PI0027355 (gene) Melon (PI 482460) v1

Overview


Name	PI0027355
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Stress response protein NST1-like
Location	chr11: 19503450 .. 19503614 (+)
RNA-Seq Expression	PI0027355
Synteny	PI0027355

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAACGAGTGGATGAGGCACAAAGAAGCCATATACCATGGCTTGATAGATCTTGAGCCAGATATAGGTATAATGAAGCTTGATGATGATAGCCAGCCTAGGTATAAACGCGTAAGGCACAACGCGAGAAAGGTCTTTTGGCAGCCGGAGGATCAAGTCAACTAG

mRNA sequence

ATGAACGAGTGGATGAGGCACAAAGAAGCCATATACCATGGCTTGATAGATCTTGAGCCAGATATAGGTATAATGAAGCTTGATGATGATAGCCAGCCTAGGTATAAACGCGTAAGGCACAACGCGAGAAAGGTCTTTTGGCAGCCGGAGGATCAAGTCAACTAG

Coding sequence (CDS)

ATGAACGAGTGGATGAGGCACAAAGAAGCCATATACCATGGCTTGATAGATCTTGAGCCAGATATAGGTATAATGAAGCTTGATGATGATAGCCAGCCTAGGTATAAACGCGTAAGGCACAACGCGAGAAAGGTCTTTTGGCAGCCGGAGGATCAAGTCAACTAG

Protein sequence

MNEWMRHKEAIYHGLIDLEPDIGIMKLDDDSQPRYKRVRHNARKVFWQPEDQVN

Homology

[Close]

BLAST of PI0027355 vs. ExPASy TrEMBL
Match: A0A5D3BXZ2 (Stress response protein NST1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold675G00240 PE=4 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 1.1e-06
Identity = 27/43 (62.79%), Postives = 34/43 (79.07%), Query Frame = 0


Query: 2  NEWMRHKEAIYHGLIDLEPDIGIMKLDDDSQPRYKRVRHNARK 45
          +EWMR  E+IYHGL DL+  +GIM+LDDD QPRYK ++H A K
Sbjct: 41 DEWMRQDESIYHGLTDLKSRMGIMRLDDD-QPRYKHLKHGAEK 82

[Close]

BLAST of PI0027355 vs. ExPASy TrEMBL
Match: A0A5D3BK22 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2510G00680 PE=4 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 1.1e-04
Identity = 24/41 (58.54%), Postives = 29/41 (70.73%), Query Frame = 0


Query: 2   NEWMRHKEAIYHGLIDLEPDIGIMKLDDDSQPRYKRVRHNA 43
           NEWMRH+EAIY  L  LEP  G+    DD+QP YK V+H+A
Sbjct: 270 NEWMRHEEAIYKDLTHLEPWFGVTDHKDDTQPGYKCVKHDA 310

[Close]

BLAST of PI0027355 vs. ExPASy TrEMBL
Match: A0A5A7V7A4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1337G00110 PE=4 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 1.1e-04
Identity = 24/41 (58.54%), Postives = 29/41 (70.73%), Query Frame = 0


Query: 2   NEWMRHKEAIYHGLIDLEPDIGIMKLDDDSQPRYKRVRHNA 43
           NEWMRH+EAIY  L  LEP  G+    DD+QP YK V+H+A
Sbjct: 266 NEWMRHEEAIYKDLTHLEPWFGVTDHKDDTQPGYKCVKHDA 306

[Close]

BLAST of PI0027355 vs. ExPASy TrEMBL
Match: A0A5A7TBU7 (Stress response protein NST1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold279G00120 PE=4 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 1.8e-04
Identity = 23/44 (52.27%), Postives = 34/44 (77.27%), Query Frame = 0


Query: 2   NEWMRHKEAIYHGLIDLEPDIGIMKLDDDSQPRYKRVRHNARKV 46
           N+WMR +E IY GL+DL+PD+  M+L DD++P+ K ++H A KV
Sbjct: 67  NKWMRREENIYKGLLDLKPDMETMRL-DDNRPKNKHLKHEANKV 109

[Close]

BLAST of PI0027355 vs. ExPASy TrEMBL
Match: A0A5D3DQE7 (Stress response protein NST1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold862G00740 PE=4 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 1.8e-04
Identity = 23/44 (52.27%), Postives = 34/44 (77.27%), Query Frame = 0


Query: 2   NEWMRHKEAIYHGLIDLEPDIGIMKLDDDSQPRYKRVRHNARKV 46
           N+WMR +E IY GL+DL+PD+  M+L DD++P+ K ++H A KV
Sbjct: 67  NKWMRREENIYKGLLDLKPDMETMRL-DDNRPKNKHLKHEANKV 109

[Close]

BLAST of PI0027355 vs. NCBI nr
Match: KAA0052868.1 (stress response protein NST1-like [Cucumis melo var. makuwa] >TYK04357.1 stress response protein NST1-like [Cucumis melo var. makuwa])

HSP 1 Score: 61.6 bits (148), Expect = 2.4e-06
Identity = 27/43 (62.79%), Postives = 34/43 (79.07%), Query Frame = 0


Query: 2  NEWMRHKEAIYHGLIDLEPDIGIMKLDDDSQPRYKRVRHNARK 45
          +EWMR  E+IYHGL DL+  +GIM+LDDD QPRYK ++H A K
Sbjct: 41 DEWMRQDESIYHGLTDLKSRMGIMRLDDD-QPRYKHLKHGAEK 82

[Close]

BLAST of PI0027355 vs. NCBI nr
Match: TYK00171.1 (uncharacterized protein E5676_scaffold2510G00680 [Cucumis melo var. makuwa])

HSP 1 Score: 55.1 bits (131), Expect = 2.2e-04
Identity = 24/41 (58.54%), Postives = 29/41 (70.73%), Query Frame = 0


Query: 2   NEWMRHKEAIYHGLIDLEPDIGIMKLDDDSQPRYKRVRHNA 43
           NEWMRH+EAIY  L  LEP  G+    DD+QP YK V+H+A
Sbjct: 270 NEWMRHEEAIYKDLTHLEPWFGVTDHKDDTQPGYKCVKHDA 310

[Close]

BLAST of PI0027355 vs. NCBI nr
Match: KAA0063104.1 (uncharacterized protein E6C27_scaffold1337G00110 [Cucumis melo var. makuwa])

HSP 1 Score: 55.1 bits (131), Expect = 2.2e-04
Identity = 24/41 (58.54%), Postives = 29/41 (70.73%), Query Frame = 0


Query: 2   NEWMRHKEAIYHGLIDLEPDIGIMKLDDDSQPRYKRVRHNA 43
           NEWMRH+EAIY  L  LEP  G+    DD+QP YK V+H+A
Sbjct: 266 NEWMRHEEAIYKDLTHLEPWFGVTDHKDDTQPGYKCVKHDA 306

[Close]

BLAST of PI0027355 vs. NCBI nr
Match: TYK25768.1 (stress response protein NST1-like [Cucumis melo var. makuwa])

HSP 1 Score: 54.3 bits (129), Expect = 3.8e-04
Identity = 23/44 (52.27%), Postives = 34/44 (77.27%), Query Frame = 0


Query: 2   NEWMRHKEAIYHGLIDLEPDIGIMKLDDDSQPRYKRVRHNARKV 46
           N+WMR +E IY GL+DL+PD+  M+L DD++P+ K ++H A KV
Sbjct: 67  NKWMRREENIYKGLLDLKPDMETMRL-DDNRPKNKHLKHEANKV 109

[Close]

BLAST of PI0027355 vs. NCBI nr
Match: KAA0038829.1 (stress response protein NST1-like [Cucumis melo var. makuwa])

HSP 1 Score: 54.3 bits (129), Expect = 3.8e-04
Identity = 23/44 (52.27%), Postives = 34/44 (77.27%), Query Frame = 0


Query: 2   NEWMRHKEAIYHGLIDLEPDIGIMKLDDDSQPRYKRVRHNARKV 46
           N+WMR +E IY GL+DL+PD+  M+L DD++P+ K ++H A KV
Sbjct: 67  NKWMRREENIYKGLLDLKPDMETMRL-DDNRPKNKHLKHEANKV 109

The following BLAST results are available for this feature:

BLAST of PI0027355 vs.


Match Name	E-value	Identity	Description

BLAST of PI0027355 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BXZ2	1.1e-06	62.79	Stress response protein NST1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A5D3BK22	1.1e-04	58.54	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7V7A4	1.1e-04	58.54	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5A7TBU7	1.8e-04	52.27	Stress response protein NST1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2...	[more]
A0A5D3DQE7	1.8e-04	52.27	Stress response protein NST1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]

BLAST of PI0027355 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0052868.1	2.4e-06	62.79	stress response protein NST1-like [Cucumis melo var. makuwa] >TYK04357.1 stress ...	[more]
TYK00171.1	2.2e-04	58.54	uncharacterized protein E5676_scaffold2510G00680 [Cucumis melo var. makuwa]	[more]
KAA0063104.1	2.2e-04	58.54	uncharacterized protein E6C27_scaffold1337G00110 [Cucumis melo var. makuwa]	[more]
TYK25768.1	3.8e-04	52.27	stress response protein NST1-like [Cucumis melo var. makuwa]	[more]
KAA0038829.1	3.8e-04	52.27	stress response protein NST1-like [Cucumis melo var. makuwa]	[more]

BLAST of PI0027355 vs. NCBI nr


Match Name	E-value	Identity	Description

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0027355.1	PI0027355.1	mRNA