PI0027920 (gene) Melon (PI 482460) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CAAAATTCATTCGATTCTCTAACCAAAAGGAAAGTGACACGGTGAAGGTAGTCATAGGAGAGAGATAAGAGAAAGGGATTTGAAGAAGAAAAAGGAGATAGATTAATGGCGTACGCGCAGGCTTCGGTTTCGCTAAAAATATCTTTGCTTCTTCTTCTTCTTCTTCTTCATTCCTACGTGTTTCCTTCTTAACCCCACCGCCCCTTTCTTCTTCTCTCTCATCGCCACGTCGCCAATTCTCCTTTTCCCACAATCACTCCATCCTTATATTCCAAACCCACCAATCTTCTTCTTCCTCCAAATCCATTCTTTCACAGATGAAATCGATGAACCTACATCAACAAAACCTCGATTTACGCCTTTCAATCGGCGGACCTTTCACTAATTTACCGGAAAAGCTAAATGGGTCTGATCAAGAAAGCGGAGTTACGGATGTCAAGAACAGAGTCGACATCCGCCGAAGACAAGGGAAGAGGAAGCGGGAAGAAGATCCGAACAACAATCTGCCATTCAAAAATCGGAAAGGTAATTTGACGAACAATGTCGATCTTAATAAACCAGATCCTCCTCTGCAGATTTCATATCCTTATTCCTCGTTGCAATACGTTCCGTTTTTCAATGGCTATGGCTATGCGTACCCCTGTCTTGTTCCCTACTGGCCCCCTGTTGAGTCTCCGGTGGGTAGCCGGAGTGTTTCTGATGATGGGGTTTCGAATAAGAAATCTGGGTCCTGTGGATCTTCCCCAGTTTGTAGTTCCTCGGTTGTTTCTGATAATCATCACCATAGTTCTTCATCTCTTGAAGGTACTTTTCAATTTCTTTCAAACCCTAAATAAAATTTAAAAAAAAACTTAATCTGGGTTTTGTTTAATGGTTCATCATTATGAGAAATCAGATTTTAATTAGTTTTGTTGTTGTTCATCTTATTTCAGGTGGTAGTAGCAATTCAAGTAATTCATCAATATCTATGAAGCATGTTAAACCAAAGCCTTGTAATAAGAAAATTGTTGAAGATCAATCCTCTCAAGCGAAGAAATCTTCCTCATCTTCAATGGAGAATGGGAAACCTCCAAAGCCTCAAATCCAAACCCAGAATAATGTGGCAAGTTTTGAGCAAATGCCTTGTGTTTCAACAACAGGGATTGGTCCTAATGGTACCAAAATCATAACTACTGGCTTCTTGTATCGATACTCAAACTTGGAGGTTAGTATTTTGTGTGTCTGCCATGGACAATCCTTTTCGCCGGCCGAGTTCGTTAAGCACGGTGGCGGCGGAGAAGTTTCTCACCCTTTGAAACACATTACTGTTCTTCCACCTACTGGATTTTTCCCTTCTTCAATCAGATGAAACCTCATAGATTTTGATCTCGATCTTTGTAGCTTAACATTGTTTGTAGAGATCTGTGGCAATGTGGCTGACGATTTTGCTCCGATAGTATTTTGCATTTGTAATTAGTGGTTATTAGAGGTGTGTAGACTTTTTAATACCTGTTTAACTAATATCAAAAGACAGCCACATTACGACTGCATGCATTCTCTAATGATTTAATACGCAAAAGGGCTTGCAACAAATATTGCAACCTAGGTCATTTTAGCTTATTTATAATGGAGGTGGGGATTTGAACACACATATCTTTTGAGTTTAAAGTAGGTTTTAATCTTAAAGTTTTAGAAGTTTTATTTTCTTTTGAAGTGAGTATTTTCCAAGACAACCATTTCATTAGAGACATGAGAGAGATAAACAAAGAAATCAAGTATAGTGAAAATTAAGCCACGTATTTTCTTGATACATTTCTGATAATTGAGGATGAAAACTACTTTCTAATTTTCTTTTATTAACGACATGTTTTTTTTCCCTCAGAACTTCTCTTTTATTCAACTTTTTCAATGTTGGATTATTCGTAGTCAAAGCAATTATCAATTTTAATTATTGTATTGACTTTTTTCTAGTATTTGAATTTTCATATTCAAAGAGGTTGCCAATTTATATAATTGTATTAATTTTCTTATAA CAAAATTCATTCGATTCTCTAACCAAAAGGAAAGTGACACGGTGAAGGTAGTCATAGGAGAGAGATAAGAGAAAGGGATTTGAAGAAGAAAAAGGAGATAGATTAATGGCGTACGCGCAGGCTTCGGTTTCGCTAAAAATATCTTTGCTTCTTCTTCTTCTTCTTCTTCATTCCTACGTGTTTCCTTCTTAACCCCACCGCCCCTTTCTTCTTCTCTCTCATCGCCACGTCGCCAATTCTCCTTTTCCCACAATCACTCCATCCTTATATTCCAAACCCACCAATCTTCTTCTTCCTCCAAATCCATTCTTTCACAGATGAAATCGATGAACCTACATCAACAAAACCTCGATTTACGCCTTTCAATCGGCGGACCTTTCACTAATTTACCGGAAAAGCTAAATGGGTCTGATCAAGAAAGCGGAGTTACGGATGTCAAGAACAGAGTCGACATCCGCCGAAGACAAGGGAAGAGGAAGCGGGAAGAAGATCCGAACAACAATCTGCCATTCAAAAATCGGAAAGGTAATTTGACGAACAATGTCGATCTTAATAAACCAGATCCTCCTCTGCAGATTTCATATCCTTATTCCTCGTTGCAATACGTTCCGTTTTTCAATGGCTATGGCTATGCGTACCCCTGTCTTGTTCCCTACTGGCCCCCTGTTGAGTCTCCGGTGGGTAGCCGGAGTGTTTCTGATGATGGGGTTTCGAATAAGAAATCTGGGTCCTGTGGATCTTCCCCAGTTTGTAGTTCCTCGGTTGTTTCTGATAATCATCACCATAGTTCTTCATCTCTTGAAGGTGGTAGTAGCAATTCAAGTAATTCATCAATATCTATGAAGCATGTTAAACCAAAGCCTTGTAATAAGAAAATTGTTGAAGATCAATCCTCTCAAGCGAAGAAATCTTCCTCATCTTCAATGGAGAATGGGAAACCTCCAAAGCCTCAAATCCAAACCCAGAATAATGTGGCAAGTTTTGAGCAAATGCCTTGTGTTTCAACAACAGGGATTGGTCCTAATGGTACCAAAATCATAACTACTGGCTTCTTGTATCGATACTCAAACTTGGAGGTTAGTATTTTGTGTGTCTGCCATGGACAATCCTTTTCGCCGGCCGAGTTCGTTAAGCACGGTGGCGGCGGAGAAGTTTCTCACCCTTTGAAACACATTACTGTTCTTCCACCTACTGGATTTTTCCCTTCTTCAATCAGATGAAACCTCATAGATTTTGATCTCGATCTTTGTAGCTTAACATTGTTTGTAGAGATCTGTGGCAATGTGGCTGACGATTTTGCTCCGATAGTATTTTGCATTTGTAATTAGTGGTTATTAGAGGTGTGTAGACTTTTTAATACCTGTTTAACTAATATCAAAAGACAGCCACATTACGACTGCATGCATTCTCTAATGATTTAATACGCAAAAGGGCTTGCAACAAATATTGCAACCTAGGTCATTTTAGCTTATTTATAATGGAGGTGGGGATTTGAACACACATATCTTTTGAGTTTAAAGTAGGTTTTAATCTTAAAGTTTTAGAAGTTTTATTTTCTTTTGAAGTGAGTATTTTCCAAGACAACCATTTCATTAGAGACATGAGAGAGATAAACAAAGAAATCAAGTATAGTGAAAATTAAGCCACGTATTTTCTTGATACATTTCTGATAATTGAGGATGAAAACTACTTTCTAATTTTCTTTTATTAACGACATGTTTTTTTTCCCTCAGAACTTCTCTTTTATTCAACTTTTTCAATGTTGGATTATTCGTAGTCAAAGCAATTATCAATTTTAATTATTGTATTGACTTTTTTCTAGTATTTGAATTTTCATATTCAAAGAGGTTGCCAATTTATATAATTGTATTAATTTTCTTATAA ATGAAATCGATGAACCTACATCAACAAAACCTCGATTTACGCCTTTCAATCGGCGGACCTTTCACTAATTTACCGGAAAAGCTAAATGGGTCTGATCAAGAAAGCGGAGTTACGGATGTCAAGAACAGAGTCGACATCCGCCGAAGACAAGGGAAGAGGAAGCGGGAAGAAGATCCGAACAACAATCTGCCATTCAAAAATCGGAAAGGTAATTTGACGAACAATGTCGATCTTAATAAACCAGATCCTCCTCTGCAGATTTCATATCCTTATTCCTCGTTGCAATACGTTCCGTTTTTCAATGGCTATGGCTATGCGTACCCCTGTCTTGTTCCCTACTGGCCCCCTGTTGAGTCTCCGGTGGGTAGCCGGAGTGTTTCTGATGATGGGGTTTCGAATAAGAAATCTGGGTCCTGTGGATCTTCCCCAGTTTGTAGTTCCTCGGTTGTTTCTGATAATCATCACCATAGTTCTTCATCTCTTGAAGGTGGTAGTAGCAATTCAAGTAATTCATCAATATCTATGAAGCATGTTAAACCAAAGCCTTGTAATAAGAAAATTGTTGAAGATCAATCCTCTCAAGCGAAGAAATCTTCCTCATCTTCAATGGAGAATGGGAAACCTCCAAAGCCTCAAATCCAAACCCAGAATAATGTGGCAAGTTTTGAGCAAATGCCTTGTGTTTCAACAACAGGGATTGGTCCTAATGGTACCAAAATCATAACTACTGGCTTCTTGTATCGATACTCAAACTTGGAGGTTAGTATTTTGTGTGTCTGCCATGGACAATCCTTTTCGCCGGCCGAGTTCGTTAAGCACGGTGGCGGCGGAGAAGTTTCTCACCCTTTGAAACACATTACTGTTCTTCCACCTACTGGATTTTTCCCTTCTTCAATCAGATGA MKSMNLHQQNLDLRLSIGGPFTNLPEKLNGSDQESGVTDVKNRVDIRRRQGKRKREEDPNNNLPFKNRKGNLTNNVDLNKPDPPLQISYPYSSLQYVPFFNGYGYAYPCLVPYWPPVESPVGSRSVSDDGVSNKKSGSCGSSPVCSSSVVSDNHHHSSSSLEGGSSNSSNSSISMKHVKPKPCNKKIVEDQSSQAKKSSSSSMENGKPPKPQIQTQNNVASFEQMPCVSTTGIGPNGTKIITTGFLYRYSNLEVSILCVCHGQSFSPAEFVKHGGGGEVSHPLKHITVLPPTGFFPSSIR Homology
BLAST of PI0027920 vs. ExPASy Swiss-Prot
Match: Q94F39 (Ninja-family protein AFP3 OS=Arabidopsis thaliana OX=3702 GN=AFP3 PE=1 SV=1) HSP 1 Score: 89.0 bits (219), Expect = 1.0e-16 Identity = 73/187 (39.04%), Postives = 88/187 (47.06%), Query Frame = 0
BLAST of PI0027920 vs. ExPASy Swiss-Prot
Match: B1B5D3 (Ninja-family protein 1 OS=Triticum aestivum OX=4565 GN=AFP-A1 PE=3 SV=1) HSP 1 Score: 79.3 bits (194), Expect = 8.0e-14 Identity = 57/153 (37.25%), Postives = 80/153 (52.29%), Query Frame = 0
BLAST of PI0027920 vs. ExPASy Swiss-Prot
Match: Q9LQ98 (Ninja-family protein AFP1 OS=Arabidopsis thaliana OX=3702 GN=AFP1 PE=1 SV=1) HSP 1 Score: 78.6 bits (192), Expect = 1.4e-13 Identity = 55/148 (37.16%), Postives = 74/148 (50.00%), Query Frame = 0
BLAST of PI0027920 vs. ExPASy Swiss-Prot
Match: B1B5D4 (Ninja-family protein 2 OS=Triticum aestivum OX=4565 GN=AFP-B1 PE=3 SV=1) HSP 1 Score: 75.5 bits (184), Expect = 1.2e-12 Identity = 64/182 (35.16%), Postives = 92/182 (50.55%), Query Frame = 0
BLAST of PI0027920 vs. ExPASy Swiss-Prot
Match: Q9LMX5 (Ninja-family protein AFP2 OS=Arabidopsis thaliana OX=3702 GN=AFP2 PE=1 SV=1) HSP 1 Score: 74.3 bits (181), Expect = 2.6e-12 Identity = 59/170 (34.71%), Postives = 83/170 (48.82%), Query Frame = 0
BLAST of PI0027920 vs. ExPASy TrEMBL
Match: A0A5D3DQY3 (Ninja-family protein AFP2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1185G00180 PE=3 SV=1) HSP 1 Score: 567.8 bits (1462), Expect = 2.7e-158 Identity = 284/300 (94.67%), Postives = 288/300 (96.00%), Query Frame = 0
BLAST of PI0027920 vs. ExPASy TrEMBL
Match: A0A0A0L8T7 (TDBD domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G633290 PE=3 SV=1) HSP 1 Score: 547.0 bits (1408), Expect = 5.0e-152 Identity = 276/294 (93.88%), Postives = 279/294 (94.90%), Query Frame = 0
BLAST of PI0027920 vs. ExPASy TrEMBL
Match: A0A1S3CCD3 (uncharacterized protein LOC103499221 OS=Cucumis melo OX=3656 GN=LOC103499221 PE=4 SV=1) HSP 1 Score: 360.9 bits (925), Expect = 5.1e-96 Identity = 184/197 (93.40%), Postives = 186/197 (94.42%), Query Frame = 0
BLAST of PI0027920 vs. ExPASy TrEMBL
Match: A0A6J1HQF5 (ninja-family protein 4-like OS=Cucurbita maxima OX=3661 GN=LOC111466860 PE=3 SV=1) HSP 1 Score: 333.2 bits (853), Expect = 1.1e-87 Identity = 205/311 (65.92%), Postives = 227/311 (72.99%), Query Frame = 0
BLAST of PI0027920 vs. ExPASy TrEMBL
Match: A0A6J1HHX8 (ninja-family protein 4-like OS=Cucurbita moschata OX=3662 GN=LOC111463802 PE=3 SV=1) HSP 1 Score: 329.3 bits (843), Expect = 1.6e-86 Identity = 206/324 (63.58%), Postives = 230/324 (70.99%), Query Frame = 0
BLAST of PI0027920 vs. NCBI nr
Match: KAA0068079.1 (ninja-family protein AFP2-like [Cucumis melo var. makuwa] >TYK26063.1 ninja-family protein AFP2-like [Cucumis melo var. makuwa]) HSP 1 Score: 567.8 bits (1462), Expect = 5.7e-158 Identity = 284/300 (94.67%), Postives = 288/300 (96.00%), Query Frame = 0
BLAST of PI0027920 vs. NCBI nr
Match: XP_004144458.3 (ninja-family protein AFP3 [Cucumis sativus] >KAE8650858.1 hypothetical protein Csa_000898 [Cucumis sativus]) HSP 1 Score: 544.7 bits (1402), Expect = 5.1e-151 Identity = 275/294 (93.54%), Postives = 278/294 (94.56%), Query Frame = 0
BLAST of PI0027920 vs. NCBI nr
Match: XP_038888156.1 (LOW QUALITY PROTEIN: uncharacterized protein LOC120078043 [Benincasa hispida]) HSP 1 Score: 426.4 bits (1095), Expect = 2.0e-115 Identity = 235/305 (77.05%), Postives = 251/305 (82.30%), Query Frame = 0
BLAST of PI0027920 vs. NCBI nr
Match: XP_008460392.1 (PREDICTED: uncharacterized protein LOC103499221 [Cucumis melo]) HSP 1 Score: 360.9 bits (925), Expect = 1.1e-95 Identity = 184/197 (93.40%), Postives = 186/197 (94.42%), Query Frame = 0
BLAST of PI0027920 vs. NCBI nr
Match: XP_022967297.1 (ninja-family protein 4-like [Cucurbita maxima]) HSP 1 Score: 333.2 bits (853), Expect = 2.3e-87 Identity = 205/311 (65.92%), Postives = 227/311 (72.99%), Query Frame = 0
BLAST of PI0027920 vs. TAIR 10
Match: AT3G07250.1 (nuclear transport factor 2 (NTF2) family protein / RNA recognition motif (RRM)-containing protein ) HSP 1 Score: 114.0 bits (284), Expect = 2.1e-25 Identity = 103/307 (33.55%), Postives = 143/307 (46.58%), Query Frame = 0
BLAST of PI0027920 vs. TAIR 10
Match: AT3G29575.1 (ABI five binding protein 3 ) HSP 1 Score: 89.0 bits (219), Expect = 7.2e-18 Identity = 73/187 (39.04%), Postives = 88/187 (47.06%), Query Frame = 0
BLAST of PI0027920 vs. TAIR 10
Match: AT3G29575.3 (ABI five binding protein 3 ) HSP 1 Score: 89.0 bits (219), Expect = 7.2e-18 Identity = 73/187 (39.04%), Postives = 88/187 (47.06%), Query Frame = 0
BLAST of PI0027920 vs. TAIR 10
Match: AT3G29575.4 (ABI five binding protein 3 ) HSP 1 Score: 89.0 bits (219), Expect = 7.2e-18 Identity = 73/187 (39.04%), Postives = 88/187 (47.06%), Query Frame = 0
BLAST of PI0027920 vs. TAIR 10
Match: AT1G69260.1 (ABI five binding protein ) HSP 1 Score: 78.6 bits (192), Expect = 9.7e-15 Identity = 55/148 (37.16%), Postives = 74/148 (50.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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