKKNALVVYRGCNYPL+LK STKMQVDSS CSKTQ+LQQN
Sbjct: 241 RNMDRAREIVEMKTGGMVVWSKKNALVVYRGCNYPLNLKPSTKMQVDSS-CSKTQVLQQN 300
Query: 301 PVKVETDTHFSLSGHYESALNQSINDNDGEWEEASSFFLMHHGNLQPLSGSLYERETDRL 360
PVKVETDTH SLSGHYES L+QS ND+DGEWEEASSFFLM HGNLQPLSGSLYERETDRL
Sbjct: 301 PVKVETDTHSSLSGHYESGLDQSRNDDDGEWEEASSFFLMRHGNLQPLSGSLYERETDRL 360
Query: 361 LDDLGPRFIDWWMHKPLPVDADMLPEVVPGYMPPFRRCPPYTKQNLTDAELQHLRKLAHS 420
LDDLGPRFIDWWMHKPLPVDADMLPEVVPGYMPPFRRCPPYTKQNLTDA LQHLRKLAHS
Sbjct: 361 LDDLGPRFIDWWMHKPLPVDADMLPEVVPGYMPPFRRCPPYTKQNLTDAGLQHLRKLAHS 420
Query: 421 LPTHFVLGRNRKLQGLAASILKLWEKSMIAKIALKWGVPNTNNEQMAFELKNLTGGTLLL 480
LPTHFVLGRNR LQGLA +ILKLWEKSMIAKIALKWGVPNTNNEQMAFELK LTGGTLLL
Sbjct: 421 LPTHFVLGRNRGLQGLAGAILKLWEKSMIAKIALKWGVPNTNNEQMAFELKKLTGGTLLL 480
Query: 481 RNKFLIILYRGNDFLPVGVADSIIQREIELQRWQLHEENSRLKASEFFCFDTGNVEERGK 540
RNKFLIILYRGNDFLPVGVADSIIQRE+ELQRWQLHEENSRLKASEFFCFDTGN+EERGK
Sbjct: 481 RNKFLIILYRGNDFLPVGVADSIIQRELELQRWQLHEENSRLKASEFFCFDTGNMEERGK 540
Query: 541 AGTLADFKDVTVEYEDLSTGSTESKLQAEAEKEKIIRELRMQERRLNILNFKVEKSTKEL 600
AGTL+DFKDVTVEYEDLST STESKLQAEA++ KIIRELRMQERRL ILNFKVEKSTKEL
Sbjct: 541 AGTLSDFKDVTVEYEDLSTESTESKLQAEAKRGKIIRELRMQERRLKILNFKVEKSTKEL 600
Query: 601 TKLNASWRHVEPDADQELITNEERICFRKMGLKMDSCLTLGRRGVFDGVIEGLHQHWKHR 660
TKLNASW VEPDADQELITNEERICFRKMGLKMDSCLTLGRRGVFDGVIEGLHQHWKHR
Sbjct: 601 TKLNASWSRVEPDADQELITNEERICFRKMGLKMDSCLTLGRRGVFDGVIEGLHQHWKHR 660
Query: 661 EVVKVITMQRAFNQVIYTAKSLEAESGGVLVSVDKLKEGYAIIIFRGKNYKRPLHSVSKN 720
EVVKVITMQRA NQV YTAK LEAESGG+LVSVDKLKEGYAIIIFRGKNYKRPLHSVSKN
Sbjct: 661 EVVKVITMQRALNQVNYTAKLLEAESGGILVSVDKLKEGYAIIIFRGKNYKRPLHSVSKN 720
Query: 721 LLTKRKALSRSLEMQRIGSLKFFANQRQQK 749
LLTKRKALSRSLEMQRIGSLKFFANQRQQ+
Sbjct: 721 LLTKRKALSRSLEMQRIGSLKFFANQRQQQ 749
BLAST of PI0027933 vs. NCBI nr
Match:
XP_038884367.1 (chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic isoform X2 [Benincasa hispida])
HSP 1 Score: 1311.2 bits (3392), Expect = 0.0e+00
Identity = 670/750 (89.33%), Postives = 703/750 (93.73%), Query Frame = 0
Query: 1 MLPTTSFSSSLPRILIPPSFRSHSPL--FSTHNPISATSTPSQSSVLSDPPSISNAAVNL 60
MLPTTSFS PRILIPPSFRS S L FS H PISATSTPSQSSVLS+PPS SNAAVNL
Sbjct: 1 MLPTTSFS---PRILIPPSFRSDSTLLHFSIHKPISATSTPSQSSVLSEPPSTSNAAVNL 60
Query: 61 RTAPWMKAPLHLQPQQEEDVDPANPKRRNGSDGNGRDKCSRALGDRGIDKTGKYAMRRIA 120
RTAPWMK PL+LQPQQEE VD A P+RRNGSDGNG +KCSRAL D IDKTGKYAMRRIA
Sbjct: 61 RTAPWMKGPLYLQPQQEEGVDLAKPERRNGSDGNGGEKCSRALADGRIDKTGKYAMRRIA 120
Query: 121 KSIGKLQRNGDSGETRMKLEEVEFGDFDLEGFEEYGTRRRMPWEKDDDGIVLRRMKKKTV 180
KSIGKLQ+NGDSGETRMKLEEVEFG F LEGFEE GTRRRMPWEK D+GIVLRR KKKTV
Sbjct: 121 KSIGKLQKNGDSGETRMKLEEVEFGGFYLEGFEESGTRRRMPWEK-DNGIVLRRTKKKTV 180
Query: 181 TSAELNLDRVLLERLKGEASKMEKWVKVNKVGVTQDVVNKIQFIWERNELAMLKFDVPLS 240
TSAELNLD++LLERL+ ASKMEKWVKVNKVGVT+DVVNKIQFIWERNELAMLKFDVPLS
Sbjct: 181 TSAELNLDKMLLERLRSAASKMEKWVKVNKVGVTEDVVNKIQFIWERNELAMLKFDVPLS 240
Query: 241 RNMDRAREIVEMKTGGMVVWSKKNALVVYRGCNYPLSLKHSTKMQVDSSYCSKTQLLQQN 300
RNMDRAREIVEMKTGGMVVWSKKN LVVYRGCNYPL LKHST+MQVDSSYCSKTQ++QQN
Sbjct: 241 RNMDRAREIVEMKTGGMVVWSKKNGLVVYRGCNYPLGLKHSTEMQVDSSYCSKTQVMQQN 300
Query: 301 PVKVETDTHFSLSGHYESALNQSINDNDGEWEEASSFFLMHHGNLQPLSGSLYERETDRL 360
PVK+ETD+ FS HYE+ LNQSINDNDGEWEE S+ FLMH GN QPLSGSLYERETDRL
Sbjct: 301 PVKLETDSDFS-GKHYENDLNQSINDNDGEWEETSTSFLMHQGNFQPLSGSLYERETDRL 360
Query: 361 LDDLGPRFIDWWMHKPLPVDADMLPEVVPGYMPPFRRCPPYTKQNLTDAELQHLRKLAHS 420
LDDLGPRFIDWWMHKPLPVDADMLPEVVPGYMPPFRRCPP+TK NLTDAEL HLRKLAHS
Sbjct: 361 LDDLGPRFIDWWMHKPLPVDADMLPEVVPGYMPPFRRCPPFTKPNLTDAELLHLRKLAHS 420
Query: 421 LPTHFVLGRNRKLQGLAASILKLWEKSMIAKIALKWGVPNTNNEQMAFELKNLTGGTLLL 480
LPTHFVLGRNRKLQGLAA+ILKLWEKS+IAKIALKWGVPNTNNEQMA ELK+LTGGTLLL
Sbjct: 421 LPTHFVLGRNRKLQGLAAAILKLWEKSLIAKIALKWGVPNTNNEQMACELKSLTGGTLLL 480
Query: 481 RNKFLIILYRGNDFLPVGVADSIIQREIELQRWQLHEENSRLKASEFFCFDTGNVEERGK 540
RNKFLIILYRG DFLPVGVA+SIIQRE+ELQRWQLHEENSRLKASE FCFDTGN+EER K
Sbjct: 481 RNKFLIILYRGKDFLPVGVANSIIQREMELQRWQLHEENSRLKASELFCFDTGNMEERAK 540
Query: 541 AGTLADFKDVTVEYEDLSTGSTESKLQAEAEKEKIIRELRMQERRLNILNFKVEKSTKEL 600
AGTL+DFKD+TVEY+DLSTGSTESKLQA+AEK KIIRELRMQERRL+ LNFKVEKS KEL
Sbjct: 541 AGTLSDFKDITVEYQDLSTGSTESKLQADAEKGKIIRELRMQERRLSNLNFKVEKSIKEL 600
Query: 601 TKLNASWRHVEPDADQELITNEERICFRKMGLKMDSCLTLGRRGVFDGVIEGLHQHWKHR 660
TKLNASWRHVEPDADQE ITNEERICFRKMGLKMDSCLTLGRRG+FDGVIEGLHQHWKHR
Sbjct: 601 TKLNASWRHVEPDADQEFITNEERICFRKMGLKMDSCLTLGRRGIFDGVIEGLHQHWKHR 660
Query: 661 EVVKVITMQRAFNQVIYTAKSLEAESGGVLVSVDKLKEGYAIIIFRGKNYKRPLHSVSKN 720
EVVKV+TMQRAFNQVIYTAKSLEAESGG+LVSVDKLKEGYAIIIFRGKNYKRPLHSV KN
Sbjct: 661 EVVKVVTMQRAFNQVIYTAKSLEAESGGILVSVDKLKEGYAIIIFRGKNYKRPLHSVPKN 720
Query: 721 LLTKRKALSRSLEMQRIGSLKFFANQRQQK 749
LLTKRKALSRSLEMQRIGSLKFFANQRQQ+
Sbjct: 721 LLTKRKALSRSLEMQRIGSLKFFANQRQQR 745
BLAST of PI0027933 vs. NCBI nr
Match:
XP_038884368.1 (chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic isoform X3 [Benincasa hispida])
HSP 1 Score: 1311.2 bits (3392), Expect = 0.0e+00
Identity = 670/750 (89.33%), Postives = 703/750 (93.73%), Query Frame = 0
Query: 1 MLPTTSFSSSLPRILIPPSFRSHSPL--FSTHNPISATSTPSQSSVLSDPPSISNAAVNL 60
MLPTTSFS PRILIPPSFRS S L FS H PISATSTPSQSSVLS+PPS SNAAVNL
Sbjct: 1 MLPTTSFS---PRILIPPSFRSDSTLLHFSIHKPISATSTPSQSSVLSEPPSTSNAAVNL 60
Query: 61 RTAPWMKAPLHLQPQQEEDVDPANPKRRNGSDGNGRDKCSRALGDRGIDKTGKYAMRRIA 120
RTAPWMK PL+LQPQQEE VD A P+RRNGSDGNG +KCSRAL D IDKTGKYAMRRIA
Sbjct: 61 RTAPWMKGPLYLQPQQEEGVDLAKPERRNGSDGNGGEKCSRALADGRIDKTGKYAMRRIA 120
Query: 121 KSIGKLQRNGDSGETRMKLEEVEFGDFDLEGFEEYGTRRRMPWEKDDDGIVLRRMKKKTV 180
KSIGKLQ+NGDSGETRMKLEEVEFG F LEGFEE GTRRRMPWEK D+GIVLRR KKKTV
Sbjct: 121 KSIGKLQKNGDSGETRMKLEEVEFGGFYLEGFEESGTRRRMPWEK-DNGIVLRRTKKKTV 180
Query: 181 TSAELNLDRVLLERLKGEASKMEKWVKVNKVGVTQDVVNKIQFIWERNELAMLKFDVPLS 240
TSAELNLD++LLERL+ ASKMEKWVKVNKVGVT+DVVNKIQFIWERNELAMLKFDVPLS
Sbjct: 181 TSAELNLDKMLLERLRSAASKMEKWVKVNKVGVTEDVVNKIQFIWERNELAMLKFDVPLS 240
Query: 241 RNMDRAREIVEMKTGGMVVWSKKNALVVYRGCNYPLSLKHSTKMQVDSSYCSKTQLLQQN 300
RNMDRAREIVEMKTGGMVVWSKKN LVVYRGCNYPL LKHST+MQVDSSYCSKTQ++QQN
Sbjct: 241 RNMDRAREIVEMKTGGMVVWSKKNGLVVYRGCNYPLGLKHSTEMQVDSSYCSKTQVMQQN 300
Query: 301 PVKVETDTHFSLSGHYESALNQSINDNDGEWEEASSFFLMHHGNLQPLSGSLYERETDRL 360
PVK+ETD+ FS HYE+ LNQSINDNDGEWEE S+ FLMH GN QPLSGSLYERETDRL
Sbjct: 301 PVKLETDSDFS-GKHYENDLNQSINDNDGEWEETSTSFLMHQGNFQPLSGSLYERETDRL 360
Query: 361 LDDLGPRFIDWWMHKPLPVDADMLPEVVPGYMPPFRRCPPYTKQNLTDAELQHLRKLAHS 420
LDDLGPRFIDWWMHKPLPVDADMLPEVVPGYMPPFRRCPP+TK NLTDAEL HLRKLAHS
Sbjct: 361 LDDLGPRFIDWWMHKPLPVDADMLPEVVPGYMPPFRRCPPFTKPNLTDAELLHLRKLAHS 420
Query: 421 LPTHFVLGRNRKLQGLAASILKLWEKSMIAKIALKWGVPNTNNEQMAFELKNLTGGTLLL 480
LPTHFVLGRNRKLQGLAA+ILKLWEKS+IAKIALKWGVPNTNNEQMA ELK+LTGGTLLL
Sbjct: 421 LPTHFVLGRNRKLQGLAAAILKLWEKSLIAKIALKWGVPNTNNEQMACELKSLTGGTLLL 480
Query: 481 RNKFLIILYRGNDFLPVGVADSIIQREIELQRWQLHEENSRLKASEFFCFDTGNVEERGK 540
RNKFLIILYRG DFLPVGVA+SIIQRE+ELQRWQLHEENSRLKASE FCFDTGN+EER K
Sbjct: 481 RNKFLIILYRGKDFLPVGVANSIIQREMELQRWQLHEENSRLKASELFCFDTGNMEERAK 540
Query: 541 AGTLADFKDVTVEYEDLSTGSTESKLQAEAEKEKIIRELRMQERRLNILNFKVEKSTKEL 600
AGTL+DFKD+TVEY+DLSTGSTESKLQA+AEK KIIRELRMQERRL+ LNFKVEKS KEL
Sbjct: 541 AGTLSDFKDITVEYQDLSTGSTESKLQADAEKGKIIRELRMQERRLSNLNFKVEKSIKEL 600
Query: 601 TKLNASWRHVEPDADQELITNEERICFRKMGLKMDSCLTLGRRGVFDGVIEGLHQHWKHR 660
TKLNASWRHVEPDADQE ITNEERICFRKMGLKMDSCLTLGRRG+FDGVIEGLHQHWKHR
Sbjct: 601 TKLNASWRHVEPDADQEFITNEERICFRKMGLKMDSCLTLGRRGIFDGVIEGLHQHWKHR 660
Query: 661 EVVKVITMQRAFNQVIYTAKSLEAESGGVLVSVDKLKEGYAIIIFRGKNYKRPLHSVSKN 720
EVVKV+TMQRAFNQVIYTAKSLEAESGG+LVSVDKLKEGYAIIIFRGKNYKRPLHSV KN
Sbjct: 661 EVVKVVTMQRAFNQVIYTAKSLEAESGGILVSVDKLKEGYAIIIFRGKNYKRPLHSVPKN 720
Query: 721 LLTKRKALSRSLEMQRIGSLKFFANQRQQK 749
LLTKRKALSRSLEMQRIGSLKFFANQRQQ+
Sbjct: 721 LLTKRKALSRSLEMQRIGSLKFFANQRQQR 745
BLAST of PI0027933 vs. TAIR 10
Match:
AT5G16180.1 (ortholog of maize chloroplast splicing factor CRS1 )
HSP 1 Score: 625.9 bits (1613), Expect = 4.2e-179
Identity = 362/725 (49.93%), Postives = 471/725 (64.97%), Query Frame = 0
Query: 31 NPISATSTPSQSSVLSDPPSISNAAVNLRTAPWMKAPLHLQPQQEEDVDPANPKRRNGSD 90
N S + SQ + +S+AA+ + TAPWMK PL L+P + D N R+
Sbjct: 56 NSSSRRAKSSQFDQFRENRGVSDAAIKVPTAPWMKGPLLLRPDEILDTKKRNKPRK---- 115
Query: 91 GNGRDKCSRALGDRGIDKTGKYAMRRIAKSIGKLQRNGDSGETRM-KLEEVEF-GDFD-- 150
+K +AL R GK AM++I +++ KL + DS ET+M L E E+ G +
Sbjct: 116 --VEEKTFKALNRRESGVRGKKAMKKIVRNVEKLDEDSDSEETQMDDLSEFEYLGRIEEK 175
Query: 151 LEGFEEYGTRRRMPWEKDDDGIVLRRMKKKTV-TSAELNLDRVLLERLKGEASKMEKWVK 210
+E + +G +MPWE++++ +LRRMKK++V T+AEL LD LL RL+ EASKM KWV
Sbjct: 176 VESKDRFG--GKMPWEREEERFILRRMKKESVPTTAELILDEGLLNRLRREASKMRKWVN 235
Query: 211 VNKVGVTQDVVNKIQFIWERNELAMLKFDVPLSRNMDRAREIVEMKTGGMVVWSKKNALV 270
V K GVT+ VVNKI+ +W+ NELAM++FDVPL RNM+RA+EI+EMKTGG+VV SKK LV
Sbjct: 236 VRKAGVTELVVNKIKSMWKLNELAMVRFDVPLCRNMERAQEIIEMKTGGLVVLSKKEFLV 295
Query: 271 VYRGCNYPLSLKHSTKMQVDSSYCSKTQLLQQNPVKVETDTHFSLSGHYESALNQSINDN 330
VYRG SY S+ Q
Sbjct: 296 VYRG---------------GPSYSSEGQ-------------------------------- 355
Query: 331 DGEWEEASSFFLMHHGNLQPLSGSLYERETDRLLDDLGPRFIDWWMHKPLPVDADMLPEV 390
+S SLYERE DRLLD LGPR++DWWM +P PVDAD+LPEV
Sbjct: 356 ------------------DEISSSLYEREADRLLDGLGPRYMDWWMRRPFPVDADLLPEV 415
Query: 391 VPGYMPPFRRCPPYTKQNLTDAELQHLRKLAHSLPTHFVLGRNRKLQGLAASILKLWEKS 450
V GYM P RRCPP T+ LTD EL +LR +A LP HFVLGRN LQGLA++I+KLWEK
Sbjct: 416 VNGYMTPSRRCPPNTRAKLTDEELTYLRNIAQPLPFHFVLGRNYGLQGLASAIVKLWEKC 475
Query: 451 MIAKIALKWGVPNTNNEQMAFELKNLTGGTLLLRNKFLIILYRGNDFLPVGVADSIIQRE 510
+IAKIA+KWG NTNNE+MA EL+ LTGG L+LRNK+LI+LYRG DFL VAD + RE
Sbjct: 476 IIAKIAIKWGALNTNNEEMADELRYLTGGVLILRNKYLIVLYRGKDFLSDEVADLVEDRE 535
Query: 511 IELQRWQLHEENSRLKASEFFCFDTG--NVEERGKAGTLADFKDVTVEYEDLSTGSTESK 570
L R+Q EE R E T ++E K+GTL +F+++ ++ ++
Sbjct: 536 RLLSRYQHFEETKRESDIELLEVVTNGKQLKETNKSGTLLEFQELQRKFGEMD----PRN 595
Query: 571 LQAEAEKEKIIRELRMQERRLNILNFKVEKSTKELTKLNASWRHVEPDADQELITNEERI 630
L+ EAEK ++ +EL+ QE +L+IL K+EKS EL KLN+ W+ E D D E++TNEER
Sbjct: 596 LETEAEKARLEKELKSQEHKLSILKSKIEKSNMELFKLNSLWKPSEGDDDIEILTNEERE 655
Query: 631 CFRKMGLKMDSCLTLGRRGVFDGVIEGLHQHWKHREVVKVITMQRAFNQVIYTAKSLEAE 690
C R++GLKM+S L LGRRGVF GV+EGLHQHWKHREV KVITMQ+ F++V+YTAK+LE E
Sbjct: 656 CLRRIGLKMNSSLVLGRRGVFFGVMEGLHQHWKHREVAKVITMQKLFSRVVYTAKALETE 703
Query: 691 SGGVLVSVDKLKEGYAIIIFRGKNYKRPLHS-VSKNLLTKRKALSRSLEMQRIGSLKFFA 748
S GVL+S++KLKEG+AI+I+RGKNYKRP +++NLLTKRKAL RS+ MQR+GSLKFFA
Sbjct: 716 SNGVLISIEKLKEGHAILIYRGKNYKRPSSKLMAQNLLTKRKALQRSVVMQRLGSLKFFA 703
BLAST of PI0027933 vs. TAIR 10
Match:
AT3G18390.1 (CRS1 / YhbY (CRM) domain-containing protein )
HSP 1 Score: 407.5 bits (1046), Expect = 2.4e-113
Identity = 241/588 (40.99%), Postives = 352/588 (59.86%), Query Frame = 0
Query: 159 MPWEKDDD-----------GI-VLRRMKKKTVTSAELNLDRVLLERLKGEASKMEKWVKV 218
+PWEK+++ G+ V+++ + + + AEL ++ L RL+ + + + +
Sbjct: 205 LPWEKNEEEQAAERVVGEGGVAVMQKRRARAPSLAELTVEDSELRRLRRDGMYLRVRINI 264
Query: 219 NKVGVTQDVVNKIQFIWERNELAMLKFDVPLSRNMDRAREIVEMKTGGMVVWSKKNALVV 278
K G+TQ V+ KI W + EL LKF L+R+M A EIVE +TGGMV+W + +VV
Sbjct: 265 PKAGLTQAVMEKIYDTWRKEELVRLKFHEVLARDMKTAHEIVERRTGGMVIWRAGSVMVV 324
Query: 279 YRGCNYPLSLKHSTKMQVDSSYCSKTQLLQQNPVKVETDTHFSLSGHYESALNQSINDND 338
YRG +Y K + N + +T F SA +++ N D
Sbjct: 325 YRGLDY------------------KGPPVISNQMAGPKETLF--VPDVSSAGDEATNAKD 384
Query: 339 GEWEEASSFFLMHHGNLQPLSGSLYERETDRLLDDLGPRFIDWWMHKPLPVDADMLPEVV 398
+ + ++ + + E E + LLD LGPRF +WW LPVDAD+LP +
Sbjct: 385 NQSAPLVIKDPIIKNPIRKENMTEEEVEFNSLLDSLGPRFQEWWGTGVLPVDADLLPPTI 444
Query: 399 PGYMPPFRRCPPYTKQNLTDAELQHLRKLAHSLPTHFVLGRNRKLQGLAASILKLWEKSM 458
PGY PFR P + NLT+AE+ +LRK+ +LP HF LGRNR QGLAA+IL++WEKS+
Sbjct: 445 PGYKTPFRLLPTGMRSNLTNAEMTNLRKIGKTLPCHFALGRNRNHQGLAAAILQIWEKSL 504
Query: 459 IAKIALKWGVPNTNNEQMAFELKNLTGGTLLLRNKFLIILYRGNDFLPVGVADSIIQREI 518
IAKIA+K G+ NTNN+ MA E+K LTGG LLLRNK+ I++YRG DFLP VA ++ +R+
Sbjct: 505 IAKIAVKRGIQNTNNKLMADEVKTLTGGVLLLRNKYYIVIYRGKDFLPSSVAATLAERQ- 564
Query: 519 ELQRWQLHEENSRLKASEFFCFDTGNVEERGKAGTLADFKDVTVEYEDLSTGSTESKLQA 578
EL + ++ + R++ E + +AGTLA+F + + T K+
Sbjct: 565 ELTK-EIQDVEERVRNREIEAVQPVGDKVPAEAGTLAEFYEAQARWGKEITPDHREKMIE 624
Query: 579 EAEKEKIIRELRMQERRLNILNFKVEKSTKELTKLNASWRHVEPDADQELITNEERICFR 638
EA + R ++ + +LN+ K +++ K L+K+ AS PD DQE+I+ EER FR
Sbjct: 625 EASRVANARVVKRIQHKLNLAQSKFQRAEKLLSKIEASMIPNGPDYDQEVISEEERAMFR 684
Query: 639 KMGLKMDSCLTLGRRGVFDGVIEGLHQHWKHREVVKVITMQRAFNQVIYTAKSLEAESGG 698
K+GLKM + L +G RGVFDGVIE +H HWKHRE+VK+I+ Q+ V TA+ LE ESGG
Sbjct: 685 KVGLKMKAYLPIGIRGVFDGVIENMHLHWKHRELVKLISKQKNQAFVEETARLLEYESGG 744
Query: 699 VLVSVDKLKEGYAIIIFRGKNYKRPLHSVSKNLLTKRKALSRSLEMQR 735
VLV+++K+ +G+A+I +RGKNY+RP+ +NLLTK KAL RS+ MQR
Sbjct: 745 VLVAIEKVPKGFALIYYRGKNYRRPISLRPRNLLTKAKALKRSIAMQR 770
BLAST of PI0027933 vs. TAIR 10
Match:
AT3G23070.1 (CRM family member 3A )
HSP 1 Score: 382.9 bits (982), Expect = 6.2e-106
Identity = 228/566 (40.28%), Postives = 328/566 (57.95%), Query Frame = 0
Query: 174 KKKTVTSAELNLDRVLLERLKGEASKMEKWVKVNKVGVTQDVVNKIQFIWERNELAMLKF 233
K+ + AE+ L L RL+ + +++ GVTQ V+ I+ W+ E+ LK
Sbjct: 210 KENRYSLAEMTLPESELRRLRNLTFRTASKMRIRGGGVTQVAVDAIKEKWKSAEIVRLKI 269
Query: 234 DVPLSRNMDRAREIVEMKTGGMVVWSKKNALVVYRGCNYPLSLKHSTKMQVDSSYCSKTQ 293
+ + NM + EI+E KTGG+V+W ++ +YRG +Y L K +
Sbjct: 270 EGASALNMRKMHEILEKKTGGLVIWRSGTSISLYRGVSYELPSGKWNKQR---------- 329
Query: 294 LLQQNPVKVETDTHFSLSGHYESALNQSINDNDGEWEEASSFFLMHHGNLQPLSGSLYER 353
+ ET + H E+ +D + Q YE
Sbjct: 330 -------REETPPEAVIENHDETTTMVDKSDEKVHLPQLEQETTSVEKKDQTSPVVEYED 389
Query: 354 ETDRLLDDLGPRFIDWWMHKPLPVDADMLPEVVPGYMPPFRRCPPYTKQNLTDAELQHLR 413
E D LLDDLGPRF+DW PLPVDAD+LP +P Y PPFR P + +L E LR
Sbjct: 390 ELDELLDDLGPRFMDWPGDNPLPVDADLLPGAIPDYEPPFRVLPYGVRSSLGPKEATALR 449
Query: 414 KLAHSLPTHFVLGRNRKLQGLAASILKLWEKSMIAKIALKWGVPNTNNEQMAFELKNLTG 473
+LA S+P HF LGR+R+LQGLA ++++LWEKSM+AKIA+K GV +T +E+MA +LK LTG
Sbjct: 450 RLARSIPPHFALGRSRQLQGLATAMVRLWEKSMLAKIAIKRGVQSTTSERMAEDLKKLTG 509
Query: 474 GTLLLRNKFLIILYRGNDFLPVGVADSIIQREIELQRWQLHEENSRLKASEFFCF-DTGN 533
G +L RNK ++ YRG +FL VAD+++++E ++ Q EE +RL+ S T
Sbjct: 510 GIMLSRNKDFLVFYRGKNFLSREVADALVEQERFVRTLQDEEEQARLRGSSALIVPSTEP 569
Query: 534 VEERGKAGTLADFKDVTVEY-EDLSTGSTESKLQAEAE---KEKIIRELRMQERRLNILN 593
+ AGTL + D T ++ ++L +++ E E E ++R+L ER+L
Sbjct: 570 ANKLVSAGTLGETLDATGKWGKNLDDDDHSDEVKQEVEILRHENLVRKL---ERKLAFAE 629
Query: 594 FKVEKSTKELTKLNASWRHVEPDADQELITNEERICFRKMGLKMDSCLTLGRRGVFDGVI 653
K+ K+ + L K+ + E D E IT+EER FRK+GLKM + L LGRRGVFDG +
Sbjct: 630 RKLLKAERGLAKVEVCLKPAEQREDPESITDEERFMFRKLGLKMKAFLLLGRRGVFDGTV 689
Query: 654 EGLHQHWKHREVVKVITMQRAFNQVIYTAKSLEAESGGVLVSVDKLKEGYAIIIFRGKNY 713
E +H HWK+RE+VK+I + F+ V A +LEAESGG+LVS+DK+ +GYAII++RG++Y
Sbjct: 690 ENMHLHWKYRELVKIIVKAKTFDGVKKVALALEAESGGILVSIDKVTKGYAIIVYRGQDY 749
Query: 714 KRPLHSVSKNLLTKRKALSRSLEMQR 735
KRP KNLLTKRKAL+RS+E+QR
Sbjct: 750 KRPTMLRPKNLLTKRKALARSIELQR 755
BLAST of PI0027933 vs. TAIR 10
Match:
AT4G29750.1 (CRS1 / YhbY (CRM) domain-containing protein )
HSP 1 Score: 375.2 bits (962), Expect = 1.3e-103
Identity = 259/715 (36.22%), Postives = 381/715 (53.29%), Query Frame = 0
Query: 62 PWMKAPLHLQPQQEEDVDPANPKRRNGSDGNGRDKCSRALGDRGIDKTGKYAMRR---IA 121
PW K +Q ++E+ + + N S GNG L D+ D Y+
Sbjct: 103 PWQKQEEQIQHHEDEEDEEGDESSSNLSSGNG-------LSDKRTDSNRLYSANEPWSFP 162
Query: 122 KSIGKLQ----RNGDS---GETRMKLEEVEFGDF-DLEGFEEY-----GTRRRMPWEKDD 181
+ G + NG S T + ++ F D+ + Y + R + + DD
Sbjct: 163 RPSGYMSAPWVNNGGSKGVNFTTSSEQGIQSSSFHDVTTVDRYRRDNDSSDRAVDSDLDD 222
Query: 182 D--GIV-------LRRMKKKTVTSAELNLDRVLLERLKGEASKMEKWVKVNKVGVTQDVV 241
G++ + R +K AE + L+RL+ A +M + VKV G+TQ +V
Sbjct: 223 GERGMIDSGNNKGIWRTRKSNTVEAERIVPEHELKRLRNVALRMVERVKVGSAGITQALV 282
Query: 242 NKIQFIWERNELAMLKFDVPLSRNMDRAREIVEMKTGGMVVWSKKNALVVYRGCNYPLSL 301
I WE +E+ LKF P S NM R E++E KTGG+V+W +++V+YRG +Y L
Sbjct: 283 EAIHEKWEVDEVVKLKFSEPYSLNMKRTHEVLEKKTGGLVIWRSGSSVVLYRGISYKLK- 342
Query: 302 KHSTKMQVDSSYCSKTQLLQQNPVKVETDTHFSLSGHYESALNQSINDNDGEWEEASSFF 361
C +T ++QN ++ + H +S+ D E+ +
Sbjct: 343 ------------CVQT-FIKQNNLEANPEIH------------RSVEARDYVQEDGNYPK 402
Query: 362 LMHHGNLQPLSGSLYERETDRLLDDLGPRFIDWWMHKPLPVDADMLPEVVPGYMPPFRRC 421
+ L L E + LLD++GPRF DW P PVDAD+LP V GY PFR
Sbjct: 403 NVPKEQLSELC------ELNDLLDEVGPRFHDWTGCAPFPVDADLLPGYVEGYRCPFRIL 462
Query: 422 PPYTKQNLTDAELQHLRKLAHSLPTHFVLGRNRKLQGLAASILKLWEKSMIAKIALKWGV 481
P K L++ E+ +R+LA + P HF LGR+R+LQGLA +++KLW KS IAKIA+K GV
Sbjct: 463 PQGVKPCLSNTEMTEMRRLARTSPPHFALGRSRELQGLAKAMVKLWAKSAIAKIAIKRGV 522
Query: 482 PNTNNEQMAFELKNLTGGTLLLRNKFLIILYRGNDFLPVGVADSIIQREIEL-QRWQLHE 541
NT NE+MA ELK LT G L+ RNK I+ YRGNDF+P VA+++ +R+ E+ + Q E
Sbjct: 523 ENTRNERMAEELKRLTRGVLVSRNKEYIVFYRGNDFMPPAVAEALTERQKEITEVLQAKE 582
Query: 542 ENSRLKASEFFCFDTGNVEERGK--AGTLADFKDVTVEYEDLSTGSTESKLQAEAEKEKI 601
+ +R AS + + + AGTLA+ + + ++ +L+ E+ K
Sbjct: 583 DQAREMASTRATLTSQAKSPKTQLLAGTLAETIAASSRWAPNASSVDIEELKRESASIKR 642
Query: 602 IRELRMQERRLNILNFKVEKSTKELTKLNASWRHVEPDADQELITNEERICFRKMGLKMD 661
+R E RL K+ ++ ++L K+ E D E+IT EER+ +RK+GL MD
Sbjct: 643 AALIRDLELRLLYGKQKLRRAERDLAKVQKDLDPSELPTDSEIITEEERLLYRKIGLSMD 702
Query: 662 SCLTLGRRGVFDGVIEGLHQHWKHREVVKVITMQRAFNQVIYTAKSLEAESGGVLVSVDK 721
L LGRR V+DG IE +H HWKHRE+VKVI ++ QV + A SLEAESGGVLVSVDK
Sbjct: 703 PFLLLGRREVYDGTIENMHLHWKHRELVKVIVRGKSLPQVKHIAISLEAESGGVLVSVDK 762
Query: 722 LKEGYAIIIFRGKNYKRPLHSVSKNLLTKRKALSRSLEMQRIGSLKFFANQRQQK 749
+GYAII++RGKNY+ P NLLT++KA +RS+E+QR +LK+ +++
Sbjct: 763 TMKGYAIILYRGKNYQMPFRLRPSNLLTRKKAFARSIELQRREALKYHVADLEER 778
BLAST of PI0027933 vs. TAIR 10
Match:
AT4G14510.1 (CRM family member 3B )
HSP 1 Score: 367.1 bits (941), Expect = 3.5e-101
Identity = 252/707 (35.64%), Postives = 370/707 (52.33%), Query Frame = 0
Query: 86 RNGSDGNGRDKCSRALGDRGIDKTGKYAM--------------RRIAKSIGKLQRNGDSG 145
R+G G G S ++ ++K KY RRI KS S
Sbjct: 111 RSGDVGGGSGSSSTM--EKIVEKLKKYGFVDEDQFQDKEVEQERRIEKS---------SV 170
Query: 146 ETRMKLEEVEFGDFDLEGFEEYG--TRRRMPWEKDDDGIVLRRMKKKTVTS--------- 205
E R +EE G + F YG + PWEK + M+KK + +
Sbjct: 171 EERFYVEERRGGFSEESPFGVYGGNDEVKFPWEK------VSSMEKKELVNGEWTAKKES 230
Query: 206 ----AELNLDRVLLERLKGEASKMEKWVKVNKVGVTQDVVNKIQFIWERNELAMLKFDVP 265
AE+ L L RL+ + + ++V GVTQ VV+ IQ W+ +E+ LK +
Sbjct: 231 RYSLAEMTLSEFELNRLRNVMFRTKSKMRVTGAGVTQAVVDAIQEKWKGSEIVRLKIEGS 290
Query: 266 LSRNMDRAREIVEMKTGGMVVWSKKNALVVYRGCNYPLSLKHSTKMQVDSSYCSKTQLLQ 325
+ NM R EI+E KTGG+V+W ++ +Y NY ++ + + L
Sbjct: 291 SALNMRRMHEILERKTGGLVIWRSGTSIALY---NYKGGSNRDGSGNMNKQVYRRAERL- 350
Query: 326 QNPVKVETDTHFSLSGHYESALNQSINDNDGEWEEASSFFLMHHGNLQPLSGSLYERETD 385
P + T T ++QS+ + E + + P YE E +
Sbjct: 351 --PSSLPTST-----------VDQSVQLVNLPQLEKEPTVVGNKDRTSPQEVE-YEDEIN 410
Query: 386 RLLDDLGPRFIDWWMHKPLPVDADMLPEVVPGYMPPFRRCPPYTKQNLTDAELQHLRKLA 445
LL+ LGPR+ DW PLPVDAD+LP +VPGY PPFR P + L E LR++A
Sbjct: 411 ELLEGLGPRYTDWQGGYPLPVDADLLPGIVPGYEPPFRALPYGVRSTLGTKEATSLRRIA 470
Query: 446 HSLPTHFVLGRNRKLQGLAASILKLWEKSMIAKIALKWGVPNTNNEQMAFELKNLTGGTL 505
LP HF LGR+R+LQGLA +++KLW+KS+IAK+ALK GV T +E+MA ++K LTGG L
Sbjct: 471 TVLPPHFALGRSRQLQGLATAMVKLWQKSLIAKVALKRGVQLTTSERMAEDIKRLTGGML 530
Query: 506 LLRNKFLIILYRGNDFLPVGVADSIIQREIELQRWQLHEENSRLKASEFFCFDT------ 565
L RNK ++ YRG FL + V ++++++E+ ++ Q EE +RL+AS +
Sbjct: 531 LSRNKDFLVFYRGKSFLSLEVGEALMEKEMLVRTLQDEEEQARLRASSALVVPSIKANQQ 590
Query: 566 -----GNVEERGK-----------------AGTLADFKDVTVEY-EDLSTGSTESKLQAE 625
+ EE+ + AGTL + D T ++ ++L +++ E
Sbjct: 591 LARTLQDKEEQARPSALVLPSTKANQNLVSAGTLGETLDATGKWGKNLDNDDHVEEMKQE 650
Query: 626 AEKEKIIRELRMQERRLNILNFKVEKSTKELTKLNASWRHVEPDADQELITNEERICFRK 685
EK + + +R ER+L K+ K+ + L K+ S + E D E IT EER F+K
Sbjct: 651 VEKVRSAKLVRKLERKLAFAEKKLLKAERALAKVEESLKPAEQRTDLEGITEEERFMFQK 710
Query: 686 MGLKMDSCLTLGRRGVFDGVIEGLHQHWKHREVVKVITMQRAFNQVIYTAKSLEAESGGV 735
+GLKM + L LGRRGVFDG +E +H HWK+RE++K++ + A +LEAESGG+
Sbjct: 711 LGLKMKAFLLLGRRGVFDGTVENMHLHWKYRELIKILVKAKTLEGAQKVAMALEAESGGI 770
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Q9LF10 | 5.9e-178 | 49.93 | Chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic OS=Arabi... | [more] |
Q6YYA3 | 4.4e-149 | 48.67 | Chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic OS=Oryza... | [more] |
Q9FYT6 | 3.2e-147 | 47.58 | Chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic OS=Zea m... | [more] |
Q2R1U8 | 1.8e-105 | 40.41 | CRM-domain containing factor CFM3, chloroplastic/mitochondrial OS=Oryza sativa s... | [more] |
F4J2U9 | 8.7e-105 | 40.28 | CRM-domain containing factor CFM3A, chloroplastic/mitochondrial OS=Arabidopsis t... | [more] |
Match Name | E-value | Identity | Description | |
A0A0A0LSY1 | 0.0e+00 | 92.95 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G404830 PE=4 SV=1 | [more] |
A0A5D3C8J4 | 0.0e+00 | 92.40 | Chloroplastic group IIA intron splicing facilitator CRS1 OS=Cucumis melo var. ma... | [more] |
A0A1S3B2K3 | 0.0e+00 | 92.40 | chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic OS=Cucum... | [more] |
A0A6J1JY40 | 0.0e+00 | 81.14 | chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic isoform ... | [more] |
A0A6J1FHM9 | 0.0e+00 | 81.27 | chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic OS=Cucur... | [more] |
Match Name | E-value | Identity | Description | |
XP_011649926.1 | 0.0e+00 | 92.95 | chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic [Cucumis... | [more] |
XP_008441260.1 | 0.0e+00 | 92.40 | PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1, chloroplast... | [more] |
TYK06679.1 | 0.0e+00 | 92.40 | chloroplastic group IIA intron splicing facilitator CRS1 [Cucumis melo var. maku... | [more] |
XP_038884367.1 | 0.0e+00 | 89.33 | chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic isoform ... | [more] |
XP_038884368.1 | 0.0e+00 | 89.33 | chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic isoform ... | [more] |