PI0027407 (gene) Melon (PI 482460) v1

Overview


Name	PI0027407
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	AP2/ERF domain-containing transcription factor
Location	chr06: 103586 .. 104058 (-)
RNA-Seq Expression	PI0027407
Synteny	PI0027407

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTGAGTAGCAGCAGCTTGGAAGGGTCATCGTCGGATTTATTTCTTCTGGAGCAGATTCGGCAGCATCTTCTAGAAGACGACTTAGGGAAAGGGAGTACGAATAATAATGTTGAGGATGGAATAATTAGGTATGATATTAGCAGTAGTGGAGCTGGTTGGGAGATGAGTAACAACAACAACAACAATAATATGGTGGATCAAATGTCGTCAATTATTATTAGAGACAATCCGGAGGAGAATTCTCGGCCTCGGCCTCGAGGTTTGCAGTTCAGAGGAGTTAGGAGGAGGCCTTGGGGAAGTACGCGGCAGAAATCAGAGACCCGAGCAGAAAAGGAGCTCGAATATGGCTGGGGACTTACCACACCGCCCAAGACGCTGCTTTAGCTTACGATCGAGCTGCTTTTCAGATGCGAGGTGCCAAAGCAAAACTCAACTTCCCTCACATCATTTCTTCTAACAACTACTCATGA

mRNA sequence

ATGTTGAGTAGCAGCAGCTTGGAAGGGTCATCGTCGGATTTATTTCTTCTGGAGCAGATTCGGCAGCATCTTCTAGAAGACGACTTAGGGAAAGGGAGTACGAATAATAATGTTGAGGATGGAATAATTAGGTATGATATTAGCAGTAGTGGAGCTGGTTGGGAGATGAGTAACAACAACAACAACAATAATATGGTGGATCAAATGTCGTCAATTATTATTAGAGACAATCCGGAGGAGAATTCTCGGCCTCGGCCTCGAGGTTTGCAGTTCAGAGGAGTTAGGAGGAGGCCTTGGGGAAGAGCTCGAATATGGCTGGGGACTTACCACACCGCCCAAGACGCTGCTTTAGCTTACGATCGAGCTGCTTTTCAGATGCGAGGTGCCAAAGCAAAACTCAACTTCCCTCACATCATTTCTTCTAACAACTACTCATGA

Coding sequence (CDS)

ATGTTGAGTAGCAGCAGCTTGGAAGGGTCATCGTCGGATTTATTTCTTCTGGAGCAGATTCGGCAGCATCTTCTAGAAGACGACTTAGGGAAAGGGAGTACGAATAATAATGTTGAGGATGGAATAATTAGGTATGATATTAGCAGTAGTGGAGCTGGTTGGGAGATGAGTAACAACAACAACAACAATAATATGGTGGATCAAATGTCGTCAATTATTATTAGAGACAATCCGGAGGAGAATTCTCGGCCTCGGCCTCGAGGTTTGCAGTTCAGAGGAGTTAGGAGGAGGCCTTGGGGAAGAGCTCGAATATGGCTGGGGACTTACCACACCGCCCAAGACGCTGCTTTAGCTTACGATCGAGCTGCTTTTCAGATGCGAGGTGCCAAAGCAAAACTCAACTTCCCTCACATCATTTCTTCTAACAACTACTCATGA

Protein sequence

MLSSSSLEGSSSDLFLLEQIRQHLLEDDLGKGSTNNNVEDGIIRYDISSSGAGWEMSNNNNNNNMVDQMSSIIIRDNPEENSRPRPRGLQFRGVRRRPWGRARIWLGTYHTAQDAALAYDRAAFQMRGAKAKLNFPHIISSNNYS

Homology

[Close]

BLAST of PI0027407 vs. ExPASy Swiss-Prot
Match: Q8L9K1 (Ethylene-responsive transcription factor 13 OS=Arabidopsis thaliana OX=3702 GN=ERF13 PE=1 SV=2)

HSP 1 Score: 96.3 bits (238), Expect = 3.1e-19
Identity = 45/73 (61.64%), Postives = 55/73 (75.34%), Query Frame = 0


Query: 84  PRPRGLQFRGVRRRPWGR------------ARIWLGTYHTAQDAALAYDRAAFQMRGAKA 143
           PR +G+Q+RGVRRRPWG+            AR+WLGTY T +DAA+AYDRAAFQ+RG+KA
Sbjct: 85  PRQKGMQYRGVRRRPWGKFAAEIRDPKKNGARVWLGTYETPEDAAVAYDRAAFQLRGSKA 144

Query: 144 KLNFPHIISSNNY 145
           KLNFPH+I S  Y
Sbjct: 145 KLNFPHLIGSCKY 157

[Close]

BLAST of PI0027407 vs. ExPASy Swiss-Prot
Match: Q9LW50 (Ethylene-responsive transcription factor 2 OS=Nicotiana sylvestris OX=4096 GN=ERF2 PE=2 SV=1)

HSP 1 Score: 82.8 bits (203), Expect = 3.5e-15
Identity = 39/69 (56.52%), Postives = 50/69 (72.46%), Query Frame = 0


Query: 86  PRGLQFRGVRRRPWGR------------ARIWLGTYHTAQDAALAYDRAAFQMRGAKAKL 143
           P+G  +RGVR+RPWG+            AR+WLGTY TA++AALAYD+AA++MRG+KA L
Sbjct: 98  PKGRHYRGVRQRPWGKFAAEIRDPAKNGARVWLGTYETAEEAALAYDKAAYRMRGSKALL 157

[Close]

BLAST of PI0027407 vs. ExPASy Swiss-Prot
Match: Q40479 (Ethylene-responsive transcription factor 2 OS=Nicotiana tabacum OX=4097 GN=ERF2 PE=2 SV=1)

HSP 1 Score: 82.8 bits (203), Expect = 3.5e-15
Identity = 39/69 (56.52%), Postives = 50/69 (72.46%), Query Frame = 0


Query: 86  PRGLQFRGVRRRPWGR------------ARIWLGTYHTAQDAALAYDRAAFQMRGAKAKL 143
           P+G  +RGVR+RPWG+            AR+WLGTY TA++AALAYD+AA++MRG+KA L
Sbjct: 94  PKGRHYRGVRQRPWGKFAAEIRDPAKNGARVWLGTYETAEEAALAYDKAAYRMRGSKALL 153

[Close]

BLAST of PI0027407 vs. ExPASy Swiss-Prot
Match: Q40476 (Ethylene-responsive transcription factor 1 OS=Nicotiana tabacum OX=4097 GN=ERF1 PE=2 SV=1)

HSP 1 Score: 81.6 bits (200), Expect = 7.8e-15
Identity = 46/105 (43.81%), Postives = 60/105 (57.14%), Query Frame = 0


Query: 53  GWEMSNNNNNNNMVDQMSSIIIRDNPEENSRPR---PRGLQFRGVRRRPWGR-------- 112
           GW   N +      +Q    I+    E  + P    PRG  +RGVRRRPWG+        
Sbjct: 64  GWSPFNFSAGEVKSEQREEEIVVSPAETTAAPAAELPRGRHYRGVRRRPWGKFAAEIRDP 123

Query: 113 ----ARIWLGTYHTAQDAALAYDRAAFQMRGAKAKLNFPHIISSN 143
               AR+WLGTY T ++AA+AYD+AA++MRG+KA LNFPH I  N
Sbjct: 124 AKNGARVWLGTYETDEEAAIAYDKAAYRMRGSKAHLNFPHRIGLN 168

[Close]

BLAST of PI0027407 vs. ExPASy Swiss-Prot
Match: Q84XB3 (Ethylene-responsive transcription factor 1 OS=Solanum lycopersicum OX=4081 GN=ERF1 PE=2 SV=1)

HSP 1 Score: 79.3 bits (194), Expect = 3.9e-14
Identity = 38/70 (54.29%), Postives = 49/70 (70.00%), Query Frame = 0


Query: 85  RPRGLQFRGVRRRPWGR------------ARIWLGTYHTAQDAALAYDRAAFQMRGAKAK 143
           +P+G  +RGVR+RPWG+            AR+WLGTY +A++AALAY +AAF+MRG KA 
Sbjct: 101 QPKGRHYRGVRQRPWGKFAAEIRDPAKNGARVWLGTYESAEEAALAYGKAAFRMRGTKAL 160

[Close]

BLAST of PI0027407 vs. ExPASy TrEMBL
Match: A0A0A0L893 (AP2/ERF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G116730 PE=4 SV=1)

HSP 1 Score: 253.8 bits (647), Expect = 4.2e-64
Identity = 134/155 (86.45%), Postives = 138/155 (89.03%), Query Frame = 0


Query: 3   SSSSLEGSSSDLFLLEQIRQHLLEDDLGKGSTNNNVEDGIIRYDISSSGAGWEMSNNNNN 62
           SSSSLEGSSSDLF LEQIR+HLLEDDLGKGST+NNVEDGIIRYDIS SGAGWEMS  NNN
Sbjct: 5   SSSSLEGSSSDLFHLEQIRRHLLEDDLGKGSTHNNVEDGIIRYDISRSGAGWEMS--NNN 64

Query: 63  NNMVDQMSSIIIRDNPEENSRPRPRGLQFRGVRRRPWGR------------ARIWLGTYH 122
           NNMVDQMSSIIIRDNPEE S+PRPRGLQFRGVRRRPWG+            ARIWLGTYH
Sbjct: 65  NNMVDQMSSIIIRDNPEEKSQPRPRGLQFRGVRRRPWGKYAAEIRDPSKKGARIWLGTYH 124

Query: 123 TAQDAALAYDRAAFQMRGAKAKLNFPHIISSNNYS 146
           TAQDAALAYDRAAFQMRGAKAKLNFPHIISSNNYS
Sbjct: 125 TAQDAALAYDRAAFQMRGAKAKLNFPHIISSNNYS 157

[Close]

BLAST of PI0027407 vs. ExPASy TrEMBL
Match: A0A5D3DAY8 (Putative Ethylene-responsive element binding factor 13 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold291G00160 PE=4 SV=1)

HSP 1 Score: 248.8 bits (634), Expect = 1.4e-62
Identity = 134/153 (87.58%), Postives = 136/153 (88.89%), Query Frame = 0


Query: 3   SSSSLEGSSSDLFLLEQIRQHLLEDDLGKGSTNNNVEDGIIRYDISSSGAGWEMSNNNNN 62
           SSSSLEGSSSDLFLLEQIR+HLLEDDLGKGSTNNNVEDGIIRYDIS SGAGWEMS NNNN
Sbjct: 7   SSSSLEGSSSDLFLLEQIRRHLLEDDLGKGSTNNNVEDGIIRYDISCSGAGWEMS-NNNN 66

Query: 63  NNMVDQMSSIIIRDNPEENSRPRPRGLQFRGVRRRPWGR------------ARIWLGTYH 122
           NNMVDQMSSIIIRDNPEE S  RPRGLQFRGVRRRPWG+            ARIWLGTYH
Sbjct: 67  NNMVDQMSSIIIRDNPEEKS--RPRGLQFRGVRRRPWGKYAAEIRDPSRKGARIWLGTYH 126

Query: 123 TAQDAALAYDRAAFQMRGAKAKLNFPHIISSNN 144
           TAQDAALAYDRAAFQMRGAKAKLNFPHIISSNN
Sbjct: 127 TAQDAALAYDRAAFQMRGAKAKLNFPHIISSNN 156

[Close]

BLAST of PI0027407 vs. ExPASy TrEMBL
Match: A0A6J1IH30 (ethylene-responsive transcription factor 13-like OS=Cucurbita maxima OX=3661 GN=LOC111472899 PE=4 SV=1)

HSP 1 Score: 115.2 bits (287), Expect = 2.4e-22
Identity = 76/155 (49.03%), Postives = 89/155 (57.42%), Query Frame = 0


Query: 3   SSSSLEGSSSDLFLLEQIRQHLLEDDL----GKGSTNNNVEDGIIRYDISSSGAGWEMSN 62
           S+ S   SSS++FLLE IR+HLLED+L    G G    +++ G    DI + G G     
Sbjct: 5   SNCSQGSSSSEVFLLEWIRRHLLEDELDSVGGLGKNTPSLKSGDGVTDIEAPGKG----- 64

Query: 63  NNNNNNMVDQMSSIIIRDNPEENSRPRPRGLQFRGVRRRPWGR------------ARIWL 122
                      SSI              RGLQFRGVRRRPWG+            ARIWL
Sbjct: 65  -----------SSI--------------RGLQFRGVRRRPWGKYAAEIRDPNRKGARIWL 124

Query: 123 GTYHTAQDAALAYDRAAFQMRGAKAKLNFPHIISS 142
           GTY TA++AALAYDRAAFQMRGAKAKLNFPH+I S
Sbjct: 125 GTYQTAEEAALAYDRAAFQMRGAKAKLNFPHMIGS 129

[Close]

BLAST of PI0027407 vs. ExPASy TrEMBL
Match: A0A6J1GF81 (ethylene-responsive transcription factor 1-like OS=Cucurbita moschata OX=3662 GN=LOC111453384 PE=4 SV=1)

HSP 1 Score: 114.4 bits (285), Expect = 4.0e-22
Identity = 77/157 (49.04%), Postives = 90/157 (57.32%), Query Frame = 0


Query: 3   SSSSLEGSSSDLFLLEQIRQHLLEDD------LGKGSTNNNVEDGIIRYDISSSGAGWEM 62
           S+ S   SSS++FLLE IR+HLLED+      LGK + +    DG+   DI + G G   
Sbjct: 5   SNCSQGSSSSEVFLLEWIRRHLLEDELDLVGGLGKNTPSLASSDGVT--DIEAPGKG--- 64

Query: 63  SNNNNNNNMVDQMSSIIIRDNPEENSRPRPRGLQFRGVRRRPWGR------------ARI 122
                        SSI              RGLQFRGVRRRPWG+            ARI
Sbjct: 65  -------------SSI--------------RGLQFRGVRRRPWGKYAAEIRDPNRKGARI 124

Query: 123 WLGTYHTAQDAALAYDRAAFQMRGAKAKLNFPHIISS 142
           WLGTY TA++AALAYDRAAFQMRGAKAKLNFPH+I S
Sbjct: 125 WLGTYQTAEEAALAYDRAAFQMRGAKAKLNFPHMIGS 129

[Close]

BLAST of PI0027407 vs. ExPASy TrEMBL
Match: M5WET5 (AP2/ERF domain-containing protein OS=Prunus persica OX=3760 GN=PRUPE_2G129600 PE=4 SV=1)

HSP 1 Score: 103.6 bits (257), Expect = 7.1e-19
Identity = 69/153 (45.10%), Postives = 90/153 (58.82%), Query Frame = 0


Query: 10  SSSDLFLLEQIRQHLLEDDLGKGST--NNNVEDGIIRYDI-----SSSGAGWEMSNNNNN 69
           +SS+  LLE IRQHLL+DD    +T   +  ED    YD      SSS A + +    + 
Sbjct: 7   TSSNWALLESIRQHLLDDDFENQATFLVSAAEDDAPLYDCAPSTSSSSHAHFGVEGWGDT 66

Query: 70  NNMVDQMSSIIIRDNPEENSRPRPRGLQFRGVRRRPWGR------------ARIWLGTYH 129
             ++D    + ++     N  P P G  FRGVRRRPWG+            AR+WLGTY 
Sbjct: 67  IAILDH--DLDVKVEARVNHAP-PSGRHFRGVRRRPWGKYAAEIRDPKKNGARVWLGTYE 126

Query: 130 TAQDAALAYDRAAFQMRGAKAKLNFPHIISSNN 144
           TA+DA LAYDRAAF+MRG+KAKLNFPH+I S++
Sbjct: 127 TAEDAGLAYDRAAFKMRGSKAKLNFPHLIGSHD 156

[Close]

BLAST of PI0027407 vs. NCBI nr
Match: XP_004134277.2 (ethylene-responsive transcription factor 1 [Cucumis sativus])

HSP 1 Score: 253.8 bits (647), Expect = 8.7e-64
Identity = 134/155 (86.45%), Postives = 138/155 (89.03%), Query Frame = 0


Query: 3   SSSSLEGSSSDLFLLEQIRQHLLEDDLGKGSTNNNVEDGIIRYDISSSGAGWEMSNNNNN 62
           SSSSLEGSSSDLF LEQIR+HLLEDDLGKGST+NNVEDGIIRYDIS SGAGWEMS  NNN
Sbjct: 35  SSSSLEGSSSDLFHLEQIRRHLLEDDLGKGSTHNNVEDGIIRYDISRSGAGWEMS--NNN 94

Query: 63  NNMVDQMSSIIIRDNPEENSRPRPRGLQFRGVRRRPWGR------------ARIWLGTYH 122
           NNMVDQMSSIIIRDNPEE S+PRPRGLQFRGVRRRPWG+            ARIWLGTYH
Sbjct: 95  NNMVDQMSSIIIRDNPEEKSQPRPRGLQFRGVRRRPWGKYAAEIRDPSKKGARIWLGTYH 154

Query: 123 TAQDAALAYDRAAFQMRGAKAKLNFPHIISSNNYS 146
           TAQDAALAYDRAAFQMRGAKAKLNFPHIISSNNYS
Sbjct: 155 TAQDAALAYDRAAFQMRGAKAKLNFPHIISSNNYS 187

[Close]

BLAST of PI0027407 vs. NCBI nr
Match: KAA0048804.1 (putative Ethylene-responsive element binding factor 13 [Cucumis melo var. makuwa] >TYK20756.1 putative Ethylene-responsive element binding factor 13 [Cucumis melo var. makuwa])

HSP 1 Score: 248.8 bits (634), Expect = 2.8e-62
Identity = 134/153 (87.58%), Postives = 136/153 (88.89%), Query Frame = 0


Query: 3   SSSSLEGSSSDLFLLEQIRQHLLEDDLGKGSTNNNVEDGIIRYDISSSGAGWEMSNNNNN 62
           SSSSLEGSSSDLFLLEQIR+HLLEDDLGKGSTNNNVEDGIIRYDIS SGAGWEMS NNNN
Sbjct: 7   SSSSLEGSSSDLFLLEQIRRHLLEDDLGKGSTNNNVEDGIIRYDISCSGAGWEMS-NNNN 66

Query: 63  NNMVDQMSSIIIRDNPEENSRPRPRGLQFRGVRRRPWGR------------ARIWLGTYH 122
           NNMVDQMSSIIIRDNPEE S  RPRGLQFRGVRRRPWG+            ARIWLGTYH
Sbjct: 67  NNMVDQMSSIIIRDNPEEKS--RPRGLQFRGVRRRPWGKYAAEIRDPSRKGARIWLGTYH 126

Query: 123 TAQDAALAYDRAAFQMRGAKAKLNFPHIISSNN 144
           TAQDAALAYDRAAFQMRGAKAKLNFPHIISSNN
Sbjct: 127 TAQDAALAYDRAAFQMRGAKAKLNFPHIISSNN 156

[Close]

BLAST of PI0027407 vs. NCBI nr
Match: KAE8650208.1 (hypothetical protein Csa_010866 [Cucumis sativus])

HSP 1 Score: 189.1 bits (479), Expect = 2.6e-44
Identity = 106/155 (68.39%), Postives = 110/155 (70.97%), Query Frame = 0


Query: 3   SSSSLEGSSSDLFLLEQIRQHLLEDDLGKGSTNNNVEDGIIRYDISSSGAGWEMSNNNNN 62
           SSSSLEGSSSDLF LEQIR+HLLEDDLGKGST+NNVEDG                     
Sbjct: 5   SSSSLEGSSSDLFHLEQIRRHLLEDDLGKGSTHNNVEDG--------------------- 64

Query: 63  NNMVDQMSSIIIRDNPEENSRPRPRGLQFRGVRRRPWGR------------ARIWLGTYH 122
                     IIRDNPEE S+PRPRGLQFRGVRRRPWG+            ARIWLGTYH
Sbjct: 65  ----------IIRDNPEEKSQPRPRGLQFRGVRRRPWGKYAAEIRDPSKKGARIWLGTYH 124

Query: 123 TAQDAALAYDRAAFQMRGAKAKLNFPHIISSNNYS 146
           TAQDAALAYDRAAFQMRGAKAKLNFPHIISSNNYS
Sbjct: 125 TAQDAALAYDRAAFQMRGAKAKLNFPHIISSNNYS 128

[Close]

BLAST of PI0027407 vs. NCBI nr
Match: KAG6597005.1 (Ethylene-responsive transcription factor 13, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 115.9 bits (289), Expect = 2.8e-22
Identity = 77/157 (49.04%), Postives = 89/157 (56.69%), Query Frame = 0


Query: 3   SSSSLEGSSSDLFLLEQIRQHLLEDD------LGKGSTNNNVEDGIIRYDISSSGAGWEM 62
           S  S   SSS++FLLE IR+HLLED+      LGK + +    DG+   DI + G G   
Sbjct: 8   SQGSSSSSSSEVFLLEWIRRHLLEDELDSVGGLGKNTPSLTSSDGVT--DIEAPGKG--- 67

Query: 63  SNNNNNNNMVDQMSSIIIRDNPEENSRPRPRGLQFRGVRRRPWGR------------ARI 122
                        SSI              RGLQFRGVRRRPWG+            ARI
Sbjct: 68  -------------SSI--------------RGLQFRGVRRRPWGKYAAEIRDPNRKGARI 127

Query: 123 WLGTYHTAQDAALAYDRAAFQMRGAKAKLNFPHIISS 142
           WLGTY TA++AALAYDRAAFQMRGAKAKLNFPH+I S
Sbjct: 128 WLGTYQTAEEAALAYDRAAFQMRGAKAKLNFPHMIGS 132

[Close]

BLAST of PI0027407 vs. NCBI nr
Match: XP_022974259.1 (ethylene-responsive transcription factor 13-like [Cucurbita maxima])

HSP 1 Score: 115.2 bits (287), Expect = 4.9e-22
Identity = 76/155 (49.03%), Postives = 89/155 (57.42%), Query Frame = 0


Query: 3   SSSSLEGSSSDLFLLEQIRQHLLEDDL----GKGSTNNNVEDGIIRYDISSSGAGWEMSN 62
           S+ S   SSS++FLLE IR+HLLED+L    G G    +++ G    DI + G G     
Sbjct: 5   SNCSQGSSSSEVFLLEWIRRHLLEDELDSVGGLGKNTPSLKSGDGVTDIEAPGKG----- 64

Query: 63  NNNNNNMVDQMSSIIIRDNPEENSRPRPRGLQFRGVRRRPWGR------------ARIWL 122
                      SSI              RGLQFRGVRRRPWG+            ARIWL
Sbjct: 65  -----------SSI--------------RGLQFRGVRRRPWGKYAAEIRDPNRKGARIWL 124

Query: 123 GTYHTAQDAALAYDRAAFQMRGAKAKLNFPHIISS 142
           GTY TA++AALAYDRAAFQMRGAKAKLNFPH+I S
Sbjct: 125 GTYQTAEEAALAYDRAAFQMRGAKAKLNFPHMIGS 129

[Close]

BLAST of PI0027407 vs. TAIR 10
Match: AT2G44840.1 (ethylene-responsive element binding factor 13 )

HSP 1 Score: 96.3 bits (238), Expect = 2.2e-20
Identity = 45/73 (61.64%), Postives = 55/73 (75.34%), Query Frame = 0


Query: 84  PRPRGLQFRGVRRRPWGR------------ARIWLGTYHTAQDAALAYDRAAFQMRGAKA 143
           PR +G+Q+RGVRRRPWG+            AR+WLGTY T +DAA+AYDRAAFQ+RG+KA
Sbjct: 85  PRQKGMQYRGVRRRPWGKFAAEIRDPKKNGARVWLGTYETPEDAAVAYDRAAFQLRGSKA 144

Query: 144 KLNFPHIISSNNY 145
           KLNFPH+I S  Y
Sbjct: 145 KLNFPHLIGSCKY 157

[Close]

BLAST of PI0027407 vs. TAIR 10
Match: AT2G33710.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 76.6 bits (187), Expect = 1.8e-14
Identity = 45/99 (45.45%), Postives = 64/99 (64.65%), Query Frame = 0


Query: 55  EMSNNNNNNNMVDQMSSIIIRDNPEENSRPRPRGLQFRGVRRRPWGR-----------AR 114
           E++     +++ DQ SS+ +++  + NSR R     +RGVR+RPWG+           AR
Sbjct: 40  ELTGQPIPSSIDDQSSSLTLQE--KSNSRQR----NYRGVRQRPWGKWAAEIRDPNKAAR 99

Query: 115 IWLGTYHTAQDAALAYDRAAFQMRGAKAKLNFPHIISSN 143
           +WLGT+ TA++AALAYD+AAF+ RG KAKLNFP  I  N
Sbjct: 100 VWLGTFDTAEEAALAYDKAAFEFRGHKAKLNFPEHIRVN 132

[Close]

BLAST of PI0027407 vs. TAIR 10
Match: AT2G33710.2 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 76.6 bits (187), Expect = 1.8e-14
Identity = 45/99 (45.45%), Postives = 64/99 (64.65%), Query Frame = 0


Query: 55  EMSNNNNNNNMVDQMSSIIIRDNPEENSRPRPRGLQFRGVRRRPWGR-----------AR 114
           E++     +++ DQ SS+ +++  + NSR R     +RGVR+RPWG+           AR
Sbjct: 40  ELTGQPIPSSIDDQSSSLTLQE--KSNSRQR----NYRGVRQRPWGKWAAEIRDPNKAAR 99

Query: 115 IWLGTYHTAQDAALAYDRAAFQMRGAKAKLNFPHIISSN 143
           +WLGT+ TA++AALAYD+AAF+ RG KAKLNFP  I  N
Sbjct: 100 VWLGTFDTAEEAALAYDKAAFEFRGHKAKLNFPEHIRVN 132

[Close]

BLAST of PI0027407 vs. TAIR 10
Match: AT3G23220.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 74.7 bits (182), Expect = 6.8e-14
Identity = 35/61 (57.38%), Postives = 45/61 (73.77%), Query Frame = 0


Query: 89  LQFRGVRRRPWGR------------ARIWLGTYHTAQDAALAYDRAAFQMRGAKAKLNFP 138
           +++RGVR+RPWG+            AR+WLGT++TA+DAA AYDRAAF MRG +A LNFP
Sbjct: 12  MKYRGVRKRPWGKYAAEIRDSARHGARVWLGTFNTAEDAARAYDRAAFGMRGQRAILNFP 71

[Close]

BLAST of PI0027407 vs. TAIR 10
Match: AT5G13330.1 (related to AP2 6l )

HSP 1 Score: 73.2 bits (178), Expect = 2.0e-13
Identity = 35/73 (47.95%), Postives = 49/73 (67.12%), Query Frame = 0


Query: 75  RDNPEENSRPRPRGLQFRGVRRRPWGR-----------ARIWLGTYHTAQDAALAYDRAA 134
           + +  +  + +PR   +RGVR+RPWG+           AR+WLGT+ TA++AALAYDRAA
Sbjct: 23  KSDQHQPDQDQPRRRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFETAEEAALAYDRAA 82

Query: 135 FQMRGAKAKLNFP 137
            + +G KAKLNFP
Sbjct: 83  LKFKGTKAKLNFP 95

The following BLAST results are available for this feature:

BLAST of PI0027407 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8L9K1	3.1e-19	61.64	Ethylene-responsive transcription factor 13 OS=Arabidopsis thaliana OX=3702 GN=E...	[more]
Q9LW50	3.5e-15	56.52	Ethylene-responsive transcription factor 2 OS=Nicotiana sylvestris OX=4096 GN=ER...	[more]
Q40479	3.5e-15	56.52	Ethylene-responsive transcription factor 2 OS=Nicotiana tabacum OX=4097 GN=ERF2 ...	[more]
Q40476	7.8e-15	43.81	Ethylene-responsive transcription factor 1 OS=Nicotiana tabacum OX=4097 GN=ERF1 ...	[more]
Q84XB3	3.9e-14	54.29	Ethylene-responsive transcription factor 1 OS=Solanum lycopersicum OX=4081 GN=ER...	[more]

BLAST of PI0027407 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L893	4.2e-64	86.45	AP2/ERF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G116730 PE=...	[more]
A0A5D3DAY8	1.4e-62	87.58	Putative Ethylene-responsive element binding factor 13 OS=Cucumis melo var. maku...	[more]
A0A6J1IH30	2.4e-22	49.03	ethylene-responsive transcription factor 13-like OS=Cucurbita maxima OX=3661 GN=...	[more]
A0A6J1GF81	4.0e-22	49.04	ethylene-responsive transcription factor 1-like OS=Cucurbita moschata OX=3662 GN...	[more]
M5WET5	7.1e-19	45.10	AP2/ERF domain-containing protein OS=Prunus persica OX=3760 GN=PRUPE_2G129600 PE...	[more]

BLAST of PI0027407 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004134277.2	8.7e-64	86.45	ethylene-responsive transcription factor 1 [Cucumis sativus]	[more]
KAA0048804.1	2.8e-62	87.58	putative Ethylene-responsive element binding factor 13 [Cucumis melo var. makuwa...	[more]
KAE8650208.1	2.6e-44	68.39	hypothetical protein Csa_010866 [Cucumis sativus]	[more]
KAG6597005.1	2.8e-22	49.04	Ethylene-responsive transcription factor 13, partial [Cucurbita argyrosperma sub...	[more]
XP_022974259.1	4.9e-22	49.03	ethylene-responsive transcription factor 13-like [Cucurbita maxima]	[more]

BLAST of PI0027407 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G44840.1	2.2e-20	61.64	ethylene-responsive element binding factor 13	[more]
AT2G33710.1	1.8e-14	45.45	Integrase-type DNA-binding superfamily protein	[more]
AT2G33710.2	1.8e-14	45.45	Integrase-type DNA-binding superfamily protein	[more]
AT3G23220.1	6.8e-14	57.38	Integrase-type DNA-binding superfamily protein	[more]
AT5G13330.1	2.0e-13	47.95	related to AP2 6l	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001471	AP2/ERF domain	SMART	SM00380	rav1_2	coord: 90..142 e-value: 5.0E-22 score: 89.2
IPR001471	AP2/ERF domain	PFAM	PF00847	AP2	coord: 91..128 e-value: 1.2E-6 score: 28.6
IPR001471	AP2/ERF domain	PROSITE	PS51032	AP2_ERF	coord: 90..136 score: 15.316457
IPR001471	AP2/ERF domain	CDD	cd00018	AP2	coord: 90..137 e-value: 3.13196E-21 score: 79.2379
IPR036955	AP2/ERF domain superfamily	GENE3D	3.30.730.10	AP2/ERF domain	coord: 89..138 e-value: 4.5E-14 score: 54.3
None	No IPR available	PANTHER	PTHR31190:SF236	ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 13-LIKE	coord: 50..138
IPR044808	Ethylene-responsive transcription factor	PANTHER	PTHR31190	DNA-BINDING DOMAIN	coord: 50..138
IPR016177	DNA-binding domain superfamily	SUPERFAMILY	54171	DNA-binding domain	coord: 91..137

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0027407.1	PI0027407.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009873	ethylene-activated signaling pathway
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity