PI0027645 (gene) Melon (PI 482460) v1

Overview
NamePI0027645
Typegene
OrganismCucumis metuliferus (Melon (PI 482460) v1)
DescriptionUnknown protein
Locationchr02: 188479 .. 189583 (+)
RNA-Seq ExpressionPI0027645
SyntenyPI0027645
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CTTCCTTACGAGTTAAAAATTGAGAGAAAATTTCTATAGTACTACCTCAACTTGTTACATGTGAGAAGAATAGATAGAGTGTGTTGGTTGTGGTTTTTGAAAAAGGCAAATAAAGTTATGGATGTGTATATATATATAGAGAGAGAGTAACCCCACCATCATCACTACCCATTACTTCATTCCAATAAACTCTCTCTCTTCCTCTCTGTTCGTTTGTTTTGTGTAAATCAGAAGAAGAAGAAGAAAGAAAAAGAAAAATGGCAGACGAAGGAACAACAAATTGCATCGATATCCTCCTCGCTATTCTCCTCCCTCCTCTTGGTGTCTTTCTCAAATATGGATGCCAAGTCTGATAATCATCTCTTCTTCTTCTCTTAATATTATTTTTCATTTTCAAATTTCATTATTTCACTAACTCTCTCTTTTAATTACTTCATAATTTCAGGTTGAGTTTGGATTTGCTTGGTCCTAACTTTCTTTGGTTACATCCCTGGCATTATTTATGCTGTTTATGCCATCACCAAGTGATCGAATTCAAAGTCTGTTTTATAATTCCCTCATCCTTTTCTTTTGCTAAGTAACTACTTTTTATTTTTAATTAAATTTCAATTATGTGTGTTTGATTTCACTTTTCAGGGATTGATGGAAGAAATTATTGGGACTCATCATCATGATCTCTCCTCACCGACACTCTCCCTTCCTTTTTCTATTTTCTTTTTTCCTAATTTCTCTTGATCTTTGTTTTGTGTGTTTGCTTGTGTGATAATCATCCCATCCATCAAAGACATCTACACAGTTGCTGCTTCTAATTTTTTTTTTTTTTTTTTTTTTGGTAATTTGTAATTTGTAATTGTAATTTGTAATTTCGAATTATTTGGGGGTAATTTAATTATGTGTTGTTCTTGTTGTATTGATTGAATTGGTTGCTGTAAAGAAAAAAAACAAAAAAAAGGATAAGGACAAAGTAAGTTTGTTGAAGAATTGGAATGTGTTGAGTGTGGATTACGTTTCTTTCTTTCTTTCTTTCTTTCTTTCATTCTCAAAAGGTTCCCTTTCCCTATTATATTAAAAGTTTATGCTCAACTTATCCACCCTTTTTCATATA

mRNA sequence

CTTCCTTACGAGTTAAAAATTGAGAGAAAATTTCTATAGTACTACCTCAACTTGTTACATGTGAGAAGAATAGATAGAGTGTGTTGGTTGTGGTTTTTGAAAAAGGCAAATAAAGTTATGGATGTGTATATATATATAGAGAGAGAGTAACCCCACCATCATCACTACCCATTACTTCATTCCAATAAACTCTCTCTCTTCCTCTCTGTTCGTTTGTTTTGTGTAAATCAGAAGAAGAAGAAGAAAGAAAAAGAAAAATGGCAGACGAAGGAACAACAAATTGCATCGATATCCTCCTCGCTATTCTCCTCCCTCCTCTTGGTGTCTTTCTCAAATATGGATGCCAAGTTGAGTTTGGATTTGCTTGGTCCTAACTTTCTTTGGTTACATCCCTGGCATTATTTATGCTGTTTATGCCATCACCAAGTGATCGAATTCAAAGGATTGATGGAAGAAATTATTGGGACTCATCATCATGATCTCTCCTCACCGACACTCTCCCTTCCTTTTTCTATTTTCTTTTTTCCTAATTTCTCTTGATCTTTGTTTTGTGTGTTTGCTTGTGTGATAATCATCCCATCCATCAAAGACATCTACACAGTTGCTGCTTCTAATTTTTTTTTTTTTTTTTTTTTTGGTAATTTGTAATTTGTAATTGTAATTTGTAATTTCGAATTATTTGGGGGTAATTTAATTATGTGTTGTTCTTGTTGTATTGATTGAATTGGTTGCTGTAAAGAAAAAAAACAAAAAAAAGGATAAGGACAAAGTAAGTTTGTTGAAGAATTGGAATGTGTTGAGTGTGGATTACGTTTCTTTCTTTCTTTCTTTCTTTCTTTCATTCTCAAAAGGTTCCCTTTCCCTATTATATTAAAAGTTTATGCTCAACTTATCCACCCTTTTTCATATA

Coding sequence (CDS)

ATGGATGCCAAGTTGAGTTTGGATTTGCTTGGTCCTAACTTTCTTTGGTTACATCCCTGGCATTATTTATGCTGTTTATGCCATCACCAAGTGATCGAATTCAAAGGATTGATGGAAGAAATTATTGGGACTCATCATCATGATCTCTCCTCACCGACACTCTCCCTTCCTTTTTCTATTTTCTTTTTTCCTAATTTCTCTTGA

Protein sequence

MDAKLSLDLLGPNFLWLHPWHYLCCLCHHQVIEFKGLMEEIIGTHHHDLSSPTLSLPFSIFFFPNFS
Homology
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BLAST of PI0027645 vs. ExPASy TrEMBL
Match: A0A5J5BR14 (Uncharacterized protein OS=Nyssa sinensis OX=561372 GN=F0562_020102 PE=4 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 6.6e-04
Identity = 18/26 (69.23%), Postives = 23/26 (88.46%), Query Frame = 0 

Query: 7  LDLLGPNFLWLHPWHYLCCLCHHQVI 33
          LDL G + +WLHPW++LCCLCHHQV+
Sbjct: 40 LDLSGADLVWLHPWYHLCCLCHHQVV 65

The following BLAST results are available for this feature:
BLAST of PI0027645 vs.
Match NameE-valueIdentityDescription
BLAST of PI0027645 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5J5BR146.6e-0469.23Uncharacterized protein OS=Nyssa sinensis OX=561372 GN=F0562_020102 PE=4 SV=1[more]
BLAST of PI0027645 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
BLAST of PI0027645 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
PI0027645.1PI0027645.1mRNA