PI0027889 (gene) Melon (PI 482460) v1

Overview
NamePI0027889
Typegene
OrganismCucumis metuliferus (Melon (PI 482460) v1)
DescriptionUnknown protein
Locationchr06: 26108951 .. 26109771 (+)
RNA-Seq ExpressionPI0027889
SyntenyPI0027889
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAAAGACAAGTTCAAAGGAAAAAGATGATGATGATGATGAAGCACAAGCAATTCCATTGGTAGAGGTAAATTTAAAGCATCTACCAAATTTTAAGTATGTGTGGAACAACGATGTTGGTAAGTTTTTGAAGTTTCCAAGGTTAAAAGATGTCATTGCTATAAATTGTCCTCAGCTTCAAACTCGTTTTCCAACTTCCTTAAACAAACATGTTCAACAACTCCAAAATTTAGTCATTCTTGGGATTCATCAAATGTTTTCTGAAGATGAAACATCAAAGTAAATGTTTCAAGAGGTAATGAATATTCTTTATCATTTTATATTTCTTGTTTTTTGACCTTTATTTTCAACAGTTTCTCTTTTTGTCAGATTTTATTCCCAAGCTTGTCAGGTTTGTCAGTGGACAGCAAGGCAATGACAAGAAATTTTTGGCTAACTCAATTTTCAAAACTAGGGTCATTTCCCACGATGATGTTTTATTTTATTATTGTTGTTTTGAAAACTTATTAGGAAAATAATGTTGTTTTGAAAGTAATTGGAAAAATAGGGTTGATTTCAGAAGGGCGAGTCTATTTGTAATTTTTTTTTAAAGAAGAAGAAGAAGAATTTTTAAAGAAGAAGAAGGGCGAGTCGACTCGCCTTATTAGCAGAAGGTGGCAGAGACCTGCTCGTCTAGGGAAGGAAGAAGGGCGAGTCGACTCGCCCTTTCATTCAATGTTCGTCTGCAACGACGCCTTCTTGTCGTTCATCTGCAACCCTGGCGCTCATCTGCAAAGGCTAGGCCTCGGGAACGTTGTTGCCGTTCATCTGCAACGTTGA

mRNA sequence

ATGGAAAAGACAAGTTCAAAGGAAAAAGATGATGATGATGATGAAGCACAAGCAATTCCATTGGTAGAGGTAAATTTAAAGCATCTACCAAATTTTAAGTATGTGTGGAACAACGATGTTGAAGAAGAAGAAGAATTTTTAAAGAAGAAGAAGGGCGAGTCGACTCGCCTTATTAGCAGAAGGTGGCAGAGACCTGCTCGTCTAGGGAAGGAAGAAGGGCGAGTCGACTCGCCCTTTCATTCAATGTTCGTCTGCAACGACGCCTTCTTGTCGTTCATCTGCAACCCTGGCGCTCATCTGCAAAGGCTAGGCCTCGGGAACGTTGTTGCCGTTCATCTGCAACGTTGA

Coding sequence (CDS)

ATGGAAAAGACAAGTTCAAAGGAAAAAGATGATGATGATGATGAAGCACAAGCAATTCCATTGGTAGAGGTAAATTTAAAGCATCTACCAAATTTTAAGTATGTGTGGAACAACGATGTTGAAGAAGAAGAAGAATTTTTAAAGAAGAAGAAGGGCGAGTCGACTCGCCTTATTAGCAGAAGGTGGCAGAGACCTGCTCGTCTAGGGAAGGAAGAAGGGCGAGTCGACTCGCCCTTTCATTCAATGTTCGTCTGCAACGACGCCTTCTTGTCGTTCATCTGCAACCCTGGCGCTCATCTGCAAAGGCTAGGCCTCGGGAACGTTGTTGCCGTTCATCTGCAACGTTGA

Protein sequence

MEKTSSKEKDDDDDEAQAIPLVEVNLKHLPNFKYVWNNDVEEEEEFLKKKKGESTRLISRRWQRPARLGKEEGRVDSPFHSMFVCNDAFLSFICNPGAHLQRLGLGNVVAVHLQR
Homology
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BLAST of PI0027889 vs. NCBI nr
Match: XP_038890209.1 (probable disease resistance protein At4g27220 [Benincasa hispida])

HSP 1 Score: 63.9 bits (154), Expect = 1.0e-06
Identity = 31/42 (73.81%), Postives = 35/42 (83.33%), Query Frame = 0 

Query: 1   MEKTSS--KEKDDDDDEAQAIPLVEVNLKHLPNFKYVWNNDV 41
           ME TS+  ++ DDDDD+AQ IPLVEVNLKHLPN KYVWN DV
Sbjct: 937 MENTSNFKQKDDDDDDDAQVIPLVEVNLKHLPNLKYVWNKDV 978

The following BLAST results are available for this feature:
BLAST of PI0027889 vs.
Match NameE-valueIdentityDescription
BLAST of PI0027889 vs.
Match NameE-valueIdentityDescription
BLAST of PI0027889 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038890209.11.0e-0673.81probable disease resistance protein At4g27220 [Benincasa hispida][more]
BLAST of PI0027889 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
PI0027889.1PI0027889.1mRNA