PI0027368 (gene) Melon (PI 482460) v1

Overview


Name	PI0027368
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	dnaJ homolog subfamily C member 16
Location	chr10: 12030960 .. 12033399 (-)
RNA-Seq Expression	PI0027368
Synteny	PI0027368

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTCGTGAAATATGCAACCATAAAGGCTTTGATGTTCTCAAAAGGGTGGCTCGAAGAGGATGGAGTTCAAAGTTATGTAACTCTCAATTTCTTATGTTTTTTATTTTAGAAATGTTAAATAAATAGACAAAAATAAATATTGATGAATCTGAAGACATTTCCTTCCTTTTGCGTTCTTACATTGGAGAACTAATATACTAGCATTAATGATTCAGTACTTTGAGTAGATTGAAGTAAAGTTTTTTTTATCTTTTCATATATGTTCATTCTCAGTTGCTTTGCTAGATGGAGTTGCTAATACTGCAGTAGTGGAGCTTGGTGAAGCTCAACTTGCTGCTTACCTTGTAGAGAAAAAGCCTATTGGACAACCATTCTTCAAGAATGGTGAGTTAAATTTAGTCTCCAAGTCCTAGATTTTTTAAAGATATGGAACAGAGTAAACTTGATTAACCTCTCCCACTATTTTTTGTGAGCTCATAAAGATGTAAAGATTGAAATTTTCTTGAGAACACCTATGTTCTATGTAGCATCTTTTATTAAATCTAAATGGCCCTTACAATATTCAATAGTTTTTGTGGCTTTCTTCACTTATTCTTTTTTGTTATGTTGTCTTTCTTATGATGCTTGTAGTTGTATATATGTCAAAAACTAAATAAACAACAGAGTTAGTAAACTTCTTTGTTGCTTCTAAAATCATGTTGTTAGAAAATGTTTTCTGGAATTCATTAGAAGCTTAGAAAATGTTGAAGATCTATTATATAAGCTACAAAAGATTATAAAATCAAATTGATCTATTTGAGTGAAATAGTTGTTTGTTTCTTTCTATTTAGTGCTACTAATTTCTTTTAAACATATGTTAGTTCTGAATATATAGTTACTAATGCTTTGTTTCAAACATATGCCTTTTGTTTTGGGAATACTTCTCTATTGTTCTTGATTTAGTTGAGTTTTCAAGTCTTGAGAAATGAATTATGTGCTCTATTAGCTTATATAATGAGATGAAGTCAGCTTTAAGTTTGAGAAACTTTGTTCAAGCAAAAAATTCTATAGGAATTCTTTTTTATCCTTGCTCCATTGAAATTTTACTCATATTTGTGCCTAGCATTTCAATTTTGAGTTCTCTCGTGAAAATGTATGACTTATGACTTATGATTAATTGGTGCCTTAACTAGAGACTTACTGAAGCATTTATTAAATATAACTTACACTACTACAGAAATTGGATTACTTGACATGGATTCAATATCAAGTAACCATATACTTGACGTTTTACAAAAGCGTCAAGTAATCAACTGTCAAGTATACTCCGATTACTTGACACCAAAACAACGTCAAGTTATATATTTCGTGATATAATTTCCATGTCAAGTAAGATATTATACTTGACTCTTTTCGCATGTCAAGTAAGATAGTATACTTGACTGTTTTTACATGTAAAGTAAGATAGTATACTTGACTCTTTTTACATGTCAAGTGTAAGAATGGATATTTGACACGAAAGAATGAACAAGTTATTTAACTCTTGACATGTATTTAATGTCATGTATACCTTTTATTAACATATTAAATATATTGAATTCTCCATTTCCTCTTTCTCATTTCCTGCATTATATACGTACATTCATTTCAATAAGACATATTCATCAACAAAATAAACTGTCCAACCAGTAGTAATTCCATTATTCACTTGTTAGCGTGTTGGTATGGAATTGAAAGTTCATTTTTTAATAGAAAAAATATGGTTTTTTTCTTAGACTAGGTGCGGTAGATGTCTTTGAATTATTACCATTACAAAGAGGCTTTCAACCCCATGGGAAAAAAACTATGTAATGTTTCTTTCAAGTTATGAGCATTGATCCAACATATTCTATTATGTGCAAGAGGGTGACATAGGTACTTTATCCATCACAACTCAATGCATGTGGTTCATGTTTAAATCTTGCATGCATATAATTTATTTTGGCTTTAACTCTTACTTGTAAGCATTGATCCAACATATTCTATTATAGAGGGAGGTGATCTTGAATGCATGTGGTTTACGTGTAAATCTTTGATGTTAAGGTTCTTTTTATTTCTTTTTTATTATTGTGTACCTAGTTTATATGATGTTTTTATGCTTTAGTGGCTTTAAGAATGCAACTATTTGATAAAATGTTGCTATGTGAACTGATAACTTGTAGAAATACAAGTTATTGTAGCATTTTAGGTAGAATAATGAAGCCGTAATGCATCAAATAGAAAGAAAATGTATAAAATGATAGATGTAGAGGATCAATTGTATCGCAGAGTGTAAAAGAGCTTTATTCCTGTTTTATGCGTTTTTCATGTCTTTATGCAGGTTTTTAGGCGAAAAGAGAAGTAGCCACGTGAGGAAAAAGTTAGGCGAGGAACCACGCGAACAACTAGGCGATCCACAACGTAAAGCTAGGCGACTCTGA

mRNA sequence

ATGCTCGTGAAATATGCAACCATAAAGGCTTTGATGTTCTCAAAAGGGTGGCTCGAAGAGGATGGAGTTCAAATTGCTTTGCTAGATGGAGTTGCTAATACTGCAGTAGTGGAGCTTGGTGAAGCTCAACTTGCTGCTTACCTTGTAGAGAAAAAGCCTATTGGACAACCATTCTTCAAGAATGGCGAAAAGAGAAGTAGCCACGTGAGGAAAAAGTTAGGCGAGGAACCACGCGAACAACTAGGCGATCCACAACGTAAAGCTAGGCGACTCTGA

Coding sequence (CDS)

ATGCTCGTGAAATATGCAACCATAAAGGCTTTGATGTTCTCAAAAGGGTGGCTCGAAGAGGATGGAGTTCAAATTGCTTTGCTAGATGGAGTTGCTAATACTGCAGTAGTGGAGCTTGGTGAAGCTCAACTTGCTGCTTACCTTGTAGAGAAAAAGCCTATTGGACAACCATTCTTCAAGAATGGCGAAAAGAGAAGTAGCCACGTGAGGAAAAAGTTAGGCGAGGAACCACGCGAACAACTAGGCGATCCACAACGTAAAGCTAGGCGACTCTGA

Protein sequence

MLVKYATIKALMFSKGWLEEDGVQIALLDGVANTAVVELGEAQLAAYLVEKKPIGQPFFKNGEKRSSHVRKKLGEEPREQLGDPQRKARRL

Homology

[Close]

BLAST of PI0027368 vs. ExPASy TrEMBL
Match: A0A5A7UUX0 (DnaJ-like protein subfamily C member 16 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G002590 PE=4 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 3.8e-10
Identity = 38/62 (61.29%), Postives = 44/62 (70.97%), Query Frame = 0


Query: 1   MLVKYATIKALMFSKGWLEEDGVQIALLDGVANTAVVELGEAQLAAYLVEKKPIGQPFFK 60
           ML  + +   + FS  W +     +ALLDGVANTAVVELGEAQ AAYL EKKP GQPFF+
Sbjct: 161 MLYSFGSKLCVQFSDAWKQ----IVALLDGVANTAVVELGEAQFAAYLAEKKPTGQPFFR 218

Query: 61  NG 63
           NG
Sbjct: 221 NG 218

[Close]

BLAST of PI0027368 vs. ExPASy TrEMBL
Match: A0A0A0LP59 (J domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G009890 PE=4 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 3.8e-10
Identity = 39/62 (62.90%), Postives = 45/62 (72.58%), Query Frame = 0


Query: 1   MLVKYATIKALMFSKGWLEEDGVQIALLDGVANTAVVELGEAQLAAYLVEKKPIGQPFFK 60
           ML  + +   + FS  W +     +ALLDGVANTAVVELGEAQLAAYL EKKP GQPFF+
Sbjct: 171 MLYSFGSKLCVRFSDVWKQ----IVALLDGVANTAVVELGEAQLAAYLAEKKPTGQPFFR 228

Query: 61  NG 63
           NG
Sbjct: 231 NG 228

[Close]

BLAST of PI0027368 vs. ExPASy TrEMBL
Match: A0A1S3BWH5 (dnaJ homolog subfamily C member 16 OS=Cucumis melo OX=3656 GN=LOC103494006 PE=4 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 3.8e-10
Identity = 38/62 (61.29%), Postives = 44/62 (70.97%), Query Frame = 0


Query: 1   MLVKYATIKALMFSKGWLEEDGVQIALLDGVANTAVVELGEAQLAAYLVEKKPIGQPFFK 60
           ML  + +   + FS  W +     +ALLDGVANTAVVELGEAQ AAYL EKKP GQPFF+
Sbjct: 171 MLYSFGSKLCVQFSDAWKQ----IVALLDGVANTAVVELGEAQFAAYLAEKKPTGQPFFR 228

Query: 61  NG 63
           NG
Sbjct: 231 NG 228

[Close]

BLAST of PI0027368 vs. ExPASy TrEMBL
Match: A0A6J1IB74 (dnaJ homolog subfamily C member 16 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111470896 PE=4 SV=1)

HSP 1 Score: 69.7 bits (169), Expect = 7.1e-09
Identity = 37/62 (59.68%), Postives = 41/62 (66.13%), Query Frame = 0


Query: 1   MLVKYATIKALMFSKGWLEEDGVQIALLDGVANTAVVELGEAQLAAYLVEKKPIGQPFFK 60
           ML  + +     FS  W       + LLDGVANTAVVELGEAQLAAY  EKKP GQPFF+
Sbjct: 156 MLYSFGSKLCAQFSDVWKR----IVTLLDGVANTAVVELGEAQLAAYFAEKKPTGQPFFR 213

Query: 61  NG 63
           NG
Sbjct: 216 NG 213

[Close]

BLAST of PI0027368 vs. ExPASy TrEMBL
Match: A0A6J1I4I4 (dnaJ homolog subfamily C member 16 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111470896 PE=4 SV=1)

HSP 1 Score: 69.7 bits (169), Expect = 7.1e-09
Identity = 37/62 (59.68%), Postives = 41/62 (66.13%), Query Frame = 0


Query: 1   MLVKYATIKALMFSKGWLEEDGVQIALLDGVANTAVVELGEAQLAAYLVEKKPIGQPFFK 60
           ML  + +     FS  W       + LLDGVANTAVVELGEAQLAAY  EKKP GQPFF+
Sbjct: 156 MLYSFGSKLCAQFSDVWKR----IVTLLDGVANTAVVELGEAQLAAYFAEKKPTGQPFFR 213

Query: 61  NG 63
           NG
Sbjct: 216 NG 213

[Close]

BLAST of PI0027368 vs. NCBI nr
Match: XP_038878990.1 (uncharacterized protein LOC120071055 [Benincasa hispida])

HSP 1 Score: 74.3 bits (181), Expect = 6.0e-10
Identity = 39/62 (62.90%), Postives = 45/62 (72.58%), Query Frame = 0


Query: 1   MLVKYATIKALMFSKGWLEEDGVQIALLDGVANTAVVELGEAQLAAYLVEKKPIGQPFFK 60
           ML  + +   + FS  W +     +ALLDGVANTAVVELGEAQLAAYL EKKP GQPFF+
Sbjct: 171 MLYSFGSKLCVQFSDVWKQ----IVALLDGVANTAVVELGEAQLAAYLAEKKPTGQPFFR 228

Query: 61  NG 63
           NG
Sbjct: 231 NG 228

[Close]

BLAST of PI0027368 vs. NCBI nr
Match: XP_004138176.1 (uncharacterized protein LOC101203381 [Cucumis sativus] >KGN63685.1 hypothetical protein Csa_013795 [Cucumis sativus])

HSP 1 Score: 73.9 bits (180), Expect = 7.8e-10
Identity = 39/62 (62.90%), Postives = 45/62 (72.58%), Query Frame = 0


Query: 1   MLVKYATIKALMFSKGWLEEDGVQIALLDGVANTAVVELGEAQLAAYLVEKKPIGQPFFK 60
           ML  + +   + FS  W +     +ALLDGVANTAVVELGEAQLAAYL EKKP GQPFF+
Sbjct: 171 MLYSFGSKLCVRFSDVWKQ----IVALLDGVANTAVVELGEAQLAAYLAEKKPTGQPFFR 228

Query: 61  NG 63
           NG
Sbjct: 231 NG 228

[Close]

BLAST of PI0027368 vs. NCBI nr
Match: KAA0057956.1 (dnaJ-like protein subfamily C member 16 [Cucumis melo var. makuwa])

HSP 1 Score: 73.9 bits (180), Expect = 7.8e-10
Identity = 38/62 (61.29%), Postives = 44/62 (70.97%), Query Frame = 0


Query: 1   MLVKYATIKALMFSKGWLEEDGVQIALLDGVANTAVVELGEAQLAAYLVEKKPIGQPFFK 60
           ML  + +   + FS  W +     +ALLDGVANTAVVELGEAQ AAYL EKKP GQPFF+
Sbjct: 161 MLYSFGSKLCVQFSDAWKQ----IVALLDGVANTAVVELGEAQFAAYLAEKKPTGQPFFR 218

Query: 61  NG 63
           NG
Sbjct: 221 NG 218

[Close]

BLAST of PI0027368 vs. NCBI nr
Match: XP_008453219.1 (PREDICTED: dnaJ homolog subfamily C member 16 [Cucumis melo])

HSP 1 Score: 73.9 bits (180), Expect = 7.8e-10
Identity = 38/62 (61.29%), Postives = 44/62 (70.97%), Query Frame = 0


Query: 1   MLVKYATIKALMFSKGWLEEDGVQIALLDGVANTAVVELGEAQLAAYLVEKKPIGQPFFK 60
           ML  + +   + FS  W +     +ALLDGVANTAVVELGEAQ AAYL EKKP GQPFF+
Sbjct: 171 MLYSFGSKLCVQFSDAWKQ----IVALLDGVANTAVVELGEAQFAAYLAEKKPTGQPFFR 228

Query: 61  NG 63
           NG
Sbjct: 231 NG 228

[Close]

BLAST of PI0027368 vs. NCBI nr
Match: XP_022972327.1 (dnaJ homolog subfamily C member 16 isoform X1 [Cucurbita maxima])

HSP 1 Score: 69.7 bits (169), Expect = 1.5e-08
Identity = 37/62 (59.68%), Postives = 41/62 (66.13%), Query Frame = 0


Query: 1   MLVKYATIKALMFSKGWLEEDGVQIALLDGVANTAVVELGEAQLAAYLVEKKPIGQPFFK 60
           ML  + +     FS  W       + LLDGVANTAVVELGEAQLAAY  EKKP GQPFF+
Sbjct: 156 MLYSFGSKLCAQFSDVWKR----IVTLLDGVANTAVVELGEAQLAAYFAEKKPTGQPFFR 213

Query: 61  NG 63
           NG
Sbjct: 216 NG 213

[Close]

BLAST of PI0027368 vs. TAIR 10
Match: AT1G18700.1 (DNAJ heat shock N-terminal domain-containing protein )

HSP 1 Score: 55.1 bits (131), Expect = 3.5e-08
Identity = 25/38 (65.79%), Postives = 30/38 (78.95%), Query Frame = 0


Query: 25  IALLDGVANTAVVELGEAQLAAYLVEKKPIGQPFFKNG 63
           +ALLDGVAN A++ELG+ QL  YL EKKP GQ FF+ G
Sbjct: 186 VALLDGVANHAMLELGDVQLVTYLAEKKPTGQVFFRKG 223

[Close]

BLAST of PI0027368 vs. TAIR 10
Match: AT1G18700.2 (DNAJ heat shock N-terminal domain-containing protein )

HSP 1 Score: 55.1 bits (131), Expect = 3.5e-08
Identity = 25/38 (65.79%), Postives = 30/38 (78.95%), Query Frame = 0


Query: 25  IALLDGVANTAVVELGEAQLAAYLVEKKPIGQPFFKNG 63
           +ALLDGVAN A++ELG+ QL  YL EKKP GQ FF+ G
Sbjct: 186 VALLDGVANHAMLELGDVQLVTYLAEKKPTGQVFFRKG 223

[Close]

BLAST of PI0027368 vs. TAIR 10
Match: AT1G18700.4 (DNAJ heat shock N-terminal domain-containing protein )

HSP 1 Score: 55.1 bits (131), Expect = 3.5e-08
Identity = 25/38 (65.79%), Postives = 30/38 (78.95%), Query Frame = 0


Query: 25  IALLDGVANTAVVELGEAQLAAYLVEKKPIGQPFFKNG 63
           +ALLDGVAN A++ELG+ QL  YL EKKP GQ FF+ G
Sbjct: 201 VALLDGVANHAMLELGDVQLVTYLAEKKPTGQVFFRKG 238

[Close]

BLAST of PI0027368 vs. TAIR 10
Match: AT1G18700.3 (DNAJ heat shock N-terminal domain-containing protein )

HSP 1 Score: 52.8 bits (125), Expect = 1.7e-07
Identity = 24/36 (66.67%), Postives = 29/36 (80.56%), Query Frame = 0


Query: 25  IALLDGVANTAVVELGEAQLAAYLVEKKPIGQPFFK 61
           +ALLDGVAN A++ELG+ QL  YL EKKP GQ FF+
Sbjct: 186 VALLDGVANHAMLELGDVQLVTYLAEKKPTGQVFFR 221

The following BLAST results are available for this feature:

BLAST of PI0027368 vs.


Match Name	E-value	Identity	Description

BLAST of PI0027368 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UUX0	3.8e-10	61.29	DnaJ-like protein subfamily C member 16 OS=Cucumis melo var. makuwa OX=1194695 G...	[more]
A0A0A0LP59	3.8e-10	62.90	J domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G009890 PE=4 SV=1	[more]
A0A1S3BWH5	3.8e-10	61.29	dnaJ homolog subfamily C member 16 OS=Cucumis melo OX=3656 GN=LOC103494006 PE=4 ...	[more]
A0A6J1IB74	7.1e-09	59.68	dnaJ homolog subfamily C member 16 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC...	[more]
A0A6J1I4I4	7.1e-09	59.68	dnaJ homolog subfamily C member 16 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC...	[more]

BLAST of PI0027368 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038878990.1	6.0e-10	62.90	uncharacterized protein LOC120071055 [Benincasa hispida]	[more]
XP_004138176.1	7.8e-10	62.90	uncharacterized protein LOC101203381 [Cucumis sativus] >KGN63685.1 hypothetical ...	[more]
KAA0057956.1	7.8e-10	61.29	dnaJ-like protein subfamily C member 16 [Cucumis melo var. makuwa]	[more]
XP_008453219.1	7.8e-10	61.29	PREDICTED: dnaJ homolog subfamily C member 16 [Cucumis melo]	[more]
XP_022972327.1	1.5e-08	59.68	dnaJ homolog subfamily C member 16 isoform X1 [Cucurbita maxima]	[more]

BLAST of PI0027368 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G18700.1	3.5e-08	65.79	DNAJ heat shock N-terminal domain-containing protein	[more]
AT1G18700.2	3.5e-08	65.79	DNAJ heat shock N-terminal domain-containing protein	[more]
AT1G18700.4	3.5e-08	65.79	DNAJ heat shock N-terminal domain-containing protein	[more]
AT1G18700.3	1.7e-07	66.67	DNAJ heat shock N-terminal domain-containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 68..91
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 56..91

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0027368.1	PI0027368.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane