PI0027557 (gene) Melon (PI 482460) v1

Overview
NamePI0027557
Typegene
OrganismCucumis metuliferus (Melon (PI 482460) v1)
DescriptionTranscription activator-like protein
Locationchr07: 24370741 .. 24371312 (+)
RNA-Seq ExpressionPI0027557
SyntenyPI0027557
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AAAAATAAACTCGAATTAAAGATATAAAAAAGGGTAAAAACGATTTAAAGCAATGGGGATTTTTGGTCGAATTACCCTAAAATGGAAAACAAGCAGAAGATAGAGATGGAGAGGGAGCAACAGAGGCGAGAAGAATCGAAGAAGATAGAGCAAGAACCGCCATACTATATTTCCCCGATGCAGCCATTGACGGAAAGTGCTTACGGCGGAGGAATGTACGGCACCGAGGAAGGAGATCAGGGAAGCCTACAGAAGAAAGTACCTGCAAGCGAGACGCAGAGCGCCGATGGACCAGTTGAAGCGGAAATGAAGCTAAAGCATCCGCCTCCGCCGTCCTCTGGTGACAGAGACATTGACATCACCGGGCAATCGTATTTCCAGTAGCCTGAAAAGCTCGTGAAGGCTGCCGATTGCGTATTGTAAATGTGTTTAATAATGGCGATCGAGAGGTAGTTTGTTTCATGTAATTTGGTTCGTTTCTTTACTTGATTAATGCGTTTTTTATGGATCTATGAATGATTGCAACAGTTATTTCCAAGAGATTGAGTATACAACTTAACCTAAAATAATAT

mRNA sequence

AAAAATAAACTCGAATTAAAGATATAAAAAAGGGTAAAAACGATTTAAAGCAATGGGGATTTTTGGTCGAATTACCCTAAAATGGAAAACAAGCAGAAGATAGAGATGGAGAGGGAGCAACAGAGGCGAGAAGAATCGAAGAAGATAGAGCAAGAACCGCCATACTATATTTCCCCGATGCAGCCATTGACGGAAAGTGCTTACGGCGGAGGAATGTACGGCACCGAGGAAGGAGATCAGGGAAGCCTACAGAAGAAAGTACCTGCAAGCGAGACGCAGAGCGCCGATGGACCAGTTGAAGCGGAAATGAAGCTAAAGCATCCGCCTCCGCCGTCCTCTGGTGACAGAGACATTGACATCACCGGGCAATCGTATTTCCAGTAGCCTGAAAAGCTCGTGAAGGCTGCCGATTGCGTATTGTAAATGTGTTTAATAATGGCGATCGAGAGGTAGTTTGTTTCATGTAATTTGGTTCGTTTCTTTACTTGATTAATGCGTTTTTTATGGATCTATGAATGATTGCAACAGTTATTTCCAAGAGATTGAGTATACAACTTAACCTAAAATAATAT

Coding sequence (CDS)

ATGGAAAACAAGCAGAAGATAGAGATGGAGAGGGAGCAACAGAGGCGAGAAGAATCGAAGAAGATAGAGCAAGAACCGCCATACTATATTTCCCCGATGCAGCCATTGACGGAAAGTGCTTACGGCGGAGGAATGTACGGCACCGAGGAAGGAGATCAGGGAAGCCTACAGAAGAAAGTACCTGCAAGCGAGACGCAGAGCGCCGATGGACCAGTTGAAGCGGAAATGAAGCTAAAGCATCCGCCTCCGCCGTCCTCTGGTGACAGAGACATTGACATCACCGGGCAATCGTATTTCCAGTAG

Protein sequence

MENKQKIEMEREQQRREESKKIEQEPPYYISPMQPLTESAYGGGMYGTEEGDQGSLQKKVPASETQSADGPVEAEMKLKHPPPPSSGDRDIDITGQSYFQ
Homology
[Close]
BLAST of PI0027557 vs. ExPASy TrEMBL
Match: A0A1S3BV26 (uncharacterized protein LOC103493802 OS=Cucumis melo OX=3656 GN=LOC103493802 PE=4 SV=1)

HSP 1 Score: 183.7 bits (465), Expect = 3.7e-43
Identity = 96/101 (95.05%), Postives = 99/101 (98.02%), Query Frame = 0 

Query: 1   MENKQKIEMEREQQRREESKKIEQEPPYYISPMQPLTESAYGGGMYGTEEGDQGSLQ-KK 60
           MENKQ+IEMEREQQRRE+SKKIEQEPPYYISPMQPLTESAYGGGMYGTEEGDQ SLQ KK
Sbjct: 1   MENKQRIEMEREQQRREQSKKIEQEPPYYISPMQPLTESAYGGGMYGTEEGDQESLQMKK 60

Query: 61  VPASETQSADGPVEAEMKLKHPPPPSSGDRDIDITGQSYFQ 101
           VPAS+TQSADGPVEAEMKLKHPPPPSSGDRDIDITGQSYFQ
Sbjct: 61  VPASQTQSADGPVEAEMKLKHPPPPSSGDRDIDITGQSYFQ 101

[Close]
BLAST of PI0027557 vs. ExPASy TrEMBL
Match: A0A0A0L393 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G658490 PE=4 SV=1)

HSP 1 Score: 170.2 bits (430), Expect = 4.2e-39
Identity = 93/102 (91.18%), Postives = 95/102 (93.14%), Query Frame = 0 

Query: 1   MENKQKIEMEREQQRREESKKIEQEPPYYISPMQPLTESAYGGGMYGTEE-GDQGSLQ-K 60
           MENKQKIEMEREQQRREESKKIEQEPPYYIS MQPLTE AYGGGMYGT++ GDQ SLQ K
Sbjct: 1   MENKQKIEMEREQQRREESKKIEQEPPYYISRMQPLTECAYGGGMYGTDDKGDQDSLQIK 60

Query: 61  KVPASETQSADGPVEAEMKLKHPPPPSSGDRDIDITGQSYFQ 101
           KVPAS TQSADGPV AEMKLKHPPPPSSGDRDIDITGQSYFQ
Sbjct: 61  KVPASTTQSADGPVVAEMKLKHPPPPSSGDRDIDITGQSYFQ 102

[Close]
BLAST of PI0027557 vs. ExPASy TrEMBL
Match: A0A6J1IJZ9 (uncharacterized protein LOC111476971 OS=Cucurbita maxima OX=3661 GN=LOC111476971 PE=4 SV=1)

HSP 1 Score: 162.2 bits (409), Expect = 1.2e-36
Identity = 85/100 (85.00%), Postives = 91/100 (91.00%), Query Frame = 0 

Query: 1   MENKQKIEMEREQQRREESKKIEQEPPYYISPMQPLTESAYGGGMYGTEEGDQGSLQKKV 60
           ME  QK+EMEREQQRREE+KK+EQEPP+YISPMQPLTESAYGGGMYG EEG Q SLQKK 
Sbjct: 1   METNQKVEMEREQQRREETKKLEQEPPHYISPMQPLTESAYGGGMYGAEEGQQQSLQKK- 60

Query: 61  PASETQSADGPVEAEMKLKHPPPPSSGDRDIDITGQSYFQ 101
           PAS+TQSADGPVE+ MK KH PPPSSGDRDIDITGQSYFQ
Sbjct: 61  PASDTQSADGPVESGMKPKHAPPPSSGDRDIDITGQSYFQ 99

[Close]
BLAST of PI0027557 vs. ExPASy TrEMBL
Match: A0A6J1FEB2 (uncharacterized protein LOC111443294 OS=Cucurbita moschata OX=3662 GN=LOC111443294 PE=4 SV=1)

HSP 1 Score: 162.2 bits (409), Expect = 1.2e-36
Identity = 85/100 (85.00%), Postives = 91/100 (91.00%), Query Frame = 0 

Query: 1   MENKQKIEMEREQQRREESKKIEQEPPYYISPMQPLTESAYGGGMYGTEEGDQGSLQKKV 60
           ME  QK+EMEREQQRREE+KK+EQEPP+YISPMQPLTESAYGGGMYG EEG Q SLQKK 
Sbjct: 1   METNQKVEMEREQQRREETKKLEQEPPHYISPMQPLTESAYGGGMYGAEEGQQQSLQKK- 60

Query: 61  PASETQSADGPVEAEMKLKHPPPPSSGDRDIDITGQSYFQ 101
           PAS+TQSADGPVE+ MK KH PPPSSGDRDIDITGQSYFQ
Sbjct: 61  PASDTQSADGPVESGMKPKHAPPPSSGDRDIDITGQSYFQ 99

[Close]
BLAST of PI0027557 vs. ExPASy TrEMBL
Match: A0A6J1BT98 (uncharacterized protein LOC111005558 OS=Momordica charantia OX=3673 GN=LOC111005558 PE=4 SV=1)

HSP 1 Score: 152.5 bits (384), Expect = 9.2e-34
Identity = 82/100 (82.00%), Postives = 88/100 (88.00%), Query Frame = 0 

Query: 1   MENKQKIEMEREQQRREESKKIEQEPPYYISPMQPLTESAYGGGMYGTEEGDQGSLQKKV 60
           ME  QKIEMERE+QRREE+KK+EQ+PP  ISPMQPLTESAYGGGMYG EEG Q  L+KK 
Sbjct: 1   MERNQKIEMEREEQRREETKKMEQQPPQNISPMQPLTESAYGGGMYGAEEGQQQLLKKK- 60

Query: 61  PASETQSADGPVEAEMKLKHPPPPSSGDRDIDITGQSYFQ 101
           PAS+TQSADGPVEA MK KH PPPSSGDRDIDITGQSYFQ
Sbjct: 61  PASDTQSADGPVEAGMKPKHAPPPSSGDRDIDITGQSYFQ 99

[Close]
BLAST of PI0027557 vs. NCBI nr
Match: XP_008452943.1 (PREDICTED: uncharacterized protein LOC103493802 [Cucumis melo])

HSP 1 Score: 183.7 bits (465), Expect = 7.7e-43
Identity = 96/101 (95.05%), Postives = 99/101 (98.02%), Query Frame = 0 

Query: 1   MENKQKIEMEREQQRREESKKIEQEPPYYISPMQPLTESAYGGGMYGTEEGDQGSLQ-KK 60
           MENKQ+IEMEREQQRRE+SKKIEQEPPYYISPMQPLTESAYGGGMYGTEEGDQ SLQ KK
Sbjct: 1   MENKQRIEMEREQQRREQSKKIEQEPPYYISPMQPLTESAYGGGMYGTEEGDQESLQMKK 60

Query: 61  VPASETQSADGPVEAEMKLKHPPPPSSGDRDIDITGQSYFQ 101
           VPAS+TQSADGPVEAEMKLKHPPPPSSGDRDIDITGQSYFQ
Sbjct: 61  VPASQTQSADGPVEAEMKLKHPPPPSSGDRDIDITGQSYFQ 101

[Close]
BLAST of PI0027557 vs. NCBI nr
Match: XP_011654420.1 (uncharacterized protein LOC105435391 [Cucumis sativus])

HSP 1 Score: 170.2 bits (430), Expect = 8.8e-39
Identity = 93/102 (91.18%), Postives = 95/102 (93.14%), Query Frame = 0 

Query: 1   MENKQKIEMEREQQRREESKKIEQEPPYYISPMQPLTESAYGGGMYGTEE-GDQGSLQ-K 60
           MENKQKIEMEREQQRREESKKIEQEPPYYIS MQPLTE AYGGGMYGT++ GDQ SLQ K
Sbjct: 1   MENKQKIEMEREQQRREESKKIEQEPPYYISRMQPLTECAYGGGMYGTDDKGDQDSLQIK 60

Query: 61  KVPASETQSADGPVEAEMKLKHPPPPSSGDRDIDITGQSYFQ 101
           KVPAS TQSADGPV AEMKLKHPPPPSSGDRDIDITGQSYFQ
Sbjct: 61  KVPASTTQSADGPVVAEMKLKHPPPPSSGDRDIDITGQSYFQ 102

[Close]
BLAST of PI0027557 vs. NCBI nr
Match: KAG6591229.1 (hypothetical protein SDJN03_13575, partial [Cucurbita argyrosperma subsp. sororia] >KAG7024115.1 hypothetical protein SDJN02_12928, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 164.1 bits (414), Expect = 6.3e-37
Identity = 86/100 (86.00%), Postives = 92/100 (92.00%), Query Frame = 0 

Query: 1   MENKQKIEMEREQQRREESKKIEQEPPYYISPMQPLTESAYGGGMYGTEEGDQGSLQKKV 60
           ME  QK+EMEREQQRREE+KK+EQEPP+YISPMQPLTESAYGGGMYGTEEG Q SLQKK 
Sbjct: 1   METNQKVEMEREQQRREETKKLEQEPPHYISPMQPLTESAYGGGMYGTEEGQQQSLQKK- 60

Query: 61  PASETQSADGPVEAEMKLKHPPPPSSGDRDIDITGQSYFQ 101
           PAS+TQSADGPVE+ MK KH PPPSSGDRDIDITGQSYFQ
Sbjct: 61  PASDTQSADGPVESGMKPKHAPPPSSGDRDIDITGQSYFQ 99

[Close]
BLAST of PI0027557 vs. NCBI nr
Match: XP_022936823.1 (uncharacterized protein LOC111443294 [Cucurbita moschata] >XP_022976625.1 uncharacterized protein LOC111476971 [Cucurbita maxima] >XP_023535795.1 uncharacterized protein LOC111797123 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 162.2 bits (409), Expect = 2.4e-36
Identity = 85/100 (85.00%), Postives = 91/100 (91.00%), Query Frame = 0 

Query: 1   MENKQKIEMEREQQRREESKKIEQEPPYYISPMQPLTESAYGGGMYGTEEGDQGSLQKKV 60
           ME  QK+EMEREQQRREE+KK+EQEPP+YISPMQPLTESAYGGGMYG EEG Q SLQKK 
Sbjct: 1   METNQKVEMEREQQRREETKKLEQEPPHYISPMQPLTESAYGGGMYGAEEGQQQSLQKK- 60

Query: 61  PASETQSADGPVEAEMKLKHPPPPSSGDRDIDITGQSYFQ 101
           PAS+TQSADGPVE+ MK KH PPPSSGDRDIDITGQSYFQ
Sbjct: 61  PASDTQSADGPVESGMKPKHAPPPSSGDRDIDITGQSYFQ 99

[Close]
BLAST of PI0027557 vs. NCBI nr
Match: XP_038899828.1 (uncharacterized protein LOC120087055 [Benincasa hispida])

HSP 1 Score: 161.8 bits (408), Expect = 3.1e-36
Identity = 85/100 (85.00%), Postives = 93/100 (93.00%), Query Frame = 0 

Query: 1   MENKQKIEMEREQQRREESKKIEQEPPYYISPMQPLTESAYGGGMYGTEEGDQGSLQKKV 60
           ME+ QK+EMEREQQRREESKK+EQ+PP+YISPM+PLTESAYGGGMYG EEG++ SLQKK 
Sbjct: 1   MESNQKMEMEREQQRREESKKMEQQPPHYISPMKPLTESAYGGGMYGGEEGEERSLQKK- 60

Query: 61  PASETQSADGPVEAEMKLKHPPPPSSGDRDIDITGQSYFQ 101
           PASETQSADGPVE EMK KH PPPSSGDRDIDITGQSYFQ
Sbjct: 61  PASETQSADGPVEREMKPKHAPPPSSGDRDIDITGQSYFQ 99

[Close]
BLAST of PI0027557 vs. TAIR 10
Match: AT5G42290.1 (transcription activator-related )

HSP 1 Score: 79.7 bits (195), Expect = 1.5e-15
Identity = 50/110 (45.45%), Postives = 67/110 (60.91%), Query Frame = 0 

Query: 9   MEREQQRREESKKIEQEP----PYYISPMQPLTESAYGGGMYGTEEG------------- 68
           ME+E ++  E  + + EP    P YIS MQP+T  AYGGG+YG ++              
Sbjct: 1   MEKEPKQEPEEGRDKYEPHQHQPPYISQMQPVTHEAYGGGLYGQDDEKETTNLEKEAKNI 60

Query: 69  DQGSLQKKVPASETQSADGPVEAE-MKLKHPPPPSSGDRDIDITGQSYFQ 101
           ++   Q++ PAS+TQSADGP E + +  KH  P SSGDRD+DITGQSY Q
Sbjct: 61  EKEPQQQRPPASDTQSADGPDEVKTLTPKHKQPASSGDRDVDITGQSYIQ 110

The following BLAST results are available for this feature:
BLAST of PI0027557 vs.
Match NameE-valueIdentityDescription
BLAST of PI0027557 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A1S3BV263.7e-4395.05uncharacterized protein LOC103493802 OS=Cucumis melo OX=3656 GN=LOC103493802 PE=... [more]
A0A0A0L3934.2e-3991.18Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G658490 PE=4 SV=1[more]
A0A6J1IJZ91.2e-3685.00uncharacterized protein LOC111476971 OS=Cucurbita maxima OX=3661 GN=LOC111476971... [more]
A0A6J1FEB21.2e-3685.00uncharacterized protein LOC111443294 OS=Cucurbita moschata OX=3662 GN=LOC1114432... [more]
A0A6J1BT989.2e-3482.00uncharacterized protein LOC111005558 OS=Momordica charantia OX=3673 GN=LOC111005... [more]
BLAST of PI0027557 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008452943.17.7e-4395.05PREDICTED: uncharacterized protein LOC103493802 [Cucumis melo][more]
XP_011654420.18.8e-3991.18uncharacterized protein LOC105435391 [Cucumis sativus][more]
KAG6591229.16.3e-3786.00hypothetical protein SDJN03_13575, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_022936823.12.4e-3685.00uncharacterized protein LOC111443294 [Cucurbita moschata] >XP_022976625.1 unchar... [more]
XP_038899828.13.1e-3685.00uncharacterized protein LOC120087055 [Benincasa hispida][more]
BLAST of PI0027557 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G42290.11.5e-1545.45transcription activator-related [more]
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..24
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..100

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
PI0027557.1PI0027557.1mRNA