PI0027582 (gene) Melon (PI 482460) v1

Overview


Name	PI0027582
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Unknown protein
Location	chr03: 20698109 .. 20699079 (+)
RNA-Seq Expression	PI0027582
Synteny	PI0027582

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCGCTACCCATCAATAGCTGAGGCTCTCTGGCTGCGAGCTATCCCTCCATTGAGTGCCCTCCCCCAAATGCATATTCCGAGCGAGCTTTTCAACCAGGCGTCTTTAAACCGCATGATCACTCTCAATGCACATAAGAAAGTGGAGAGGCATTTAAAGATGCTTAGCAACGAAGAAGAAGATGGGAGTGAGCCTCAGGTAAAGCCTCTCAAGAGAAAAGCTCCTGCCTCCGCATCAACCCTTAAACCAACTACAAAAAAACCAAAGGTTGATGCGAATGTACCACCCAGACCCTTCAAGATCATTCACCATTCCCCGCGCCCTAAGAAGCGAGCTCCCTCAAAAATCCAAACTCCACTAAAATCTCTCTGCCACTCTCCTCCTCACCCTACCCCTTTGCCCATTCCATCCCGCATCCTTTCGCCCGCCCTTCCTCAAATGGGCCCCAAAACGCGTTCCCCCCAATTCTCATTATTTCTGAAGAGGATGCACACCAAGATCACGCGGCATTTAGCCGTCCACCACCAAAGAAGGATACCAGAGGCCTCGTTGATGACCCACTCGCCAAGGAAAAAGCACATGTCCTTGACGAAGTTGGCGATACAGCCTCCTCGGCGCCTGCCCACAATGTTGCACCCATCGCGCCGCACGAAGACGAAGACCTGGGCGATTTACTTGGCACACTAGTTGGCAAGCTAGTGTTTGATTACTTTGATCAAGTACTGGCTCAGCAAACGAATCATGTGACGCAACTTGACGCATTAAAGGCATCTGTCGAGAAATTGCAACGCCCCACTACCAAACCCCTAATGACGCCCGCTTCTCAAAAAGACGTAAACCTTTTGAAGCGCAAGTTGAAGGACCTTTCGGCAAGCCACGTCCAGCTCTCCACCATAGTATCCACCTTCACCTCCCTGGCCATTGCACAATTCGAGATGATGAGGCAAATGTCCGCATGGCATGATCGGTAG

mRNA sequence

ATGCGCTACCCATCAATAGCTGAGGCTCTCTGGCTGCGAGCTATCCCTCCATTGAGTGCCCTCCCCCAAATGCATATTCCGAGCGAGCTTTTCAACCAGGCGTCTTTAAACCGCATGATCACTCTCAATGCACATAAGAAAGTGGAGAGGCATTTAAAGATGCTTAGCAACGAAGAAGAAGATGGGAGTGAGCCTCAGGATGCACACCAAGATCACGCGGCATTTAGCCGTCCACCACCAAAGAAGGATACCAGAGGCCTCGTTGATGACCCACTCGCCAAGGAAAAAGCACATGTCCTTGACGAAGTTGGCGATACAGCCTCCTCGGCGCCTGCCCACAATGTTGCACCCATCGCGCCGCACGAAGACGAAGACCTGGGCGATTTACTTGGCACACTAGTTGGCAAGCTAGTGTTTGATTACTTTGATCAAGTACTGGCTCAGCAAACGAATCATGTGACGCAACTTGACGCATTAAAGGCATCTGTCGAGAAATTGCAACGCCCCACTACCAAACCCCTAATGACGCCCGCTTCTCAAAAAGACGTAAACCTTTTGAAGCGCAAGTTGAAGGACCTTTCGGCAAGCCACGTCCAGCTCTCCACCATAGTATCCACCTTCACCTCCCTGGCCATTGCACAATTCGAGATGATGAGGCAAATGTCCGCATGGCATGATCGGTAG

Coding sequence (CDS)

ATGCGCTACCCATCAATAGCTGAGGCTCTCTGGCTGCGAGCTATCCCTCCATTGAGTGCCCTCCCCCAAATGCATATTCCGAGCGAGCTTTTCAACCAGGCGTCTTTAAACCGCATGATCACTCTCAATGCACATAAGAAAGTGGAGAGGCATTTAAAGATGCTTAGCAACGAAGAAGAAGATGGGAGTGAGCCTCAGGATGCACACCAAGATCACGCGGCATTTAGCCGTCCACCACCAAAGAAGGATACCAGAGGCCTCGTTGATGACCCACTCGCCAAGGAAAAAGCACATGTCCTTGACGAAGTTGGCGATACAGCCTCCTCGGCGCCTGCCCACAATGTTGCACCCATCGCGCCGCACGAAGACGAAGACCTGGGCGATTTACTTGGCACACTAGTTGGCAAGCTAGTGTTTGATTACTTTGATCAAGTACTGGCTCAGCAAACGAATCATGTGACGCAACTTGACGCATTAAAGGCATCTGTCGAGAAATTGCAACGCCCCACTACCAAACCCCTAATGACGCCCGCTTCTCAAAAAGACGTAAACCTTTTGAAGCGCAAGTTGAAGGACCTTTCGGCAAGCCACGTCCAGCTCTCCACCATAGTATCCACCTTCACCTCCCTGGCCATTGCACAATTCGAGATGATGAGGCAAATGTCCGCATGGCATGATCGGTAG

Protein sequence

MRYPSIAEALWLRAIPPLSALPQMHIPSELFNQASLNRMITLNAHKKVERHLKMLSNEEEDGSEPQDAHQDHAAFSRPPPKKDTRGLVDDPLAKEKAHVLDEVGDTASSAPAHNVAPIAPHEDEDLGDLLGTLVGKLVFDYFDQVLAQQTNHVTQLDALKASVEKLQRPTTKPLMTPASQKDVNLLKRKLKDLSASHVQLSTIVSTFTSLAIAQFEMMRQMSAWHDR

Homology

[Close]

BLAST of PI0027582 vs. ExPASy TrEMBL
Match: A0A5A7UFG4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold102G00220 PE=4 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 2.8e-06
Identity = 68/283 (24.03%), Postives = 103/283 (36.40%), Query Frame = 0


Query: 3   YPSIAEALWLRAIPPLSALPQMHIPSELFNQASLNRMITLNAHKKVERHLKMLSNEEE-- 62
           +PS+ E L+L+ IP L+ LPQ  IPS ++NQ +LNR+IT + +K+ E HLK L +E+E  
Sbjct: 161 FPSMMEKLYLKHIPSLAMLPQRKIPSRVYNQTTLNRVITFHQNKEEEYHLKTLGHEKEPE 220

Query: 63  ------------------------------------------------------------ 122
                                                                       
Sbjct: 221 GMEDKEDLPLSLPMKRTIASTSMQLGKKLKVDATKQVAKENNSTHCKKVTSLPGDELLCR 280

Query: 123 -------------------DGSEP------------------------------QDAHQD 173
                              D +EP                              +D  ++
Sbjct: 281 PYLFFPLINLPKTKTPPHLDLNEPLLVPKVVPQELIALPTKGAKESIPIVVLSERDMTRN 340

[Close]

BLAST of PI0027582 vs. ExPASy TrEMBL
Match: A0A5D3BEA4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold469G00170 PE=4 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 8.2e-06
Identity = 29/58 (50.00%), Postives = 43/58 (74.14%), Query Frame = 0


Query: 3   YPSIAEALWLRAIPPLSALPQMHIPSELFNQASLNRMITLNAHKKVERHLKMLSNEEE 61
           +PS+ E L+L+ IP L+ LPQ  IPS ++NQ +LNR+IT + +K+ E HLK L +E+E
Sbjct: 161 FPSMMEKLYLKHIPSLAMLPQRKIPSRVYNQTTLNRVITFHQNKEEEYHLKTLGHEKE 218

[Close]

BLAST of PI0027582 vs. ExPASy TrEMBL
Match: A0A5A7SLS8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold409G00080 PE=4 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 7.7e-04
Identity = 44/113 (38.94%), Postives = 59/113 (52.21%), Query Frame = 0


Query: 1   MRYPSIAEALWLRAIPPLSALPQMHIPSELFNQASLNRMITLNAHKKVERHLKMLS---N 60
           M +PS  EAL L+A+P L A  Q  I   + +QA+LN+ ITL+ +K+ ERHLK L+    
Sbjct: 33  MPFPSTIEALCLKAVPKLLAFSQAPIFGSVSSQATLNQTITLHQNKEEERHLKTLNKVKG 92

Query: 61  EEEDGSEPQDAHQDHAAFSRPPPKKDTRGLVDDPLAKEKAHVLDEVGDTASSA 111
           EEE+ S P            PPP          PL ++KAH      D ASS+
Sbjct: 93  EEEEASLP------------PPP---------SPLKRKKAH------DNASSS 118

[Close]

BLAST of PI0027582 vs. NCBI nr
Match: KAA0053237.1 (hypothetical protein E6C27_scaffold102G00220 [Cucumis melo var. makuwa])

HSP 1 Score: 62.4 bits (150), Expect = 5.8e-06
Identity = 68/283 (24.03%), Postives = 103/283 (36.40%), Query Frame = 0


Query: 3   YPSIAEALWLRAIPPLSALPQMHIPSELFNQASLNRMITLNAHKKVERHLKMLSNEEE-- 62
           +PS+ E L+L+ IP L+ LPQ  IPS ++NQ +LNR+IT + +K+ E HLK L +E+E  
Sbjct: 161 FPSMMEKLYLKHIPSLAMLPQRKIPSRVYNQTTLNRVITFHQNKEEEYHLKTLGHEKEPE 220

Query: 63  ------------------------------------------------------------ 122
                                                                       
Sbjct: 221 GMEDKEDLPLSLPMKRTIASTSMQLGKKLKVDATKQVAKENNSTHCKKVTSLPGDELLCR 280

Query: 123 -------------------DGSEP------------------------------QDAHQD 173
                              D +EP                              +D  ++
Sbjct: 281 PYLFFPLINLPKTKTPPHLDLNEPLLVPKVVPQELIALPTKGAKESIPIVVLSERDMTRN 340

[Close]

BLAST of PI0027582 vs. NCBI nr
Match: TYJ97633.1 (hypothetical protein E5676_scaffold469G00170 [Cucumis melo var. makuwa])

HSP 1 Score: 60.8 bits (146), Expect = 1.7e-05
Identity = 29/58 (50.00%), Postives = 43/58 (74.14%), Query Frame = 0


Query: 3   YPSIAEALWLRAIPPLSALPQMHIPSELFNQASLNRMITLNAHKKVERHLKMLSNEEE 61
           +PS+ E L+L+ IP L+ LPQ  IPS ++NQ +LNR+IT + +K+ E HLK L +E+E
Sbjct: 161 FPSMMEKLYLKHIPSLAMLPQRKIPSRVYNQTTLNRVITFHQNKEEEYHLKTLGHEKE 218

The following BLAST results are available for this feature:

BLAST of PI0027582 vs.


Match Name	E-value	Identity	Description

BLAST of PI0027582 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UFG4	2.8e-06	24.03	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5D3BEA4	8.2e-06	50.00	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7SLS8	7.7e-04	38.94	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]

BLAST of PI0027582 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0053237.1	5.8e-06	24.03	hypothetical protein E6C27_scaffold102G00220 [Cucumis melo var. makuwa]	[more]
TYJ97633.1	1.7e-05	50.00	hypothetical protein E5676_scaffold469G00170 [Cucumis melo var. makuwa]	[more]

BLAST of PI0027582 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 56..88

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0027582.1	PI0027582.1	mRNA