PI0027597 (gene) Melon (PI 482460) v1

Overview


Name	PI0027597
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Polyprotein
Location	chr06: 16613408 .. 16614014 (+)
RNA-Seq Expression	PI0027597
Synteny	PI0027597

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAAGAATGGTTCTTAGAGAACGGTTATCTTCAAGACCTCGATCAGAGAAAGAATGCAGAGTTCTTAAATGATAAATCCAAACTACTTGCAGCACTGGCACAGGCAACAACGGATGCCGACTTTCAAAGATTATTATCAACTGCAGTAAATGCTTCTTCGAGTTCAAAATTAGCATCCTCTTCCATACAGGAAGATGAAGAATTGGCAAGTCCGGAGTACGATTTGAACAACCCGCTTCTCGACTCACAACCTATGTGAGCTCCGAATCCAAATACCCGTTTCAAAAAAGAAATAGGATCCAAATAAGAGTCTTCAAAAGAAAAATATCTATTTAAATTTATTATTGTTATTATTATTAAAAAAAAATTGTATAATCTCATCTCTAGTGTAATTAATGAGTAAACTTTGTACATTTTCTAGTTTACTCAGTAAGTATTGTTTCGTCATCCAAAAATCCAGGCGAAAATTGAAGACAACGAAGCCTAAAGAAATTGTGTATTTCATGGAGTGTTCGACTACGTTTGATGGTCCCGACAGTAAGTCACAGATTAGGCGTGGTGAGCCCGTTGGTCAGTCTATAATCCGCCGTAGGGAATACGATTAA

mRNA sequence

ATGAAAGAATGGTTCTTAGAGAACGGTTATCTTCAAGACCTCGATCAGAGAAAGAATGCAGAGTTCTTAAATGATAAATCCAAACTACTTGCAGCACTGGCACAGGCAACAACGGATGCCGACTTTCAAAGATTATTATCAACTGCAGTAAATGCTTCTTCGAGTTCAAAATTAGCATCCTCTTCCATACAGGAAGATGAAGAATTGGCAAGTCCGGAGTACGATTTGAACAACCCGCTTCTCGACTCACAACCTATTAAGTATTGTTTCGTCATCCAAAAATCCAGGCGAAAATTGAAGACAACGAAGCCTAAAGAAATTGTGTATTTCATGGAGTGTTCGACTACGTTTGATGGTCCCGACAGTAAGTCACAGATTAGGCGTGGTGAGCCCGTTGGTCAGTCTATAATCCGCCGTAGGGAATACGATTAA

Coding sequence (CDS)

ATGAAAGAATGGTTCTTAGAGAACGGTTATCTTCAAGACCTCGATCAGAGAAAGAATGCAGAGTTCTTAAATGATAAATCCAAACTACTTGCAGCACTGGCACAGGCAACAACGGATGCCGACTTTCAAAGATTATTATCAACTGCAGTAAATGCTTCTTCGAGTTCAAAATTAGCATCCTCTTCCATACAGGAAGATGAAGAATTGGCAAGTCCGGAGTACGATTTGAACAACCCGCTTCTCGACTCACAACCTATTAAGTATTGTTTCGTCATCCAAAAATCCAGGCGAAAATTGAAGACAACGAAGCCTAAAGAAATTGTGTATTTCATGGAGTGTTCGACTACGTTTGATGGTCCCGACAGTAAGTCACAGATTAGGCGTGGTGAGCCCGTTGGTCAGTCTATAATCCGCCGTAGGGAATACGATTAA

Protein sequence

MKEWFLENGYLQDLDQRKNAEFLNDKSKLLAALAQATTDADFQRLLSTAVNASSSSKLASSSIQEDEELASPEYDLNNPLLDSQPIKYCFVIQKSRRKLKTTKPKEIVYFMECSTTFDGPDSKSQIRRGEPVGQSIIRRREYD

Homology

[Close]

BLAST of PI0027597 vs. ExPASy TrEMBL
Match: A0A5A7SNT5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold34G001890 PE=4 SV=1)

HSP 1 Score: 128.6 bits (322), Expect = 2.0e-26
Identity = 65/86 (75.58%), Postives = 74/86 (86.05%), Query Frame = 0


Query: 1   MKEWFLENGYLQDLDQRKNAEFLNDKSKLLAALAQATTDADFQRLLSTAVNASSSSKLAS 60
           +KEWF+ENGYLQD+DQ KN +FLN+KSKLLA LAQATTDADFQRLL T VNAS+SSK  S
Sbjct: 59  IKEWFVENGYLQDIDQGKNVKFLNEKSKLLATLAQATTDADFQRLLPTTVNASTSSKSTS 118

Query: 61  SSIQEDEELASPEYDLNNPLLDSQPI 87
           S +QEDEE   PEYDL+NP LDSQP+
Sbjct: 119 SFLQEDEEQVDPEYDLDNPFLDSQPM 144

[Close]

BLAST of PI0027597 vs. ExPASy TrEMBL
Match: A0A5A7SWC0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold213G00570 PE=4 SV=1)

HSP 1 Score: 127.5 bits (319), Expect = 4.5e-26
Identity = 70/86 (81.40%), Postives = 75/86 (87.21%), Query Frame = 0


Query: 1   MKEWFLENGYLQDLDQRKNAEFLNDKSKLLAALAQATTDADFQRLLSTAVNASSSSKLAS 60
           +KEWF EN YLQD+DQRKN EFLNDKSKLL ALAQATTDADFQRLLSTAVNASSSSK  S
Sbjct: 24  IKEWFAENKYLQDIDQRKNVEFLNDKSKLLVALAQATTDADFQRLLSTAVNASSSSKSPS 83

Query: 61  SSIQEDEELASPEYDLNNPLLDSQPI 87
           SSIQEDEE   PEYDL++  LDSQP+
Sbjct: 84  SSIQEDEEQIDPEYDLDD--LDSQPM 107

[Close]

BLAST of PI0027597 vs. ExPASy TrEMBL
Match: A0A5D3BI61 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold232G00950 PE=4 SV=1)

HSP 1 Score: 108.6 bits (270), Expect = 2.2e-20
Identity = 60/81 (74.07%), Postives = 66/81 (81.48%), Query Frame = 0


Query: 5   FLENGYLQDLDQRKNAEFLNDKSKLLAALAQATTDADFQRLLSTAVNASSSSKLASSSIQ 64
           + +NG LQD+DQRKNA+FLNDK K LAAL QAT DADFQRLLSTAVN SSSSK A S IQ
Sbjct: 139 YQKNGDLQDIDQRKNAKFLNDKLKFLAALVQATIDADFQRLLSTAVNTSSSSKPAPSFIQ 198

Query: 65  EDEELASPEYDLNNPLLDSQP 86
           EDEE    EYDL++P LDSQP
Sbjct: 199 EDEEQVDLEYDLDDPFLDSQP 219

[Close]

BLAST of PI0027597 vs. ExPASy TrEMBL
Match: A0A0A0KYU0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G427780 PE=4 SV=1)

HSP 1 Score: 83.2 bits (204), Expect = 9.8e-13
Identity = 41/48 (85.42%), Postives = 43/48 (89.58%), Query Frame = 0


Query: 1  MKEWFLENGYLQDLDQRKNAEFLNDKSKLLAALAQATTDADFQRLLST 49
          MKEWF EN YLQD+DQRKN EFLNDKSKLLA LAQATTD +FQRLLST
Sbjct: 27 MKEWFAENNYLQDIDQRKNIEFLNDKSKLLALLAQATTDTNFQRLLST 74

[Close]

BLAST of PI0027597 vs. ExPASy TrEMBL
Match: A0A5A7U8A0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold76G00530 PE=4 SV=1)

HSP 1 Score: 82.4 bits (202), Expect = 1.7e-12
Identity = 47/58 (81.03%), Postives = 50/58 (86.21%), Query Frame = 0


Query: 26  KSKLLAALAQATTDADFQRLLSTAVNASSSSKLASSSIQEDEELASPEYDLNNPLLDS 84
           +SKLLAALAQATTDADFQRLLST VNASSSSK  SSSIQEDEE    EYDL++P LDS
Sbjct: 113 RSKLLAALAQATTDADFQRLLSTTVNASSSSKSPSSSIQEDEEQVDLEYDLDDPYLDS 170

[Close]

BLAST of PI0027597 vs. NCBI nr
Match: KAA0025901.1 (hypothetical protein E6C27_scaffold34G001890 [Cucumis melo var. makuwa])

HSP 1 Score: 128.6 bits (322), Expect = 4.2e-26
Identity = 65/86 (75.58%), Postives = 74/86 (86.05%), Query Frame = 0


Query: 1   MKEWFLENGYLQDLDQRKNAEFLNDKSKLLAALAQATTDADFQRLLSTAVNASSSSKLAS 60
           +KEWF+ENGYLQD+DQ KN +FLN+KSKLLA LAQATTDADFQRLL T VNAS+SSK  S
Sbjct: 59  IKEWFVENGYLQDIDQGKNVKFLNEKSKLLATLAQATTDADFQRLLPTTVNASTSSKSTS 118

Query: 61  SSIQEDEELASPEYDLNNPLLDSQPI 87
           S +QEDEE   PEYDL+NP LDSQP+
Sbjct: 119 SFLQEDEEQVDPEYDLDNPFLDSQPM 144

[Close]

BLAST of PI0027597 vs. NCBI nr
Match: KAA0034823.1 (hypothetical protein E6C27_scaffold213G00570 [Cucumis melo var. makuwa])

HSP 1 Score: 127.5 bits (319), Expect = 9.3e-26
Identity = 70/86 (81.40%), Postives = 75/86 (87.21%), Query Frame = 0


Query: 1   MKEWFLENGYLQDLDQRKNAEFLNDKSKLLAALAQATTDADFQRLLSTAVNASSSSKLAS 60
           +KEWF EN YLQD+DQRKN EFLNDKSKLL ALAQATTDADFQRLLSTAVNASSSSK  S
Sbjct: 24  IKEWFAENKYLQDIDQRKNVEFLNDKSKLLVALAQATTDADFQRLLSTAVNASSSSKSPS 83

Query: 61  SSIQEDEELASPEYDLNNPLLDSQPI 87
           SSIQEDEE   PEYDL++  LDSQP+
Sbjct: 84  SSIQEDEEQIDPEYDLDD--LDSQPM 107

[Close]

BLAST of PI0027597 vs. NCBI nr
Match: TYJ98361.1 (hypothetical protein E5676_scaffold232G00950 [Cucumis melo var. makuwa])

HSP 1 Score: 108.6 bits (270), Expect = 4.5e-20
Identity = 60/81 (74.07%), Postives = 66/81 (81.48%), Query Frame = 0


Query: 5   FLENGYLQDLDQRKNAEFLNDKSKLLAALAQATTDADFQRLLSTAVNASSSSKLASSSIQ 64
           + +NG LQD+DQRKNA+FLNDK K LAAL QAT DADFQRLLSTAVN SSSSK A S IQ
Sbjct: 139 YQKNGDLQDIDQRKNAKFLNDKLKFLAALVQATIDADFQRLLSTAVNTSSSSKPAPSFIQ 198

Query: 65  EDEELASPEYDLNNPLLDSQP 86
           EDEE    EYDL++P LDSQP
Sbjct: 199 EDEEQVDLEYDLDDPFLDSQP 219

[Close]

BLAST of PI0027597 vs. NCBI nr
Match: XP_031739746.1 (uncharacterized protein LOC116403279 [Cucumis sativus] >KAE8649669.1 hypothetical protein Csa_012459 [Cucumis sativus])

HSP 1 Score: 83.2 bits (204), Expect = 2.0e-12
Identity = 41/48 (85.42%), Postives = 43/48 (89.58%), Query Frame = 0


Query: 1  MKEWFLENGYLQDLDQRKNAEFLNDKSKLLAALAQATTDADFQRLLST 49
          MKEWF EN YLQD+DQRKN EFLNDKSKLLA LAQATTD +FQRLLST
Sbjct: 34 MKEWFAENNYLQDIDQRKNIEFLNDKSKLLALLAQATTDTNFQRLLST 81

[Close]

BLAST of PI0027597 vs. NCBI nr
Match: KAA0049709.1 (hypothetical protein E6C27_scaffold76G00530 [Cucumis melo var. makuwa])

HSP 1 Score: 82.4 bits (202), Expect = 3.4e-12
Identity = 47/58 (81.03%), Postives = 50/58 (86.21%), Query Frame = 0


Query: 26  KSKLLAALAQATTDADFQRLLSTAVNASSSSKLASSSIQEDEELASPEYDLNNPLLDS 84
           +SKLLAALAQATTDADFQRLLST VNASSSSK  SSSIQEDEE    EYDL++P LDS
Sbjct: 113 RSKLLAALAQATTDADFQRLLSTTVNASSSSKSPSSSIQEDEEQVDLEYDLDDPYLDS 170

The following BLAST results are available for this feature:

BLAST of PI0027597 vs.


Match Name	E-value	Identity	Description

BLAST of PI0027597 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7SNT5	2.0e-26	75.58	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5A7SWC0	4.5e-26	81.40	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5D3BI61	2.2e-20	74.07	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A0A0KYU0	9.8e-13	85.42	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G427780 PE=4 SV=1	[more]
A0A5A7U8A0	1.7e-12	81.03	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]

BLAST of PI0027597 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0025901.1	4.2e-26	75.58	hypothetical protein E6C27_scaffold34G001890 [Cucumis melo var. makuwa]	[more]
KAA0034823.1	9.3e-26	81.40	hypothetical protein E6C27_scaffold213G00570 [Cucumis melo var. makuwa]	[more]
TYJ98361.1	4.5e-20	74.07	hypothetical protein E5676_scaffold232G00950 [Cucumis melo var. makuwa]	[more]
XP_031739746.1	2.0e-12	85.42	uncharacterized protein LOC116403279 [Cucumis sativus] >KAE8649669.1 hypothetica...	[more]
KAA0049709.1	3.4e-12	81.03	hypothetical protein E6C27_scaffold76G00530 [Cucumis melo var. makuwa]	[more]

BLAST of PI0027597 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 119..143

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0027597.1	PI0027597.1	mRNA