PI0027413 (gene) Melon (PI 482460) v1

Overview
NamePI0027413
Typegene
OrganismCucumis metuliferus (Melon (PI 482460) v1)
Descriptionprotein WHAT'S THIS FACTOR 1
Locationchr07: 2772912 .. 2777741 (-)
RNA-Seq ExpressionPI0027413
SyntenyPI0027413
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CGTTCTTCGCAGCTTTCAACAGGTTCGTCGATGTTCATTATCTTCTACATTACTTCTCATTTACAATCTTACGCTATAATACTTTGCGTTTTAAACTTTGTTTAGGGTGCGGATTCGTGAGACTATATGCATGCCATGCCACTAAATTGAATCAATTCCTCTTGTAGCTGTGTCTAAAATCATTTACGACGTTAGATTTATGTTAGGAGATGGATACTAAAAGTGGGTTTGTTTCACTTTTTTTTCTTCTTTTAATTAATTGCTGTGCTTGCCTGAGAGGTGTTTGATGATTGGATCGAGAATAATGGTGTTAGTGCTTGAGGAAATTGGCGTTTGGTCTTGTGAACGGTGCAGAATAGGAAGTGGGTTTGCATTATATTTACGTTTATAGTGAAGGACATCGATTGCTGTGGTTGGGATTTGCTAATTTGCTCTCGTGGTTTAATCTAATCCCAGGGAAAAGGGCAAAAGAAAACGAGATAAAATGGAGTAACGATTTGATCACTGAACTTTTCTGAGGTCAACACTTTTACTTTGTTCTATGGTTTACTCTTATTACCCATGTAACTGAAAATAAGTTTTTTAAGAGAAGGATATCTGAAGAGATTTCCTCCTCATATCATACTCTTTAAAAACCTGAAATTTACAGTCATAAGAAGAATCTGTAGACAAAAAGAAGTCTTGGTTTTACTATTTTCTAGTTTACTCTCTCCCATGACCGCAGACAATTTTCTTTCACTTATTTTCCATATAGTTCATTATGAATTCAAGAAGATGAAAAATTTTGGCATTCTATTGTGAATATTCTGCTTTTGTTTATTTACATTTCAGTATTTTACTATCGAAATGATTTTCTGGACTCTATTGCACGTTGTTACTTATTCTATTCAGAATTTTCACTTTGTACAAGTCAAGAAAGTATAAATACCATGGGACCATAACTGTACTGAAATATTTAACTGCATAAATGCAATTTATGCACTGCAGGTGGTATAGAACCTGAAGATAATTGCTTGCAGTTTAATCTGTTGATGCCAGACAGTAGCTTCCCCCATCTGATGCTCTGAGTCAGAGTTGGAAGAAGGATATGTATCATCTTCTTTAGATTAATTTGATGAATCTGTTTACCTATTGTAATCTAAAAGGCCTTCCATTTATACAAAACTGAAAAATGGCTTTATCTTCTCATTTCTTGACCCCTACGGACTGGCATGTAACATCCCTTAGTTCAAACCTCCTCAGCGGCAGTCCATTGTGGTTGCATTCCAAAGTCGACTTCAAGTGTCAAAGAAAAGAAAATTTCAGAACTCATTATACTTTGACTCCTTGTTCCTCTATCAAGATTGTTCGTAGTCGTTCGTTAGATCGGCATGCTGTAAAACATAACAAAACTCGATTTGTGCAAAAGCTGATAATCTTACTGCTATCTAAACCAAAGCATTATATACCACTACACATTCTTTCCAAATGCCGTGGCTATCTTTCCCTTCCCAGACCCCGCTCTCTCCTTTCAATGATTCATCGTTATCCTTCCATTTTTGAACTTTTTTCAATCCCTTATCCACCCACACCACTCAATGCAACAAAGCTTTACCCTCAACTTTGTGTTCGTCTAACCCCAGCAGCAGCATCTATTGCTAAACAGGACTCTGATCTCAAATTGGTAATCTCTAACACATTGGCTGAAAAGCTCCAGAAATTACTTATGCTTTCTTCACACCACAGGATTCTTTTATCAAAGCTGGTTCACCTTGCTCCTGATCTAAGCATGCCCCCAAATTTTAGGTCCCGTCTCTGTAATGATTATCCAGAAAAATTTAGGACTGTTGATACCTCATATGGCCGTGCACTGGAGCTTGTCTCCTGGGACCCCGAGTTGGCAAAGCCTTTACCTTACATACAAGTGCCTTCACGTGAGCTAATAGTGGATAGACCATTAAAATTCAACTTGTTGAGACTAAGAAAGGGGCTGAATTTGAAAAGAACCCACCAGGAATTTCTAATTAAGTTCAGGGATTTGCCAGATGTTTGCCCTTACAAAACTCCAGCGAGTGAGTTGGCCAAGGAGTCTCTCGAGTCAGAGAAACGAGCTTGTGCTGTGGTGCGAGAGGTATTGGGGATGATGATTGAGAAGAGGACTTTAATAGACCACTTGACACATTTCAGAAAAGATTTTGGGCTACCAAATAAACTGAGAGGAATGATTGTGAGGCATCCGGAGTTATTTTATGTGAGTTTGAAGGGTCAGAGAGACTCTGTATTCCTTGTGGAAGGATTTGACGATAAGGGTGTTCTTTTGGAGAAGGATGAGACTTTGGCAATCAAAAATCAATGGATGACGCTTTTGAAGGAAGGTAAAAGGATGAGACGGGAGAAGAAGAAGGCTCAAATATATGACAGTAAATATGGAAATGATCATGCAAACGATAATCATGATCATGAGATGGAAAGTGACTATGATGACGATTACGACGATGGTTTTGAGAGTTTATTTCAGTATGAGGATTTAGATTTTGAAGATGAGAACAGTGGTCTGCCAAGCATTTGGTCGAATGGAGACTTTTGGACTACAAGTAACGTAGCTATTAGTAATGATGCAGATGGGGGTCACATAGAACCTTGGTGATGGTTACTTTAATTTGTTTGGAAGGTTCATCAAAATATTTCTATAATTAATGAAAACAAAGGGCGTCTTCAGAATTCAGAAAAAGAACTTTGTGAATACTGAATATAAAGATTGTCCTGGAAAGCTTGAAAAACGCTTTAAGTGAAGCCTGATGATCTATAGGAAGGGCTGAAGCTACTGCCTCTAGTCTCATCTATTTGTGCATGGGCAATTAATCCTCTGCTGATATACCATTATACCTTCTCAAGCTGTATAATTCAAACCTGCTTGACCTGTTCTTTTGTCCCCTCAAAATGTACAATTAGTGCTAGACCTTTCTATGAAGTATAGACGAAACTTCTCCCTAATCAAGAGGGATGGCTGAGATATAAGTCCTAACTCCTACTTATGTATACCATTAGATAAATTAAGAAAACAAATTCATGTTAATGAATAATGTAAATATTCGGGTATAGTTTGGTAGCTCATTCTTCCCCGTGGTCTCTTGCTGTGAATGTATTCAGAATTTGCTCCCCCACTGGTAAATTGTCATTTCTTGTTTCTCATTTTAAGAAACAAGAAACAATAAACAATTATCAAACTTTTTTTTAGAAAACCGAAAACATGGAATAAGAAACAGGATTCTCACCAACTAAGCCTTGCAACTTCTAACGGTTGCTTGGTCTACAAGTAGCTCATTTTTGTTCTATGATGCATGCATATTATGTATTTGGCGGAGCATTATGGATGGATCCTTCTAGCTTTGGTTGTATCCTTAGTATATGCTCCTAAATTAATGAATTGGCTTCTGATGACTACACAGTAACAGATATTCTGTGTGGACAGATACGGGTCAAACATTTTTATCCATTCTTTGATGTGTTACACCTTAAACGTTTTGCATGTATCCGTATTTTTCAGTTCTATGCCTAATATATTAATGGTATGCTTATCTTTACTGCTCTTTCCTGAGATATGTCTAGCTTTTTATGCACAGAAGCATTGTTTATGATATTTAGTTTACTTTCCAGTTTTGATACAGAAAAATAGAAAACACATCGGTGTTGCTAGACATCTTCACTGACCAGACTTTGTTTCTTCTTGATGTTTGTTGGACTATAGTTGTTTGATGAACACACATCAATTATTACAACTCAAAGCCTTTGTTATCTAAAAAGACACACCCACGCCATCTTTCAATCAGCAGAAAGCATACTTGAAATGTGCATATAATGATCTTCGTGCTCCGTGCAGTTGATATGCATGCATTTGTGCTAATCATTTGTGTTCATTGTTTACTCTGCTGACTTCGTGGTAACTTTTTTAGAGGGTTAAATAGTGTTTTAGTCATTCAAATTACTTTTCAAAATCTTAATGGTGATAAGTTATTAGTCAAAATTTATTATGAAGCATGTAAAAACACTTTAAGTATTTTCTCAAAAGTAAATGTAAGAAAAGTATTTCACTTTAAAGTACTGCTTTTAAAAGTCACCTTAAGTTATTTTCATTGTGAAAACAAGACTGTACTAGATATGTGCAATCATGTGCTCTGTGTTTTGTGCTCTGTGTAATTGATATGCATGCATTTGTGTTCATTATTTCTGCTGAATGTGTATCTTCCGATTGTCTAGGGAAAGTTGATGTTGTCTTAAAAACTCAGAAAGGCTATATTCTTTAAGCTTATGTGGAGGTACATATTCTGTCACTAGCAATCTGATTTATTCTGAAAAGGCCAACAAAGCATGGAGAAAATTTCTATTACTAAGTTATCTCGAATTATGTGTCTCATGAATTAATAATATATCATCTAATCACTTATCAAATGCTATGGAAAAAGCATGAAACAGTGCAGTTCTTGACATTTTCCCAAAGCATGTGCGTAGACACCATGAGGCGAGTTCGTGCCATGTAGATGAAAACAAAGGAATTGATGAACTATGGAAGCACCAGCATAATGACCGTATTGGTTTTAGTTTTCAAATGTTCTTATCAATCATTGCTTTGAATCTTTTCTCTAAGCATGCATTAGACTTGAAATTACTCGATTACATCTCCTACTACATTTTTTTAATTCAGGTATGTTTAGAGCCTTAACCTTAGTTGAAGAGGCAAAAGAAGTTTCCTTAATCAAACTCAACCTTTTTGTTGGAAATGATAACCTTTTGGTGAATCTTCCAATAAAAAGTGGTACATAGCATATGCATCAAATTTACAGTGAACAAAAA

mRNA sequence

CGTTCTTCGCAGCTTTCAACAGGTTCGTCGATGTTCATTATCTTCTACATTACTTCTCATTTACAATCTTACGCTATAATACTTTGCGTTTTAAACTTTGTTTAGGGTGCGGATTCGTGAGACTATATGCATGCCATGCCACTAAATTGAATCAATTCCTCTTGTAGCTGTGTCTAAAATCATTTACGACGTTAGATTTATGTTAGGAGATGGATACTAAAAGTGGGTTTGTTTCACTTTTTTTTCTTCTTTTAATTAATTGCTGTGCTTGCCTGAGAGGTGTTTGATGATTGGATCGAGAATAATGGTGTTAGTGCTTGAGGAAATTGGCGTTTGGTCTTGTGAACGGTGCAGAATAGGAAGTGGGTTTGCATTATATTTACGTTTATAGTGAAGGACATCGATTGCTGTGGTTGGGATTTGCTAATTTGCTCTCGTGGTTTAATCTAATCCCAGGGAAAAGGGCAAAAGAAAACGAGATAAAATGGAGTAACGATTTGATCACTGAACTTTTCTGAGGTGGTATAGAACCTGAAGATAATTGCTTGCAGTTTAATCTGTTGATGCCAGACAGTAGCTTCCCCCATCTGATGCTCTGAGTCAGAGTTGGAAGAAGGATATGTATCATCTTCTTTAGATTAATTTGATGAATCTGTTTACCTATTGTAATCTAAAAGGCCTTCCATTTATACAAAACTGAAAAATGGCTTTATCTTCTCATTTCTTGACCCCTACGGACTGGCATGTAACATCCCTTAGTTCAAACCTCCTCAGCGGCAGTCCATTGTGGTTGCATTCCAAAGTCGACTTCAAGTGTCAAAGAAAAGAAAATTTCAGAACTCATTATACTTTGACTCCTTGTTCCTCTATCAAGATTGTTCGTAGTCGTTCGTTAGATCGGCATGCTGTAAAACATAACAAAACTCGATTTGTGCAAAAGCTGATAATCTTACTGCTATCTAAACCAAAGCATTATATACCACTACACATTCTTTCCAAATGCCGTGGCTATCTTTCCCTTCCCAGACCCCGCTCTCTCCTTTCAATGATTCATCGTTATCCTTCCATTTTTGAACTTTTTTCAATCCCTTATCCACCCACACCACTCAATGCAACAAAGCTTTACCCTCAACTTTGTGTTCGTCTAACCCCAGCAGCAGCATCTATTGCTAAACAGGACTCTGATCTCAAATTGGTAATCTCTAACACATTGGCTGAAAAGCTCCAGAAATTACTTATGCTTTCTTCACACCACAGGATTCTTTTATCAAAGCTGGTTCACCTTGCTCCTGATCTAAGCATGCCCCCAAATTTTAGGTCCCGTCTCTGTAATGATTATCCAGAAAAATTTAGGACTGTTGATACCTCATATGGCCGTGCACTGGAGCTTGTCTCCTGGGACCCCGAGTTGGCAAAGCCTTTACCTTACATACAAGTGCCTTCACGTGAGCTAATAGTGGATAGACCATTAAAATTCAACTTGTTGAGACTAAGAAAGGGGCTGAATTTGAAAAGAACCCACCAGGAATTTCTAATTAAGTTCAGGGATTTGCCAGATGTTTGCCCTTACAAAACTCCAGCGAGTGAGTTGGCCAAGGAGTCTCTCGAGTCAGAGAAACGAGCTTGTGCTGTGGTGCGAGAGGTATTGGGGATGATGATTGAGAAGAGGACTTTAATAGACCACTTGACACATTTCAGAAAAGATTTTGGGCTACCAAATAAACTGAGAGGAATGATTGTGAGGCATCCGGAGTTATTTTATGTGAGTTTGAAGGGTCAGAGAGACTCTGTATTCCTTGTGGAAGGATTTGACGATAAGGGTGTTCTTTTGGAGAAGGATGAGACTTTGGCAATCAAAAATCAATGGATGACGCTTTTGAAGGAAGGTAAAAGGATGAGACGGGAGAAGAAGAAGGCTCAAATATATGACAGTAAATATGGAAATGATCATGCAAACGATAATCATGATCATGAGATGGAAAGTGACTATGATGACGATTACGACGATGGTTTTGAGAGTTTATTTCAGTATGAGGATTTAGATTTTGAAGATGAGAACAGTGGTCTGCCAAGCATTTGGTCGAATGGAGACTTTTGGACTACAAGTAACGTAGCTATTAGTAATGATGCAGATGGGGGTCACATAGAACCTTGGTGATGGTTACTTTAATTTGTTTGGAAGGTTCATCAAAATATTTCTATAATTAATGAAAACAAAGGGCGTCTTCAGAATTCAGAAAAAGAACTTTGTGAATACTGAATATAAAGATTGTCCTGGAAAGCTTGAAAAACGCTTTAAGTGAAGCCTGATGATCTATAGGAAGGGCTGAAGCTACTGCCTCTAGTCTCATCTATTTGTGCATGGGCAATTAATCCTCTGCTGATATACCATTATACCTTCTCAAGCTGTATAATTCAAACCTGCTTGACCTGTTCTTTTGTCCCCTCAAAATGTACAATTAGTGCTAGACCTTTCTATGAAGTATAGACGAAACTTCTCCCTAATCAAGAGGGATGGCTGAGATATAAGTCCTAACTCCTACTTATGTATACCATTAGATAAATTAAGAAAACAAATTCATGTTAATGAATAATGTAAATATTCGGGTATAGTTTGGTAGCTCATTCTTCCCCGTGGTCTCTTGCTGTGAATGTATTCAGAATTTGCTCCCCCACTGGTAAATTGTCATTTCTTGTTTCTCATTTTAAGAAACAAGAAACAATAAACAATTATCAAACTTTTTTTTAGAAAACCGAAAACATGGAATAAGAAACAGGATTCTCACCAACTAAGCCTTGCAACTTCTAACGGTTGCTTGGTCTACAAGTAGCTCATTTTTGTTCTATGATGCATGCATATTATGTATTTGGCGGAGCATTATGGATGGATCCTTCTAGCTTTGGTTGTATCCTTAGTATATGCTCCTAAATTAATGAATTGGCTTCTGATGACTACACAGTAACAGATATTCTGTGTGGACAGATACGGGTCAAACATTTTTATCCATTCTTTGATGTGTTACACCTTAAACGTTTTGCATGTATCCGTATTTTTCAGTTCTATGCCTAATATATTAATGGTATGCTTATCTTTACTGCTCTTTCCTGAGATATGTCTAGCTTTTTATGCACAGAAGCATTGTTTATGATATTTAGTTTACTTTCCAGTTTTGATACAGAAAAATAGAAAACACATCGGTGTTGCTAGACATCTTCACTGACCAGACTTTGTTTCTTCTTGATGTTTGTTGGACTATAGTTGTTTGATGAACACACATCAATTATTACAACTCAAAGCCTTTGTTATCTAAAAAGACACACCCACGCCATCTTTCAATCAGCAGAAAGCATACTTGAAATGTGCATATAATGATCTTCGTGCTCCGTGCAGTTGATATGCATGCATTTGTGCTAATCATTTGTGTTCATTGTTTACTCTGCTGACTTCGTGGTAACTTTTTTAGAGGGTTAAATAGTGTTTTAGTCATTCAAATTACTTTTCAAAATCTTAATGGTGATAAGTTATTAGTCAAAATTTATTATGAAGCATGTAAAAACACTTTAAGTATTTTCTCAAAAGTAAATGTAAGAAAAGTATTTCACTTTAAAGTACTGCTTTTAAAAGTCACCTTAAGTTATTTTCATTGTGAAAACAAGACTGTACTAGATATGTGCAATCATGTGCTCTGTGTTTTGTGCTCTGTGTAATTGATATGCATGCATTTGTGTTCATTATTTCTGCTGAATGTGTATCTTCCGATTGTCTAGGGAAAGTTGATGTTGTCTTAAAAACTCAGAAAGGCTATATTCTTTAAGCTTATGTGGAGGTACATATTCTGTCACTAGCAATCTGATTTATTCTGAAAAGGCCAACAAAGCATGGAGAAAATTTCTATTACTAAGTTATCTCGAATTATGTGTCTCATGAATTAATAATATATCATCTAATCACTTATCAAATGCTATGGAAAAAGCATGAAACAGTGCAGTTCTTGACATTTTCCCAAAGCATGTGCGTAGACACCATGAGGCGAGTTCGTGCCATGTAGATGAAAACAAAGGAATTGATGAACTATGGAAGCACCAGCATAATGACCGTATTGGTTTTAGTTTTCAAATGTTCTTATCAATCATTGCTTTGAATCTTTTCTCTAAGCATGCATTAGACTTGAAATTACTCGATTACATCTCCTACTACATTTTTTTAATTCAGGTATGTTTAGAGCCTTAACCTTAGTTGAAGAGGCAAAAGAAGTTTCCTTAATCAAACTCAACCTTTTTGTTGGAAATGATAACCTTTTGGTGAATCTTCCAATAAAAAGTGGTACATAGCATATGCATCAAATTTACAGTGAACAAAAA

Coding sequence (CDS)

ATGGCTTTATCTTCTCATTTCTTGACCCCTACGGACTGGCATGTAACATCCCTTAGTTCAAACCTCCTCAGCGGCAGTCCATTGTGGTTGCATTCCAAAGTCGACTTCAAGTGTCAAAGAAAAGAAAATTTCAGAACTCATTATACTTTGACTCCTTGTTCCTCTATCAAGATTGTTCGTAGTCGTTCGTTAGATCGGCATGCTGTAAAACATAACAAAACTCGATTTGTGCAAAAGCTGATAATCTTACTGCTATCTAAACCAAAGCATTATATACCACTACACATTCTTTCCAAATGCCGTGGCTATCTTTCCCTTCCCAGACCCCGCTCTCTCCTTTCAATGATTCATCGTTATCCTTCCATTTTTGAACTTTTTTCAATCCCTTATCCACCCACACCACTCAATGCAACAAAGCTTTACCCTCAACTTTGTGTTCGTCTAACCCCAGCAGCAGCATCTATTGCTAAACAGGACTCTGATCTCAAATTGGTAATCTCTAACACATTGGCTGAAAAGCTCCAGAAATTACTTATGCTTTCTTCACACCACAGGATTCTTTTATCAAAGCTGGTTCACCTTGCTCCTGATCTAAGCATGCCCCCAAATTTTAGGTCCCGTCTCTGTAATGATTATCCAGAAAAATTTAGGACTGTTGATACCTCATATGGCCGTGCACTGGAGCTTGTCTCCTGGGACCCCGAGTTGGCAAAGCCTTTACCTTACATACAAGTGCCTTCACGTGAGCTAATAGTGGATAGACCATTAAAATTCAACTTGTTGAGACTAAGAAAGGGGCTGAATTTGAAAAGAACCCACCAGGAATTTCTAATTAAGTTCAGGGATTTGCCAGATGTTTGCCCTTACAAAACTCCAGCGAGTGAGTTGGCCAAGGAGTCTCTCGAGTCAGAGAAACGAGCTTGTGCTGTGGTGCGAGAGGTATTGGGGATGATGATTGAGAAGAGGACTTTAATAGACCACTTGACACATTTCAGAAAAGATTTTGGGCTACCAAATAAACTGAGAGGAATGATTGTGAGGCATCCGGAGTTATTTTATGTGAGTTTGAAGGGTCAGAGAGACTCTGTATTCCTTGTGGAAGGATTTGACGATAAGGGTGTTCTTTTGGAGAAGGATGAGACTTTGGCAATCAAAAATCAATGGATGACGCTTTTGAAGGAAGGTAAAAGGATGAGACGGGAGAAGAAGAAGGCTCAAATATATGACAGTAAATATGGAAATGATCATGCAAACGATAATCATGATCATGAGATGGAAAGTGACTATGATGACGATTACGACGATGGTTTTGAGAGTTTATTTCAGTATGAGGATTTAGATTTTGAAGATGAGAACAGTGGTCTGCCAAGCATTTGGTCGAATGGAGACTTTTGGACTACAAGTAACGTAGCTATTAGTAATGATGCAGATGGGGGTCACATAGAACCTTGGTGA

Protein sequence

MALSSHFLTPTDWHVTSLSSNLLSGSPLWLHSKVDFKCQRKENFRTHYTLTPCSSIKIVRSRSLDRHAVKHNKTRFVQKLIILLLSKPKHYIPLHILSKCRGYLSLPRPRSLLSMIHRYPSIFELFSIPYPPTPLNATKLYPQLCVRLTPAAASIAKQDSDLKLVISNTLAEKLQKLLMLSSHHRILLSKLVHLAPDLSMPPNFRSRLCNDYPEKFRTVDTSYGRALELVSWDPELAKPLPYIQVPSRELIVDRPLKFNLLRLRKGLNLKRTHQEFLIKFRDLPDVCPYKTPASELAKESLESEKRACAVVREVLGMMIEKRTLIDHLTHFRKDFGLPNKLRGMIVRHPELFYVSLKGQRDSVFLVEGFDDKGVLLEKDETLAIKNQWMTLLKEGKRMRREKKKAQIYDSKYGNDHANDNHDHEMESDYDDDYDDGFESLFQYEDLDFEDENSGLPSIWSNGDFWTTSNVAISNDADGGHIEPW
Homology
[Close]
BLAST of PI0027413 vs. ExPASy Swiss-Prot
Match: B6TTV8 (Protein WHAT'S THIS FACTOR 1, chloroplastic OS=Zea mays OX=4577 GN=WTF1 PE=1 SV=1)

HSP 1 Score: 230.7 bits (587), Expect = 3.5e-59
Identity = 155/427 (36.30%), Postives = 223/427 (52.22%), Query Frame = 0 

Query: 54  SSIKIVRSRSLDRHAVKHNKTRFVQKLIILLLSKPKHYIPLHILSKCRGYLSLPRPRSLL 113
           +++K  +    D    +  K + V KL  +L+++P   + L  L + R  L L R R L+
Sbjct: 53  AAVKRRKEAPFDTVIQRDKKLKLVLKLRNILVAQPDRVMSLRELGRFRRDLGLTRKRRLI 112

Query: 114 SMIHRYPSIFELFSIPYPPTPLNATKLYPQLCVRLTPAAASIAKQDSDLKLVISNTLAEK 173
           +++ R+P +F++              +Y  L  RLTPAA  +   +  L+         K
Sbjct: 113 ALLRRFPGVFDVVE----------EGVY-SLRFRLTPAAERLYLDELRLRNESEGLAVAK 172

Query: 174 LQKLLMLSSHHRILLSKLVHLAPDLSMPPNFRSRLCNDYPEKFRTVDTSYGRALELVSWD 233
           L+KLLM+S   RIL+ K+ HL  DL +PP FR  +C  YP+ FR V    G ALEL  WD
Sbjct: 173 LRKLLMMSQEKRILIEKVAHLKHDLGLPPEFRDTVCLRYPQYFRVVRMDRGPALELTHWD 232

Query: 234 PELAKPLPYI--------QVPSRELIVDRPLKFNLLRLRKGLNLKRTHQEFLIKFRDLPD 293
           PELA     +        +   R LI+DRPLKFN +RL KGL L R     + +F+++P 
Sbjct: 233 PELAVSAAELAEEESRAREAEERNLIIDRPLKFNRVRLPKGLKLTRGEARRIARFKEMPY 292

Query: 294 VCPYKTPASELAKESLESEKRACAVVREVLGMMIEKRTLIDHLTHFRKDFGLPNKLRGMI 353
           + PY    S L   S E EK AC VV E+L + +EKRTL+DHLTHFR++F     LRGMI
Sbjct: 293 ISPY-ADFSHLRSGSDEKEKHACGVVHEILSLTVEKRTLVDHLTHFREEFRFSQSLRGMI 352

Query: 354 VRHPELFYVSLKGQRDSVFLVEGFDDKGVLLEKDETLAIKNQWMTLLKEGKRMRREKKKA 413
           +RHP++FYVS KG RDSVFL E + D   L+EK++ + +K +   L+   +  RR     
Sbjct: 353 IRHPDMFYVSFKGDRDSVFLREAYKD-SQLVEKNQLVLLKEKMRALVAVPRFPRR----- 412

Query: 414 QIYDSKYGNDHANDNHDHEMESD---YDDDYDDGFESLFQYEDLDFEDENSGLPSIWSNG 470
               +  G     +  +  ++S     D++YDD  E L   EDL  E       + +  G
Sbjct: 413 ----AAVGTGEEAEGMNGSLQSRDQVSDEEYDDEDEGLSDMEDLISELSGGKSDADYEWG 457

[Close]
BLAST of PI0027413 vs. ExPASy Swiss-Prot
Match: Q65XL5 (Protein WHAT'S THIS FACTOR 1 homolog, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0571100 PE=2 SV=1)

HSP 1 Score: 226.9 bits (577), Expect = 5.0e-58
Identity = 154/424 (36.32%), Postives = 218/424 (51.42%), Query Frame = 0 

Query: 54  SSIKIVRSRSLDRHAVKHNKTRFVQKLIILLLSKPKHYIPLHILSKCRGYLSLPRPRSLL 113
           +++K  +    D    +  K + V KL  +L+S P   + L  L + R  L L R R L+
Sbjct: 59  AAVKRRKEIPFDNVIQRDKKLKLVLKLRNILVSNPDRVMSLRDLGRFRRDLGLTRKRRLI 118

Query: 114 SMIHRYPSIFELFSIPYPPTPLNATKLYPQLCVRLTPAAASIAKQDSDLKLVISNTLAEK 173
           +++ R+P +FE+              +Y  L  RLTPAA  +   +  LK         K
Sbjct: 119 ALLKRFPGVFEVVE----------EGVY-SLRFRLTPAAERLYLDELHLKNESEGLAVTK 178

Query: 174 LQKLLMLSSHHRILLSKLVHLAPDLSMPPNFRSRLCNDYPEKFRTVDTSYGRALELVSWD 233
           L+KLLM+S   RIL+ K+ HL  DL +PP FR  +C  YP+ FR V    G  LEL  WD
Sbjct: 179 LRKLLMMSQDKRILIEKIAHLKNDLGLPPEFRDTICLRYPQYFRVVQMDRGPGLELTHWD 238

Query: 234 PELAKPLPYI--------QVPSRELIVDRPLKFNLLRLRKGLNLKRTHQEFLIKFRDLPD 293
           PELA     +        +   R LI+DRPLKFN ++L +GL L R     + +F+++P 
Sbjct: 239 PELAVSAAEVAEEENRAREEQERNLIIDRPLKFNRVKLPQGLKLSRGEARRVAQFKEMPY 298

Query: 294 VCPYKTPASELAKESLESEKRACAVVREVLGMMIEKRTLIDHLTHFRKDFGLPNKLRGMI 353
           + PY +  S L   S E EK AC VV E+L + +EKRTL+DHLTHFR++F     LRGM+
Sbjct: 299 ISPY-SDFSHLRSGSAEKEKHACGVVHEILSLTLEKRTLVDHLTHFREEFRFSQSLRGML 358

Query: 354 VRHPELFYVSLKGQRDSVFLVEGFDDKGVLLEKDETLAIKNQWMTLLKEGKRMRREKKKA 413
           +RHP++FYVSLKG RDSVFL E + +   L+EK + + +K +   L+   +  RR     
Sbjct: 359 IRHPDMFYVSLKGDRDSVFLREAYKN-SQLVEKSKLVLLKEKMRALVAVPRFPRRGVPAT 418

Query: 414 QIYDSKYGNDHANDNHDHEMESDYDDDYDDGFESLFQYEDLDFEDENSGLPSIWSNGDFW 470
                    +    N   +M S+  D  DD  E L   EDL  E       + +  GD W
Sbjct: 419 -------SEEADRTNGAAQMLSEGSDVEDDEDEGLSDMEDLISEISGGKSDTDYHWGDGW 462

[Close]
BLAST of PI0027413 vs. ExPASy Swiss-Prot
Match: A0MFS5 (Protein WHAT'S THIS FACTOR 1 homolog, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At4g01037 PE=3 SV=1)

HSP 1 Score: 222.2 bits (565), Expect = 1.2e-56
Identity = 139/392 (35.46%), Postives = 212/392 (54.08%), Query Frame = 0 

Query: 54  SSIKIVRSRSLDRHAVKHNKTRFVQKLIILLLSKPKHYIPLHILSKCRGYLSLPRPRSLL 113
           +++K  +  + D    +  K + V  +  +L+S+P   + L  L K R  L L + R  +
Sbjct: 74  AAVKRRKELTFDSVVQRDKKLKLVLNIRKILVSQPDRMMSLRGLGKYRRDLGLKKRRRFI 133

Query: 114 SMIHRYPSIFELFSIPYPPTPLNATKLYPQLCVRLTPAAASIAKQDSDLKLVISNTLAEK 173
           +++ +YP +FE+             +    L  ++T  A  +   +  ++  + + L  K
Sbjct: 134 ALLRKYPGVFEI-----------VEEGAYSLRFKMTSEAERLYLDEMRIRNELEDVLVVK 193

Query: 174 LQKLLMLSSHHRILLSKLVHLAPDLSMPPNFRSRLCNDYPEKFRTVDTSYGRALELVSWD 233
           L+KL+M+S   RILL K+ HL  DL +P  FR  +C  YP+ FR V T  G ALEL  WD
Sbjct: 194 LRKLVMMSIDKRILLEKISHLKTDLGLPLEFRDTICQRYPQYFRVVPTPRGPALELTHWD 253

Query: 234 PELAKPLPYI--------QVPSRELIVDRPLKFNLLRLRKGLNLKRTHQEFLIKFRDLPD 293
           PELA     +        +   R LI+DRP KFN ++L +GLNL ++    + +FRD+  
Sbjct: 254 PELAVSAAELSEDDNRTRESEERNLIIDRPPKFNRVKLPRGLNLSKSETRKISQFRDMQY 313

Query: 294 VCPYKTPASELAKESLESEKRACAVVREVLGMMIEKRTLIDHLTHFRKDFGLPNKLRGMI 353
           + PYK   S L   +LE EK AC V+ E+L +  EKRTL+DHLTHFR++F    +LRGM+
Sbjct: 314 ISPYK-DFSHLRSGTLEKEKHACGVIHELLSLTTEKRTLVDHLTHFREEFRFSQQLRGML 373

Query: 354 VRHPELFYVSLKGQRDSVFLVEGFDDKGVLLEKDETLAIKNQWMTLL-------KEGKRM 413
           +RHP+LFYVSLKG+RDSVFL E + +   L++KD    +K +   L+       + G R 
Sbjct: 374 IRHPDLFYVSLKGERDSVFLREAYRN-SELIDKDPLTLVKEKMRALVSVPRFPRRGGPRK 433

Query: 414 RREKKKAQIYDSKYGNDHANDNHDHEMESDYD 431
             E ++ +I  S    +   +  D E  SD D
Sbjct: 434 DEEGREVEIDGSDADGEEEEEESDAEEWSDVD 452

[Close]
BLAST of PI0027413 vs. ExPASy Swiss-Prot
Match: Q689D6 (Protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Arabidopsis thaliana OX=3702 GN=RPD1 PE=1 SV=1)

HSP 1 Score: 91.3 bits (225), Expect = 3.3e-17
Identity = 90/375 (24.00%), Postives = 174/375 (46.40%), Query Frame = 0 

Query: 59  VRSRSLDRHAVKHNKTRFVQKLIILLLSKPKHYIPLHILSKCRGYLSLP-RPRSLLSMIH 118
           VR    D +     K R V K   L+LS+P H I + +L      L L  +     + + 
Sbjct: 47  VRDHGYDNYMEVEKKIRKVVKFHSLILSQPNHTIAISLLDTLARRLGLGFKQHEPGAFLL 106

Query: 119 RYPSIFELFSIPYPPTPLNATKLYPQLCVRLTPAAASIAKQDSDLKLVISNTLAEKLQKL 178
           ++P +FE++  P          +   L  RLT  A    + + +  L        +L+KL
Sbjct: 107 KFPHVFEIYEHP----------VQRILYCRLTRKALDQIRHEHEAVLDQIPDAVTRLRKL 166

Query: 179 LMLSSHHRILLSKLVHLAPDLSMPPNFRSRLCNDYPEKFRTVD--TSYGRALELVSWDPE 238
           +M+S+  RI L  +     +  +P +F   +   +P+ FR +D   +  + +E+V  DP 
Sbjct: 167 VMMSNTGRIRLEHVRIARTEFGLPEDFEYSVILKHPQFFRLIDGEETRDKYIEIVEKDPN 226

Query: 239 LA----KPLPYIQVPSRELIVDRPLKFNLLRLRKGLNLKRTHQEFLIKFRDLPDVCPYKT 298
           L+    + +  I+  ++ +  +      ++    G  + +  +  + K++ LP   PY+ 
Sbjct: 227 LSICAIERVREIEYRTKGIDAEDVRFSFVVNFPPGFKIGKYFRIAVWKWQRLPYWSPYE- 286

Query: 299 PASELAKESLES----EKRACAVVREVLGMMIEKRTLIDHLTHFRKDFGLPNKLRGMIVR 358
             S     S+E+    EKR+ A + E+L + +EK+  ++ + HFR    LP KL+  +++
Sbjct: 287 DISGYDLRSMEAQNRLEKRSVACIHELLSLTVEKKITLERIAHFRNVMNLPKKLKEFLLQ 346

Query: 359 HPELFYVSLK---GQRDSVFLVEGFDDKGVLLEKDETLAIKNQWMTLLKEGKRMRREKKK 418
           H  +FY+S +   G+  +VFL EG+  +G L+E ++    + +   L+      R+ K  
Sbjct: 347 HQGIFYISTRGNYGKLHTVFLREGY-KRGELVEPNDVYLARRRLAELVLMSP--RKAKVD 406

Query: 419 AQIYDSKYGNDHAND 420
           A++   + G D  +D
Sbjct: 407 AELVRYRDGLDDEDD 407

[Close]
BLAST of PI0027413 vs. ExPASy Swiss-Prot
Match: Q9ZUZ6 (Protein WHAT'S THIS FACTOR 9, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=WTF9 PE=4 SV=1)

HSP 1 Score: 90.9 bits (224), Expect = 4.3e-17
Identity = 83/347 (23.92%), Postives = 160/347 (46.11%), Query Frame = 0 

Query: 67  HAVKHNKTRFVQKLIILLLSKPKHYIPLHILSKCRGYLSLPRPRSLLSMIHRYPSIFELF 126
           H ++ ++ + V  L   ++ +P   IP+  +SK      +     +   + ++PSIFE F
Sbjct: 42  HILRSSQLKSVVSLKNCIVQEPNRCIPISAISKKTRQFDV--STKIAHFLRKFPSIFEEF 101

Query: 127 SIPYPPTPLNATKLYPQLCVRLTPAAASIAKQDSDLKLVISNTLAEKLQKLLMLSSHHRI 186
             P    P            RLTP A  + +Q+  +    ++ L ++L+KL+++S  + +
Sbjct: 102 VGPEYNLP----------WFRLTPEATELDRQERVVYQTSADDLRDRLKKLILMSKDNVL 161

Query: 187 LLSKLVHLAPDLSMPPNFRSRLCNDYPEKFRTVDTS---YGRALELVSWDPELAKPLPYI 246
            LS +  +   L +P ++      +    FR VD      G A++    D  L+      
Sbjct: 162 PLSIVQGMKWYLGLPDDYLQFPDMNLDSSFRFVDMEDGVKGLAVDYNGGDKVLSVLQKNA 221

Query: 247 QVPSRELIVDRPLKFNLLRLRKGLNLKRTHQEFLIKFRDLPDVCPYK-----TPASELAK 306
               R  +    ++F L    KG  L+   +++L++F+ LP V PY       P+S++A 
Sbjct: 222 MKKRRGEVSLEEIEFPLFP-SKGCRLRVKIEDWLMEFQKLPYVSPYDDYSCLDPSSDIA- 281

Query: 307 ESLESEKRACAVVREVLGMMIEKRTLIDHLTHFRKDFGLPNKLRGMIVRHPELFYVSLKG 366
                EKR    + E+L + +E       L   +K FGLP K+     RHP++FY+S+K 
Sbjct: 282 -----EKRVVGFLHELLCLFVEHSAERKKLLCLKKHFGLPQKVHKAFERHPQIFYLSMKN 341

Query: 367 QRDSVFLVEGFDDKGVLLEKDETLAIKNQWMTLLKEGKRMRREKKKA 406
           +  +  L E + DK   +E    L ++ +++ L+K  + + + ++ +
Sbjct: 342 KTCTAILREPYRDK-ASVETHPVLGVRKKYIQLMKNSELILKSRRNS 368

[Close]
BLAST of PI0027413 vs. ExPASy TrEMBL
Match: A0A0A0KU86 (PORR domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G015830 PE=4 SV=1)

HSP 1 Score: 945.3 bits (2442), Expect = 1.0e-271
Identity = 469/484 (96.90%), Postives = 477/484 (98.55%), Query Frame = 0 

Query: 1   MALSSHFLTPTDWHVTSLSSNLLSGSPLWLHSKVDFKCQRKENFRTHYTLTPCSSIKIVR 60
           MAL SHFLTPTDWHVTSLSSNLLSGSPLWLHSKVDFKCQRKENFRTHYTLTPCSSIKIVR
Sbjct: 1   MALCSHFLTPTDWHVTSLSSNLLSGSPLWLHSKVDFKCQRKENFRTHYTLTPCSSIKIVR 60

Query: 61  SRSLDRHAVKHNKTRFVQKLIILLLSKPKHYIPLHILSKCRGYLSLPRPRSLLSMIHRYP 120
           SRSLDRHAVKHNKTRFVQKLIILLLSKPKHYIPLHILSKCRGYLSLPRPRSLLSMIHRYP
Sbjct: 61  SRSLDRHAVKHNKTRFVQKLIILLLSKPKHYIPLHILSKCRGYLSLPRPRSLLSMIHRYP 120

Query: 121 SIFELFSIPYPPTPLNATKLYPQLCVRLTPAAASIAKQDSDLKLVISNTLAEKLQKLLML 180
           SIFELFSIPYPPTPLNATKLYPQLCVRLTPAAASIAKQDSDLK+VISN LAEKLQKLLML
Sbjct: 121 SIFELFSIPYPPTPLNATKLYPQLCVRLTPAAASIAKQDSDLKMVISNKLAEKLQKLLML 180

Query: 181 SSHHRILLSKLVHLAPDLSMPPNFRSRLCNDYPEKFRTVDTSYGRALELVSWDPELAKPL 240
           SSHHRILLSKLVHLAPDLS+PPNFRSRLCNDYPEKFRTVDTSYGRALELVSWDPELAKPL
Sbjct: 181 SSHHRILLSKLVHLAPDLSLPPNFRSRLCNDYPEKFRTVDTSYGRALELVSWDPELAKPL 240

Query: 241 PYIQVPSRELIVDRPLKFNLLRLRKGLNLKRTHQEFLIKFRDLPDVCPYKTPASELAKES 300
           P IQVPSRELIVDRPLKFNLLRLRKGLNLKRTHQEFLIKFRDLPDVCPYK PASELAKES
Sbjct: 241 PCIQVPSRELIVDRPLKFNLLRLRKGLNLKRTHQEFLIKFRDLPDVCPYKNPASELAKES 300

Query: 301 LESEKRACAVVREVLGMMIEKRTLIDHLTHFRKDFGLPNKLRGMIVRHPELFYVSLKGQR 360
           LESEKRACAVVREVLGMM+EKRTLIDHLTHFRKDFGLPNKLRGMIVRHPELFYVSLKGQR
Sbjct: 301 LESEKRACAVVREVLGMMVEKRTLIDHLTHFRKDFGLPNKLRGMIVRHPELFYVSLKGQR 360

Query: 361 DSVFLVEGFDDKGVLLEKDETLAIKNQWMTLLKEGKRMRREKKKAQIYDSKYGNDHANDN 420
           DSVFLVEGFDDKGVLLEKDETLAIKNQWMTLLKE KR+RREKKKAQIYDSKYGNDH N+N
Sbjct: 361 DSVFLVEGFDDKGVLLEKDETLAIKNQWMTLLKEAKRLRREKKKAQIYDSKYGNDHENNN 420

Query: 421 HDHEMESDYDDDYDDGFESLFQYEDLDFEDENSGLPSIWSNGDFWTTSNVAISNDADGGH 480
           HDHEME+DYDDDYDDGFESLFQYEDLDFEDENSG+PSIWSNGDFWTT+NV ISNDADGGH
Sbjct: 421 HDHEMENDYDDDYDDGFESLFQYEDLDFEDENSGVPSIWSNGDFWTTNNVDISNDADGGH 480

Query: 481 IEPW 485
           IEPW
Sbjct: 481 IEPW 484

[Close]
BLAST of PI0027413 vs. ExPASy TrEMBL
Match: A0A5A7TP08 (Protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold46G003590 PE=4 SV=1)

HSP 1 Score: 928.3 bits (2398), Expect = 1.3e-266
Identity = 465/484 (96.07%), Postives = 472/484 (97.52%), Query Frame = 0 

Query: 1   MALSSHFLTPTDWHVTSLSSNLLSGSPLWLHSKVDFKCQRKENFRTHYTLTPCSSIKIVR 60
           MALSS FLTPTDWH  SLSSNLLSGSPLWLHSKVDFKCQRKENF THYTLTPCSSIKIVR
Sbjct: 1   MALSSRFLTPTDWH-ASLSSNLLSGSPLWLHSKVDFKCQRKENFITHYTLTPCSSIKIVR 60

Query: 61  SRSLDRHAVKHNKTRFVQKLIILLLSKPKHYIPLHILSKCRGYLSLPRPRSLLSMIHRYP 120
           SRSLDRHAVKHNKTRFVQKLIILLLSKPKHYIPLHILSKCRGYLSLPRPRSLLSMIHRYP
Sbjct: 61  SRSLDRHAVKHNKTRFVQKLIILLLSKPKHYIPLHILSKCRGYLSLPRPRSLLSMIHRYP 120

Query: 121 SIFELFSIPYPPTPLNATKLYPQLCVRLTPAAASIAKQDSDLKLVISNTLAEKLQKLLML 180
           SIFELFSIPYPPTPLNATKLYPQLCVRLT AAASIAKQDSDLKLVISNTLAEKLQKLLML
Sbjct: 121 SIFELFSIPYPPTPLNATKLYPQLCVRLTAAAASIAKQDSDLKLVISNTLAEKLQKLLML 180

Query: 181 SSHHRILLSKLVHLAPDLSMPPNFRSRLCNDYPEKFRTVDTSYGRALELVSWDPELAKPL 240
           SSHHRILLSKLVHLAPDLSMPPNFRSRLCNDYPEKFRTVDTSYGRALELVSWDPELAKPL
Sbjct: 181 SSHHRILLSKLVHLAPDLSMPPNFRSRLCNDYPEKFRTVDTSYGRALELVSWDPELAKPL 240

Query: 241 PYIQVPSRELIVDRPLKFNLLRLRKGLNLKRTHQEFLIKFRDLPDVCPYKTPASELAKES 300
           P IQVPSRELIVDRPLKFNLLRLRKGLNLKRTHQEFLIKFRDLPD+CPYKTPASELAKES
Sbjct: 241 PCIQVPSRELIVDRPLKFNLLRLRKGLNLKRTHQEFLIKFRDLPDICPYKTPASELAKES 300

Query: 301 LESEKRACAVVREVLGMMIEKRTLIDHLTHFRKDFGLPNKLRGMIVRHPELFYVSLKGQR 360
           LESEKRACAVVREVLGMMIEKRTLIDHLTHFRKDFGLPNKLRGMIVRHPELFYVSLKGQR
Sbjct: 301 LESEKRACAVVREVLGMMIEKRTLIDHLTHFRKDFGLPNKLRGMIVRHPELFYVSLKGQR 360

Query: 361 DSVFLVEGFDDKGVLLEKDETLAIKNQWMTLLKEGKRMRREKKKAQIYDSKYGNDHANDN 420
           DSVFLVEGFDDKG LLEKDETLAIKN+WM LLKEGKRMRREKKKAQIYDSKYGNDH N+N
Sbjct: 361 DSVFLVEGFDDKGALLEKDETLAIKNRWMALLKEGKRMRREKKKAQIYDSKYGNDHENNN 420

Query: 421 HDHEMESDYDDDYDDGFESLFQYEDLDFEDENSGLPSIWSNGDFWTTSNVAISNDADGGH 480
           HDHEME+DYDD+YDDGFESLFQYEDLDFEDENSG+PSIWSNGDFWTT+NV ISND DG H
Sbjct: 421 HDHEMENDYDDNYDDGFESLFQYEDLDFEDENSGVPSIWSNGDFWTTNNVDISNDTDGSH 480

Query: 481 IEPW 485
           IEPW
Sbjct: 481 IEPW 483

[Close]
BLAST of PI0027413 vs. ExPASy TrEMBL
Match: A0A1S3BYB2 (protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Cucumis melo OX=3656 GN=LOC103494529 PE=4 SV=1)

HSP 1 Score: 924.5 bits (2388), Expect = 1.9e-265
Identity = 464/484 (95.87%), Postives = 470/484 (97.11%), Query Frame = 0 

Query: 1   MALSSHFLTPTDWHVTSLSSNLLSGSPLWLHSKVDFKCQRKENFRTHYTLTPCSSIKIVR 60
           MALSSHFLTP DWH  SLSSNLLSGSPLWLHSKVD KCQRKENF THYTLTPCSSIKIVR
Sbjct: 1   MALSSHFLTPADWH-ASLSSNLLSGSPLWLHSKVDLKCQRKENFITHYTLTPCSSIKIVR 60

Query: 61  SRSLDRHAVKHNKTRFVQKLIILLLSKPKHYIPLHILSKCRGYLSLPRPRSLLSMIHRYP 120
           SRSLDRHAVKHNKTRFVQKLIILLLSKPKHYIPLHILSKCRGYLSLPRPRSLLSMIHRYP
Sbjct: 61  SRSLDRHAVKHNKTRFVQKLIILLLSKPKHYIPLHILSKCRGYLSLPRPRSLLSMIHRYP 120

Query: 121 SIFELFSIPYPPTPLNATKLYPQLCVRLTPAAASIAKQDSDLKLVISNTLAEKLQKLLML 180
           SIFELFSIPYPPTPLNATKLYPQLCVRLT AAASIAKQDSDLKLVISNTLAEKLQKLLML
Sbjct: 121 SIFELFSIPYPPTPLNATKLYPQLCVRLTAAAASIAKQDSDLKLVISNTLAEKLQKLLML 180

Query: 181 SSHHRILLSKLVHLAPDLSMPPNFRSRLCNDYPEKFRTVDTSYGRALELVSWDPELAKPL 240
           SSHHRILLSKLVHLAPDLSMPPNFRSRLCNDYPEKFRTVDTSYGRALELVSWDPELAKPL
Sbjct: 181 SSHHRILLSKLVHLAPDLSMPPNFRSRLCNDYPEKFRTVDTSYGRALELVSWDPELAKPL 240

Query: 241 PYIQVPSRELIVDRPLKFNLLRLRKGLNLKRTHQEFLIKFRDLPDVCPYKTPASELAKES 300
           P IQVPSRELIVDRPLKFNLLRLRKGLNLKRTHQEFLIKFRDLPDVCPYKTPASELAKES
Sbjct: 241 PCIQVPSRELIVDRPLKFNLLRLRKGLNLKRTHQEFLIKFRDLPDVCPYKTPASELAKES 300

Query: 301 LESEKRACAVVREVLGMMIEKRTLIDHLTHFRKDFGLPNKLRGMIVRHPELFYVSLKGQR 360
           LESEKRACAVVREVLGMMIEKRTLIDHLTHFRKDFGLPNKLRGMIVRHPELFYVSLKGQR
Sbjct: 301 LESEKRACAVVREVLGMMIEKRTLIDHLTHFRKDFGLPNKLRGMIVRHPELFYVSLKGQR 360

Query: 361 DSVFLVEGFDDKGVLLEKDETLAIKNQWMTLLKEGKRMRREKKKAQIYDSKYGNDHANDN 420
           DSVFLVEGFDDKG LLEKDETLAIKN+WM LLKEGKRMRREKKKAQIYDSKYGNDH N+N
Sbjct: 361 DSVFLVEGFDDKGALLEKDETLAIKNRWMALLKEGKRMRREKKKAQIYDSKYGNDHENNN 420

Query: 421 HDHEMESDYDDDYDDGFESLFQYEDLDFEDENSGLPSIWSNGDFWTTSNVAISNDADGGH 480
           HDHEME+DYDD+YDDGFESLFQYEDLDFEDENSG+PSIWSNGDFWTT+NV ISND D  H
Sbjct: 421 HDHEMENDYDDNYDDGFESLFQYEDLDFEDENSGVPSIWSNGDFWTTNNVDISNDTDESH 480

Query: 481 IEPW 485
           IEPW
Sbjct: 481 IEPW 483

[Close]
BLAST of PI0027413 vs. ExPASy TrEMBL
Match: A0A5D3D0F7 (Protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold130G001190 PE=4 SV=1)

HSP 1 Score: 924.5 bits (2388), Expect = 1.9e-265
Identity = 464/484 (95.87%), Postives = 470/484 (97.11%), Query Frame = 0 

Query: 1   MALSSHFLTPTDWHVTSLSSNLLSGSPLWLHSKVDFKCQRKENFRTHYTLTPCSSIKIVR 60
           MALSSHFLTP DWH  SLSSNLLSGSPLWLHSKVD KCQRKENF THYTLTPCSSIKIVR
Sbjct: 1   MALSSHFLTPADWH-ASLSSNLLSGSPLWLHSKVDLKCQRKENFITHYTLTPCSSIKIVR 60

Query: 61  SRSLDRHAVKHNKTRFVQKLIILLLSKPKHYIPLHILSKCRGYLSLPRPRSLLSMIHRYP 120
           SRSLDRHAVKHNKTRFVQKLIILLLSKPKHYIPLHILSKCRGYLSLPRPRSLLSMIHRYP
Sbjct: 61  SRSLDRHAVKHNKTRFVQKLIILLLSKPKHYIPLHILSKCRGYLSLPRPRSLLSMIHRYP 120

Query: 121 SIFELFSIPYPPTPLNATKLYPQLCVRLTPAAASIAKQDSDLKLVISNTLAEKLQKLLML 180
           SIFELFSIPYPPTPLNATKLYPQLCVRLT AAASIAKQDSDLKLVISNTLAEKLQKLLML
Sbjct: 121 SIFELFSIPYPPTPLNATKLYPQLCVRLTAAAASIAKQDSDLKLVISNTLAEKLQKLLML 180

Query: 181 SSHHRILLSKLVHLAPDLSMPPNFRSRLCNDYPEKFRTVDTSYGRALELVSWDPELAKPL 240
           SSHHRILLSKLVHLAPDLSMPPNFRSRLCNDYPEKFRTVDTSYGRALELVSWDPELAKPL
Sbjct: 181 SSHHRILLSKLVHLAPDLSMPPNFRSRLCNDYPEKFRTVDTSYGRALELVSWDPELAKPL 240

Query: 241 PYIQVPSRELIVDRPLKFNLLRLRKGLNLKRTHQEFLIKFRDLPDVCPYKTPASELAKES 300
           P IQVPSRELIVDRPLKFNLLRLRKGLNLKRTHQEFLIKFRDLPDVCPYKTPASELAKES
Sbjct: 241 PCIQVPSRELIVDRPLKFNLLRLRKGLNLKRTHQEFLIKFRDLPDVCPYKTPASELAKES 300

Query: 301 LESEKRACAVVREVLGMMIEKRTLIDHLTHFRKDFGLPNKLRGMIVRHPELFYVSLKGQR 360
           LESEKRACAVVREVLGMMIEKRTLIDHLTHFRKDFGLPNKLRGMIVRHPELFYVSLKGQR
Sbjct: 301 LESEKRACAVVREVLGMMIEKRTLIDHLTHFRKDFGLPNKLRGMIVRHPELFYVSLKGQR 360

Query: 361 DSVFLVEGFDDKGVLLEKDETLAIKNQWMTLLKEGKRMRREKKKAQIYDSKYGNDHANDN 420
           DSVFLVEGFDDKG LLEKDETLAIKN+WM LLKEGKRMRREKKKAQIYDSKYGNDH N+N
Sbjct: 361 DSVFLVEGFDDKGALLEKDETLAIKNRWMALLKEGKRMRREKKKAQIYDSKYGNDHENNN 420

Query: 421 HDHEMESDYDDDYDDGFESLFQYEDLDFEDENSGLPSIWSNGDFWTTSNVAISNDADGGH 480
           HDHEME+DYDD+YDDGFESLFQYEDLDFEDENSG+PSIWSNGDFWTT+NV ISND D  H
Sbjct: 421 HDHEMENDYDDNYDDGFESLFQYEDLDFEDENSGVPSIWSNGDFWTTNNVDISNDTDESH 480

Query: 481 IEPW 485
           IEPW
Sbjct: 481 IEPW 483

[Close]
BLAST of PI0027413 vs. ExPASy TrEMBL
Match: A0A6J1GVP1 (protein WHAT'S THIS FACTOR 1 OS=Cucurbita moschata OX=3662 GN=LOC111457587 PE=4 SV=1)

HSP 1 Score: 865.1 bits (2234), Expect = 1.3e-247
Identity = 436/485 (89.90%), Postives = 456/485 (94.02%), Query Frame = 0 

Query: 1   MALSSHFLTPTDWHVTSLSSNLLSGSPLWLHSKVDFKCQRKENFRTHYTLTPCSSIKIVR 60
           MALSS FLTP DWHVTSLSSNLL G+PLWLHS V  K QRKENF+T YTLTP +S+KIVR
Sbjct: 1   MALSSQFLTPRDWHVTSLSSNLLCGTPLWLHSNVGCKYQRKENFKTCYTLTPRASVKIVR 60

Query: 61  SRSLDRHAVKHNKTRFVQKLIILLLSKPKHYIPLHILSKCRGYLSLPRPRSLLSMIHRYP 120
           SR LDRHAVKHNKTRFVQKLIILLLSKPKHYIP+HILSKCRGYLSLP+PRSLLSMIHRYP
Sbjct: 61  SRPLDRHAVKHNKTRFVQKLIILLLSKPKHYIPIHILSKCRGYLSLPKPRSLLSMIHRYP 120

Query: 121 SIFELFSIPYPPTPLNATKLYPQLCVRLTPAAASIAKQDSDLKLVISNTLAEKLQKLLML 180
           SIFELFSIPYPPTPLNATKLYPQLCVRLTP AAS+AKQDS+LKLVISNTLAEKLQKLLML
Sbjct: 121 SIFELFSIPYPPTPLNATKLYPQLCVRLTPVAASLAKQDSNLKLVISNTLAEKLQKLLML 180

Query: 181 SSHHRILLSKLVHLAPDLSMPPNFRSRLCNDYPEKFRTVDTSYGRALELVSWDPELAKPL 240
           SSHHRILLSKLVHLAPDLSMPPNFRSRLCNDYPEKFRTVDTSYGRALELV WDPELAKPL
Sbjct: 181 SSHHRILLSKLVHLAPDLSMPPNFRSRLCNDYPEKFRTVDTSYGRALELVFWDPELAKPL 240

Query: 241 PYIQVPSRELIVDRPLKFNLLRLRKGLNLKRTHQEFLIKFRDLPDVCPYKTPASELAKES 300
           P +QV SRELIVDRPLKFNLL+LRKGLNLKR HQEFLIKFRDLPDVCPYKTPASELAKES
Sbjct: 241 PCLQVSSRELIVDRPLKFNLLKLRKGLNLKRAHQEFLIKFRDLPDVCPYKTPASELAKES 300

Query: 301 LESEKRACAVVREVLGMMIEKRTLIDHLTHFRKDFGLPNKLRGMIVRHPELFYVSLKGQR 360
           LESEKRACAVVREVLGMMIEKRTLIDHLTHFRKDFGLPNKLRGMIVRHPELFYVSLKGQR
Sbjct: 301 LESEKRACAVVREVLGMMIEKRTLIDHLTHFRKDFGLPNKLRGMIVRHPELFYVSLKGQR 360

Query: 361 DSVFLVEGFDDKGVLLEKDETLAIKNQWMTLLKEGKRMRREKKKAQIYDSKYGNDHANDN 420
           DSVFLVEGF+DKG L+EKDETLAIKNQWM LL EGKRMRREK+KAQIYDS+YGNDH N +
Sbjct: 361 DSVFLVEGFNDKGHLIEKDETLAIKNQWMKLLMEGKRMRREKRKAQIYDSRYGNDHENHS 420

Query: 421 HDHEMESDYDDDYDDGFESLFQYEDLDFEDENSGLPSIWSNGDFWTTSNVA-ISNDADGG 480
           HDHEME+DYDDDY+DGFESLFQYEDLDFEDE S LPS  SNGDFWTT+N A I N  +GG
Sbjct: 421 HDHEMETDYDDDYEDGFESLFQYEDLDFEDEESDLPSNRSNGDFWTTNNAADIINGENGG 480

Query: 481 HIEPW 485
           HI+PW
Sbjct: 481 HIKPW 485

[Close]
BLAST of PI0027413 vs. NCBI nr
Match: XP_004152293.1 (protein WHAT'S THIS FACTOR 1, chloroplastic [Cucumis sativus] >XP_031739932.1 protein WHAT'S THIS FACTOR 1, chloroplastic [Cucumis sativus] >KGN53093.1 hypothetical protein Csa_015066 [Cucumis sativus])

HSP 1 Score: 945.3 bits (2442), Expect = 2.1e-271
Identity = 469/484 (96.90%), Postives = 477/484 (98.55%), Query Frame = 0 

Query: 1   MALSSHFLTPTDWHVTSLSSNLLSGSPLWLHSKVDFKCQRKENFRTHYTLTPCSSIKIVR 60
           MAL SHFLTPTDWHVTSLSSNLLSGSPLWLHSKVDFKCQRKENFRTHYTLTPCSSIKIVR
Sbjct: 1   MALCSHFLTPTDWHVTSLSSNLLSGSPLWLHSKVDFKCQRKENFRTHYTLTPCSSIKIVR 60

Query: 61  SRSLDRHAVKHNKTRFVQKLIILLLSKPKHYIPLHILSKCRGYLSLPRPRSLLSMIHRYP 120
           SRSLDRHAVKHNKTRFVQKLIILLLSKPKHYIPLHILSKCRGYLSLPRPRSLLSMIHRYP
Sbjct: 61  SRSLDRHAVKHNKTRFVQKLIILLLSKPKHYIPLHILSKCRGYLSLPRPRSLLSMIHRYP 120

Query: 121 SIFELFSIPYPPTPLNATKLYPQLCVRLTPAAASIAKQDSDLKLVISNTLAEKLQKLLML 180
           SIFELFSIPYPPTPLNATKLYPQLCVRLTPAAASIAKQDSDLK+VISN LAEKLQKLLML
Sbjct: 121 SIFELFSIPYPPTPLNATKLYPQLCVRLTPAAASIAKQDSDLKMVISNKLAEKLQKLLML 180

Query: 181 SSHHRILLSKLVHLAPDLSMPPNFRSRLCNDYPEKFRTVDTSYGRALELVSWDPELAKPL 240
           SSHHRILLSKLVHLAPDLS+PPNFRSRLCNDYPEKFRTVDTSYGRALELVSWDPELAKPL
Sbjct: 181 SSHHRILLSKLVHLAPDLSLPPNFRSRLCNDYPEKFRTVDTSYGRALELVSWDPELAKPL 240

Query: 241 PYIQVPSRELIVDRPLKFNLLRLRKGLNLKRTHQEFLIKFRDLPDVCPYKTPASELAKES 300
           P IQVPSRELIVDRPLKFNLLRLRKGLNLKRTHQEFLIKFRDLPDVCPYK PASELAKES
Sbjct: 241 PCIQVPSRELIVDRPLKFNLLRLRKGLNLKRTHQEFLIKFRDLPDVCPYKNPASELAKES 300

Query: 301 LESEKRACAVVREVLGMMIEKRTLIDHLTHFRKDFGLPNKLRGMIVRHPELFYVSLKGQR 360
           LESEKRACAVVREVLGMM+EKRTLIDHLTHFRKDFGLPNKLRGMIVRHPELFYVSLKGQR
Sbjct: 301 LESEKRACAVVREVLGMMVEKRTLIDHLTHFRKDFGLPNKLRGMIVRHPELFYVSLKGQR 360

Query: 361 DSVFLVEGFDDKGVLLEKDETLAIKNQWMTLLKEGKRMRREKKKAQIYDSKYGNDHANDN 420
           DSVFLVEGFDDKGVLLEKDETLAIKNQWMTLLKE KR+RREKKKAQIYDSKYGNDH N+N
Sbjct: 361 DSVFLVEGFDDKGVLLEKDETLAIKNQWMTLLKEAKRLRREKKKAQIYDSKYGNDHENNN 420

Query: 421 HDHEMESDYDDDYDDGFESLFQYEDLDFEDENSGLPSIWSNGDFWTTSNVAISNDADGGH 480
           HDHEME+DYDDDYDDGFESLFQYEDLDFEDENSG+PSIWSNGDFWTT+NV ISNDADGGH
Sbjct: 421 HDHEMENDYDDDYDDGFESLFQYEDLDFEDENSGVPSIWSNGDFWTTNNVDISNDADGGH 480

Query: 481 IEPW 485
           IEPW
Sbjct: 481 IEPW 484

[Close]
BLAST of PI0027413 vs. NCBI nr
Match: KAA0044608.1 (protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucumis melo var. makuwa])

HSP 1 Score: 928.3 bits (2398), Expect = 2.7e-266
Identity = 465/484 (96.07%), Postives = 472/484 (97.52%), Query Frame = 0 

Query: 1   MALSSHFLTPTDWHVTSLSSNLLSGSPLWLHSKVDFKCQRKENFRTHYTLTPCSSIKIVR 60
           MALSS FLTPTDWH  SLSSNLLSGSPLWLHSKVDFKCQRKENF THYTLTPCSSIKIVR
Sbjct: 1   MALSSRFLTPTDWH-ASLSSNLLSGSPLWLHSKVDFKCQRKENFITHYTLTPCSSIKIVR 60

Query: 61  SRSLDRHAVKHNKTRFVQKLIILLLSKPKHYIPLHILSKCRGYLSLPRPRSLLSMIHRYP 120
           SRSLDRHAVKHNKTRFVQKLIILLLSKPKHYIPLHILSKCRGYLSLPRPRSLLSMIHRYP
Sbjct: 61  SRSLDRHAVKHNKTRFVQKLIILLLSKPKHYIPLHILSKCRGYLSLPRPRSLLSMIHRYP 120

Query: 121 SIFELFSIPYPPTPLNATKLYPQLCVRLTPAAASIAKQDSDLKLVISNTLAEKLQKLLML 180
           SIFELFSIPYPPTPLNATKLYPQLCVRLT AAASIAKQDSDLKLVISNTLAEKLQKLLML
Sbjct: 121 SIFELFSIPYPPTPLNATKLYPQLCVRLTAAAASIAKQDSDLKLVISNTLAEKLQKLLML 180

Query: 181 SSHHRILLSKLVHLAPDLSMPPNFRSRLCNDYPEKFRTVDTSYGRALELVSWDPELAKPL 240
           SSHHRILLSKLVHLAPDLSMPPNFRSRLCNDYPEKFRTVDTSYGRALELVSWDPELAKPL
Sbjct: 181 SSHHRILLSKLVHLAPDLSMPPNFRSRLCNDYPEKFRTVDTSYGRALELVSWDPELAKPL 240

Query: 241 PYIQVPSRELIVDRPLKFNLLRLRKGLNLKRTHQEFLIKFRDLPDVCPYKTPASELAKES 300
           P IQVPSRELIVDRPLKFNLLRLRKGLNLKRTHQEFLIKFRDLPD+CPYKTPASELAKES
Sbjct: 241 PCIQVPSRELIVDRPLKFNLLRLRKGLNLKRTHQEFLIKFRDLPDICPYKTPASELAKES 300

Query: 301 LESEKRACAVVREVLGMMIEKRTLIDHLTHFRKDFGLPNKLRGMIVRHPELFYVSLKGQR 360
           LESEKRACAVVREVLGMMIEKRTLIDHLTHFRKDFGLPNKLRGMIVRHPELFYVSLKGQR
Sbjct: 301 LESEKRACAVVREVLGMMIEKRTLIDHLTHFRKDFGLPNKLRGMIVRHPELFYVSLKGQR 360

Query: 361 DSVFLVEGFDDKGVLLEKDETLAIKNQWMTLLKEGKRMRREKKKAQIYDSKYGNDHANDN 420
           DSVFLVEGFDDKG LLEKDETLAIKN+WM LLKEGKRMRREKKKAQIYDSKYGNDH N+N
Sbjct: 361 DSVFLVEGFDDKGALLEKDETLAIKNRWMALLKEGKRMRREKKKAQIYDSKYGNDHENNN 420

Query: 421 HDHEMESDYDDDYDDGFESLFQYEDLDFEDENSGLPSIWSNGDFWTTSNVAISNDADGGH 480
           HDHEME+DYDD+YDDGFESLFQYEDLDFEDENSG+PSIWSNGDFWTT+NV ISND DG H
Sbjct: 421 HDHEMENDYDDNYDDGFESLFQYEDLDFEDENSGVPSIWSNGDFWTTNNVDISNDTDGSH 480

Query: 481 IEPW 485
           IEPW
Sbjct: 481 IEPW 483

[Close]
BLAST of PI0027413 vs. NCBI nr
Match: XP_008453967.1 (PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucumis melo] >XP_016901446.1 PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucumis melo] >XP_016901447.1 PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucumis melo] >TYK16978.1 protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucumis melo var. makuwa])

HSP 1 Score: 924.5 bits (2388), Expect = 3.8e-265
Identity = 464/484 (95.87%), Postives = 470/484 (97.11%), Query Frame = 0 

Query: 1   MALSSHFLTPTDWHVTSLSSNLLSGSPLWLHSKVDFKCQRKENFRTHYTLTPCSSIKIVR 60
           MALSSHFLTP DWH  SLSSNLLSGSPLWLHSKVD KCQRKENF THYTLTPCSSIKIVR
Sbjct: 1   MALSSHFLTPADWH-ASLSSNLLSGSPLWLHSKVDLKCQRKENFITHYTLTPCSSIKIVR 60

Query: 61  SRSLDRHAVKHNKTRFVQKLIILLLSKPKHYIPLHILSKCRGYLSLPRPRSLLSMIHRYP 120
           SRSLDRHAVKHNKTRFVQKLIILLLSKPKHYIPLHILSKCRGYLSLPRPRSLLSMIHRYP
Sbjct: 61  SRSLDRHAVKHNKTRFVQKLIILLLSKPKHYIPLHILSKCRGYLSLPRPRSLLSMIHRYP 120

Query: 121 SIFELFSIPYPPTPLNATKLYPQLCVRLTPAAASIAKQDSDLKLVISNTLAEKLQKLLML 180
           SIFELFSIPYPPTPLNATKLYPQLCVRLT AAASIAKQDSDLKLVISNTLAEKLQKLLML
Sbjct: 121 SIFELFSIPYPPTPLNATKLYPQLCVRLTAAAASIAKQDSDLKLVISNTLAEKLQKLLML 180

Query: 181 SSHHRILLSKLVHLAPDLSMPPNFRSRLCNDYPEKFRTVDTSYGRALELVSWDPELAKPL 240
           SSHHRILLSKLVHLAPDLSMPPNFRSRLCNDYPEKFRTVDTSYGRALELVSWDPELAKPL
Sbjct: 181 SSHHRILLSKLVHLAPDLSMPPNFRSRLCNDYPEKFRTVDTSYGRALELVSWDPELAKPL 240

Query: 241 PYIQVPSRELIVDRPLKFNLLRLRKGLNLKRTHQEFLIKFRDLPDVCPYKTPASELAKES 300
           P IQVPSRELIVDRPLKFNLLRLRKGLNLKRTHQEFLIKFRDLPDVCPYKTPASELAKES
Sbjct: 241 PCIQVPSRELIVDRPLKFNLLRLRKGLNLKRTHQEFLIKFRDLPDVCPYKTPASELAKES 300

Query: 301 LESEKRACAVVREVLGMMIEKRTLIDHLTHFRKDFGLPNKLRGMIVRHPELFYVSLKGQR 360
           LESEKRACAVVREVLGMMIEKRTLIDHLTHFRKDFGLPNKLRGMIVRHPELFYVSLKGQR
Sbjct: 301 LESEKRACAVVREVLGMMIEKRTLIDHLTHFRKDFGLPNKLRGMIVRHPELFYVSLKGQR 360

Query: 361 DSVFLVEGFDDKGVLLEKDETLAIKNQWMTLLKEGKRMRREKKKAQIYDSKYGNDHANDN 420
           DSVFLVEGFDDKG LLEKDETLAIKN+WM LLKEGKRMRREKKKAQIYDSKYGNDH N+N
Sbjct: 361 DSVFLVEGFDDKGALLEKDETLAIKNRWMALLKEGKRMRREKKKAQIYDSKYGNDHENNN 420

Query: 421 HDHEMESDYDDDYDDGFESLFQYEDLDFEDENSGLPSIWSNGDFWTTSNVAISNDADGGH 480
           HDHEME+DYDD+YDDGFESLFQYEDLDFEDENSG+PSIWSNGDFWTT+NV ISND D  H
Sbjct: 421 HDHEMENDYDDNYDDGFESLFQYEDLDFEDENSGVPSIWSNGDFWTTNNVDISNDTDESH 480

Query: 481 IEPW 485
           IEPW
Sbjct: 481 IEPW 483

[Close]
BLAST of PI0027413 vs. NCBI nr
Match: XP_038904265.1 (protein WHAT'S THIS FACTOR 1, chloroplastic [Benincasa hispida] >XP_038904305.1 protein WHAT'S THIS FACTOR 1, chloroplastic [Benincasa hispida])

HSP 1 Score: 896.0 bits (2314), Expect = 1.5e-256
Identity = 447/484 (92.36%), Postives = 461/484 (95.25%), Query Frame = 0 

Query: 1   MALSSHFLTPTDWHVTSLSSNLLSGSPLWLHSKVDFKCQRKENFRTHYTLTPCSSIKIVR 60
           M LSSHFLTPTDWHVT LSSNLL G+PLWLHS V  K QRKENF T YTLTPCSS+KIVR
Sbjct: 1   MVLSSHFLTPTDWHVTLLSSNLLCGNPLWLHSNVSCKYQRKENFETRYTLTPCSSLKIVR 60

Query: 61  SRSLDRHAVKHNKTRFVQKLIILLLSKPKHYIPLHILSKCRGYLSLPRPRSLLSMIHRYP 120
           SRSLDRHAVKHNKTRFVQKLIILLLSKPKHYIPLHILSKCRGYLSLPRPRSLLSMIHRYP
Sbjct: 61  SRSLDRHAVKHNKTRFVQKLIILLLSKPKHYIPLHILSKCRGYLSLPRPRSLLSMIHRYP 120

Query: 121 SIFELFSIPYPPTPLNATKLYPQLCVRLTPAAASIAKQDSDLKLVISNTLAEKLQKLLML 180
           SIFELFSIPYPPTPLNATK+YPQLCVRLTPAAAS+AKQDSDLKLVISNTLAEKLQKLLML
Sbjct: 121 SIFELFSIPYPPTPLNATKVYPQLCVRLTPAAASLAKQDSDLKLVISNTLAEKLQKLLML 180

Query: 181 SSHHRILLSKLVHLAPDLSMPPNFRSRLCNDYPEKFRTVDTSYGRALELVSWDPELAKPL 240
           SSHHRILLSKLVHLAPDLSMPPNFRSRLCNDYPEKFRTVDTSYGRALELVSWDPELAKPL
Sbjct: 181 SSHHRILLSKLVHLAPDLSMPPNFRSRLCNDYPEKFRTVDTSYGRALELVSWDPELAKPL 240

Query: 241 PYIQVPSRELIVDRPLKFNLLRLRKGLNLKRTHQEFLIKFRDLPDVCPYKTPASELAKES 300
           P +QVPSRELIVDRPLKFNLLRLRKGLNLKR HQEFLIKFRDLPDVCPYKTPASELAKES
Sbjct: 241 PCLQVPSRELIVDRPLKFNLLRLRKGLNLKRAHQEFLIKFRDLPDVCPYKTPASELAKES 300

Query: 301 LESEKRACAVVREVLGMMIEKRTLIDHLTHFRKDFGLPNKLRGMIVRHPELFYVSLKGQR 360
           LESEKRACAVVREVLGMMIEKRTLIDHLTHFRKDFGLPNKLRGMIVRHPELFYVSLKGQR
Sbjct: 301 LESEKRACAVVREVLGMMIEKRTLIDHLTHFRKDFGLPNKLRGMIVRHPELFYVSLKGQR 360

Query: 361 DSVFLVEGFDDKGVLLEKDETLAIKNQWMTLLKEGKRMRREKKKAQIYDSKYGNDHANDN 420
           DSVFLVEGFD+KGVL++KDETLAIKNQWM LL EGKRMR+EKKKA+ YDSKYGN+H NDN
Sbjct: 361 DSVFLVEGFDEKGVLVKKDETLAIKNQWMKLLMEGKRMRQEKKKARKYDSKYGNEHKNDN 420

Query: 421 HDHEMESDYDDDYDDGFESLFQYEDLDFEDENSGLPSIWSNGDFWTTSNVAISNDADGGH 480
           HDHEME+D+DDDYDDGFESLFQYEDLDFEDE S LPS W NGDFW T+NV I NDADGG 
Sbjct: 421 HDHEMETDFDDDYDDGFESLFQYEDLDFEDERSDLPSNWLNGDFWITNNVDIINDADGGR 480

Query: 481 IEPW 485
           IEPW
Sbjct: 481 IEPW 484

[Close]
BLAST of PI0027413 vs. NCBI nr
Match: XP_022955645.1 (protein WHAT'S THIS FACTOR 1 [Cucurbita moschata] >XP_022955646.1 protein WHAT'S THIS FACTOR 1 [Cucurbita moschata] >KAG7018490.1 Protein ROOT PRIMORDIUM DEFECTIVE 1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 865.1 bits (2234), Expect = 2.8e-247
Identity = 436/485 (89.90%), Postives = 456/485 (94.02%), Query Frame = 0 

Query: 1   MALSSHFLTPTDWHVTSLSSNLLSGSPLWLHSKVDFKCQRKENFRTHYTLTPCSSIKIVR 60
           MALSS FLTP DWHVTSLSSNLL G+PLWLHS V  K QRKENF+T YTLTP +S+KIVR
Sbjct: 1   MALSSQFLTPRDWHVTSLSSNLLCGTPLWLHSNVGCKYQRKENFKTCYTLTPRASVKIVR 60

Query: 61  SRSLDRHAVKHNKTRFVQKLIILLLSKPKHYIPLHILSKCRGYLSLPRPRSLLSMIHRYP 120
           SR LDRHAVKHNKTRFVQKLIILLLSKPKHYIP+HILSKCRGYLSLP+PRSLLSMIHRYP
Sbjct: 61  SRPLDRHAVKHNKTRFVQKLIILLLSKPKHYIPIHILSKCRGYLSLPKPRSLLSMIHRYP 120

Query: 121 SIFELFSIPYPPTPLNATKLYPQLCVRLTPAAASIAKQDSDLKLVISNTLAEKLQKLLML 180
           SIFELFSIPYPPTPLNATKLYPQLCVRLTP AAS+AKQDS+LKLVISNTLAEKLQKLLML
Sbjct: 121 SIFELFSIPYPPTPLNATKLYPQLCVRLTPVAASLAKQDSNLKLVISNTLAEKLQKLLML 180

Query: 181 SSHHRILLSKLVHLAPDLSMPPNFRSRLCNDYPEKFRTVDTSYGRALELVSWDPELAKPL 240
           SSHHRILLSKLVHLAPDLSMPPNFRSRLCNDYPEKFRTVDTSYGRALELV WDPELAKPL
Sbjct: 181 SSHHRILLSKLVHLAPDLSMPPNFRSRLCNDYPEKFRTVDTSYGRALELVFWDPELAKPL 240

Query: 241 PYIQVPSRELIVDRPLKFNLLRLRKGLNLKRTHQEFLIKFRDLPDVCPYKTPASELAKES 300
           P +QV SRELIVDRPLKFNLL+LRKGLNLKR HQEFLIKFRDLPDVCPYKTPASELAKES
Sbjct: 241 PCLQVSSRELIVDRPLKFNLLKLRKGLNLKRAHQEFLIKFRDLPDVCPYKTPASELAKES 300

Query: 301 LESEKRACAVVREVLGMMIEKRTLIDHLTHFRKDFGLPNKLRGMIVRHPELFYVSLKGQR 360
           LESEKRACAVVREVLGMMIEKRTLIDHLTHFRKDFGLPNKLRGMIVRHPELFYVSLKGQR
Sbjct: 301 LESEKRACAVVREVLGMMIEKRTLIDHLTHFRKDFGLPNKLRGMIVRHPELFYVSLKGQR 360

Query: 361 DSVFLVEGFDDKGVLLEKDETLAIKNQWMTLLKEGKRMRREKKKAQIYDSKYGNDHANDN 420
           DSVFLVEGF+DKG L+EKDETLAIKNQWM LL EGKRMRREK+KAQIYDS+YGNDH N +
Sbjct: 361 DSVFLVEGFNDKGHLIEKDETLAIKNQWMKLLMEGKRMRREKRKAQIYDSRYGNDHENHS 420

Query: 421 HDHEMESDYDDDYDDGFESLFQYEDLDFEDENSGLPSIWSNGDFWTTSNVA-ISNDADGG 480
           HDHEME+DYDDDY+DGFESLFQYEDLDFEDE S LPS  SNGDFWTT+N A I N  +GG
Sbjct: 421 HDHEMETDYDDDYEDGFESLFQYEDLDFEDEESDLPSNRSNGDFWTTNNAADIINGENGG 480

Query: 481 HIEPW 485
           HI+PW
Sbjct: 481 HIKPW 485

[Close]
BLAST of PI0027413 vs. TAIR 10
Match: AT5G62990.1 (Ubiquitin carboxyl-terminal hydrolase family protein )

HSP 1 Score: 504.6 bits (1298), Expect = 8.8e-143
Identity = 274/442 (61.99%), Postives = 329/442 (74.43%), Query Frame = 0 

Query: 53  CSSIKIVRSRSLDRHAVKHNKTRFVQKLIILLLSKPKHYIPLHILSKCRGYLSLPRPRSL 112
           CS+ KIVRS SLDRH VK N+ RFVQKL  LLLSKPKHYIP+ IL KCR YL +  P ++
Sbjct: 54  CSAHKIVRSPSLDRHVVKQNRVRFVQKLNTLLLSKPKHYIPIEILYKCRSYLCIENPLAI 113

Query: 113 LSMIHRYPSIFELFSIPYPPTPLNATKLYPQLCVRLTPAAASIAKQDSDLKLVISNTLAE 172
           LSMI RYP+IFELF+ P P  P+NATK   QLCVRLT AA+S+A Q+ +LK  IS+ LA 
Sbjct: 114 LSMIRRYPTIFELFTTPTPHLPMNATKPLSQLCVRLTSAASSLAMQELNLKSEISDKLAT 173

Query: 173 KLQKLLMLSSHHRILLSKLVHLAPDLSMPPNFRSRLCNDYPEKFRTVDTSYGRALELVSW 232
           KLQKLLMLSSH R+LLSKLVH+APD   PPNFRSRLCNDYP+KF+TVDTSYGRALELVS 
Sbjct: 174 KLQKLLMLSSHRRLLLSKLVHIAPDFGFPPNFRSRLCNDYPDKFKTVDTSYGRALELVSS 233

Query: 233 DPELAKPLPYIQVPSRELIVDRPLKFNLLRLRKGLNLKRTHQEFLIKFRDLPDVCPYKTP 292
           DPELA  +P  +V  R LIVDRPLKF  L LR+GLNLKR HQ FLIKFR+ PDVCPYK  
Sbjct: 234 DPELANQMPSPEV-DRGLIVDRPLKFKRLNLRRGLNLKRRHQGFLIKFRESPDVCPYKMS 293

Query: 293 ASELAKESLESEKRACAVVREVLGMMIEKRTLIDHLTHFRKDFGLPNKLRGMIVRHPELF 352
           +  LA ES+E+EKRACAVVREVLG+ +EKRTLIDHLTHFRK+F LPNKLR +IVRHPELF
Sbjct: 294 SDYLASESIEAEKRACAVVREVLGLTVEKRTLIDHLTHFRKEFSLPNKLRDLIVRHPELF 353

Query: 353 YVSLKGQRDSVFLVEGFDDKGVLLEKDETLAIKNQWMTLLKEGKRMRREKKK--AQIYDS 412
           YVS+KG RDSVFLVE ++D G LL+KDE L I+ + + L++EGKR+RRE+++  A + D 
Sbjct: 354 YVSIKGMRDSVFLVEAYNDNGDLLDKDERLVIRERLIDLIQEGKRIRRERRRKGATLGDK 413

Query: 413 KYGNDHANDNHDHEMESDYDDDYDDGFESLFQYEDLDFE---DENSGLPSIWSNG---DF 472
                  +D    + +SD DD+Y+DGFE+LF  EDL  E   DE         NG   ++
Sbjct: 414 SVEEKRKDDETIDDYDSDLDDEYEDGFENLFDSEDLGVEYHFDEEDDDDEAGVNGESVEY 473

Query: 473 WT--TSNVAISNDADGGHIEPW 485
           W+   S+   S+D     +E W
Sbjct: 474 WSRKLSSSGSSSDEANSAVESW 494

[Close]
BLAST of PI0027413 vs. TAIR 10
Match: AT4G01037.1 (Ubiquitin carboxyl-terminal hydrolase family protein )

HSP 1 Score: 222.2 bits (565), Expect = 8.8e-58
Identity = 139/392 (35.46%), Postives = 212/392 (54.08%), Query Frame = 0 

Query: 54  SSIKIVRSRSLDRHAVKHNKTRFVQKLIILLLSKPKHYIPLHILSKCRGYLSLPRPRSLL 113
           +++K  +  + D    +  K + V  +  +L+S+P   + L  L K R  L L + R  +
Sbjct: 74  AAVKRRKELTFDSVVQRDKKLKLVLNIRKILVSQPDRMMSLRGLGKYRRDLGLKKRRRFI 133

Query: 114 SMIHRYPSIFELFSIPYPPTPLNATKLYPQLCVRLTPAAASIAKQDSDLKLVISNTLAEK 173
           +++ +YP +FE+             +    L  ++T  A  +   +  ++  + + L  K
Sbjct: 134 ALLRKYPGVFEI-----------VEEGAYSLRFKMTSEAERLYLDEMRIRNELEDVLVVK 193

Query: 174 LQKLLMLSSHHRILLSKLVHLAPDLSMPPNFRSRLCNDYPEKFRTVDTSYGRALELVSWD 233
           L+KL+M+S   RILL K+ HL  DL +P  FR  +C  YP+ FR V T  G ALEL  WD
Sbjct: 194 LRKLVMMSIDKRILLEKISHLKTDLGLPLEFRDTICQRYPQYFRVVPTPRGPALELTHWD 253

Query: 234 PELAKPLPYI--------QVPSRELIVDRPLKFNLLRLRKGLNLKRTHQEFLIKFRDLPD 293
           PELA     +        +   R LI+DRP KFN ++L +GLNL ++    + +FRD+  
Sbjct: 254 PELAVSAAELSEDDNRTRESEERNLIIDRPPKFNRVKLPRGLNLSKSETRKISQFRDMQY 313

Query: 294 VCPYKTPASELAKESLESEKRACAVVREVLGMMIEKRTLIDHLTHFRKDFGLPNKLRGMI 353
           + PYK   S L   +LE EK AC V+ E+L +  EKRTL+DHLTHFR++F    +LRGM+
Sbjct: 314 ISPYK-DFSHLRSGTLEKEKHACGVIHELLSLTTEKRTLVDHLTHFREEFRFSQQLRGML 373

Query: 354 VRHPELFYVSLKGQRDSVFLVEGFDDKGVLLEKDETLAIKNQWMTLL-------KEGKRM 413
           +RHP+LFYVSLKG+RDSVFL E + +   L++KD    +K +   L+       + G R 
Sbjct: 374 IRHPDLFYVSLKGERDSVFLREAYRN-SELIDKDPLTLVKEKMRALVSVPRFPRRGGPRK 433

Query: 414 RREKKKAQIYDSKYGNDHANDNHDHEMESDYD 431
             E ++ +I  S    +   +  D E  SD D
Sbjct: 434 DEEGREVEIDGSDADGEEEEEESDAEEWSDVD 452

[Close]
BLAST of PI0027413 vs. TAIR 10
Match: AT3G63090.1 (Ubiquitin carboxyl-terminal hydrolase family protein )

HSP 1 Score: 125.9 bits (315), Expect = 8.6e-29
Identity = 106/358 (29.61%), Postives = 174/358 (48.60%), Query Frame = 0 

Query: 54  SSIKIV--RSRSLDRHAVKHNKTRFVQKLIILLLSKPKHYIPLHILSKCRGYLSLPRPRS 113
           SS+K+V  +   LD    +  + +   +++  +L++P   IPL  L K R  L L     
Sbjct: 32  SSLKVVWKKDTRLDEAIEQDKRYKLCARVVKEVLNEPGQVIPLRYLEKRRERLRLTFKAK 91

Query: 114 LLSMIHRYPSIFELFSIPYPPTPLNATKLYPQLCVRLTPAAASIAKQDSDLKLVISNTLA 173
             S +   PS+FE++     P      K  P   +R TP   +   ++  +       L 
Sbjct: 92  --SFVEMNPSLFEIYYDRIKP------KSDPVQFLRPTPRLRAFLDEEQRIYSENEPLLV 151

Query: 174 EKLQKLLMLSSHHRILLSKLVHLAPDLSMPPNFRSRLCNDYPEKFR-TVDTSYGRA-LEL 233
            KL +LLM++    I   KLVH+  D   P +F  +L   YP  FR T     G++ LEL
Sbjct: 152 SKLCQLLMMAKDKVISADKLVHVKRDFGFPNDFLMKLVQKYPNYFRLTGLPEEGKSFLEL 211

Query: 234 VSWDPELAKPLPYIQVPSRELIVDRPLKFNL-LRLRKGLNLKRTHQEFLIKFRDLPDVCP 293
           VSW+P+ AK    ++     L     ++ N  ++L  G  L++  +E+   + +   + P
Sbjct: 212 VSWNPDFAKSKIELRAEDETLKTGVRIRPNYNVKLPSGFFLRKEMREWTRDWLEQDYISP 271

Query: 294 YKTPASELAKESLESEKRACAVVREVLGMMIEKRTLIDHLTHFRKDFGLPNKLRGMIVRH 353
           Y+   S L + S E EKR   VV E+L + + KR  +  L  F  +F   N    +  RH
Sbjct: 272 YE-DVSHLDQASKEMEKRTVGVVHELLSLSLLKRVPVPTLGKFCDEFRFSNAFSSVFTRH 331

Query: 354 PELFYVSLKGQRDSVFLVEGFDDKGVLLEKDETLAIKNQWMTLLKEGKRMRREKKKAQ 407
             +FY+SLKG   +  L E + D   L+++D  LAIK++++ LL+EG + R+++ K Q
Sbjct: 332 SGIFYLSLKGGIKTAVLREAYKD-DELVDRDPLLAIKDKFLRLLEEGWQERKDRLKLQ 379

[Close]
BLAST of PI0027413 vs. TAIR 10
Match: AT5G48040.1 (Ubiquitin carboxyl-terminal hydrolase family protein )

HSP 1 Score: 122.1 bits (305), Expect = 1.2e-27
Identity = 111/387 (28.68%), Postives = 185/387 (47.80%), Query Frame = 0 

Query: 56  IKIVRSRSLDRHAVKHNKTRFVQKLIILLLSKPKHYIPLHILSKCRGYLSLPRPRSLLSM 115
           +K V+ R LD   V+    R V  L+ ++ + P   +P+  L   RG L LP+   L + 
Sbjct: 37  LKWVKDRELDAVVVREKHLRAVCNLVSVISASPDLRLPIFKLLPHRGQLGLPQELKLSAF 96

Query: 116 IHRYPSIFELFSIPYPPTPLNATKLYPQLCVRLTPAAASIAKQDSDLKLVISNTLAEKLQ 175
           I RYP+IF    + +       T +    C  LT     +  ++ D+  V    +  +L 
Sbjct: 97  IRRYPNIF----VEHCYWDSAGTSV---PCFGLTRETIDLYYEEVDVSRVNERDVLVRLC 156

Query: 176 KLLMLSSHHRILLSKLVHLAPDLSMPPNFRSRLCNDYPEKFRTVDTSYG-RALELVSWDP 235
           KLLML+    + L  + HL  DL +P ++R  L   +P+ F  V  S     L+L+ WD 
Sbjct: 157 KLLMLTCERTLSLHSIDHLRWDLGLPYDYRDSLITKHPDLFSLVKLSSDLDGLKLIHWDE 216

Query: 236 ELAKPLPYIQVPSRELIVDRPLKFNLLRLRKGLNLKRTHQEFLIKFRDLPDVCPYKTPAS 295
            LA      Q+  RE + +       ++  +G  LKR   E+L +++ LP   PY   AS
Sbjct: 217 HLA----VSQMQLREDVGNDERMAFPVKFTRGFGLKRKSIEWLQEWQRLPYTSPY-VDAS 276

Query: 296 ELAKESLESEKRACAVVREVLGMMIEKRTLIDHLTHFRKDFGLPNKLRGMIVRHPELFYV 355
            L   +  SEKR   V  E+L + I K+T   ++++ RK F LP K   +  RHP +FY+
Sbjct: 277 HLDPRTDLSEKRNVGVFHELLHLTIGKKTERKNVSNLRKPFALPQKFTKVFERHPGIFYI 336

Query: 356 SLKGQRDSVFLVEGFDDKGVLLEKDETLAIKNQWMTLLKEG--KRMRREKKKAQIYDSKY 415
           S+K    +V L E +D +  L+EK   + ++ ++  ++ EG   R R   +K+   D + 
Sbjct: 337 SMKCDTQTVILREAYDRRH-LIEKHPLVEVREKFANMMNEGFLDRSRGLYQKSVEADLEK 396

Query: 416 GNDHANDNHDHEMESDYDDDYDDGFES 440
            N   +     + E + D++   G++S
Sbjct: 397 NNIKTSYPVWSDEEEELDNNLISGYDS 410

[Close]
BLAST of PI0027413 vs. TAIR 10
Match: AT5G21970.1 (Ubiquitin carboxyl-terminal hydrolase family protein )

HSP 1 Score: 115.2 bits (287), Expect = 1.5e-25
Identity = 112/421 (26.60%), Postives = 189/421 (44.89%), Query Frame = 0 

Query: 54  SSIKIVRSRSLDRHA----VKHNKTRFVQKLIIL---LLSKPKHYIPLHILSKCRGYLSL 113
           +S K V+ RS ++      +   K +   K+I L   L  +    + +    + R  ++L
Sbjct: 44  TSSKRVQDRSREKRVQELEIATEKWKIASKVIFLMEVLKGERDMIMTVRSFEQYRRQINL 103

Query: 114 PRPRSLLSMIHRYPSIFELFSIPYPPTPLNATKLYPQLCVRLTPAAASIAKQDSDLKLVI 173
           P+P  +   I + P +FEL+                 L   LT     +  +   L    
Sbjct: 104 PKPHKISDFIRKSPKLFELYK-----------DQRGVLWCGLTEGGEDLLDEHDKLLEEN 163

Query: 174 SNTLAEKLQKLLMLSSHHRILLSKLVHLAPDLSMPPNFRSRLCNDYPEKFRTVDTSYGRA 233
            +  AE + + LM+S   ++ L K+VH   D  +P +FR     ++P+ F+ V    G  
Sbjct: 164 GDKAAEHVTRCLMMSVDKKLPLDKIVHFRRDFGLPLDFRINWVYNFPQHFKVVKLGDGEE 223

Query: 234 -LELVSWDPELAKPLPYIQVPSRELIVDRPLKFNLLRLRKGLNLKRTHQEF------LIK 293
            LELVSW+P  A  +  ++  +  +  D   K  +L L   +    ++++       +  
Sbjct: 224 YLELVSWNPAWA--ITELEKKTLGITEDCEHKPGMLSLAFPMKFPPSYKKMYRYRGKIEH 283

Query: 294 FRDLPDVCPYKTPASELAKESLESEKRACAVVREVLGMMIEKRTLIDHLTHFRKDFGLPN 353
           F+    + PY   A  L   S E +KRA AV+ E+L   +EKR + DHLTHFR++F +P 
Sbjct: 284 FQKRSYLSPY-ADARGLEAGSKEFDKRAIAVMHELLSFTLEKRLVTDHLTHFRREFVMPQ 343

Query: 354 KLRGMIVRHPELFYVSLKGQRDSVFLVEGFDDKGVLLEKDETLAIKNQWMTLLKEGKRMR 413
           KL  + ++H  +FYVS +G+R SVFL EG++    L+EK   +     W   L +    R
Sbjct: 344 KLMRIFLKHCGIFYVSERGKRFSVFLTEGYEGP-ELIEKCPLIL----WKEKLLKFTGYR 403

Query: 414 REKKKAQIYDSKYGNDHANDNHDHEM--ESDYDDDYDDGFESLFQYEDLDFEDENSGLPS 459
             K+  Q Y          D  + E+      D+D   GFE    Y+D+  +D+   +  
Sbjct: 404 GRKRDIQTYSDTL------DMEERELLESGSGDEDLSVGFEKDGDYDDVVTDDDEMDIGE 439

The following BLAST results are available for this feature:
BLAST of PI0027413 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
B6TTV83.5e-5936.30Protein WHAT'S THIS FACTOR 1, chloroplastic OS=Zea mays OX=4577 GN=WTF1 PE=1 SV=... [more]
Q65XL55.0e-5836.32Protein WHAT'S THIS FACTOR 1 homolog, chloroplastic OS=Oryza sativa subsp. japon... [more]
A0MFS51.2e-5635.46Protein WHAT'S THIS FACTOR 1 homolog, chloroplastic OS=Arabidopsis thaliana OX=3... [more]
Q689D63.3e-1724.00Protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Arabidopsis thaliana OX=3702 GN=RPD1 PE=1... [more]
Q9ZUZ64.3e-1723.92Protein WHAT'S THIS FACTOR 9, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=W... [more]
BLAST of PI0027413 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KU861.0e-27196.90PORR domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G015830 PE=4 S... [more]
A0A5A7TP081.3e-26696.07Protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6... [more]
A0A1S3BYB21.9e-26595.87protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Cucumis melo OX=3656 GN=LOC103494529 PE=4... [more]
A0A5D3D0F71.9e-26595.87Protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5... [more]
A0A6J1GVP11.3e-24789.90protein WHAT'S THIS FACTOR 1 OS=Cucurbita moschata OX=3662 GN=LOC111457587 PE=4 ... [more]
BLAST of PI0027413 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004152293.12.1e-27196.90protein WHAT'S THIS FACTOR 1, chloroplastic [Cucumis sativus] >XP_031739932.1 pr... [more]
KAA0044608.12.7e-26696.07protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucumis melo var. makuwa][more]
XP_008453967.13.8e-26595.87PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucumis melo] >XP_016901446.1 PR... [more]
XP_038904265.11.5e-25692.36protein WHAT'S THIS FACTOR 1, chloroplastic [Benincasa hispida] >XP_038904305.1 ... [more]
XP_022955645.12.8e-24789.90protein WHAT'S THIS FACTOR 1 [Cucurbita moschata] >XP_022955646.1 protein WHAT'S... [more]
BLAST of PI0027413 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G62990.18.8e-14361.99Ubiquitin carboxyl-terminal hydrolase family protein [more]
AT4G01037.18.8e-5835.46Ubiquitin carboxyl-terminal hydrolase family protein [more]
AT3G63090.18.6e-2929.61Ubiquitin carboxyl-terminal hydrolase family protein [more]
AT5G48040.11.2e-2728.68Ubiquitin carboxyl-terminal hydrolase family protein [more]
AT5G21970.11.5e-2526.60Ubiquitin carboxyl-terminal hydrolase family protein [more]
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR021099Plant organelle RNA recognition domainPFAMPF11955PORRcoord: 59..397
e-value: 9.3E-93
score: 310.7
IPR045040PORR familyPANTHERPTHR31476PROTEIN WHAT'S THIS FACTOR 1 HOMOLOG, CHLOROPLASTICcoord: 25..448
NoneNo IPR availablePANTHERPTHR31476:SF2UBIQUITIN CARBOXYL-TERMINAL HYDROLASE FAMILY PROTEINcoord: 25..448

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
PI0027413.1PI0027413.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0008233 peptidase activity
molecular_function GO:0003723 RNA binding