PI0027458 (gene) Melon (PI 482460) v1

Overview
NamePI0027458
Typegene
OrganismCucumis metuliferus (Melon (PI 482460) v1)
DescriptionUnknown protein
Locationchr02: 20759577 .. 20759911 (+)
RNA-Seq ExpressionPI0027458
SyntenyPI0027458
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTGTGTTCTCCGGAGTAGAGATACCGGTGGTAACTTTCGCAACATCAAGGGCAGAAGCTTCCGGCTTCTTCTTAGTGTAGAGGACGAAATAACCTAACGTGGCAGCGATGGCGAAACCGCCGATCGCCATTCTCATCGGACAAACAGGAAGCTTCTTGCGCTGGTGAAGAACCTCAGTGGTGTGATGAGCCGGAGATGGGCCCTTCATTCTGTCAGCGGTGGCATTTACTTGCTGTGATCCTGTCATTGCTGATGCTCTGTTCTTCCTCTGTTTTTGGATTTTCTTGTGAGAAGTGTGTGGTATTGAAATTGGTTTGGGGGATTTGGAATTAA

mRNA sequence

ATGTGTGTTCTCCGGAGTAGAGATACCGGTGGTAACTTTCGCAACATCAAGGGCAGAAGCTTCCGGCTTCTTCTTAGTGAAGCTTCTTGCGCTGGTGAAGAACCTCAGTGGTGTGATGAGCCGGAGATGGGCCCTTCATTCTGTCAGCGGTGGCATTTACTTGCTGTGATCCTGTCATTGCTGATGCTCTGTTCTTCCTCTGTTTTTGGATTTTCTTGTGAGAAGTGTGTGGTATTGAAATTGGTTTGGGGGATTTGGAATTAA

Coding sequence (CDS)

ATGTGTGTTCTCCGGAGTAGAGATACCGGTGGTAACTTTCGCAACATCAAGGGCAGAAGCTTCCGGCTTCTTCTTAGTGAAGCTTCTTGCGCTGGTGAAGAACCTCAGTGGTGTGATGAGCCGGAGATGGGCCCTTCATTCTGTCAGCGGTGGCATTTACTTGCTGTGATCCTGTCATTGCTGATGCTCTGTTCTTCCTCTGTTTTTGGATTTTCTTGTGAGAAGTGTGTGGTATTGAAATTGGTTTGGGGGATTTGGAATTAA

Protein sequence

MCVLRSRDTGGNFRNIKGRSFRLLLSEASCAGEEPQWCDEPEMGPSFCQRWHLLAVILSLLMLCSSSVFGFSCEKCVVLKLVWGIWN
Homology
[Close]
BLAST of PI0027458 vs. ExPASy TrEMBL
Match: A0A0A0LW11 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G256730 PE=4 SV=1)

HSP 1 Score: 123.6 bits (309), Expect = 4.0e-25
Identity = 62/82 (75.61%), Postives = 65/82 (79.27%), Query Frame = 0 

Query: 1  MCVLRSRDTGGNFRNIKGRSFRLLLS----------EASCAGEEPQWCDEPEMGPSFCQR 60
          MCV+ SRDT GNF NIK RSFRL+LS          EASCAGEEPQWC EPEMG SFC+R
Sbjct: 1  MCVVGSRDTRGNFGNIKSRSFRLILSSQSPFSLDKQEASCAGEEPQWCAEPEMGRSFCRR 60

Query: 61 WHLLAVILSLLMLCSSSVFGFS 73
          WHLLAVILSL MLCSSSVFGFS
Sbjct: 61 WHLLAVILSLPMLCSSSVFGFS 82

[Close]
BLAST of PI0027458 vs. NCBI nr
Match: KGN65164.1 (hypothetical protein Csa_019648 [Cucumis sativus])

HSP 1 Score: 123.6 bits (309), Expect = 8.2e-25
Identity = 62/82 (75.61%), Postives = 65/82 (79.27%), Query Frame = 0 

Query: 1  MCVLRSRDTGGNFRNIKGRSFRLLLS----------EASCAGEEPQWCDEPEMGPSFCQR 60
          MCV+ SRDT GNF NIK RSFRL+LS          EASCAGEEPQWC EPEMG SFC+R
Sbjct: 1  MCVVGSRDTRGNFGNIKSRSFRLILSSQSPFSLDKQEASCAGEEPQWCAEPEMGRSFCRR 60

Query: 61 WHLLAVILSLLMLCSSSVFGFS 73
          WHLLAVILSL MLCSSSVFGFS
Sbjct: 61 WHLLAVILSLPMLCSSSVFGFS 82

The following BLAST results are available for this feature:
BLAST of PI0027458 vs.
Match NameE-valueIdentityDescription
BLAST of PI0027458 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LW114.0e-2575.61Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G256730 PE=4 SV=1[more]
BLAST of PI0027458 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN65164.18.2e-2575.61hypothetical protein Csa_019648 [Cucumis sativus][more]
BLAST of PI0027458 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
PI0027458.1PI0027458.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane