PI0027886 (gene) Melon (PI 482460) v1

Overview
NamePI0027886
Typegene
OrganismCucumis metuliferus (Melon (PI 482460) v1)
DescriptionUnknown protein
Locationchr01: 4137567 .. 4141017 (-)
RNA-Seq ExpressionPI0027886
SyntenyPI0027886
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCATCCACTTGGGAAGCAATGAGGAGGTATTTTATATTAGTTCACATATTTTTGTAGGTCATATATCAATATTCTGGGGGTATATACAATTAGCGTAATATTCTGAGGTATATACAATCAGTGTAATATTCTTGGGTATATACAATTAGTGTGTTGCATATACGGACACAAGTCTCAAAAAGAGACGTAGTGAGCACAACAAACACCAAGGATCCCAAGAATCCTGAGGGCAAACAAATGGTTGTAAAGTGGGTCAGAAGCAAACAACCAAATAAGCTGGCCGCCAAGTCAAAAAATAAGAGAAACTCCAAGGAGGAGCAATCTGATTCTAAAAGTAGTGATGTACATCACGGTATTTACATTTAATTACTTTGCATTTTGATTACTAACTCCAATTATTATTTTAGGCGAATACAAGTTTGACGAATGAAAGTTTCAATGAGGGGACTATTCAGGCACGAAGTCTAAAGATGATGCACGTCCAACAAAGGAACCAAAGAATTCCGAGGACTATTCAGGCACGAAGTCTTAAGACGATGCACATGCAACAAAGGAACCAAAATATTCCGAGGGGAAAAAGGTACCTAAGATCTTAGGTTTTATTTGTGACTGTTTCTTTATCAACCCTAAATGAAACATAAGAAAATGTTATGTTATAGACCAAAGGTAGGAATAAAATTTTGTTTCATTTGGTCCCGTTACTTGGTTATAAAAAATTGTGCCTGTACTTTTATTTGTCCAATACAAAAACTATTTGTCCAATTTTAGTTTTTGTATTTTGGTTTCTACCTTATTTTCTTAAGAAAAAAAAAAAGAGAAAAAAATCTACAAGCATGCCTTTATAGTAAACTTCCACAGTGTGTGTGTATATATATATTTTATTTTGTTTGGCACCCCCCTTCCCCCAATATATAAAAAAAAGACTAAATCCATACCCATATGCAATGCTTTCTTCTATAAACTCATTGTATCACAAAGAATTTTTAGTAGTTTGAGATTTTGAGCTTGCAGGTTCTCACGGAAAATACTCCCAACTTTCCTGCCGCTACTCAAAGAACCAGTGTCATTGCTTCTGGCCGTTCAATTGCTTCCTTCGCCCGCGGGGCTGCCACTGATGCACGCTTTTATGCTTCTGTTGCTCGTGATCGTGCTTCTGCTGCCCTCTGCACCGACAAGGCCAATGCTGCTCGTGCTGCTGCTGCTGTCGCTGCTGATGCTGCAGATGCTGTCGATACCGCGACCGATTGCATTGCCGCTGGCACTGCTGCTATTAGTCACACTGGAGCTGTCGATGATTTTGACGCTGCCAACACTTTATGTATCAACCACCCAGGCTATTTTGCTGCTCTAAGTACCGCTATTGAGGATGCCTTTGCTGCTCGCAATGAGGCTGATGCTGCCATGCGTGTCCTTACTGCCGCCAGCATGAGGACCCTAAAAAAGTGATAGAATGTCTCCAAACTATTTGTCTAAATTCTCTTTTGCTGCTCATACTGCCGTTTTCATTAACTTTAAAAATCCAACTTTTGATCGACTCCTCTTCCTCACCATTGCAGCATCTCCAATTTTGGTACATCGCTCTCTCATTATTGTTCCCCTGATTTCGCAGGTATTTATTTATATGAAGTCGTTTTGAACTCATGATTGTCCTTTATATTGAAGGCATTTCAAACTAGGGTTTCATGAGTAATTTGTTGTTTGTTTGTGCAATTTATTCTTTTTCTAGCTTTGAGTTGGGAAGTTGATGAACTGAGTTGAACTGATATTTTACTCTTTGATTTTTCGATGATTTTATCATTTTCTGTGTTACTTTTGATTTTGTTTGGAGCTGATAATTTTACTTTTGATTTTCCCACGAGCATTGTCAAGAATGAAGTATCATCTATAGGATCATATAAATCTAAATATACAACGTCCAGGGATGATGATTTGGAAAAGTTTCTCTTAAGATCAACTACAAGCAATCGGAACCTTGAAATATGAAACTGGGATAGAGGAGATCTCCAGAACCCATTTGTAAACTTCAACTAAACCTTCTCCATCATAAAAGAAAGAGCAATCCGAACAAAAAATCTCATGTTCAATCAAGAGTCAAAACATTCCTTGAGGGTAAATGAACGAAATAGAATTACTAGATAATGACTTTTATAATAACAAATAACCAACGCTTTTCATGAATTTGAAGTCATAAAAATTAAGAAACGAGGGAGACTTGAAAGCTAATACAGAGAAAGTGGATGAAGGGTTCCTAGTTTTCATGAGAAAATAATCTTCTCCCTTTCTAATGTCCTACACTTGGTATTCCTTCCACTCTTCTTTTTTCTTTCATCCGGAACTTTTGCATACAGTGAATTCGAGATACCCAATTAAAATTCCTAACAATTCCAATATGTTTGTATTTGCTGCTAGATTTTTTATTTTGTTTTGTTTCTTTATTTTCATTCTCTTTAGGAGTTTGTATCCCTTAAAGTTTAAATTTTTATTTCTTTTCGTTATATCTCTGAGAAGTTGTTTCTTGTTCAAAATTCACCCAACAGAGAGCAAATGGAAGGGCATTGAAGAAGTAGAAAAAGGGATTTTCTGTTAGGATACCACATAACTAGAATACTTAAAGAAACACAAAGAACAATATATACAGTGTACCACTATTAACCTAATTACTAATATACCCCTAATATTCATCTAATATCAACTCTATCATACTATATATGTTTGTAACTGATTTCTATTTGAAATGTTGTTTCAGTATCCCTTATTTTTAGGGATTGTTGTAGTTGTGGTTAAATTTTTTATTGATTTAGCGTGCTCCCACACTTATTGCTTTATTTAATTTATTTAATATATATAAATAACAATAATATCTTCCTTATGGTATTGGTTGGGTTTTGATTTAGTGATATTAGTTTAGTGTAACCTTTTTTTCTTCAGCGATGGGAAAAGAGAAGAGGGAGAATAAAAGAAGAGCAAGTGCAAGGTTGCAAGTAGCAAGGGCCCTTCCAATAAAGAAACCTGAAAAACAAACAATGGCCATCCATTTGGGAAGCAATGAGGAGGTATTCTATATTAGTTCACATATTTTTGTAGGTCATATATCAACATTGATATTCTCGGGTATATATAATTGATGTGTTGCCTATACAAGTCTCAAAAAGAGACGTACTGATCACAAGAAACACCAAGGATCCTGAAGGAAAACAAATGGTTAGAAAGTGGGTCAGGAGCAAACAACCAAATAAGCTGGCCGCCAAGTCAAAAAATAATGGAAACTCCAAGGAGGAGCAATCTGATTCTAAAAATAGTGATGTACATAACGGTATTTACATTATGTAAAATACTTCGCATTTTGATTACTAACTCCAATTATTATTTTAGGCGAATGCAAGTTTGAGGAATGAAAGTTTCGATGAACCAAAGAATTCTGAGGGGAAAAAGGTATGTAAGATCTGA

mRNA sequence

ATGGCCATCCACTTGGGAAGCAATGAGGAGGCGAATACAAGTTTGACGAATGAAAGTTTCAATGAGGGGACTATTCAGGCACGAAGTCTAAAGATGATGCACGTCCAACAAAGGAACCAAAGAATTCCGAGGACTATTCAGGCACGAAGTCTTAAGACGATGCACATGCAACAAAGGAACCAAAATATTCCGAGGGGAAAAAGGTTCTCACGGAAAATACTCCCAACTTTCCTGCCGCTACTCAAAGAACCAGTGTCATTGCTTCTGGCCGTTCAATTGCTTCCTTCGCCCGCGGGGCTGCCACTGATGCACGCTTTTATGCTTCTTCACACTGGAGCTGTCGATGATTTTGACGCTGCCAACACTTTATGTATCAACCACCCAGGCTATTTTGCTGCTCTAAGTACCGCTATTGAGGATGCCTTTGCTGCTCGCAATGAGGCTGATGCTGCCATGCGTGTCCTTACTGCCGCCAGCATGAGGACCCTAAAAAACATCTCCAATTTTGGTACATCGCTCTCTCATTATTGTTCCCCTGATTTCGCAGCGATGGGAAAAGAGAAGAGGGAGAATAAAAGAAGAGCAAGTGCAAGGTTGCAAGTAGCAAGGGCCCTTCCAATAAAGAAACCTGAAAAACAAACAATGGCCATCCATTTGGGAAGCAATGAGGAGGCGAATGCAAGTTTGAGGAATGAAAGTTTCGATGAACCAAAGAATTCTGAGGGGAAAAAGGTATGTAAGATCTGA

Coding sequence (CDS)

ATGGCCATCCACTTGGGAAGCAATGAGGAGGCGAATACAAGTTTGACGAATGAAAGTTTCAATGAGGGGACTATTCAGGCACGAAGTCTAAAGATGATGCACGTCCAACAAAGGAACCAAAGAATTCCGAGGACTATTCAGGCACGAAGTCTTAAGACGATGCACATGCAACAAAGGAACCAAAATATTCCGAGGGGAAAAAGGTTCTCACGGAAAATACTCCCAACTTTCCTGCCGCTACTCAAAGAACCAGTGTCATTGCTTCTGGCCGTTCAATTGCTTCCTTCGCCCGCGGGGCTGCCACTGATGCACGCTTTTATGCTTCTTCACACTGGAGCTGTCGATGATTTTGACGCTGCCAACACTTTATGTATCAACCACCCAGGCTATTTTGCTGCTCTAAGTACCGCTATTGAGGATGCCTTTGCTGCTCGCAATGAGGCTGATGCTGCCATGCGTGTCCTTACTGCCGCCAGCATGAGGACCCTAAAAAACATCTCCAATTTTGGTACATCGCTCTCTCATTATTGTTCCCCTGATTTCGCAGCGATGGGAAAAGAGAAGAGGGAGAATAAAAGAAGAGCAAGTGCAAGGTTGCAAGTAGCAAGGGCCCTTCCAATAAAGAAACCTGAAAAACAAACAATGGCCATCCATTTGGGAAGCAATGAGGAGGCGAATGCAAGTTTGAGGAATGAAAGTTTCGATGAACCAAAGAATTCTGAGGGGAAAAAGGTATGTAAGATCTGA

Protein sequence

MAIHLGSNEEANTSLTNESFNEGTIQARSLKMMHVQQRNQRIPRTIQARSLKTMHMQQRNQNIPRGKRFSRKILPTFLPLLKEPVSLLLAVQLLPSPAGLPLMHAFMLLHTGAVDDFDAANTLCINHPGYFAALSTAIEDAFAARNEADAAMRVLTAASMRTLKNISNFGTSLSHYCSPDFAAMGKEKRENKRRASARLQVARALPIKKPEKQTMAIHLGSNEEANASLRNESFDEPKNSEGKKVCKI
Homology
[Close]
BLAST of PI0027886 vs. NCBI nr
Match: XP_031744842.1 (uncharacterized protein LOC105436127 isoform X1 [Cucumis sativus])

HSP 1 Score: 85.9 bits (211), Expect = 5.4e-13
Identity = 51/79 (64.56%), Postives = 55/79 (69.62%), Query Frame = 0 

Query: 184 MGKEKRENKRRASARLQVARALPIKKPEKQTMAIHLGSNEEANASLRNESFD-------- 243
           MGKEKRENKRR SAR+QVARA PIKK EKQTMAIH  SNE+ANAS  NESF+        
Sbjct: 1   MGKEKRENKRRTSARVQVARAPPIKKSEKQTMAIHFRSNEQANASFTNESFNEGDYSGTK 60

Query: 244 ---------EPKNSEGKKV 246
                    EPKNS+GKKV
Sbjct: 61  SKDDARPTKEPKNSKGKKV 79

[Close]
BLAST of PI0027886 vs. NCBI nr
Match: XP_031744844.1 (uncharacterized protein LOC116405174 [Cucumis sativus])

HSP 1 Score: 62.4 bits (150), Expect = 6.4e-06
Identity = 53/143 (37.06%), Postives = 66/143 (46.15%), Query Frame = 0 

Query: 110 HTGAVDDFDAANTLCINHPGYFAALSTAIEDAFA-------ARNEADAAMRVLTAASMRT 169
           HT AVDD++AANTL +NHP Y+AAL TAI+DA A       A  EADAA   L     RT
Sbjct: 143 HTKAVDDYEAANTLYMNHPDYYAALMTAIKDAGAASGAARSAAEEADAAKYALMDTGKRT 202

Query: 170 LKNISNFGTSLSHYCSPDFAAMGKEKRENKRRASARLQVARALPIKKPEKQTMAIHLGSN 229
           L                      K   E K  ++       A P K+P+         S 
Sbjct: 203 L----------------------KRNMEAKEISTGTKSKDDARPTKEPKNSEDYSGTKSK 257

Query: 230 EEANASLRNESFDEPKNSEGKKV 246
           ++A+ +       EPKNSEGKKV
Sbjct: 263 DDAHPT------KEPKNSEGKKV 257

[Close]
BLAST of PI0027886 vs. NCBI nr
Match: KAE8646115.1 (hypothetical protein Csa_016498 [Cucumis sativus])

HSP 1 Score: 62.4 bits (150), Expect = 6.4e-06
Identity = 53/143 (37.06%), Postives = 66/143 (46.15%), Query Frame = 0 

Query: 110 HTGAVDDFDAANTLCINHPGYFAALSTAIEDAFA-------ARNEADAAMRVLTAASMRT 169
           HT AVDD++AANTL +NHP Y+AAL TAI+DA A       A  EADAA   L     RT
Sbjct: 337 HTKAVDDYEAANTLYMNHPDYYAALMTAIKDAGAASGAARSAAEEADAAKYALMDTGKRT 396

Query: 170 LKNISNFGTSLSHYCSPDFAAMGKEKRENKRRASARLQVARALPIKKPEKQTMAIHLGSN 229
           L                      K   E K  ++       A P K+P+         S 
Sbjct: 397 L----------------------KRNMEAKEISTGTKSKDDARPTKEPKNSEDYSGTKSK 451

Query: 230 EEANASLRNESFDEPKNSEGKKV 246
           ++A+ +       EPKNSEGKKV
Sbjct: 457 DDAHPT------KEPKNSEGKKV 451

[Close]
BLAST of PI0027886 vs. NCBI nr
Match: KAE8646119.1 (hypothetical protein Csa_016700 [Cucumis sativus])

HSP 1 Score: 60.5 bits (145), Expect = 2.4e-05
Identity = 62/204 (30.39%), Postives = 87/204 (42.65%), Query Frame = 0 

Query: 1   MAIHLGSNEEANTSLTNESFNEGTIQARSLKMMHVQQRNQRIPRTIQARSLKTMHM---- 60
           MAIH  SNE+AN S TNESFNEG       K      R  + P+  + + + T +     
Sbjct: 1   MAIHFRSNEQANASFTNESFNEGDYSGTKSK---DDARPTKEPKNSKGKKVITENTPNFP 60

Query: 61  --------QQRNQNIPRGKRFSRKILPTFLPLLKEPVSLLLAVQLLPSPAGLPLMHAFM- 120
                      N ++ RG   + K+  +   + ++  S  L +    +        A + 
Sbjct: 61  ATCRIVDDASSNTSLARG---AAKVARSCASVARDRASTALCIDKANAARAAADAAAVVA 120

Query: 121 --------------------LLHTGAVDDFDAANTLCINHPGYFAALSTAIEDAFAARNE 165
                               + HT AVDD++AANTL INHP Y+AAL TA E+A AA   
Sbjct: 121 DDAADAVDPATNCIAAGIAAISHTKAVDDYEAANTLYINHPEYYAALVTASEEACAASRA 180

[Close]
BLAST of PI0027886 vs. NCBI nr
Match: KAE8646117.1 (hypothetical protein Csa_015902 [Cucumis sativus])

HSP 1 Score: 60.1 bits (144), Expect = 3.2e-05
Identity = 35/62 (56.45%), Postives = 40/62 (64.52%), Query Frame = 0 

Query: 110 HTGAVDDFDAANTLCINHPGYFAALSTAIEDAFA-------ARNEADAAMRVLTAASMRT 165
           HT AVDD++AANTL +NHP Y+AAL TAI+DA A       A  EADAA   L     RT
Sbjct: 122 HTKAVDDYEAANTLYMNHPDYYAALMTAIKDAGAASGAARSAAEEADAAKYALIDTGKRT 181

The following BLAST results are available for this feature:
BLAST of PI0027886 vs.
Match NameE-valueIdentityDescription
BLAST of PI0027886 vs.
Match NameE-valueIdentityDescription
BLAST of PI0027886 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_031744842.15.4e-1364.56uncharacterized protein LOC105436127 isoform X1 [Cucumis sativus][more]
XP_031744844.16.4e-0637.06uncharacterized protein LOC116405174 [Cucumis sativus][more]
KAE8646115.16.4e-0637.06hypothetical protein Csa_016498 [Cucumis sativus][more]
KAE8646119.12.4e-0530.39hypothetical protein Csa_016700 [Cucumis sativus][more]
KAE8646117.13.2e-0556.45hypothetical protein Csa_015902 [Cucumis sativus][more]
BLAST of PI0027886 vs. NCBI nr
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 227..248
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..20
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 229..248

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
PI0027886.1PI0027886.1mRNA