PI0027896 (gene) Melon (PI 482460) v1

Overview


Name	PI0027896
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	GATA type zinc finger transcription factor family protein
Location	chr10: 15140763 .. 15143591 (+)
RNA-Seq Expression	PI0027896
Synteny	PI0027896

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTCACTATCCAAATCGTCAAAGCATATCCATGGCTAGACGACAGAAGACCGAAGTATAGAATAGAAAATACAAAGAGACAAGACGTTACTCTGCAGAATGCCGATGGTGCCGATGGTGGAGCTCCAGTACTGAAAAAAGTTGAAGAAGAAAGTCGCACCGGGACGGAGTAAAGTTTAAGCAAGCAATGTGTGTCTTTCCGGCAAAGATATTTCCTCAGATCCTTTTTCACTTTATCTCTTTTTTCCTCTATAAAGAAAATCGACGCTGTGAATAATCTATCATAAATTATTTGTTTCTGCCTTTCGCTTTATCTTTCATTTCATTATCTTTTTCTTCTCTGCTCCACTTGCTATAACCAAATACATTCGCTGCATTTTGTTACTTTTATGATTTGAGAGGTACCCATCTTCGATTCGATTGCATTTCAGTTCTAATCAAGATCTTGTTCCTTCAGCATTTTGATCTGGGTTTGATCCTTTTAGCTCATCGGTTTTATTTTCTGTGATTCCCAACTCATTGGTTGCAGTTTCTTTCTTCGTCTTCTGAAATTTTGATTCTGGGTTTTTGTGTTTTGATTGTGTTTGATTAAATGACAATAGGAGAAGAGAGTTTGTTTGATCGGGATTGCTTGGTGGGCTTTGAATTGGAGGAGATTCTGGTTGATTGGGAATAGTTAGATCTACTCTAAGGATTTTTAGCTATGTCGTTTATTGGCACCCAACAGAAGTGCAAAGCTTGTGAGAAAACTGTGTACCCTGTAGATCAGTTATCTGCTGATGGAGTTTCTTTCCACAAGTCGTGTTTCAAATGTAGCCATTGCAAAGGAACTCTTAAGGTACATCATCATATTTTCAGGACTGATTGATAGCTTCTCTTTTATGTTACCCTTAATCTTTAACTGTTTTGCCTCACTTGAACTTCAAAAGGAATGGAGAAAGTTGAAGGATCTTTAAGTTGAAAAGTTATAGGGAGTAAGGAACTGTTTTCAAAACAACAATAATTAAGAAAAGACAGTGTTTGGGTAACTGTTTTTATTTATCATCATTTTTTAGTTTTTATCCTGCAGATGATATGTTCTTCTGAACAATTAAAACTAGTTTTTCTCCCACGTTAATCTTAACCTTAAAAGCCATCCATCCATTTACAGAAAATCAAAACAGCAAAACAGCCTCCTAAACAAGCCCTTGGTTTCATTAATTATCTCTCTTCTCTCAGAACCATGTTTATAGAAATGTTCTCTCTCTACCTCTCTCTGGCTCCCTTCTTTTGAGGGTTTCATGCACTATTAGAGTGAGTGCTGTGTGGTGTTTAAAAGGCAAACAGATAAAATATAATTCCAGCTTATATATATATATATATATATATATATATTATCACTGAGCATTTTTTTGGGTCAGAATGTGAGAACTTGTTCTAAAATAACTTGTTAAATTCTTTCAGCTGAGTAATTATTCTTCAATGGAAGGTGTTCTGTACTGTAAGCCTCATTTTGAGCAGCTCTTCAAGGAAACTGGCAACTTCAGCAAGAACTTTCTATCTCGTATGTTCCAAACATTCGTCCAATATAGGAGACACTCTACATTATTGATCTTGTTACTATTGCTTGTTACCAACACCTTCTATACTTCTCTTTTTCTACAGCTGCGAAGTCCTCTGAGAAGCCAACTCCAGAGCTGGTAAATCTAAACCCAATGCTGCAATTTTTTGTTATTAAATTTATAAACAGTATGCTCATTCGGTAGCCTCTTGTTGATTTTCTAGACTAGGTCGCCAAGCAAAGCTGCCAGCATGTTTTCTGGGACACAAGAAAAATGTGCTACATGTGGAAAAACTGCATATCCGCTAGAGAAGGTTGGTTTAGAAGCCGTTGGAAAGATATCCAAACATTTAAAACCTGCTTAATCACATCAATATTCAATTTTCTCACCCTTTTCGAACCGTCTGCATATCTATGATGGACTGAATTATCTTTCTGTGGTTGTTTGAACTTGTTTAGCATTCTATTGTTTCGACATCTATATATCAACCTCTATAAGAAAGGCATATTCATCAAAGCTACTACATCTAGATGAGTTGGTTTTCTGAACGGCTTGAATGCTGCTCTTGTTTAAGCCAACTAGTGAACTTCATCTGTATGCTTTGAGGAACTGCGGAACTTACATGGTCTTAATTTGCTTGATCTATATTATGTCCTGCTGAGGTAGAAATGGTTGTATCTCAACTTTTAAGTAGTTTTTCTGGCATTGGTACTTTGTATGCATCTGTGCGGATGTTATTTTATCAGTAATGGATCGTGTGAATTGCTTTTATCCAGGTTACAGTTGAGAGTCAAGCCTATCACAAGTCATGTTTTAAATGCTCACACGGTGGCTGTTCTTTATCTCCATCAAACTATGCTGCACTTGATGGAATTTTGTACTGCAAACACCACTTTTCACAGCTTTTCAAGGAAAAGGGAAGCTACAACCATCTGATCAAATCTGCATCAATGAAGCGTCAAGCAGCAACCTCCGATCCGGACCCTTCAAAATTTGAGTCATAAACTTCCAATTTGTGGTTTTGTTGAGTCCATTTCCCTCTGCTTTCTTCCTTCCCCAGTGTGTTCTACTTTAATCCTCACGCTGTTGTGATTGGAAACAAAAAAGAAACTTGCATGAGTCTCCAGCTCGTCATGTTGAGCCAAATTGTTTGTTTGTTTGATTCATGGAACTTCAAACTAACCGTTTGAAAGTGGGCAATTATTTGCCTAAACTTTATGAAAACATTTTGCAATATTTGGTTTTGGGTTACTTGAAGATAGATATGGAGTCATTCTGTTCCTTGCTGAA

mRNA sequence

GTCACTATCCAAATCGTCAAAGCATATCCATGGCTAGACGACAGAAGACCGAAGTATAGAATAGAAAATACAAAGAGACAAGACGTTACTCTGCAGAATGCCGATGGTGCCGATGGTGGAGCTCCAGTACTGAAAAAAGTTGAAGAAGAAAGTCGCACCGGGACGGAGTAAAGTTTAAGCAAGCAATGTGTGTCTTTCCGGCAAAGATATTTCCTCAGATCCTTTTTCACTTTATCTCTTTTTTCCTCTATAAAGAAAATCGACGCTGTGAATAATCTATCATAAATTATTTGTTTCTGCCTTTCGCTTTATCTTTCATTTCATTATCTTTTTCTTCTCTGCTCCACTTGCTATAACCAAATACATTCGCTGCATTTTGTTACTTTTATGATTTGAGAGGTACCCATCTTCGATTCGATTGCATTTCAGTTCTAATCAAGATCTTGTTCCTTCAGCATTTTGATCTGGGTTTGATCCTTTTAGCTCATCGGTTTTATTTTCTGTGATTCCCAACTCATTGGTTGCAGTTTCTTTCTTCGTCTTCTGAAATTTTGATTCTGGGTTTTTGTGTTTTGATTGTGTTTGATTAAATGACAATAGGAGAAGAGAGTTTGTTTGATCGGGATTGCTTGGTGGGCTTTGAATTGGAGGAGATTCTGGTTGATTGGGAATAGTTAGATCTACTCTAAGGATTTTTAGCTATGTCGTTTATTGGCACCCAACAGAAGTGCAAAGCTTGTGAGAAAACTGTGTACCCTGTAGATCAGTTATCTGCTGATGGAGTTTCTTTCCACAAGTCGTGTTTCAAATGTAGCCATTGCAAAGGAACTCTTAAGCTGAGTAATTATTCTTCAATGGAAGGTGTTCTGTACTGTAAGCCTCATTTTGAGCAGCTCTTCAAGGAAACTGGCAACTTCAGCAAGAACTTTCTATCTCCTGCGAAGTCCTCTGAGAAGCCAACTCCAGAGCTGACTAGGTCGCCAAGCAAAGCTGCCAGCATGTTTTCTGGGACACAAGAAAAATGTGCTACATGTGGAAAAACTGCATATCCGCTAGAGAAGGTTACAGTTGAGAGTCAAGCCTATCACAAGTCATGTTTTAAATGCTCACACGGTGGCTGTTCTTTATCTCCATCAAACTATGCTGCACTTGATGGAATTTTGTACTGCAAACACCACTTTTCACAGCTTTTCAAGGAAAAGGGAAGCTACAACCATCTGATCAAATCTGCATCAATGAAGCGTCAAGCAGCAACCTCCGATCCGGACCCTTCAAAATTTGAGTCATAAACTTCCAATTTGTGGTTTTGTTGAGTCCATTTCCCTCTGCTTTCTTCCTTCCCCAGTGTGTTCTACTTTAATCCTCACGCTGTTGTGATTGGAAACAAAAAAGAAACTTGCATGAGTCTCCAGCTCGTCATGTTGAGCCAAATTGTTTGTTTGTTTGATTCATGGAACTTCAAACTAACCGTTTGAAAGTGGGCAATTATTTGCCTAAACTTTATGAAAACATTTTGCAATATTTGGTTTTGGGTTACTTGAAGATAGATATGGAGTCATTCTGTTCCTTGCTGAA

Coding sequence (CDS)

ATGTCGTTTATTGGCACCCAACAGAAGTGCAAAGCTTGTGAGAAAACTGTGTACCCTGTAGATCAGTTATCTGCTGATGGAGTTTCTTTCCACAAGTCGTGTTTCAAATGTAGCCATTGCAAAGGAACTCTTAAGCTGAGTAATTATTCTTCAATGGAAGGTGTTCTGTACTGTAAGCCTCATTTTGAGCAGCTCTTCAAGGAAACTGGCAACTTCAGCAAGAACTTTCTATCTCCTGCGAAGTCCTCTGAGAAGCCAACTCCAGAGCTGACTAGGTCGCCAAGCAAAGCTGCCAGCATGTTTTCTGGGACACAAGAAAAATGTGCTACATGTGGAAAAACTGCATATCCGCTAGAGAAGGTTACAGTTGAGAGTCAAGCCTATCACAAGTCATGTTTTAAATGCTCACACGGTGGCTGTTCTTTATCTCCATCAAACTATGCTGCACTTGATGGAATTTTGTACTGCAAACACCACTTTTCACAGCTTTTCAAGGAAAAGGGAAGCTACAACCATCTGATCAAATCTGCATCAATGAAGCGTCAAGCAGCAACCTCCGATCCGGACCCTTCAAAATTTGAGTCATAA

Protein sequence

MSFIGTQQKCKACEKTVYPVDQLSADGVSFHKSCFKCSHCKGTLKLSNYSSMEGVLYCKPHFEQLFKETGNFSKNFLSPAKSSEKPTPELTRSPSKAASMFSGTQEKCATCGKTAYPLEKVTVESQAYHKSCFKCSHGGCSLSPSNYAALDGILYCKHHFSQLFKEKGSYNHLIKSASMKRQAATSDPDPSKFES

Homology

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BLAST of PI0027896 vs. ExPASy Swiss-Prot
Match: Q9M047 (LIM domain-containing protein WLIM2b OS=Arabidopsis thaliana OX=3702 GN=WLIM2B PE=1 SV=1)

HSP 1 Score: 328.6 bits (841), Expect = 4.9e-89
Identity = 151/186 (81.18%), Postives = 169/186 (90.86%), Query Frame = 0


Query: 1   MSFIGTQQKCKACEKTVYPVDQLSADGVSFHKSCFKCSHCKGTLKLSNYSSMEGVLYCKP 60
           MSF GTQQKCKACEKTVY V+ LSADGV +HKSCFKC+HCK  L+LS+YSSMEGVLYCKP
Sbjct: 1   MSFTGTQQKCKACEKTVYAVELLSADGVGYHKSCFKCTHCKSRLQLSSYSSMEGVLYCKP 60

Query: 61  HFEQLFKETGNFSKNFLSPAKSSEKPTPELTRSPSKAASMFSGTQEKCATCGKTAYPLEK 120
           HFEQLFKE+G+F+KNF SPAKS++K TPELTR+PS+ A  FSGTQEKCATC KT YP+EK
Sbjct: 61  HFEQLFKESGSFNKNFQSPAKSADKSTPELTRTPSRVAGRFSGTQEKCATCSKTVYPIEK 120

Query: 121 VTVESQAYHKSCFKCSHGGCSLSPSNYAALDGILYCKHHFSQLFKEKGSYNHLIKSASMK 180
           VTVESQ YHKSCFKCSHGGC +SPSNYAAL+GILYCKHHF+QLFKEKGSYNHLIKSAS+K
Sbjct: 121 VTVESQTYHKSCFKCSHGGCPISPSNYAALEGILYCKHHFAQLFKEKGSYNHLIKSASIK 180

Query: 181 RQAATS 187
           R AA +
Sbjct: 181 RSAAAA 186

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BLAST of PI0027896 vs. ExPASy Swiss-Prot
Match: O04193 (LIM domain-containing protein WLIM2a OS=Arabidopsis thaliana OX=3702 GN=WLIN2A PE=1 SV=1)

HSP 1 Score: 325.1 bits (832), Expect = 5.4e-88
Identity = 149/187 (79.68%), Postives = 170/187 (90.91%), Query Frame = 0


Query: 1   MSFIGTQQKCKACEKTVYPVDQLSADGVSFHKSCFKCSHCKGTLKLSNYSSMEGVLYCKP 60
           MSF GTQQKC+ACEKTVYPV+ LSADG+S+HK+CFKCSHCK  L+LSNYSSMEGV+YC+P
Sbjct: 1   MSFTGTQQKCRACEKTVYPVELLSADGISYHKACFKCSHCKSRLQLSNYSSMEGVVYCRP 60

Query: 61  HFEQLFKETGNFSKNFLSPAKS-SEKPTPELTRSPSKAASMFSGTQEKCATCGKTAYPLE 120
           HFEQLFKE+G+FSKNF SPAK  ++KPTPEL R+PS+ A MFSGTQ+KCATC KT YP+E
Sbjct: 61  HFEQLFKESGSFSKNFQSPAKPLTDKPTPELNRTPSRLAGMFSGTQDKCATCTKTVYPIE 120

Query: 121 KVTVESQAYHKSCFKCSHGGCSLSPSNYAALDGILYCKHHFSQLFKEKGSYNHLIKSASM 180
           KVTVESQ YHKSCFKCSHGGC +SPSNYAAL+GILYCKHHF+QLFKEKGSYNHLIKSAS+
Sbjct: 121 KVTVESQCYHKSCFKCSHGGCPISPSNYAALEGILYCKHHFAQLFKEKGSYNHLIKSASI 180

Query: 181 KRQAATS 187
           KR  A +
Sbjct: 181 KRATAAA 187

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BLAST of PI0027896 vs. ExPASy Swiss-Prot
Match: O80839 (LIM domain-containing protein PLIM2a OS=Arabidopsis thaliana OX=3702 GN=PLIM2A PE=1 SV=1)

HSP 1 Score: 270.0 bits (689), Expect = 2.1e-71
Identity = 122/186 (65.59%), Postives = 157/186 (84.41%), Query Frame = 0


Query: 1   MSFIGTQQKCKACEKTVYPVDQLSADGVSFHKSCFKCSHCKGTLKLSNYSSMEGVLYCKP 60
           MSF GT  KCKAC+KTVY +D L+ +G ++HKSCF+C+HCKGTL +SNYSSM+GVLYCKP
Sbjct: 1   MSFTGTLDKCKACDKTVYVMDLLTLEGNTYHKSCFRCTHCKGTLVISNYSSMDGVLYCKP 60

Query: 61  HFEQLFKETGNFSKNFLSPAKSSEKPTPELTRSPSKAASMFSGTQEKCATCGKTAYPLEK 120
           HFEQLFKE+GN+SKNF   A  +EKP   LTR+PSK +S FSGTQ+KCATC KT YPLEK
Sbjct: 61  HFEQLFKESGNYSKNF--QAGKTEKPNDHLTRTPSKLSSFFSGTQDKCATCKKTVYPLEK 120

Query: 121 VTVESQAYHKSCFKCSHGGCSLSPSNYAALDGILYCKHHFSQLFKEKGSYNHLIKSASMK 180
           VT+E ++YHK+CF+C+H GC L+ S+YA+L+G+LYCK HF+QLF EKGSYNH+ ++A+  
Sbjct: 121 VTMEGESYHKTCFRCTHSGCPLTHSSYASLNGVLYCKVHFNQLFLEKGSYNHVHQAAANH 180

Query: 181 RQAATS 187
           R++A+S
Sbjct: 181 RRSASS 184

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BLAST of PI0027896 vs. ExPASy Swiss-Prot
Match: Q1ECF5 (LIM domain-containing protein PLIM2b OS=Arabidopsis thaliana OX=3702 GN=PLIM2B PE=1 SV=1)

HSP 1 Score: 264.2 bits (674), Expect = 1.1e-69
Identity = 118/194 (60.82%), Postives = 159/194 (81.96%), Query Frame = 0


Query: 1   MSFIGTQQKCKACEKTVYPVDQLSADGVSFHKSCFKCSHCKGTLKLSNYSSMEGVLYCKP 60
           MSF GT  KC  C+KTVY VD LS +G+ +HKSCF+C+HCKGTL++SNYSSM+GVLYCK 
Sbjct: 1   MSFTGTLDKCNVCDKTVYVVDMLSIEGMPYHKSCFRCTHCKGTLQMSNYSSMDGVLYCKT 60

Query: 61  HFEQLFKETGNFSKNFLSPAKSSEKPTPELTRSPSKAASMFSGTQEKCATCGKTAYPLEK 120
           HFEQLFKE+GNFSKNF  P K+ +   PELTR+PSK +S+F GTQ+KCA C KT YPLEK
Sbjct: 61  HFEQLFKESGNFSKNF-QPGKTEK---PELTRTPSKISSIFCGTQDKCAACEKTVYPLEK 120

Query: 121 VTVESQAYHKSCFKCSHGGCSLSPSNYAALDGILYCKHHFSQLFKEKGSYNHLIKSASMK 180
           + +E + +HK+CF+C+HGGC+L+ S+YA+LD +LYC+HHF+QLF EKG+Y H++++A+ +
Sbjct: 121 IQMEGECFHKTCFRCAHGGCTLTHSSYASLDSVLYCRHHFNQLFMEKGNYAHVLQAANHR 180

Query: 181 RQAA--TSDPDPSK 193
           R A+  T  P+P++
Sbjct: 181 RTASGNTLPPEPTE 190

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BLAST of PI0027896 vs. ExPASy Swiss-Prot
Match: Q7F9R9 (LIM domain-containing protein PLIM2b OS=Oryza sativa subsp. japonica OX=39947 GN=PLIM2B PE=1 SV=1)

HSP 1 Score: 261.2 bits (666), Expect = 9.7e-69
Identity = 119/177 (67.23%), Postives = 144/177 (81.36%), Query Frame = 0


Query: 1   MSFIGTQQKCKACEKTVYPVDQLSADGVSFHKSCFKCSHCKGTLKLSNYSSMEGVLYCKP 60
           MSF GTQ KC AC+KTV+ +D L+ADGV +HK+CFKCSHCKG L + +YSSM+GVLYCK 
Sbjct: 1   MSFTGTQDKCTACDKTVHFIDLLTADGVPYHKTCFKCSHCKGILSMCSYSSMDGVLYCKT 60

Query: 61  HFEQLFKETGNFSKNFLSPAKSSEKPTPELTRSPSKAASMFSGTQEKCATCGKTAYPLEK 120
           HFEQLFKETG+FSK F    +S++K   EL R+PSK  S FSGTQ+KCA C KT YPLEK
Sbjct: 61  HFEQLFKETGSFSKKFAPGCRSTDK---ELARAPSKICSAFSGTQDKCAACQKTVYPLEK 120

Query: 121 VTVESQAYHKSCFKCSHGGCSLSPSNYAALDGILYCKHHFSQLFKEKGSYNHLIKSA 178
           +T+E ++YHKSCFKCSHGGC L+ S+YAAL+G+LYCK HF QLF EKGSYNH+ K +
Sbjct: 121 LTLEGESYHKSCFKCSHGGCILTTSSYAALNGVLYCKIHFGQLFMEKGSYNHMKKKS 174

[Close]

BLAST of PI0027896 vs. ExPASy TrEMBL
Match: A0A0A0KQF5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G198170 PE=4 SV=1)

HSP 1 Score: 401.0 bits (1029), Expect = 2.9e-108
Identity = 192/195 (98.46%), Postives = 194/195 (99.49%), Query Frame = 0


Query: 1   MSFIGTQQKCKACEKTVYPVDQLSADGVSFHKSCFKCSHCKGTLKLSNYSSMEGVLYCKP 60
           MSFIGTQQKCKAC+KTVYPVDQLSADGVSFHKSCFKCSHCKGTLKLSNYSSM+GVLYCKP
Sbjct: 1   MSFIGTQQKCKACDKTVYPVDQLSADGVSFHKSCFKCSHCKGTLKLSNYSSMDGVLYCKP 60

Query: 61  HFEQLFKETGNFSKNFLSPAKSSEKPTPELTRSPSKAASMFSGTQEKCATCGKTAYPLEK 120
           HFEQLFKETGNFSKNFLSPAKSSEKPTPELTRSPSKAASMFSGTQEKCATCGKTAYPLEK
Sbjct: 61  HFEQLFKETGNFSKNFLSPAKSSEKPTPELTRSPSKAASMFSGTQEKCATCGKTAYPLEK 120

Query: 121 VTVESQAYHKSCFKCSHGGCSLSPSNYAALDGILYCKHHFSQLFKEKGSYNHLIKSASMK 180
           VTVESQAYHKSCFKCSHGGCSLSPSNYAALDGILYCKHHFSQLFKEKGSYNHLIKSASMK
Sbjct: 121 VTVESQAYHKSCFKCSHGGCSLSPSNYAALDGILYCKHHFSQLFKEKGSYNHLIKSASMK 180

Query: 181 RQAATSDPDPSKFES 196
           RQAATSDPDPSK ES
Sbjct: 181 RQAATSDPDPSKVES 195

[Close]

BLAST of PI0027896 vs. ExPASy TrEMBL
Match: A0A1S3CIM8 (LIM domain-containing protein WLIM2b-like OS=Cucumis melo OX=3656 GN=LOC103501413 PE=4 SV=1)

HSP 1 Score: 395.2 bits (1014), Expect = 1.6e-106
Identity = 189/195 (96.92%), Postives = 193/195 (98.97%), Query Frame = 0


Query: 1   MSFIGTQQKCKACEKTVYPVDQLSADGVSFHKSCFKCSHCKGTLKLSNYSSMEGVLYCKP 60
           MSFIGTQQKCKAC+KTVYPVDQLSADGVSFHKSCFKCSHCKGTLKLSNYSSM+GVLYCKP
Sbjct: 1   MSFIGTQQKCKACDKTVYPVDQLSADGVSFHKSCFKCSHCKGTLKLSNYSSMDGVLYCKP 60

Query: 61  HFEQLFKETGNFSKNFLSPAKSSEKPTPELTRSPSKAASMFSGTQEKCATCGKTAYPLEK 120
           HFEQLFKETGNFSKNFLSPAKSSEKPTPELTRSPS+AASMFSGTQEKCATCGKTAYPLEK
Sbjct: 61  HFEQLFKETGNFSKNFLSPAKSSEKPTPELTRSPSRAASMFSGTQEKCATCGKTAYPLEK 120

Query: 121 VTVESQAYHKSCFKCSHGGCSLSPSNYAALDGILYCKHHFSQLFKEKGSYNHLIKSASMK 180
           VTVESQAYHKSCFKCSHGGCSLSPSNYAAL+GILYCKHHFSQLFKEKGSYNHLIKSASMK
Sbjct: 121 VTVESQAYHKSCFKCSHGGCSLSPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMK 180

Query: 181 RQAATSDPDPSKFES 196
           RQAATSD DPSK ES
Sbjct: 181 RQAATSDSDPSKVES 195

[Close]

BLAST of PI0027896 vs. ExPASy TrEMBL
Match: A0A6J1DT64 (LIM domain-containing protein WLIM2b-like OS=Momordica charantia OX=3673 GN=LOC111023731 PE=4 SV=1)

HSP 1 Score: 388.7 bits (997), Expect = 1.5e-104
Identity = 186/194 (95.88%), Postives = 189/194 (97.42%), Query Frame = 0


Query: 1   MSFIGTQQKCKACEKTVYPVDQLSADGVSFHKSCFKCSHCKGTLKLSNYSSMEGVLYCKP 60
           MSFIGTQQKCKACEKTVYPVDQLSADGV+FHKSCFKCSHCKGTLKLSNYSSMEGVLYCKP
Sbjct: 1   MSFIGTQQKCKACEKTVYPVDQLSADGVAFHKSCFKCSHCKGTLKLSNYSSMEGVLYCKP 60

Query: 61  HFEQLFKETGNFSKNFLSPAKSSEKPTPELTRSPSKAASMFSGTQEKCATCGKTAYPLEK 120
           HFEQLFKETGNFSKNFLSPAKS++KPTPELTRSPSKAASMFSGTQEKCATCGKTAYPLEK
Sbjct: 61  HFEQLFKETGNFSKNFLSPAKSTDKPTPELTRSPSKAASMFSGTQEKCATCGKTAYPLEK 120

Query: 121 VTVESQAYHKSCFKCSHGGCSLSPSNYAALDGILYCKHHFSQLFKEKGSYNHLIKSASMK 180
           VTVESQAYHKSCFKCSHGGCSLSPSNYAALDGILYCKHHFSQLFKEKGSYNHLIKSASMK
Sbjct: 121 VTVESQAYHKSCFKCSHGGCSLSPSNYAALDGILYCKHHFSQLFKEKGSYNHLIKSASMK 180

Query: 181 RQAATSDPDPSKFE 195
           RQAATS PD    E
Sbjct: 181 RQAATSVPDAENVE 194

[Close]

BLAST of PI0027896 vs. ExPASy TrEMBL
Match: A0A6J1KBB9 (LIM domain-containing protein WLIM2a-like OS=Cucurbita maxima OX=3661 GN=LOC111491761 PE=4 SV=1)

HSP 1 Score: 387.5 bits (994), Expect = 3.3e-104
Identity = 185/194 (95.36%), Postives = 189/194 (97.42%), Query Frame = 0


Query: 1   MSFIGTQQKCKACEKTVYPVDQLSADGVSFHKSCFKCSHCKGTLKLSNYSSMEGVLYCKP 60
           MSFIGTQQKCKACEKTVYPVDQLSADGV+FHK CFKCSHCKGTLKLSNYSSMEGVLYCKP
Sbjct: 1   MSFIGTQQKCKACEKTVYPVDQLSADGVAFHKLCFKCSHCKGTLKLSNYSSMEGVLYCKP 60

Query: 61  HFEQLFKETGNFSKNFLSPAKSSEKPTPELTRSPSKAASMFSGTQEKCATCGKTAYPLEK 120
           HFEQLFKETGNFSKNFLSPAKS++KPTPEL RSPSKAA MFSGTQEKCATCGKTAYPLEK
Sbjct: 61  HFEQLFKETGNFSKNFLSPAKSADKPTPELNRSPSKAARMFSGTQEKCATCGKTAYPLEK 120

Query: 121 VTVESQAYHKSCFKCSHGGCSLSPSNYAALDGILYCKHHFSQLFKEKGSYNHLIKSASMK 180
           VTVESQAYHKSCFKCSHGGCSLSPSNYAALDGILYCKHHFSQLFKEKGSYNHLIKSASMK
Sbjct: 121 VTVESQAYHKSCFKCSHGGCSLSPSNYAALDGILYCKHHFSQLFKEKGSYNHLIKSASMK 180

Query: 181 RQAATSDPDPSKFE 195
           RQAATSDP+ SK E
Sbjct: 181 RQAATSDPNASKVE 194

[Close]

BLAST of PI0027896 vs. ExPASy TrEMBL
Match: A0A6J1GYT7 (LIM domain-containing protein WLIM2b OS=Cucurbita moschata OX=3662 GN=LOC111458736 PE=4 SV=1)

HSP 1 Score: 387.1 bits (993), Expect = 4.3e-104
Identity = 186/194 (95.88%), Postives = 187/194 (96.39%), Query Frame = 0


Query: 1   MSFIGTQQKCKACEKTVYPVDQLSADGVSFHKSCFKCSHCKGTLKLSNYSSMEGVLYCKP 60
           MSFIGTQQKCKACEKTVYPVDQLSADGV+FHKSCFKCSHC GTLKLSNYSSMEGVLYCKP
Sbjct: 1   MSFIGTQQKCKACEKTVYPVDQLSADGVAFHKSCFKCSHCSGTLKLSNYSSMEGVLYCKP 60

Query: 61  HFEQLFKETGNFSKNFLSPAKSSEKPTPELTRSPSKAASMFSGTQEKCATCGKTAYPLEK 120
           HFEQLFKE GNFSKNFLS AKSSEKPTPELTRSPSKAASMFSGTQEKCATCGKTAYPLEK
Sbjct: 61  HFEQLFKEAGNFSKNFLSTAKSSEKPTPELTRSPSKAASMFSGTQEKCATCGKTAYPLEK 120

Query: 121 VTVESQAYHKSCFKCSHGGCSLSPSNYAALDGILYCKHHFSQLFKEKGSYNHLIKSASMK 180
           VTVESQAYHKSCFKCSHGGCSLSPSNYAALDGILYCKHHFSQLFKEKGSYNHLIKSA MK
Sbjct: 121 VTVESQAYHKSCFKCSHGGCSLSPSNYAALDGILYCKHHFSQLFKEKGSYNHLIKSALMK 180

Query: 181 RQAATSDPDPSKFE 195
           RQ ATSDPD SK E
Sbjct: 181 RQVATSDPDTSKVE 194

[Close]

BLAST of PI0027896 vs. NCBI nr
Match: XP_004150238.1 (LIM domain-containing protein WLIM2b [Cucumis sativus] >XP_031741833.1 LIM domain-containing protein WLIM2b [Cucumis sativus] >KGN50627.1 hypothetical protein Csa_021390 [Cucumis sativus])

HSP 1 Score: 401.0 bits (1029), Expect = 6.0e-108
Identity = 192/195 (98.46%), Postives = 194/195 (99.49%), Query Frame = 0


Query: 1   MSFIGTQQKCKACEKTVYPVDQLSADGVSFHKSCFKCSHCKGTLKLSNYSSMEGVLYCKP 60
           MSFIGTQQKCKAC+KTVYPVDQLSADGVSFHKSCFKCSHCKGTLKLSNYSSM+GVLYCKP
Sbjct: 1   MSFIGTQQKCKACDKTVYPVDQLSADGVSFHKSCFKCSHCKGTLKLSNYSSMDGVLYCKP 60

Query: 61  HFEQLFKETGNFSKNFLSPAKSSEKPTPELTRSPSKAASMFSGTQEKCATCGKTAYPLEK 120
           HFEQLFKETGNFSKNFLSPAKSSEKPTPELTRSPSKAASMFSGTQEKCATCGKTAYPLEK
Sbjct: 61  HFEQLFKETGNFSKNFLSPAKSSEKPTPELTRSPSKAASMFSGTQEKCATCGKTAYPLEK 120

Query: 121 VTVESQAYHKSCFKCSHGGCSLSPSNYAALDGILYCKHHFSQLFKEKGSYNHLIKSASMK 180
           VTVESQAYHKSCFKCSHGGCSLSPSNYAALDGILYCKHHFSQLFKEKGSYNHLIKSASMK
Sbjct: 121 VTVESQAYHKSCFKCSHGGCSLSPSNYAALDGILYCKHHFSQLFKEKGSYNHLIKSASMK 180

Query: 181 RQAATSDPDPSKFES 196
           RQAATSDPDPSK ES
Sbjct: 181 RQAATSDPDPSKVES 195

[Close]

BLAST of PI0027896 vs. NCBI nr
Match: XP_038891809.1 (LIM domain-containing protein WLIM2b-like [Benincasa hispida] >XP_038891810.1 LIM domain-containing protein WLIM2b-like [Benincasa hispida] >XP_038891811.1 LIM domain-containing protein WLIM2b-like [Benincasa hispida])

HSP 1 Score: 397.9 bits (1021), Expect = 5.0e-107
Identity = 191/195 (97.95%), Postives = 193/195 (98.97%), Query Frame = 0


Query: 1   MSFIGTQQKCKACEKTVYPVDQLSADGVSFHKSCFKCSHCKGTLKLSNYSSMEGVLYCKP 60
           MSF+GTQQKCKACEKTVYPVDQLSADGV+FHKSCFKCSHCKGTLKLSNYSSMEGVLYCKP
Sbjct: 1   MSFVGTQQKCKACEKTVYPVDQLSADGVAFHKSCFKCSHCKGTLKLSNYSSMEGVLYCKP 60

Query: 61  HFEQLFKETGNFSKNFLSPAKSSEKPTPELTRSPSKAASMFSGTQEKCATCGKTAYPLEK 120
           HFEQLFKETGNFSKNFLSPAKSSEKPTPELTRSPSKAASMFSGTQEKCATCGKTAYPLEK
Sbjct: 61  HFEQLFKETGNFSKNFLSPAKSSEKPTPELTRSPSKAASMFSGTQEKCATCGKTAYPLEK 120

Query: 121 VTVESQAYHKSCFKCSHGGCSLSPSNYAALDGILYCKHHFSQLFKEKGSYNHLIKSASMK 180
           VTVESQAYHKSCFKCSHGGCSLSPSNYAALDGILYCKHHFSQLFKEKGSYNHLIKSASMK
Sbjct: 121 VTVESQAYHKSCFKCSHGGCSLSPSNYAALDGILYCKHHFSQLFKEKGSYNHLIKSASMK 180

Query: 181 RQAATSDPDPSKFES 196
           RQAATSD DPSK ES
Sbjct: 181 RQAATSDLDPSKVES 195

[Close]

BLAST of PI0027896 vs. NCBI nr
Match: XP_008463203.1 (PREDICTED: LIM domain-containing protein WLIM2b-like [Cucumis melo] >XP_008463204.1 PREDICTED: LIM domain-containing protein WLIM2b-like [Cucumis melo] >XP_008463205.1 PREDICTED: LIM domain-containing protein WLIM2b-like [Cucumis melo])

HSP 1 Score: 395.2 bits (1014), Expect = 3.3e-106
Identity = 189/195 (96.92%), Postives = 193/195 (98.97%), Query Frame = 0


Query: 1   MSFIGTQQKCKACEKTVYPVDQLSADGVSFHKSCFKCSHCKGTLKLSNYSSMEGVLYCKP 60
           MSFIGTQQKCKAC+KTVYPVDQLSADGVSFHKSCFKCSHCKGTLKLSNYSSM+GVLYCKP
Sbjct: 1   MSFIGTQQKCKACDKTVYPVDQLSADGVSFHKSCFKCSHCKGTLKLSNYSSMDGVLYCKP 60

Query: 61  HFEQLFKETGNFSKNFLSPAKSSEKPTPELTRSPSKAASMFSGTQEKCATCGKTAYPLEK 120
           HFEQLFKETGNFSKNFLSPAKSSEKPTPELTRSPS+AASMFSGTQEKCATCGKTAYPLEK
Sbjct: 61  HFEQLFKETGNFSKNFLSPAKSSEKPTPELTRSPSRAASMFSGTQEKCATCGKTAYPLEK 120

Query: 121 VTVESQAYHKSCFKCSHGGCSLSPSNYAALDGILYCKHHFSQLFKEKGSYNHLIKSASMK 180
           VTVESQAYHKSCFKCSHGGCSLSPSNYAAL+GILYCKHHFSQLFKEKGSYNHLIKSASMK
Sbjct: 121 VTVESQAYHKSCFKCSHGGCSLSPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMK 180

Query: 181 RQAATSDPDPSKFES 196
           RQAATSD DPSK ES
Sbjct: 181 RQAATSDSDPSKVES 195

[Close]

BLAST of PI0027896 vs. NCBI nr
Match: XP_023549082.1 (LIM domain-containing protein WLIM2b-like [Cucurbita pepo subsp. pepo] >XP_023549090.1 LIM domain-containing protein WLIM2b-like [Cucurbita pepo subsp. pepo] >XP_023549098.1 LIM domain-containing protein WLIM2b-like [Cucurbita pepo subsp. pepo] >XP_023549105.1 LIM domain-containing protein WLIM2b-like [Cucurbita pepo subsp. pepo] >XP_023549115.1 LIM domain-containing protein WLIM2b-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 389.4 bits (999), Expect = 1.8e-104
Identity = 186/194 (95.88%), Postives = 189/194 (97.42%), Query Frame = 0


Query: 1   MSFIGTQQKCKACEKTVYPVDQLSADGVSFHKSCFKCSHCKGTLKLSNYSSMEGVLYCKP 60
           MSFIGTQQKCKACEKTVYPVDQLSADGV+FHK CFKCSHCKGTLKLSNYSSMEGVLYCKP
Sbjct: 1   MSFIGTQQKCKACEKTVYPVDQLSADGVAFHKLCFKCSHCKGTLKLSNYSSMEGVLYCKP 60

Query: 61  HFEQLFKETGNFSKNFLSPAKSSEKPTPELTRSPSKAASMFSGTQEKCATCGKTAYPLEK 120
           HFEQLFKETGNFSKNFLSPAKS++KPTPELTRSPSKAA MFSGTQEKCATCGKTAYPLEK
Sbjct: 61  HFEQLFKETGNFSKNFLSPAKSADKPTPELTRSPSKAAGMFSGTQEKCATCGKTAYPLEK 120

Query: 121 VTVESQAYHKSCFKCSHGGCSLSPSNYAALDGILYCKHHFSQLFKEKGSYNHLIKSASMK 180
           VTVESQAYHKSCFKCSHGGCSLSPSNYAALDGILYCKHHFSQLFKEKGSYNHLIKSASMK
Sbjct: 121 VTVESQAYHKSCFKCSHGGCSLSPSNYAALDGILYCKHHFSQLFKEKGSYNHLIKSASMK 180

Query: 181 RQAATSDPDPSKFE 195
           RQAA SDPD SK E
Sbjct: 181 RQAAISDPDTSKVE 194

[Close]

BLAST of PI0027896 vs. NCBI nr
Match: XP_022156896.1 (LIM domain-containing protein WLIM2b-like [Momordica charantia] >XP_022156897.1 LIM domain-containing protein WLIM2b-like [Momordica charantia] >XP_022156898.1 LIM domain-containing protein WLIM2b-like [Momordica charantia])

HSP 1 Score: 388.7 bits (997), Expect = 3.1e-104
Identity = 186/194 (95.88%), Postives = 189/194 (97.42%), Query Frame = 0


Query: 1   MSFIGTQQKCKACEKTVYPVDQLSADGVSFHKSCFKCSHCKGTLKLSNYSSMEGVLYCKP 60
           MSFIGTQQKCKACEKTVYPVDQLSADGV+FHKSCFKCSHCKGTLKLSNYSSMEGVLYCKP
Sbjct: 1   MSFIGTQQKCKACEKTVYPVDQLSADGVAFHKSCFKCSHCKGTLKLSNYSSMEGVLYCKP 60

Query: 61  HFEQLFKETGNFSKNFLSPAKSSEKPTPELTRSPSKAASMFSGTQEKCATCGKTAYPLEK 120
           HFEQLFKETGNFSKNFLSPAKS++KPTPELTRSPSKAASMFSGTQEKCATCGKTAYPLEK
Sbjct: 61  HFEQLFKETGNFSKNFLSPAKSTDKPTPELTRSPSKAASMFSGTQEKCATCGKTAYPLEK 120

Query: 121 VTVESQAYHKSCFKCSHGGCSLSPSNYAALDGILYCKHHFSQLFKEKGSYNHLIKSASMK 180
           VTVESQAYHKSCFKCSHGGCSLSPSNYAALDGILYCKHHFSQLFKEKGSYNHLIKSASMK
Sbjct: 121 VTVESQAYHKSCFKCSHGGCSLSPSNYAALDGILYCKHHFSQLFKEKGSYNHLIKSASMK 180

Query: 181 RQAATSDPDPSKFE 195
           RQAATS PD    E
Sbjct: 181 RQAATSVPDAENVE 194

[Close]

BLAST of PI0027896 vs. TAIR 10
Match: AT3G55770.1 (GATA type zinc finger transcription factor family protein )

HSP 1 Score: 328.6 bits (841), Expect = 3.5e-90
Identity = 151/186 (81.18%), Postives = 169/186 (90.86%), Query Frame = 0


Query: 1   MSFIGTQQKCKACEKTVYPVDQLSADGVSFHKSCFKCSHCKGTLKLSNYSSMEGVLYCKP 60
           MSF GTQQKCKACEKTVY V+ LSADGV +HKSCFKC+HCK  L+LS+YSSMEGVLYCKP
Sbjct: 1   MSFTGTQQKCKACEKTVYAVELLSADGVGYHKSCFKCTHCKSRLQLSSYSSMEGVLYCKP 60

Query: 61  HFEQLFKETGNFSKNFLSPAKSSEKPTPELTRSPSKAASMFSGTQEKCATCGKTAYPLEK 120
           HFEQLFKE+G+F+KNF SPAKS++K TPELTR+PS+ A  FSGTQEKCATC KT YP+EK
Sbjct: 61  HFEQLFKESGSFNKNFQSPAKSADKSTPELTRTPSRVAGRFSGTQEKCATCSKTVYPIEK 120

Query: 121 VTVESQAYHKSCFKCSHGGCSLSPSNYAALDGILYCKHHFSQLFKEKGSYNHLIKSASMK 180
           VTVESQ YHKSCFKCSHGGC +SPSNYAAL+GILYCKHHF+QLFKEKGSYNHLIKSAS+K
Sbjct: 121 VTVESQTYHKSCFKCSHGGCPISPSNYAALEGILYCKHHFAQLFKEKGSYNHLIKSASIK 180

Query: 181 RQAATS 187
           R AA +
Sbjct: 181 RSAAAA 186

[Close]

BLAST of PI0027896 vs. TAIR 10
Match: AT3G55770.2 (GATA type zinc finger transcription factor family protein )

HSP 1 Score: 328.6 bits (841), Expect = 3.5e-90
Identity = 151/186 (81.18%), Postives = 169/186 (90.86%), Query Frame = 0


Query: 1   MSFIGTQQKCKACEKTVYPVDQLSADGVSFHKSCFKCSHCKGTLKLSNYSSMEGVLYCKP 60
           MSF GTQQKCKACEKTVY V+ LSADGV +HKSCFKC+HCK  L+LS+YSSMEGVLYCKP
Sbjct: 1   MSFTGTQQKCKACEKTVYAVELLSADGVGYHKSCFKCTHCKSRLQLSSYSSMEGVLYCKP 60

Query: 61  HFEQLFKETGNFSKNFLSPAKSSEKPTPELTRSPSKAASMFSGTQEKCATCGKTAYPLEK 120
           HFEQLFKE+G+F+KNF SPAKS++K TPELTR+PS+ A  FSGTQEKCATC KT YP+EK
Sbjct: 61  HFEQLFKESGSFNKNFQSPAKSADKSTPELTRTPSRVAGRFSGTQEKCATCSKTVYPIEK 120

Query: 121 VTVESQAYHKSCFKCSHGGCSLSPSNYAALDGILYCKHHFSQLFKEKGSYNHLIKSASMK 180
           VTVESQ YHKSCFKCSHGGC +SPSNYAAL+GILYCKHHF+QLFKEKGSYNHLIKSAS+K
Sbjct: 121 VTVESQTYHKSCFKCSHGGCPISPSNYAALEGILYCKHHFAQLFKEKGSYNHLIKSASIK 180

Query: 181 RQAATS 187
           R AA +
Sbjct: 181 RSAAAA 186

[Close]

BLAST of PI0027896 vs. TAIR 10
Match: AT3G55770.3 (GATA type zinc finger transcription factor family protein )

HSP 1 Score: 328.6 bits (841), Expect = 3.5e-90
Identity = 151/186 (81.18%), Postives = 169/186 (90.86%), Query Frame = 0


Query: 1   MSFIGTQQKCKACEKTVYPVDQLSADGVSFHKSCFKCSHCKGTLKLSNYSSMEGVLYCKP 60
           MSF GTQQKCKACEKTVY V+ LSADGV +HKSCFKC+HCK  L+LS+YSSMEGVLYCKP
Sbjct: 1   MSFTGTQQKCKACEKTVYAVELLSADGVGYHKSCFKCTHCKSRLQLSSYSSMEGVLYCKP 60

Query: 61  HFEQLFKETGNFSKNFLSPAKSSEKPTPELTRSPSKAASMFSGTQEKCATCGKTAYPLEK 120
           HFEQLFKE+G+F+KNF SPAKS++K TPELTR+PS+ A  FSGTQEKCATC KT YP+EK
Sbjct: 61  HFEQLFKESGSFNKNFQSPAKSADKSTPELTRTPSRVAGRFSGTQEKCATCSKTVYPIEK 120

Query: 121 VTVESQAYHKSCFKCSHGGCSLSPSNYAALDGILYCKHHFSQLFKEKGSYNHLIKSASMK 180
           VTVESQ YHKSCFKCSHGGC +SPSNYAAL+GILYCKHHF+QLFKEKGSYNHLIKSAS+K
Sbjct: 121 VTVESQTYHKSCFKCSHGGCPISPSNYAALEGILYCKHHFAQLFKEKGSYNHLIKSASIK 180

Query: 181 RQAATS 187
           R AA +
Sbjct: 181 RSAAAA 186

[Close]

BLAST of PI0027896 vs. TAIR 10
Match: AT3G55770.4 (GATA type zinc finger transcription factor family protein )

HSP 1 Score: 328.6 bits (841), Expect = 3.5e-90
Identity = 151/186 (81.18%), Postives = 169/186 (90.86%), Query Frame = 0


Query: 1   MSFIGTQQKCKACEKTVYPVDQLSADGVSFHKSCFKCSHCKGTLKLSNYSSMEGVLYCKP 60
           MSF GTQQKCKACEKTVY V+ LSADGV +HKSCFKC+HCK  L+LS+YSSMEGVLYCKP
Sbjct: 1   MSFTGTQQKCKACEKTVYAVELLSADGVGYHKSCFKCTHCKSRLQLSSYSSMEGVLYCKP 60

Query: 61  HFEQLFKETGNFSKNFLSPAKSSEKPTPELTRSPSKAASMFSGTQEKCATCGKTAYPLEK 120
           HFEQLFKE+G+F+KNF SPAKS++K TPELTR+PS+ A  FSGTQEKCATC KT YP+EK
Sbjct: 61  HFEQLFKESGSFNKNFQSPAKSADKSTPELTRTPSRVAGRFSGTQEKCATCSKTVYPIEK 120

Query: 121 VTVESQAYHKSCFKCSHGGCSLSPSNYAALDGILYCKHHFSQLFKEKGSYNHLIKSASMK 180
           VTVESQ YHKSCFKCSHGGC +SPSNYAAL+GILYCKHHF+QLFKEKGSYNHLIKSAS+K
Sbjct: 121 VTVESQTYHKSCFKCSHGGCPISPSNYAALEGILYCKHHFAQLFKEKGSYNHLIKSASIK 180

Query: 181 RQAATS 187
           R AA +
Sbjct: 181 RSAAAA 186

[Close]

BLAST of PI0027896 vs. TAIR 10
Match: AT3G55770.5 (GATA type zinc finger transcription factor family protein )

HSP 1 Score: 328.6 bits (841), Expect = 3.5e-90
Identity = 151/186 (81.18%), Postives = 169/186 (90.86%), Query Frame = 0


Query: 1   MSFIGTQQKCKACEKTVYPVDQLSADGVSFHKSCFKCSHCKGTLKLSNYSSMEGVLYCKP 60
           MSF GTQQKCKACEKTVY V+ LSADGV +HKSCFKC+HCK  L+LS+YSSMEGVLYCKP
Sbjct: 1   MSFTGTQQKCKACEKTVYAVELLSADGVGYHKSCFKCTHCKSRLQLSSYSSMEGVLYCKP 60

Query: 61  HFEQLFKETGNFSKNFLSPAKSSEKPTPELTRSPSKAASMFSGTQEKCATCGKTAYPLEK 120
           HFEQLFKE+G+F+KNF SPAKS++K TPELTR+PS+ A  FSGTQEKCATC KT YP+EK
Sbjct: 61  HFEQLFKESGSFNKNFQSPAKSADKSTPELTRTPSRVAGRFSGTQEKCATCSKTVYPIEK 120

Query: 121 VTVESQAYHKSCFKCSHGGCSLSPSNYAALDGILYCKHHFSQLFKEKGSYNHLIKSASMK 180
           VTVESQ YHKSCFKCSHGGC +SPSNYAAL+GILYCKHHF+QLFKEKGSYNHLIKSAS+K
Sbjct: 121 VTVESQTYHKSCFKCSHGGCPISPSNYAALEGILYCKHHFAQLFKEKGSYNHLIKSASIK 180

Query: 181 RQAATS 187
           R AA +
Sbjct: 181 RSAAAA 186

The following BLAST results are available for this feature:

BLAST of PI0027896 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M047	4.9e-89	81.18	LIM domain-containing protein WLIM2b OS=Arabidopsis thaliana OX=3702 GN=WLIM2B P...	[more]
O04193	5.4e-88	79.68	LIM domain-containing protein WLIM2a OS=Arabidopsis thaliana OX=3702 GN=WLIN2A P...	[more]
O80839	2.1e-71	65.59	LIM domain-containing protein PLIM2a OS=Arabidopsis thaliana OX=3702 GN=PLIM2A P...	[more]
Q1ECF5	1.1e-69	60.82	LIM domain-containing protein PLIM2b OS=Arabidopsis thaliana OX=3702 GN=PLIM2B P...	[more]
Q7F9R9	9.7e-69	67.23	LIM domain-containing protein PLIM2b OS=Oryza sativa subsp. japonica OX=39947 GN...	[more]

BLAST of PI0027896 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KQF5	2.9e-108	98.46	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G198170 PE=4 SV=1	[more]
A0A1S3CIM8	1.6e-106	96.92	LIM domain-containing protein WLIM2b-like OS=Cucumis melo OX=3656 GN=LOC10350141...	[more]
A0A6J1DT64	1.5e-104	95.88	LIM domain-containing protein WLIM2b-like OS=Momordica charantia OX=3673 GN=LOC1...	[more]
A0A6J1KBB9	3.3e-104	95.36	LIM domain-containing protein WLIM2a-like OS=Cucurbita maxima OX=3661 GN=LOC1114...	[more]
A0A6J1GYT7	4.3e-104	95.88	LIM domain-containing protein WLIM2b OS=Cucurbita moschata OX=3662 GN=LOC1114587...	[more]

BLAST of PI0027896 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004150238.1	6.0e-108	98.46	LIM domain-containing protein WLIM2b [Cucumis sativus] >XP_031741833.1 LIM domai...	[more]
XP_038891809.1	5.0e-107	97.95	LIM domain-containing protein WLIM2b-like [Benincasa hispida] >XP_038891810.1 LI...	[more]
XP_008463203.1	3.3e-106	96.92	PREDICTED: LIM domain-containing protein WLIM2b-like [Cucumis melo] >XP_00846320...	[more]
XP_023549082.1	1.8e-104	95.88	LIM domain-containing protein WLIM2b-like [Cucurbita pepo subsp. pepo] >XP_02354...	[more]
XP_022156896.1	3.1e-104	95.88	LIM domain-containing protein WLIM2b-like [Momordica charantia] >XP_022156897.1 ...	[more]

BLAST of PI0027896 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G55770.1	3.5e-90	81.18	GATA type zinc finger transcription factor family protein	[more]
AT3G55770.2	3.5e-90	81.18	GATA type zinc finger transcription factor family protein	[more]
AT3G55770.3	3.5e-90	81.18	GATA type zinc finger transcription factor family protein	[more]
AT3G55770.4	3.5e-90	81.18	GATA type zinc finger transcription factor family protein	[more]
AT3G55770.5	3.5e-90	81.18	GATA type zinc finger transcription factor family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001781	Zinc finger, LIM-type	SMART	SM00132	lim_4	coord: 9..61 e-value: 4.6E-13 score: 59.4 coord: 107..159 e-value: 4.7E-12 score: 56.0
IPR001781	Zinc finger, LIM-type	PFAM	PF00412	LIM	coord: 10..65 e-value: 8.7E-12 score: 45.1 coord: 108..163 e-value: 1.4E-10 score: 41.3
IPR001781	Zinc finger, LIM-type	PROSITE	PS00478	LIM_DOMAIN_1	coord: 10..44
IPR001781	Zinc finger, LIM-type	PROSITE	PS50023	LIM_DOMAIN_2	coord: 8..68 score: 13.4839
IPR001781	Zinc finger, LIM-type	PROSITE	PS50023	LIM_DOMAIN_2	coord: 106..166 score: 12.5434
None	No IPR available	GENE3D	2.10.110.10	Cysteine Rich Protein	coord: 102..172 e-value: 1.1E-19 score: 72.3 coord: 4..74 e-value: 9.2E-21 score: 75.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 77..98
None	No IPR available	PANTHER	PTHR24206:SF94	LIM DOMAIN-CONTAINING PROTEIN WLIM2B	coord: 1..186
None	No IPR available	PANTHER	PTHR24206	OS06G0237300 PROTEIN	coord: 1..186
None	No IPR available	CDD	cd09440	LIM1_SF3	coord: 6..68 e-value: 1.5436E-41 score: 132.589
None	No IPR available	SUPERFAMILY	57716	Glucocorticoid receptor-like (DNA-binding domain)	coord: 134..173
None	No IPR available	SUPERFAMILY	57716	Glucocorticoid receptor-like (DNA-binding domain)	coord: 3..35
None	No IPR available	SUPERFAMILY	57716	Glucocorticoid receptor-like (DNA-binding domain)	coord: 36..76
None	No IPR available	SUPERFAMILY	57716	Glucocorticoid receptor-like (DNA-binding domain)	coord: 100..133

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0027896.1	PI0027896.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0051017	actin filament bundle assembly
cellular_component	GO:0015629	actin cytoskeleton
cellular_component	GO:0005886	plasma membrane
molecular_function	GO:0051015	actin filament binding
molecular_function	GO:0046872	metal ion binding