PI0027534 (gene) Melon (PI 482460) v1

Overview
NamePI0027534
Typegene
OrganismCucumis metuliferus (Melon (PI 482460) v1)
DescriptionReverse transcriptase Ty1/copia-type domain-containing protein
Locationchr10: 3039304 .. 3040907 (+)
RNA-Seq ExpressionPI0027534
SyntenyPI0027534
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCATGGAGTTCGTTTAAGAGGAGGAGCCCATTTTAAATGTATTCATGCACGTCGTCCCTTTGGAAAATCTTCTATAATTGGTAAGTCTTCGATTTTACCTCCTACTAAGTTAAACTTGCATTCTCATTCTCTTGTGTCTCATCCAACATCATCAATTGAGCATTCTGACACTGATTCTGATGAACAAGTTCATGTTAGCTTGGATACTTTGGTCCGTCGATCATCGGCTTCCAAGCCTTGTCAAGAACCCTCTCAGACTAAATCTGCAAAACCTTCTTCCTCTACATATCATCCATCTGGTTCTCCTTATCCTCATTTAGAACCTGTTACTACAAAACCTATCCCTTCTGATTCTATTCCATTTCCTAACGCCCCTTCATCTCAAAATGTGTCATCTTCTCCTATTTCAGAACCTGTGTTCTCCTCAATTCCTCATGTTCCTAGTTCCTCTGTTCCTCTATCTAAACCTGTTTGTCCTGATGAGTTCTCTATTCCTTCCCATGAGCTGAGAGCTTATGTTCCTAACTCACCCACCGTTCCTTCCAACAAATCTCACATTATTACTACTAAAGCTGGAAGGAAGAAACTACCTCCTAATATTCCTTCAGTTCCCATTGATGGAATCTCTTTTCATCATGAGGAGAATGTCCAGAAGTGGAAGTATGTTGTTCAAAGACGAATTGTTGATGAATCAAACATCTCTGATAAACACCAGTCGTGTCTTAGTATCATTAATTTAATTGCTAAAGTAGGTTTGTCCAAAACGGTTTCAAATGTTGGCCCCTTTATCCTAGACTTATCCAAGAGTTAATTGTGAATCTTTCCACAGATTTTAATAATCCTAGCAGTCAAGATTTTCAGGATGTGCATATTCGTGGCCTCATTTTTAAACTTTCGCCATCCATCATTAATGAATTTCTTGAGCTCTAGTTATCACAATCCTCTCCTTCACCTCCTCTTTCACCAGAAGTTGTGGCTTCTGAACTAACTGGAGGATCCCTTAGAGTCTGGCCTTCAAATGGTTCGATTTTTGTTATTTCTCTTAGTGTCAAGTATGTGATTCTGCATAAAGTTGGCATTGCAAATTGGTTTCCCTCTTTACATGCATCTAGTGTTTTAGCTGCTCTAGCCTCATTTCTGTACCAAATTGGTACTGGTGACCAAGTTGATGTTGGATCTTTTATCTTGTCCCAACTGCTTAAACATGTGGGATCTTTTGGTGTTAAAATTTCCATTCCTTTTCCTCTGCTTTTGTCTAGTCTGTTGTTACATCAACATTCGGGGATTCTGTTAGTCTCTAATGCTCCTGGTCTAGCCCCAAAAACCTTGTCCCTTAGATACAGACTCTTTCAAGGTTCACATGCTTCTGATCTTGCTCCATTTGACCAGCCATCAAGTGGTCCTTCTTCAACAGAGCATTTTGATATTCCTTCTACTGGGCTGCTTATTCCCTCATCCTTGGCCTCCAGGATTTTTGATCTGTTGTCTACTGAATCACAAGTTCTGGGAAACTCGATTTCTATCTTGTCTGCCAGGCGTTTTGAAGTTGATGCTTTACTTCGTCACTTAAAGGCACTGTTTCCTTCCAATTCTACTCAATGA

mRNA sequence

ATGCATGGAGTTCGTTTAAGAGGAGGAGCCCATTTTAAATGTATTCATGCACGTCGTCCCTTTGGAAAATCTTCTATAATTGGTAAGTCTTCGATTTTACCTCCTACTAAGTTAAACTTGCATTCTCATTCTCTTGTGTCTCATCCAACATCATCAATTGAGCATTCTGACACTGATTCTGATGAACAAGTTCATGTTAGCTTGGATACTTTGGTCCGTCGATCATCGGCTTCCAAGCCTTGTCAAGAACCCTCTCAGACTAAATCTGCAAAACCTTCTTCCTCTACATATCATCCATCTGGTTCTCCTTATCCTCATTTAGAACCTGTTACTACAAAACCTATCCCTTCTGATTCTATTCCATTTCCTAACGCCCCTTCATCTCAAAATGTGTCATCTTCTCCTATTTCAGAACCTGTGTTCTCCTCAATTCCTCATGTTCCTAGTTCCTCTGTTCCTCTATCTAAACCTGTTTGTCCTGATGAGTTCTCTATTCCTTCCCATGAGCTGAGAGCTTATTTATCACAATCCTCTCCTTCACCTCCTCTTTCACCAGAAGTTGTGGCTTCTGAACTAACTGGAGGATCCCTTAGAGTCTGGCCTTCAAATGGTTCGATTTTTGTTATTTCTCTTAGTGTCAAGTATGTGATTCTGCATAAAGTTGGCATTGCAAATTGGTTTCCCTCTTTACATGCATCTAGTGTTTTAGCTGCTCTAGCCTCATTTCTGTACCAAATTGGTACTGGTGACCAAGTTGATGTTGGATCTTTTATCTTGTCCCAACTGCTTAAACATGTGGGATCTTTTGGTGTTAAAATTTCCATTCCTTTTCCTCTGCTTTTGTCTAGTCTGTTGTTACATCAACATTCGGGGATTCTGTTAGTCTCTAATGCTCCTGGTCTAGCCCCAAAAACCTTGTCCCTTAGATACAGACTCTTTCAAGGTTCACATGCTTCTGATCTTGCTCCATTTGACCAGCCATCAAGTGGTCCTTCTTCAACAGAGCATTTTGATATTCCTTCTACTGGGCTGCTTATTCCCTCATCCTTGGCCTCCAGGATTTTTGATCTGTTGTCTACTGAATCACAAGTTCTGGGAAACTCGATTTCTATCTTGTCTGCCAGGCGTTTTGAAGTTGATGCTTTACTTCGTCACTTAAAGGCACTGTTTCCTTCCAATTCTACTCAATGA

Coding sequence (CDS)

ATGCATGGAGTTCGTTTAAGAGGAGGAGCCCATTTTAAATGTATTCATGCACGTCGTCCCTTTGGAAAATCTTCTATAATTGGTAAGTCTTCGATTTTACCTCCTACTAAGTTAAACTTGCATTCTCATTCTCTTGTGTCTCATCCAACATCATCAATTGAGCATTCTGACACTGATTCTGATGAACAAGTTCATGTTAGCTTGGATACTTTGGTCCGTCGATCATCGGCTTCCAAGCCTTGTCAAGAACCCTCTCAGACTAAATCTGCAAAACCTTCTTCCTCTACATATCATCCATCTGGTTCTCCTTATCCTCATTTAGAACCTGTTACTACAAAACCTATCCCTTCTGATTCTATTCCATTTCCTAACGCCCCTTCATCTCAAAATGTGTCATCTTCTCCTATTTCAGAACCTGTGTTCTCCTCAATTCCTCATGTTCCTAGTTCCTCTGTTCCTCTATCTAAACCTGTTTGTCCTGATGAGTTCTCTATTCCTTCCCATGAGCTGAGAGCTTATTTATCACAATCCTCTCCTTCACCTCCTCTTTCACCAGAAGTTGTGGCTTCTGAACTAACTGGAGGATCCCTTAGAGTCTGGCCTTCAAATGGTTCGATTTTTGTTATTTCTCTTAGTGTCAAGTATGTGATTCTGCATAAAGTTGGCATTGCAAATTGGTTTCCCTCTTTACATGCATCTAGTGTTTTAGCTGCTCTAGCCTCATTTCTGTACCAAATTGGTACTGGTGACCAAGTTGATGTTGGATCTTTTATCTTGTCCCAACTGCTTAAACATGTGGGATCTTTTGGTGTTAAAATTTCCATTCCTTTTCCTCTGCTTTTGTCTAGTCTGTTGTTACATCAACATTCGGGGATTCTGTTAGTCTCTAATGCTCCTGGTCTAGCCCCAAAAACCTTGTCCCTTAGATACAGACTCTTTCAAGGTTCACATGCTTCTGATCTTGCTCCATTTGACCAGCCATCAAGTGGTCCTTCTTCAACAGAGCATTTTGATATTCCTTCTACTGGGCTGCTTATTCCCTCATCCTTGGCCTCCAGGATTTTTGATCTGTTGTCTACTGAATCACAAGTTCTGGGAAACTCGATTTCTATCTTGTCTGCCAGGCGTTTTGAAGTTGATGCTTTACTTCGTCACTTAAAGGCACTGTTTCCTTCCAATTCTACTCAATGA

Protein sequence

MHGVRLRGGAHFKCIHARRPFGKSSIIGKSSILPPTKLNLHSHSLVSHPTSSIEHSDTDSDEQVHVSLDTLVRRSSASKPCQEPSQTKSAKPSSSTYHPSGSPYPHLEPVTTKPIPSDSIPFPNAPSSQNVSSSPISEPVFSSIPHVPSSSVPLSKPVCPDEFSIPSHELRAYLSQSSPSPPLSPEVVASELTGGSLRVWPSNGSIFVISLSVKYVILHKVGIANWFPSLHASSVLAALASFLYQIGTGDQVDVGSFILSQLLKHVGSFGVKISIPFPLLLSSLLLHQHSGILLVSNAPGLAPKTLSLRYRLFQGSHASDLAPFDQPSSGPSSTEHFDIPSTGLLIPSSLASRIFDLLSTESQVLGNSISILSARRFEVDALLRHLKALFPSNSTQ
Homology
BLAST of PI0027534 vs. ExPASy TrEMBL
Match: A0A5A7T169 (F5J5.1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold56G001730 PE=4 SV=1)

HSP 1 Score: 216.9 bits (551), Expect = 1.6e-52
Identity = 118/216 (54.63%), Postives = 150/216 (69.44%), Query Frame = 0

Query: 183  LSPEVVASELTGGSLRVWPSNGSIFVISLSVKYVILHKVGIANWFPSLHASSVLAALASF 242
            L+ E++A+ L+ G+L  WP NG I   +LSVKY ILHK+GI NWFPSLHASS+ AAL +F
Sbjct: 1401 LTNELLATVLSEGTLSTWPVNG-IPAAALSVKYAILHKIGIGNWFPSLHASSISAALGTF 1460

Query: 243  LYQIGTGDQVDVGSFILSQLLKHVGSFGVKISIPFPLLLSSLLLHQHSGILLVSNAPGLA 302
            LYQI   D+VD G FI +QLL+HVGSFGVK+ I FP L SSLLLH +  +L  S+APG  
Sbjct: 1461 LYQICNDDKVDTGVFIYNQLLRHVGSFGVKVPIAFPRLFSSLLLHLNGVVLTTSDAPGPE 1520

Query: 303  PKTLSLRYRLFQGSHASDLAPFDQPSSGPS--STEHFDIPSTGLLIPSSLASRIFDLLST 362
            PKT++LRYRLFQGSH  D+     P+ GP    T  +D    G  +   LA+RI + L+ 
Sbjct: 1521 PKTIALRYRLFQGSHMPDIDHDVHPTQGPHIFDTTDWDDSPEGFYVNRELATRIINSLTA 1580

Query: 363  ESQVLGNSISILSARRFEVDALLRHLKALFPSNSTQ 397
            ES+ + NSI++LS RR EVDA +RHLK+  PS S Q
Sbjct: 1581 ESRAMTNSITLLSERRLEVDAFIRHLKSSTPSTSRQ 1615

BLAST of PI0027534 vs. ExPASy TrEMBL
Match: A0A1S3CHW3 (uncharacterized protein LOC103501137 OS=Cucumis melo OX=3656 GN=LOC103501137 PE=4 SV=1)

HSP 1 Score: 216.9 bits (551), Expect = 1.6e-52
Identity = 123/225 (54.67%), Postives = 155/225 (68.89%), Query Frame = 0

Query: 174 LSQSSPSPPLSPEVVASELTGGSLRVWPSNGSIFVISLSVKYVILHKVGIANWFPSLHAS 233
           +  SS  P  + EV+A+ L+GG+L  WP NG I V +LSVKY ILHK+GIANWFPS HAS
Sbjct: 70  IDYSSSCP--TTEVLANVLSGGTLSTWPVNG-IPVAALSVKYAILHKIGIANWFPSSHAS 129

Query: 234 SVLAALASFLYQIGTGDQVDVGSFILSQLLKHVGSFGVKISIPFPLLLSSLLLHQHSGIL 293
           S+ AAL +FLYQI   D+VD G+FI +QLL HVGSF VK+ I FP L SSLLLH +  +L
Sbjct: 130 SISAALDTFLYQICNSDKVDTGAFIYNQLLTHVGSFRVKVPIAFPRLFSSLLLHLNGVVL 189

Query: 294 LVSNAPGLAPKTLSLRYRLFQGSHASDLAPFDQPSSGPS--STEHFDIPSTGLLIPSSLA 353
             S+APG  PKT++L YRLFQGSH  D+     P+ GP    T  +D  + G  +   LA
Sbjct: 190 TASDAPGPEPKTIALSYRLFQGSHVPDIDHDVHPTWGPRIFDTTDWDESAEGFYVDRELA 249

Query: 354 SRIFDLLSTESQVLGNSISILSARRFEVDALLRHLKALFPSNSTQ 397
           +RI + L+ ES+ L NSI++LS RR EVDAL+RHLK+  PS S Q
Sbjct: 250 TRIINSLTAESRALTNSITLLSERRLEVDALIRHLKSSAPSTSRQ 291

BLAST of PI0027534 vs. ExPASy TrEMBL
Match: A0A5A7TFV3 (F9C16.13 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold824G00990 PE=4 SV=1)

HSP 1 Score: 214.2 bits (544), Expect = 1.0e-51
Identity = 137/297 (46.13%), Postives = 174/297 (58.59%), Query Frame = 0

Query: 107  LEPVTTKPIPSDSIPFPNAPSSQNVSSSPISEPVFSSIPHVPSSSVPLSKPVCPDEFSIP 166
            L PVT + +PSD       P S +   S  +E VF     +P+   P      P   S  
Sbjct: 1074 LGPVTAERLPSD------PPGSIHSQESSSTEGVF-----IPTPGDPRRSQAIPSGHSPS 1133

Query: 167  SHELRAYLSQSSPS--PPLSPEVVAS---ELTGGSLRVWPSNGSIFVISLSVKYVILHKV 226
             H +R  L  S P   P   PE+  +   + T G+L  WP NG I   +LSVKY ILHK+
Sbjct: 1134 VHPIRLKLPTSQPDAVPAHIPEIATTAREKQTDGTLSTWPMNG-IPATALSVKYAILHKI 1193

Query: 227  GIANWFPSLHASSVLAALASFLYQIGTGDQVDVGSFILSQLLKHVGSFGVKISIPFPLLL 286
            GIANWFPS HASS+ AAL +FLYQI   D+VD G+FI +QLL+HVGSFGVK+ I F  L 
Sbjct: 1194 GIANWFPSSHASSISAALGTFLYQICNSDKVDTGAFIYNQLLRHVGSFGVKVPIAFTRLF 1253

Query: 287  SSLLLHQHSGILLVSNAPGLAPKTLSLRYRLFQGSHASDLAPFDQPSSGPS--STEHFDI 346
            SSLLLH +  +L  SNAP   PKT++L YRLFQGSH +D+     P+ G     T  +D 
Sbjct: 1254 SSLLLHLNGAVLTASNAPRPEPKTITLSYRLFQGSHVTDIDHDMHPTRGLRIFDTTDWDD 1313

Query: 347  PSTGLLIPSSLASRIFDLLSTESQVLGNSISILSARRFEVDALLRHLKALFPSNSTQ 397
             + G  +   LA+RI + L+ ES  L NSI++LS RR E DAL+RH K+  PS S Q
Sbjct: 1314 SAEGFYVDCKLATRIINSLTAESLALTNSITLLSERRLEFDALIRHWKSSAPSTSRQ 1358

BLAST of PI0027534 vs. ExPASy TrEMBL
Match: A0A5D3DQA5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2736G00070 PE=4 SV=1)

HSP 1 Score: 213.8 bits (543), Expect = 1.3e-51
Identity = 126/254 (49.61%), Postives = 166/254 (65.35%), Query Frame = 0

Query: 148 PSSSVPLSKPVCPDEFSIPSHELRAYLSQS-----SPSPPLSPEVVASELTGGSLRVWPS 207
           PSS    S  +   +F + S  +  +L  +     SPS P + EV+A+ L+ G+L  WP 
Sbjct: 41  PSSDDYQSVHIRGFKFVVSSAVINGFLGNTVDIDCSPSCP-TTEVLATVLSRGTLFTWPV 100

Query: 208 NGSIFVISLSVKYVILHKVGIANWFPSLHASSVLAALASFLYQIGTGDQVDVGSFILSQL 267
           NG I   +L+VKY ILHK+GIANWFPS HASS+ AAL +FLYQI   D+VD+G+FI +QL
Sbjct: 101 NG-ILAAALNVKYAILHKIGIANWFPSSHASSISAALRTFLYQICNDDKVDMGAFIYNQL 160

Query: 268 LKHVGSFGVKISIPFPLLLSSLLLHQHSGILLVSNAPGLAPKTLSLRYRLFQGSHASDLA 327
           L+HVGSFG+K+ I F  L SSLLLH +  +L  S+APG  PKT++L YRLFQGSH  D+ 
Sbjct: 161 LRHVGSFGIKVPIAFSRLFSSLLLHLNGAMLTASDAPGPEPKTIALSYRLFQGSHVPDID 220

Query: 328 PFDQPSSGPS--STEHFDIPSTGLLIPSSLASRIFDLLSTESQVLGNSISILSARRFEVD 387
               P+ GP    T  +D    G  +   LA+RI + L+ ES  L NSI++LS R+ EVD
Sbjct: 221 HGVHPTRGPRIFDTTDWDDSIEGFYVDCELATRIINFLTAESHALTNSITLLSERQLEVD 280

Query: 388 ALLRHLKALFPSNS 395
           AL+RHLK+L PS S
Sbjct: 281 ALIRHLKSLTPSTS 292

BLAST of PI0027534 vs. ExPASy TrEMBL
Match: A0A1S3CPM5 (uncharacterized protein LOC103503245 OS=Cucumis melo OX=3656 GN=LOC103503245 PE=4 SV=1)

HSP 1 Score: 213.8 bits (543), Expect = 1.3e-51
Identity = 126/254 (49.61%), Postives = 166/254 (65.35%), Query Frame = 0

Query: 148 PSSSVPLSKPVCPDEFSIPSHELRAYLSQS-----SPSPPLSPEVVASELTGGSLRVWPS 207
           PSS    S  +   +F + S  +  +L  +     SPS P + EV+A+ L+ G+L  WP 
Sbjct: 38  PSSDDYQSVHIRGFKFVVSSAVINGFLGNTVDIDCSPSCP-TTEVLATVLSRGTLFTWPV 97

Query: 208 NGSIFVISLSVKYVILHKVGIANWFPSLHASSVLAALASFLYQIGTGDQVDVGSFILSQL 267
           NG I   +L+VKY ILHK+GIANWFPS HASS+ AAL +FLYQI   D+VD+G+FI +QL
Sbjct: 98  NG-ILAAALNVKYAILHKIGIANWFPSSHASSISAALRTFLYQICNDDKVDMGAFIYNQL 157

Query: 268 LKHVGSFGVKISIPFPLLLSSLLLHQHSGILLVSNAPGLAPKTLSLRYRLFQGSHASDLA 327
           L+HVGSFG+K+ I F  L SSLLLH +  +L  S+APG  PKT++L YRLFQGSH  D+ 
Sbjct: 158 LRHVGSFGIKVPIAFSRLFSSLLLHLNGAMLTASDAPGPEPKTIALSYRLFQGSHVPDID 217

Query: 328 PFDQPSSGPS--STEHFDIPSTGLLIPSSLASRIFDLLSTESQVLGNSISILSARRFEVD 387
               P+ GP    T  +D    G  +   LA+RI + L+ ES  L NSI++LS R+ EVD
Sbjct: 218 HGVHPTRGPRIFDTTDWDDSIEGFYVDCELATRIINFLTAESHALTNSITLLSERQLEVD 277

Query: 388 ALLRHLKALFPSNS 395
           AL+RHLK+L PS S
Sbjct: 278 ALIRHLKSLTPSTS 289

BLAST of PI0027534 vs. NCBI nr
Match: KAA0035966.1 (F5J5.1 [Cucumis melo var. makuwa])

HSP 1 Score: 216.9 bits (551), Expect = 3.2e-52
Identity = 118/216 (54.63%), Postives = 150/216 (69.44%), Query Frame = 0

Query: 183  LSPEVVASELTGGSLRVWPSNGSIFVISLSVKYVILHKVGIANWFPSLHASSVLAALASF 242
            L+ E++A+ L+ G+L  WP NG I   +LSVKY ILHK+GI NWFPSLHASS+ AAL +F
Sbjct: 1401 LTNELLATVLSEGTLSTWPVNG-IPAAALSVKYAILHKIGIGNWFPSLHASSISAALGTF 1460

Query: 243  LYQIGTGDQVDVGSFILSQLLKHVGSFGVKISIPFPLLLSSLLLHQHSGILLVSNAPGLA 302
            LYQI   D+VD G FI +QLL+HVGSFGVK+ I FP L SSLLLH +  +L  S+APG  
Sbjct: 1461 LYQICNDDKVDTGVFIYNQLLRHVGSFGVKVPIAFPRLFSSLLLHLNGVVLTTSDAPGPE 1520

Query: 303  PKTLSLRYRLFQGSHASDLAPFDQPSSGPS--STEHFDIPSTGLLIPSSLASRIFDLLST 362
            PKT++LRYRLFQGSH  D+     P+ GP    T  +D    G  +   LA+RI + L+ 
Sbjct: 1521 PKTIALRYRLFQGSHMPDIDHDVHPTQGPHIFDTTDWDDSPEGFYVNRELATRIINSLTA 1580

Query: 363  ESQVLGNSISILSARRFEVDALLRHLKALFPSNSTQ 397
            ES+ + NSI++LS RR EVDA +RHLK+  PS S Q
Sbjct: 1581 ESRAMTNSITLLSERRLEVDAFIRHLKSSTPSTSRQ 1615

BLAST of PI0027534 vs. NCBI nr
Match: XP_008462856.1 (PREDICTED: uncharacterized protein LOC103501137 [Cucumis melo])

HSP 1 Score: 216.9 bits (551), Expect = 3.2e-52
Identity = 123/225 (54.67%), Postives = 155/225 (68.89%), Query Frame = 0

Query: 174 LSQSSPSPPLSPEVVASELTGGSLRVWPSNGSIFVISLSVKYVILHKVGIANWFPSLHAS 233
           +  SS  P  + EV+A+ L+GG+L  WP NG I V +LSVKY ILHK+GIANWFPS HAS
Sbjct: 70  IDYSSSCP--TTEVLANVLSGGTLSTWPVNG-IPVAALSVKYAILHKIGIANWFPSSHAS 129

Query: 234 SVLAALASFLYQIGTGDQVDVGSFILSQLLKHVGSFGVKISIPFPLLLSSLLLHQHSGIL 293
           S+ AAL +FLYQI   D+VD G+FI +QLL HVGSF VK+ I FP L SSLLLH +  +L
Sbjct: 130 SISAALDTFLYQICNSDKVDTGAFIYNQLLTHVGSFRVKVPIAFPRLFSSLLLHLNGVVL 189

Query: 294 LVSNAPGLAPKTLSLRYRLFQGSHASDLAPFDQPSSGPS--STEHFDIPSTGLLIPSSLA 353
             S+APG  PKT++L YRLFQGSH  D+     P+ GP    T  +D  + G  +   LA
Sbjct: 190 TASDAPGPEPKTIALSYRLFQGSHVPDIDHDVHPTWGPRIFDTTDWDESAEGFYVDRELA 249

Query: 354 SRIFDLLSTESQVLGNSISILSARRFEVDALLRHLKALFPSNSTQ 397
           +RI + L+ ES+ L NSI++LS RR EVDAL+RHLK+  PS S Q
Sbjct: 250 TRIINSLTAESRALTNSITLLSERRLEVDALIRHLKSSAPSTSRQ 291

BLAST of PI0027534 vs. NCBI nr
Match: KAA0042302.1 (F9C16.13 [Cucumis melo var. makuwa])

HSP 1 Score: 214.2 bits (544), Expect = 2.1e-51
Identity = 137/297 (46.13%), Postives = 174/297 (58.59%), Query Frame = 0

Query: 107  LEPVTTKPIPSDSIPFPNAPSSQNVSSSPISEPVFSSIPHVPSSSVPLSKPVCPDEFSIP 166
            L PVT + +PSD       P S +   S  +E VF     +P+   P      P   S  
Sbjct: 1074 LGPVTAERLPSD------PPGSIHSQESSSTEGVF-----IPTPGDPRRSQAIPSGHSPS 1133

Query: 167  SHELRAYLSQSSPS--PPLSPEVVAS---ELTGGSLRVWPSNGSIFVISLSVKYVILHKV 226
             H +R  L  S P   P   PE+  +   + T G+L  WP NG I   +LSVKY ILHK+
Sbjct: 1134 VHPIRLKLPTSQPDAVPAHIPEIATTAREKQTDGTLSTWPMNG-IPATALSVKYAILHKI 1193

Query: 227  GIANWFPSLHASSVLAALASFLYQIGTGDQVDVGSFILSQLLKHVGSFGVKISIPFPLLL 286
            GIANWFPS HASS+ AAL +FLYQI   D+VD G+FI +QLL+HVGSFGVK+ I F  L 
Sbjct: 1194 GIANWFPSSHASSISAALGTFLYQICNSDKVDTGAFIYNQLLRHVGSFGVKVPIAFTRLF 1253

Query: 287  SSLLLHQHSGILLVSNAPGLAPKTLSLRYRLFQGSHASDLAPFDQPSSGPS--STEHFDI 346
            SSLLLH +  +L  SNAP   PKT++L YRLFQGSH +D+     P+ G     T  +D 
Sbjct: 1254 SSLLLHLNGAVLTASNAPRPEPKTITLSYRLFQGSHVTDIDHDMHPTRGLRIFDTTDWDD 1313

Query: 347  PSTGLLIPSSLASRIFDLLSTESQVLGNSISILSARRFEVDALLRHLKALFPSNSTQ 397
             + G  +   LA+RI + L+ ES  L NSI++LS RR E DAL+RH K+  PS S Q
Sbjct: 1314 SAEGFYVDCKLATRIINSLTAESLALTNSITLLSERRLEFDALIRHWKSSAPSTSRQ 1358

BLAST of PI0027534 vs. NCBI nr
Match: TYK25712.1 (uncharacterized protein E5676_scaffold2736G00070 [Cucumis melo var. makuwa])

HSP 1 Score: 213.8 bits (543), Expect = 2.7e-51
Identity = 126/254 (49.61%), Postives = 166/254 (65.35%), Query Frame = 0

Query: 148 PSSSVPLSKPVCPDEFSIPSHELRAYLSQS-----SPSPPLSPEVVASELTGGSLRVWPS 207
           PSS    S  +   +F + S  +  +L  +     SPS P + EV+A+ L+ G+L  WP 
Sbjct: 41  PSSDDYQSVHIRGFKFVVSSAVINGFLGNTVDIDCSPSCP-TTEVLATVLSRGTLFTWPV 100

Query: 208 NGSIFVISLSVKYVILHKVGIANWFPSLHASSVLAALASFLYQIGTGDQVDVGSFILSQL 267
           NG I   +L+VKY ILHK+GIANWFPS HASS+ AAL +FLYQI   D+VD+G+FI +QL
Sbjct: 101 NG-ILAAALNVKYAILHKIGIANWFPSSHASSISAALRTFLYQICNDDKVDMGAFIYNQL 160

Query: 268 LKHVGSFGVKISIPFPLLLSSLLLHQHSGILLVSNAPGLAPKTLSLRYRLFQGSHASDLA 327
           L+HVGSFG+K+ I F  L SSLLLH +  +L  S+APG  PKT++L YRLFQGSH  D+ 
Sbjct: 161 LRHVGSFGIKVPIAFSRLFSSLLLHLNGAMLTASDAPGPEPKTIALSYRLFQGSHVPDID 220

Query: 328 PFDQPSSGPS--STEHFDIPSTGLLIPSSLASRIFDLLSTESQVLGNSISILSARRFEVD 387
               P+ GP    T  +D    G  +   LA+RI + L+ ES  L NSI++LS R+ EVD
Sbjct: 221 HGVHPTRGPRIFDTTDWDDSIEGFYVDCELATRIINFLTAESHALTNSITLLSERQLEVD 280

Query: 388 ALLRHLKALFPSNS 395
           AL+RHLK+L PS S
Sbjct: 281 ALIRHLKSLTPSTS 292

BLAST of PI0027534 vs. NCBI nr
Match: XP_008465605.1 (PREDICTED: uncharacterized protein LOC103503245 [Cucumis melo])

HSP 1 Score: 213.8 bits (543), Expect = 2.7e-51
Identity = 126/254 (49.61%), Postives = 166/254 (65.35%), Query Frame = 0

Query: 148 PSSSVPLSKPVCPDEFSIPSHELRAYLSQS-----SPSPPLSPEVVASELTGGSLRVWPS 207
           PSS    S  +   +F + S  +  +L  +     SPS P + EV+A+ L+ G+L  WP 
Sbjct: 38  PSSDDYQSVHIRGFKFVVSSAVINGFLGNTVDIDCSPSCP-TTEVLATVLSRGTLFTWPV 97

Query: 208 NGSIFVISLSVKYVILHKVGIANWFPSLHASSVLAALASFLYQIGTGDQVDVGSFILSQL 267
           NG I   +L+VKY ILHK+GIANWFPS HASS+ AAL +FLYQI   D+VD+G+FI +QL
Sbjct: 98  NG-ILAAALNVKYAILHKIGIANWFPSSHASSISAALRTFLYQICNDDKVDMGAFIYNQL 157

Query: 268 LKHVGSFGVKISIPFPLLLSSLLLHQHSGILLVSNAPGLAPKTLSLRYRLFQGSHASDLA 327
           L+HVGSFG+K+ I F  L SSLLLH +  +L  S+APG  PKT++L YRLFQGSH  D+ 
Sbjct: 158 LRHVGSFGIKVPIAFSRLFSSLLLHLNGAMLTASDAPGPEPKTIALSYRLFQGSHVPDID 217

Query: 328 PFDQPSSGPS--STEHFDIPSTGLLIPSSLASRIFDLLSTESQVLGNSISILSARRFEVD 387
               P+ GP    T  +D    G  +   LA+RI + L+ ES  L NSI++LS R+ EVD
Sbjct: 218 HGVHPTRGPRIFDTTDWDDSIEGFYVDCELATRIINFLTAESHALTNSITLLSERQLEVD 277

Query: 388 ALLRHLKALFPSNS 395
           AL+RHLK+L PS S
Sbjct: 278 ALIRHLKSLTPSTS 289

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5A7T1691.6e-5254.63F5J5.1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold56G001730 PE=4 SV... [more]
A0A1S3CHW31.6e-5254.67uncharacterized protein LOC103501137 OS=Cucumis melo OX=3656 GN=LOC103501137 PE=... [more]
A0A5A7TFV31.0e-5146.13F9C16.13 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold824G00990 PE=4 ... [more]
A0A5D3DQA51.3e-5149.61Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A1S3CPM51.3e-5149.61uncharacterized protein LOC103503245 OS=Cucumis melo OX=3656 GN=LOC103503245 PE=... [more]
Match NameE-valueIdentityDescription
KAA0035966.13.2e-5254.63F5J5.1 [Cucumis melo var. makuwa][more]
XP_008462856.13.2e-5254.67PREDICTED: uncharacterized protein LOC103501137 [Cucumis melo][more]
KAA0042302.12.1e-5146.13F9C16.13 [Cucumis melo var. makuwa][more]
TYK25712.12.7e-5149.61uncharacterized protein E5676_scaffold2736G00070 [Cucumis melo var. makuwa][more]
XP_008465605.12.7e-5149.61PREDICTED: uncharacterized protein LOC103503245 [Cucumis melo][more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 69..101
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 122..137
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 43..137
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 54..68

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
PI0027534.1PI0027534.1mRNA