PI0027854 (gene) Melon (PI 482460) v1

Overview


Name	PI0027854
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Unknown protein
Location	chr02: 11451666 .. 11452184 (-)
RNA-Seq Expression	PI0027854
Synteny	PI0027854

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCTACCCAAAATGATCAATCTTTGGCGTCGAGTGAAGGCGAAGACATCTTTGAAATCCTTGGCAACACCGTTTGCAAGCCAACGTTTGACTACTTTGAACAAGTCTTGGCGCAGCAAACGGATCACACGGTACAAATCGTAGAAATGAAACTCTTACTTGAAAAGTTGCACCGCACAATGATCGAACCCCAGCTGGCGCAAGCCTCCTTAGAAGAGAAATTTGTCCAACAGCAAGAGAAGTTGGATCTTGTGGAGTGTGAACTAGGTATTCTTTTGGCGAACCACAATCGGATGTCTTCTGCGGTGTCTAACCTCACTTCACTAGTCATAGCACAATCTGAAATGATGCAGCAGATGTCCGCATGGCATGATGGGCAGTTCAGAGCCCTAATGGAATACACCCAGGTAGTTTTTGTTCAACACGTGCCAACATCAATCATTCTGCCTGACCTTGAAGCACTCTTACCTACACCACAAGAACGTCTTGACGATCCTGAATCTCTCCAAGAAAATTAA

mRNA sequence

ATGCCTACCCAAAATGATCAATCTTTGGCGTCGAGTGAAGGCGAAGACATCTTTGAAATCCTTGGCAACACCGTTTGCAAGCCAACGTTTGACTACTTTGAACAAGTCTTGGCGCAGCAAACGGATCACACGGTACAAATCGTAGAAATGAAACTCTTACTTGAAAAGTTGCACCGCACAATGATCGAACCCCAGCTGGCGCAAGCCTCCTTAGAAGAGAAATTTGTCCAACAGCAAGAGAAGTTGGATCTTGTGGAGTGTGAACTAGGTATTCTTTTGGCGAACCACAATCGGATGTCTTCTGCGGTGTCTAACCTCACTTCACTAGTCATAGCACAATCTGAAATGATGCAGCAGATGTCCGCATGGCATGATGGGCAGTTCAGAGCCCTAATGGAATACACCCAGGTAGTTTTTGTTCAACACGTGCCAACATCAATCATTCTGCCTGACCTTGAAGCACTCTTACCTACACCACAAGAACGTCTTGACGATCCTGAATCTCTCCAAGAAAATTAA

Coding sequence (CDS)

ATGCCTACCCAAAATGATCAATCTTTGGCGTCGAGTGAAGGCGAAGACATCTTTGAAATCCTTGGCAACACCGTTTGCAAGCCAACGTTTGACTACTTTGAACAAGTCTTGGCGCAGCAAACGGATCACACGGTACAAATCGTAGAAATGAAACTCTTACTTGAAAAGTTGCACCGCACAATGATCGAACCCCAGCTGGCGCAAGCCTCCTTAGAAGAGAAATTTGTCCAACAGCAAGAGAAGTTGGATCTTGTGGAGTGTGAACTAGGTATTCTTTTGGCGAACCACAATCGGATGTCTTCTGCGGTGTCTAACCTCACTTCACTAGTCATAGCACAATCTGAAATGATGCAGCAGATGTCCGCATGGCATGATGGGCAGTTCAGAGCCCTAATGGAATACACCCAGGTAGTTTTTGTTCAACACGTGCCAACATCAATCATTCTGCCTGACCTTGAAGCACTCTTACCTACACCACAAGAACGTCTTGACGATCCTGAATCTCTCCAAGAAAATTAA

Protein sequence

MPTQNDQSLASSEGEDIFEILGNTVCKPTFDYFEQVLAQQTDHTVQIVEMKLLLEKLHRTMIEPQLAQASLEEKFVQQQEKLDLVECELGILLANHNRMSSAVSNLTSLVIAQSEMMQQMSAWHDGQFRALMEYTQVVFVQHVPTSIILPDLEALLPTPQERLDDPESLQEN

Homology

[Close]

BLAST of PI0027854 vs. ExPASy TrEMBL
Match: A0A5D3DYE2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2030G00280 PE=4 SV=1)

HSP 1 Score: 103.2 bits (256), Expect = 1.1e-18
Identity = 64/167 (38.32%), Postives = 101/167 (60.48%), Query Frame = 0


Query: 7   QSLASSEGEDIFEILGNTVCKPTFDYFEQVLAQQTDHTVQIVEMKLLLEKLHRTMIEPQL 66
           +S   SEG+DI++ +G+TV K TFDYFEQVL +QT ++++   M  L+EK+       Q+
Sbjct: 179 ESFRESEGKDIYDFIGSTVAKRTFDYFEQVLYEQTINSMKHDAMTTLMEKV-------QV 238

Query: 67  AQASLEEKFVQQQEKLDLVECELGILLANHNRMSSAVSNLTSLVIAQSEMMQQMSAWHDG 126
             + L++   +QQ+       ++  ++AN +++SS VSNLT +VI   EM  +M    D 
Sbjct: 239 ENSKLKQLLTEQQK-------QVAKIMANQDQLSSTVSNLTCVVIMNFEMTWKMGVQRDK 298

Query: 127 QFRALMEYTQVVFVQHVPTSIILPDLEALLPTPQE-RLDDPESLQEN 173
           QF+A +EYT  VF Q +P+  I P++E+L P  Q   L  P+  Q+N
Sbjct: 299 QFKASIEYTHAVFAQRMPSPFISPEIESLYPLIQPVNLGYPDPHQDN 331

[Close]

BLAST of PI0027854 vs. ExPASy TrEMBL
Match: A0A5A7VF20 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold548G00430 PE=4 SV=1)

HSP 1 Score: 103.2 bits (256), Expect = 1.1e-18
Identity = 64/167 (38.32%), Postives = 101/167 (60.48%), Query Frame = 0


Query: 7   QSLASSEGEDIFEILGNTVCKPTFDYFEQVLAQQTDHTVQIVEMKLLLEKLHRTMIEPQL 66
           +S   SEG+DI++ +G+TV K TFDYFEQVL +QT ++++   M  L+EK+       Q+
Sbjct: 259 ESFRESEGKDIYDFIGSTVAKRTFDYFEQVLYEQTINSMKHDAMTTLMEKV-------QV 318

Query: 67  AQASLEEKFVQQQEKLDLVECELGILLANHNRMSSAVSNLTSLVIAQSEMMQQMSAWHDG 126
             + L++   +QQ+       ++  ++AN +++SS VSNLT +VI   EM  +M    D 
Sbjct: 319 ENSKLKQLLTEQQK-------QVAKIMANQDQLSSTVSNLTCVVIMNFEMTWKMGVQRDK 378

Query: 127 QFRALMEYTQVVFVQHVPTSIILPDLEALLPTPQE-RLDDPESLQEN 173
           QF+A +EYT  VF Q +P+  I P++E+L P  Q   L  P+  Q+N
Sbjct: 379 QFKASIEYTHAVFAQRMPSPFISPEIESLYPLIQPVNLGYPDPHQDN 411

[Close]

BLAST of PI0027854 vs. ExPASy TrEMBL
Match: A0A5A7UFG4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold102G00220 PE=4 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 9.0e-05
Identity = 23/51 (45.10%), Postives = 38/51 (74.51%), Query Frame = 0


Query: 7   QSLASSEGEDIFEILGNTVCKPTFDYFEQVLAQQTDHTVQIVEMKLLLEKL 58
           +S   SEG+++++++G T+CKPTFDYFEQVL QQT ++     M  +++K+
Sbjct: 387 ESFVKSEGDNLYDLIGTTICKPTFDYFEQVLDQQTVYSADHDTMTTMIDKV 437

[Close]

BLAST of PI0027854 vs. ExPASy TrEMBL
Match: A0A5D3CVE4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold637G00610 PE=4 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 7.6e-04
Identity = 48/155 (30.97%), Postives = 65/155 (41.94%), Query Frame = 0


Query: 15  EDIFEILGNTVCKPTFDYFEQVLAQQTDHTVQIVEMKLLLEKLHRTMIEPQLAQASLEEK 74
           +DI++ +  TVCK TF+Y E+VL  Q     Q+   + ++E+L  T  E       L+  
Sbjct: 159 DDIYDFIRTTVCKLTFNYLEEVLVVQKFKGKQLETTRKIVEELQATNTE-------LKAT 218

Query: 75  FVQQQEKLDLVECELGILLANHNRMSSAVSNLTSLVIAQSEMMQQMSAWHDGQFRALMEY 134
            VQQ +  D   C                                     D QFRALMEY
Sbjct: 219 IVQQNDATDEDMC-------------------------------------DRQFRALMEY 269

Query: 135 TQVVFVQHVPTSIILPDLEA-LLPTPQERLDDPES 169
           T  VFVQ +P  I  P+LEA  LP     L + +S
Sbjct: 279 TNAVFVQGIPALINSPNLEASCLPLQPPNLGNSDS 269

[Close]

BLAST of PI0027854 vs. NCBI nr
Match: KAA0064129.1 (uncharacterized protein E6C27_scaffold548G00430 [Cucumis melo var. makuwa])

HSP 1 Score: 103.2 bits (256), Expect = 2.3e-18
Identity = 64/167 (38.32%), Postives = 101/167 (60.48%), Query Frame = 0


Query: 7   QSLASSEGEDIFEILGNTVCKPTFDYFEQVLAQQTDHTVQIVEMKLLLEKLHRTMIEPQL 66
           +S   SEG+DI++ +G+TV K TFDYFEQVL +QT ++++   M  L+EK+       Q+
Sbjct: 259 ESFRESEGKDIYDFIGSTVAKRTFDYFEQVLYEQTINSMKHDAMTTLMEKV-------QV 318

Query: 67  AQASLEEKFVQQQEKLDLVECELGILLANHNRMSSAVSNLTSLVIAQSEMMQQMSAWHDG 126
             + L++   +QQ+       ++  ++AN +++SS VSNLT +VI   EM  +M    D 
Sbjct: 319 ENSKLKQLLTEQQK-------QVAKIMANQDQLSSTVSNLTCVVIMNFEMTWKMGVQRDK 378

Query: 127 QFRALMEYTQVVFVQHVPTSIILPDLEALLPTPQE-RLDDPESLQEN 173
           QF+A +EYT  VF Q +P+  I P++E+L P  Q   L  P+  Q+N
Sbjct: 379 QFKASIEYTHAVFAQRMPSPFISPEIESLYPLIQPVNLGYPDPHQDN 411

[Close]

BLAST of PI0027854 vs. NCBI nr
Match: TYK28611.1 (hypothetical protein E5676_scaffold2030G00280 [Cucumis melo var. makuwa])

HSP 1 Score: 103.2 bits (256), Expect = 2.3e-18
Identity = 64/167 (38.32%), Postives = 101/167 (60.48%), Query Frame = 0


Query: 7   QSLASSEGEDIFEILGNTVCKPTFDYFEQVLAQQTDHTVQIVEMKLLLEKLHRTMIEPQL 66
           +S   SEG+DI++ +G+TV K TFDYFEQVL +QT ++++   M  L+EK+       Q+
Sbjct: 179 ESFRESEGKDIYDFIGSTVAKRTFDYFEQVLYEQTINSMKHDAMTTLMEKV-------QV 238

Query: 67  AQASLEEKFVQQQEKLDLVECELGILLANHNRMSSAVSNLTSLVIAQSEMMQQMSAWHDG 126
             + L++   +QQ+       ++  ++AN +++SS VSNLT +VI   EM  +M    D 
Sbjct: 239 ENSKLKQLLTEQQK-------QVAKIMANQDQLSSTVSNLTCVVIMNFEMTWKMGVQRDK 298

Query: 127 QFRALMEYTQVVFVQHVPTSIILPDLEALLPTPQE-RLDDPESLQEN 173
           QF+A +EYT  VF Q +P+  I P++E+L P  Q   L  P+  Q+N
Sbjct: 299 QFKASIEYTHAVFAQRMPSPFISPEIESLYPLIQPVNLGYPDPHQDN 331

[Close]

BLAST of PI0027854 vs. NCBI nr
Match: KAA0053237.1 (hypothetical protein E6C27_scaffold102G00220 [Cucumis melo var. makuwa])

HSP 1 Score: 57.0 bits (136), Expect = 1.9e-04
Identity = 23/51 (45.10%), Postives = 38/51 (74.51%), Query Frame = 0


Query: 7   QSLASSEGEDIFEILGNTVCKPTFDYFEQVLAQQTDHTVQIVEMKLLLEKL 58
           +S   SEG+++++++G T+CKPTFDYFEQVL QQT ++     M  +++K+
Sbjct: 387 ESFVKSEGDNLYDLIGTTICKPTFDYFEQVLDQQTVYSADHDTMTTMIDKV 437

The following BLAST results are available for this feature:

BLAST of PI0027854 vs.


Match Name	E-value	Identity	Description

BLAST of PI0027854 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3DYE2	1.1e-18	38.32	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7VF20	1.1e-18	38.32	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5A7UFG4	9.0e-05	45.10	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5D3CVE4	7.6e-04	30.97	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]

BLAST of PI0027854 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0064129.1	2.3e-18	38.32	uncharacterized protein E6C27_scaffold548G00430 [Cucumis melo var. makuwa]	[more]
TYK28611.1	2.3e-18	38.32	hypothetical protein E5676_scaffold2030G00280 [Cucumis melo var. makuwa]	[more]
KAA0053237.1	1.9e-04	45.10	hypothetical protein E6C27_scaffold102G00220 [Cucumis melo var. makuwa]	[more]

BLAST of PI0027854 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 68..88

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0027854.1	PI0027854.1	mRNA