PI0027406 (gene) Melon (PI 482460) v1

Overview


Name	PI0027406
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Protein MNN4-like
Location	chr01: 13060987 .. 13061717 (-)
RNA-Seq Expression	PI0027406
Synteny	PI0027406

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAACAAGGGTCATGGCAAAAAGGAAAAAAGAGGTCGTTTGGACCATCCAAGATAAAGAAGAAAACGGGAGCATCCAGACCTGAAGATCCCCAACTAGGCGGCGGTGAGACGAAAAAGAAAAAGTCCAACATCAACACGATCATAAAAATAGAGAAGAGACTCTTTCCTTTCAACGGACCCCACCAGATTTCATCTACGTGCCAATCCAAACGTTTGGATGGAAGAAATTTTTCAAGGAGCACACAAAGGTGAGTTTGGAAGTTGTCAAGAAATTCTAGACGCAAGGTTCAATGCTAAAGAATGTTATGTCCAAATGGAAGACAAAAAGGTGAGCTTCAACATTGAGGCCATAACAACCTCTACGACCTGCCCAATAATGAAGATACATCAAGACAGTTAGTGGTCAATCCAACGCGGAAGCACGCTCGGGAAGCGTTAGAAGTAATCGTTTGGCCTGGGGCCAAATGGGAGAAACGCCAACGGGAAATTATCAACTGTATCCATACCAACACACTACTAAGGGAAGCGTGTGGCTGTTCTACATAAAAAAGAAGATATTTCCAACGCACCATGACAGCACGATATACTTGGAGTATGCAATGCTCATCTATTGCATCTTTACGCGATTGAAAGCGATTGAAGGTCAACCTGGACGCCATGATCAGCAACGACATCCTCTCTTGGATGGAATCTCCCAAGAACGTCATGCTCTACCCTTCAACCGTTGA

mRNA sequence

ATGGAACAAGGGTCATGGCAAAAAGGAAAAAAGAGGTCGTTTGGACCATCCAAGATAAAGAAGAAAACGGGAGCATCCAGACCTGAAGATCCCCAACTAGGCGGCGGTGAGACGAAAAAGAAAAAGTCCAACATCAACACGATCATAAAAATAGAGAAGAGACTCTTTCCTTTCAACGGACCCCACCAGATTTCATCTACGTGCCAATCCAAACGTTTGGATGGAAGAAATTTTTCAAGGAGCACACAAAGATACATCAAGACAGTTAGTGGTCAATCCAACGCGGAAGCACGCTCGGGAAGCGTTAGAAGTAATCGTTTGGCCTGGGGCCAAATGGGAGAAACGCCAACGGGAAATTATCAACTGTATCCATACCAACACACTACTAAGGGAAGCGTGTGGCTGTTCTACATAAAAAAGAAGATATTTCCAACGCACCATGACAGCACGATATACTTGGAGTATGCAATGCTCATCTATTGCATCTTTACGCGATTGAAAGCGATTGAAGGTCAACCTGGACGCCATGATCAGCAACGACATCCTCTCTTGGATGGAATCTCCCAAGAACGTCATGCTCTACCCTTCAACCGTTGA

Coding sequence (CDS)

ATGGAACAAGGGTCATGGCAAAAAGGAAAAAAGAGGTCGTTTGGACCATCCAAGATAAAGAAGAAAACGGGAGCATCCAGACCTGAAGATCCCCAACTAGGCGGCGGTGAGACGAAAAAGAAAAAGTCCAACATCAACACGATCATAAAAATAGAGAAGAGACTCTTTCCTTTCAACGGACCCCACCAGATTTCATCTACGTGCCAATCCAAACGTTTGGATGGAAGAAATTTTTCAAGGAGCACACAAAGATACATCAAGACAGTTAGTGGTCAATCCAACGCGGAAGCACGCTCGGGAAGCGTTAGAAGTAATCGTTTGGCCTGGGGCCAAATGGGAGAAACGCCAACGGGAAATTATCAACTGTATCCATACCAACACACTACTAAGGGAAGCGTGTGGCTGTTCTACATAAAAAAGAAGATATTTCCAACGCACCATGACAGCACGATATACTTGGAGTATGCAATGCTCATCTATTGCATCTTTACGCGATTGAAAGCGATTGAAGGTCAACCTGGACGCCATGATCAGCAACGACATCCTCTCTTGGATGGAATCTCCCAAGAACGTCATGCTCTACCCTTCAACCGTTGA

Protein sequence

MEQGSWQKGKKRSFGPSKIKKKTGASRPEDPQLGGGETKKKKSNINTIIKIEKRLFPFNGPHQISSTCQSKRLDGRNFSRSTQRYIKTVSGQSNAEARSGSVRSNRLAWGQMGETPTGNYQLYPYQHTTKGSVWLFYIKKKIFPTHHDSTIYLEYAMLIYCIFTRLKAIEGQPGRHDQQRHPLLDGISQERHALPFNR

Homology

[Close]

BLAST of PI0027406 vs. ExPASy TrEMBL
Match: A0A5D3CVL7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold94G00870 PE=4 SV=1)

HSP 1 Score: 75.9 bits (185), Expect = 2.2e-10
Identity = 32/48 (66.67%), Postives = 40/48 (83.33%), Query Frame = 0


Query: 115 TPTGNYQLYPYQHTTKGSVWLFYIKKKIFPTHHDSTIYLEYAMLIYCI 163
           TPT   QL+P+Q T + +VWLF+IKKKIFPTHHDSTI  EYA+++YCI
Sbjct: 122 TPTRRLQLFPHQLTIEANVWLFFIKKKIFPTHHDSTILTEYALVLYCI 169

[Close]

BLAST of PI0027406 vs. ExPASy TrEMBL
Match: A0A5A7U806 (Transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold163G00620 PE=4 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 2.4e-09
Identity = 52/152 (34.21%), Postives = 73/152 (48.03%), Query Frame = 0


Query: 16   PSKIKKKTGASRPEDPQLGGGETKKKKSNINTIIKIEKRLFPFNGPHQISSTCQSKRLDG 75
            P K K K G SRP+D Q  G E    +  +   I   +  +      ++  T +      
Sbjct: 1185 PKKSKNKAGTSRPQDVQ-KGSEVGHHEHVLCGKIPFGRESYAIVEDEKVPFTTEE----- 1244

Query: 76   RNFSRSTQRYIKTVSGQS-NAEARSGSVRS--NRLAWGQMG--ETPTGNYQLYPYQHTTK 135
             N        +    GQ    + R G  +     + W +     TPT   QL+P+Q T +
Sbjct: 1245 INELYDLPNDLGAYPGQRLIVDCREGDAKKIIKLIVWPEADCTSTPTRRLQLFPHQLTIE 1304

Query: 136  GSVWLFYIKKKIFPTHHDSTIYLEYAMLIYCI 163
             +VWLF+IKKKIFPTHHDSTI  EYA+++YCI
Sbjct: 1305 ANVWLFFIKKKIFPTHHDSTILTEYALVLYCI 1330

[Close]

BLAST of PI0027406 vs. ExPASy TrEMBL
Match: A0A5D3DEJ8 (Plant transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold543G00110 PE=4 SV=1)

HSP 1 Score: 70.5 bits (171), Expect = 9.1e-09
Identity = 29/52 (55.77%), Postives = 38/52 (73.08%), Query Frame = 0


Query: 115 TPTGNYQLYPYQHTTKGSVWLFYIKKKIFPTHHDSTIYLEYAMLIYCIFTRL 167
           TPTG YQL+PY    K S+WL ++KKK+ PTHHD+TI +E  ML+Y I  +L
Sbjct: 459 TPTGKYQLFPYNLNVKASIWLVFVKKKLTPTHHDTTISMERIMLVYYIMDKL 510

[Close]

BLAST of PI0027406 vs. ExPASy TrEMBL
Match: A0A5A7V6J8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold27160G00010 PE=4 SV=1)

HSP 1 Score: 70.5 bits (171), Expect = 9.1e-09
Identity = 29/52 (55.77%), Postives = 38/52 (73.08%), Query Frame = 0


Query: 115 TPTGNYQLYPYQHTTKGSVWLFYIKKKIFPTHHDSTIYLEYAMLIYCIFTRL 167
           TPTG YQL+PY    K S+WL ++KKK+ PTHHD+TI +E  ML+Y I  +L
Sbjct: 7   TPTGKYQLFPYNLNAKASIWLVFVKKKLTPTHHDTTISMERIMLVYYIMEKL 58

[Close]

BLAST of PI0027406 vs. ExPASy TrEMBL
Match: A0A5D3DW38 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1213G00020 PE=4 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 7.7e-08
Identity = 29/51 (56.86%), Postives = 38/51 (74.51%), Query Frame = 0


Query: 115 TPTGNYQLYPYQHTTKGSVWLFYIKKKIFPTHHDSTIYLEYAMLIYCIFTR 166
           TP  + QL+ +Q TT  + WLF+IKKKI PTHHD+TI +EYA+L YCI  +
Sbjct: 44  TPAKSLQLFRHQLTTDSNEWLFFIKKKILPTHHDNTIPIEYALLSYCIMAK 94

[Close]

BLAST of PI0027406 vs. NCBI nr
Match: TYK15967.1 (hypothetical protein E5676_scaffold94G00870 [Cucumis melo var. makuwa])

HSP 1 Score: 75.9 bits (185), Expect = 4.5e-10
Identity = 32/48 (66.67%), Postives = 40/48 (83.33%), Query Frame = 0


Query: 115 TPTGNYQLYPYQHTTKGSVWLFYIKKKIFPTHHDSTIYLEYAMLIYCI 163
           TPT   QL+P+Q T + +VWLF+IKKKIFPTHHDSTI  EYA+++YCI
Sbjct: 122 TPTRRLQLFPHQLTIEANVWLFFIKKKIFPTHHDSTILTEYALVLYCI 169

[Close]

BLAST of PI0027406 vs. NCBI nr
Match: KAA0049609.1 (transposase [Cucumis melo var. makuwa])

HSP 1 Score: 72.4 bits (176), Expect = 4.9e-09
Identity = 52/152 (34.21%), Postives = 73/152 (48.03%), Query Frame = 0


Query: 16   PSKIKKKTGASRPEDPQLGGGETKKKKSNINTIIKIEKRLFPFNGPHQISSTCQSKRLDG 75
            P K K K G SRP+D Q  G E    +  +   I   +  +      ++  T +      
Sbjct: 1185 PKKSKNKAGTSRPQDVQ-KGSEVGHHEHVLCGKIPFGRESYAIVEDEKVPFTTEE----- 1244

Query: 76   RNFSRSTQRYIKTVSGQS-NAEARSGSVRS--NRLAWGQMG--ETPTGNYQLYPYQHTTK 135
             N        +    GQ    + R G  +     + W +     TPT   QL+P+Q T +
Sbjct: 1245 INELYDLPNDLGAYPGQRLIVDCREGDAKKIIKLIVWPEADCTSTPTRRLQLFPHQLTIE 1304

Query: 136  GSVWLFYIKKKIFPTHHDSTIYLEYAMLIYCI 163
             +VWLF+IKKKIFPTHHDSTI  EYA+++YCI
Sbjct: 1305 ANVWLFFIKKKIFPTHHDSTILTEYALVLYCI 1330

[Close]

BLAST of PI0027406 vs. NCBI nr
Match: TYK21965.1 (Plant transposase [Cucumis melo var. makuwa])

HSP 1 Score: 70.5 bits (171), Expect = 1.9e-08
Identity = 29/52 (55.77%), Postives = 38/52 (73.08%), Query Frame = 0


Query: 115 TPTGNYQLYPYQHTTKGSVWLFYIKKKIFPTHHDSTIYLEYAMLIYCIFTRL 167
           TPTG YQL+PY    K S+WL ++KKK+ PTHHD+TI +E  ML+Y I  +L
Sbjct: 459 TPTGKYQLFPYNLNVKASIWLVFVKKKLTPTHHDTTISMERIMLVYYIMDKL 510

[Close]

BLAST of PI0027406 vs. NCBI nr
Match: KAA0062870.1 (hypothetical protein E6C27_scaffold27160G00010 [Cucumis melo var. makuwa])

HSP 1 Score: 70.5 bits (171), Expect = 1.9e-08
Identity = 29/52 (55.77%), Postives = 38/52 (73.08%), Query Frame = 0


Query: 115 TPTGNYQLYPYQHTTKGSVWLFYIKKKIFPTHHDSTIYLEYAMLIYCIFTRL 167
           TPTG YQL+PY    K S+WL ++KKK+ PTHHD+TI +E  ML+Y I  +L
Sbjct: 7   TPTGKYQLFPYNLNAKASIWLVFVKKKLTPTHHDTTISMERIMLVYYIMEKL 58

[Close]

BLAST of PI0027406 vs. NCBI nr
Match: KAE8650696.1 (hypothetical protein Csa_023718, partial [Cucumis sativus])

HSP 1 Score: 67.4 bits (163), Expect = 1.6e-07
Identity = 30/56 (53.57%), Postives = 40/56 (71.43%), Query Frame = 0


Query: 116 PTGNYQLYPYQHTTKGSVWLFYIKKKIFPTHHDSTIYLEYAMLIYCIFTRLKAIEG 172
           P G +QLYP+Q T + +VWLF+IKKKI PT +DSTI ++YAM  Y I T+ +   G
Sbjct: 16  PMGRFQLYPHQLTIEANVWLFFIKKKIVPTRYDSTISVDYAMNFYYIMTKKRQSTG 71

The following BLAST results are available for this feature:

BLAST of PI0027406 vs.


Match Name	E-value	Identity	Description

BLAST of PI0027406 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CVL7	2.2e-10	66.67	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7U806	2.4e-09	34.21	Transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold163G00620 PE...	[more]
A0A5D3DEJ8	9.1e-09	55.77	Plant transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold543G00...	[more]
A0A5A7V6J8	9.1e-09	55.77	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5D3DW38	7.7e-08	56.86	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]

BLAST of PI0027406 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK15967.1	4.5e-10	66.67	hypothetical protein E5676_scaffold94G00870 [Cucumis melo var. makuwa]	[more]
KAA0049609.1	4.9e-09	34.21	transposase [Cucumis melo var. makuwa]	[more]
TYK21965.1	1.9e-08	55.77	Plant transposase [Cucumis melo var. makuwa]	[more]
KAA0062870.1	1.9e-08	55.77	hypothetical protein E6C27_scaffold27160G00010 [Cucumis melo var. makuwa]	[more]
KAE8650696.1	1.6e-07	53.57	hypothetical protein Csa_023718, partial [Cucumis sativus]	[more]

BLAST of PI0027406 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..44
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 22..44

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0027406.1	PI0027406.1	mRNA