PI0027593 (gene) Melon (PI 482460) v1

Overview


Name	PI0027593
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Unknown protein
Location	chr05: 17260338 .. 17260775 (+)
RNA-Seq Expression	PI0027593
Synteny	PI0027593

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAGATCAGCAAAGTGAGGTGGCGGGAGAGAATGAAGATGATGATTTTTACAAGTTCATCAATGACGTGATTGGCAAACCAATGATGGATGGACTTGAAGACATCTTACAAAACCAAGCCGATCTGCAAGAACGCGCGATGAGAGATGAGAAGCAGATTTTGGGCTTGGAGTTGAAACTTGACAATCATCATCAAGAACAACATGATTTGCTCGTCTCTGAGATTGTGAGCTTAAAAGTGCAAAACAAGCCGATGGTGAGTTTGATTAAGAAAGCATCGCTGCAGTCTGACAGGCAATACAAGTCAATAATGAATTACATCCATGCAACAATCACAAGTCTTGTGCCAAAGCCTACCATTCCACTAAAATTCGAAGAAGCCCTATCTGATGTTGAATTGGACGCCGCTCCAGGACCTTCCGAAGCACGACTATAA

mRNA sequence

ATGGAAGATCAGCAAAGTGAGGTGGCGGGAGAGAATGAAGATGATGATTTTTACAAGTTCATCAATGACGTGATTGGCAAACCAATGATGGATGGACTTGAAGACATCTTACAAAACCAAGCCGATCTGCAAGAACGCGCGATGAGAGATGAGAAGCAGATTTTGGGCTTGGAGTTGAAACTTGACAATCATCATCAAGAACAACATGATTTGCTCGTCTCTGAGATTGTGAGCTTAAAAGTGCAAAACAAGCCGATGGTGAGTTTGATTAAGAAAGCATCGCTGCAGTCTGACAGGCAATACAAGTCAATAATGAATTACATCCATGCAACAATCACAAGTCTTGTGCCAAAGCCTACCATTCCACTAAAATTCGAAGAAGCCCTATCTGATGTTGAATTGGACGCCGCTCCAGGACCTTCCGAAGCACGACTATAA

Coding sequence (CDS)

ATGGAAGATCAGCAAAGTGAGGTGGCGGGAGAGAATGAAGATGATGATTTTTACAAGTTCATCAATGACGTGATTGGCAAACCAATGATGGATGGACTTGAAGACATCTTACAAAACCAAGCCGATCTGCAAGAACGCGCGATGAGAGATGAGAAGCAGATTTTGGGCTTGGAGTTGAAACTTGACAATCATCATCAAGAACAACATGATTTGCTCGTCTCTGAGATTGTGAGCTTAAAAGTGCAAAACAAGCCGATGGTGAGTTTGATTAAGAAAGCATCGCTGCAGTCTGACAGGCAATACAAGTCAATAATGAATTACATCCATGCAACAATCACAAGTCTTGTGCCAAAGCCTACCATTCCACTAAAATTCGAAGAAGCCCTATCTGATGTTGAATTGGACGCCGCTCCAGGACCTTCCGAAGCACGACTATAA

Protein sequence

MEDQQSEVAGENEDDDFYKFINDVIGKPMMDGLEDILQNQADLQERAMRDEKQILGLELKLDNHHQEQHDLLVSEIVSLKVQNKPMVSLIKKASLQSDRQYKSIMNYIHATITSLVPKPTIPLKFEEALSDVELDAAPGPSEARL

Homology

[Close]

BLAST of PI0027593 vs. ExPASy TrEMBL
Match: A0A5D3DS12 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold313G00130 PE=4 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 5.4e-11
Identity = 46/89 (51.69%), Postives = 64/89 (71.91%), Query Frame = 0


Query: 14  DDDFYKFINDVIGKPMMDGLEDILQNQADLQERAMRDEKQILGLELKLDN---HHQEQHD 73
           DD+++KFI +  GKPM DG EDI Q QA+LQE  MR +KQ+  LEL++DN    HQ Q D
Sbjct: 11  DDEYFKFIKNNFGKPMRDGFEDIFQCQANLQE-GMRSQKQLQNLELRIDNKDLRHQAQLD 70

Query: 74  LLVSEIVSLKVQNKPMVSLIKKASLQSDR 100
           ++  +I SLK QN+ + +LIK+AS Q++R
Sbjct: 71  IIEVDI-SLKTQNRALNTLIKRASSQTNR 97

[Close]

BLAST of PI0027593 vs. ExPASy TrEMBL
Match: A0A5A7U0L9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold155G00960 PE=4 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 1.3e-09
Identity = 38/70 (54.29%), Postives = 50/70 (71.43%), Query Frame = 0


Query: 1  MEDQQSEVAGENEDDD-FYKFINDVIGKPMMDGLEDILQNQADLQERAMRDEKQILGLEL 60
          + +QQ   AGE++++D ++KFI D  GKP+MDG +D+ QNQ DLQE   R EKQI  LEL
Sbjct: 23 INNQQKNAAGESDNEDHYFKFIGDTFGKPVMDGFKDVFQNQVDLQECTWRHEKQIQDLEL 82

Query: 61 KLDN---HHQ 67
          K+DN   HHQ
Sbjct: 83 KIDNCNQHHQ 92

[Close]

BLAST of PI0027593 vs. ExPASy TrEMBL
Match: A0A5A7TWF8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold498G001090 PE=4 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 9.6e-08
Identity = 42/89 (47.19%), Postives = 59/89 (66.29%), Query Frame = 0


Query: 14  DDDFYKFINDVIGKPMMDGLEDILQNQADLQERAMRDEKQILGLELKLDN---HHQEQHD 73
           DD+++KFI +  GKPM DG EDI Q QA+LQE  MR +KQ+  LEL++DN    HQ Q D
Sbjct: 11  DDEYFKFIKNNFGKPMRDGFEDIFQCQANLQE-GMRSQKQLQNLELRIDNKDLRHQAQLD 70

Query: 74  LLVSEIVSLKVQNKPMVSLIKKASLQSDR 100
           ++  +IV LK   +  V  I +AS+ +D+
Sbjct: 71  IIEVDIVVLK-NAESSVKHIDQASIVADK 97

[Close]

BLAST of PI0027593 vs. ExPASy TrEMBL
Match: A0A5A7VKU1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold2484G00210 PE=4 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 7.6e-05
Identity = 36/89 (40.45%), Postives = 51/89 (57.30%), Query Frame = 0


Query: 62  DNHHQEQHDLLVSEIVSLKVQN-------KPMVSLIKKASLQSDRQYKSIMNYIHATITS 121
           D     + + + S+I  LK QN       + M + IK+ASL ++ Q +++MNYIH TI S
Sbjct: 122 DEDEYVKFEKIESDIAMLKTQNEAMQTQIQTMKTFIKQASLWTEMQCRTLMNYIHVTIVS 181

Query: 122 LVPKPTIPLKFEEALSDVELDAAPGPSEA 144
           LVP P  P + EE L++VE    PGP  A
Sbjct: 182 LVPTPIFPPELEEPLTEVE----PGPCAA 206

[Close]

BLAST of PI0027593 vs. ExPASy TrEMBL
Match: A0A5D3C5U6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold606G001830 PE=4 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 9.9e-05
Identity = 34/91 (37.36%), Postives = 58/91 (63.74%), Query Frame = 0


Query: 3   DQQSEVAGENEDDD----FYKFINDVIGKPMMDGLEDILQNQADLQERAMRDEKQILGLE 62
           +++ E A ++ED D     +KFI+D + KPM +G ED++Q Q++LQ+  +  +KQ+   E
Sbjct: 95  EEEKEAARKDEDGDDENYIFKFIDDYVCKPMSNGFEDVIQCQSNLQKMHLCCQKQLRDFE 154

Query: 63  LKLDN---HHQEQHDLLVSEIVSLKVQNKPM 87
           +KL N   HHQ Q + L +E+  L+ QN+ +
Sbjct: 155 VKLQNINHHHQAQIEGLKAEMQELRSQNQEL 185

[Close]

BLAST of PI0027593 vs. NCBI nr
Match: TYK26456.1 (hypothetical protein E5676_scaffold313G00130 [Cucumis melo var. makuwa])

HSP 1 Score: 77.4 bits (189), Expect = 1.1e-10
Identity = 46/89 (51.69%), Postives = 64/89 (71.91%), Query Frame = 0


Query: 14  DDDFYKFINDVIGKPMMDGLEDILQNQADLQERAMRDEKQILGLELKLDN---HHQEQHD 73
           DD+++KFI +  GKPM DG EDI Q QA+LQE  MR +KQ+  LEL++DN    HQ Q D
Sbjct: 11  DDEYFKFIKNNFGKPMRDGFEDIFQCQANLQE-GMRSQKQLQNLELRIDNKDLRHQAQLD 70

Query: 74  LLVSEIVSLKVQNKPMVSLIKKASLQSDR 100
           ++  +I SLK QN+ + +LIK+AS Q++R
Sbjct: 71  IIEVDI-SLKTQNRALNTLIKRASSQTNR 97

[Close]

BLAST of PI0027593 vs. NCBI nr
Match: KAA0047757.1 (hypothetical protein E6C27_scaffold1059G00180 [Cucumis melo var. makuwa] >TYK02391.1 hypothetical protein E5676_scaffold155G00960 [Cucumis melo var. makuwa])

HSP 1 Score: 72.8 bits (177), Expect = 2.8e-09
Identity = 38/70 (54.29%), Postives = 50/70 (71.43%), Query Frame = 0


Query: 1  MEDQQSEVAGENEDDD-FYKFINDVIGKPMMDGLEDILQNQADLQERAMRDEKQILGLEL 60
          + +QQ   AGE++++D ++KFI D  GKP+MDG +D+ QNQ DLQE   R EKQI  LEL
Sbjct: 23 INNQQKNAAGESDNEDHYFKFIGDTFGKPVMDGFKDVFQNQVDLQECTWRHEKQIQDLEL 82

Query: 61 KLDN---HHQ 67
          K+DN   HHQ
Sbjct: 83 KIDNCNQHHQ 92

[Close]

BLAST of PI0027593 vs. NCBI nr
Match: KAA0047490.1 (hypothetical protein E6C27_scaffold498G001090 [Cucumis melo var. makuwa])

HSP 1 Score: 66.6 bits (161), Expect = 2.0e-07
Identity = 42/89 (47.19%), Postives = 59/89 (66.29%), Query Frame = 0


Query: 14  DDDFYKFINDVIGKPMMDGLEDILQNQADLQERAMRDEKQILGLELKLDN---HHQEQHD 73
           DD+++KFI +  GKPM DG EDI Q QA+LQE  MR +KQ+  LEL++DN    HQ Q D
Sbjct: 11  DDEYFKFIKNNFGKPMRDGFEDIFQCQANLQE-GMRSQKQLQNLELRIDNKDLRHQAQLD 70

Query: 74  LLVSEIVSLKVQNKPMVSLIKKASLQSDR 100
           ++  +IV LK   +  V  I +AS+ +D+
Sbjct: 71  IIEVDIVVLK-NAESSVKHIDQASIVADK 97

[Close]

BLAST of PI0027593 vs. NCBI nr
Match: KAA0067817.1 (hypothetical protein E6C27_scaffold2484G00210 [Cucumis melo var. makuwa])

HSP 1 Score: 57.0 bits (136), Expect = 1.6e-04
Identity = 36/89 (40.45%), Postives = 51/89 (57.30%), Query Frame = 0


Query: 62  DNHHQEQHDLLVSEIVSLKVQN-------KPMVSLIKKASLQSDRQYKSIMNYIHATITS 121
           D     + + + S+I  LK QN       + M + IK+ASL ++ Q +++MNYIH TI S
Sbjct: 122 DEDEYVKFEKIESDIAMLKTQNEAMQTQIQTMKTFIKQASLWTEMQCRTLMNYIHVTIVS 181

Query: 122 LVPKPTIPLKFEEALSDVELDAAPGPSEA 144
           LVP P  P + EE L++VE    PGP  A
Sbjct: 182 LVPTPIFPPELEEPLTEVE----PGPCAA 206

[Close]

BLAST of PI0027593 vs. NCBI nr
Match: TYK07283.1 (hypothetical protein E5676_scaffold606G001830 [Cucumis melo var. makuwa])

HSP 1 Score: 56.6 bits (135), Expect = 2.0e-04
Identity = 34/91 (37.36%), Postives = 58/91 (63.74%), Query Frame = 0


Query: 3   DQQSEVAGENEDDD----FYKFINDVIGKPMMDGLEDILQNQADLQERAMRDEKQILGLE 62
           +++ E A ++ED D     +KFI+D + KPM +G ED++Q Q++LQ+  +  +KQ+   E
Sbjct: 95  EEEKEAARKDEDGDDENYIFKFIDDYVCKPMSNGFEDVIQCQSNLQKMHLCCQKQLRDFE 154

Query: 63  LKLDN---HHQEQHDLLVSEIVSLKVQNKPM 87
           +KL N   HHQ Q + L +E+  L+ QN+ +
Sbjct: 155 VKLQNINHHHQAQIEGLKAEMQELRSQNQEL 185

The following BLAST results are available for this feature:

BLAST of PI0027593 vs.


Match Name	E-value	Identity	Description

BLAST of PI0027593 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3DS12	5.4e-11	51.69	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7U0L9	1.3e-09	54.29	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7TWF8	9.6e-08	47.19	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5A7VKU1	7.6e-05	40.45	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5D3C5U6	9.9e-05	37.36	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]

BLAST of PI0027593 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK26456.1	1.1e-10	51.69	hypothetical protein E5676_scaffold313G00130 [Cucumis melo var. makuwa]	[more]
KAA0047757.1	2.8e-09	54.29	hypothetical protein E6C27_scaffold1059G00180 [Cucumis melo var. makuwa] >TYK023...	[more]
KAA0047490.1	2.0e-07	47.19	hypothetical protein E6C27_scaffold498G001090 [Cucumis melo var. makuwa]	[more]
KAA0067817.1	1.6e-04	40.45	hypothetical protein E6C27_scaffold2484G00210 [Cucumis melo var. makuwa]	[more]
TYK07283.1	2.0e-04	37.36	hypothetical protein E5676_scaffold606G001830 [Cucumis melo var. makuwa]	[more]

BLAST of PI0027593 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 33..53

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0027593.1	PI0027593.1	mRNA