PI0027322 (gene) Melon (PI 482460) v1

Overview
NamePI0027322
Typegene
OrganismCucumis metuliferus (Melon (PI 482460) v1)
DescriptionUnknown protein
Locationchr03: 9221920 .. 9222207 (-)
RNA-Seq ExpressionPI0027322
SyntenyPI0027322
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGGTGTTCAACTCCCAGTATTCTTATTTTGGCTATTGTTGTAGCATCCATAGCTCTTAGGATACCGTCGGAAACCACCGCAAGAGCCATCGCCGACCCTTCTCCTCTGTCACAGCCGCGGTTTCCCATATACAATACGCTAATGAAAGCCAGGCTTAATGACGAAGCAGGGTCAGGAGAGGAAAATGGAGATGATGAATCTGATCCACCATTGAAGGAAGAAAAGGGGAGCAGAAAACCTTGGCCAAAGAACCCTGTCTCTAAATCTCCACCACCACCATTTTAG

mRNA sequence

ATGGGGTGTTCAACTCCCAGTATTCTTATTTTGGCTATTGTTGTAGCATCCATAGCTCTTAGGATACCGTCGGAAACCACCGCAAGAGCCATCGCCGACCCTTCTCCTCTGTCACAGCCGCGGTTTCCCATATACAATACGCTAATGAAAGCCAGGCTTAATGACGAAGCAGGGTCAGGAGAGGAAAATGGAGATGATGAATCTGATCCACCATTGAAGGAAGAAAAGGGGAGCAGAAAACCTTGGCCAAAGAACCCTGTCTCTAAATCTCCACCACCACCATTTTAG

Coding sequence (CDS)

ATGGGGTGTTCAACTCCCAGTATTCTTATTTTGGCTATTGTTGTAGCATCCATAGCTCTTAGGATACCGTCGGAAACCACCGCAAGAGCCATCGCCGACCCTTCTCCTCTGTCACAGCCGCGGTTTCCCATATACAATACGCTAATGAAAGCCAGGCTTAATGACGAAGCAGGGTCAGGAGAGGAAAATGGAGATGATGAATCTGATCCACCATTGAAGGAAGAAAAGGGGAGCAGAAAACCTTGGCCAAAGAACCCTGTCTCTAAATCTCCACCACCACCATTTTAG

Protein sequence

MGCSTPSILILAIVVASIALRIPSETTARAIADPSPLSQPRFPIYNTLMKARLNDEAGSGEENGDDESDPPLKEEKGSRKPWPKNPVSKSPPPPF
Homology
BLAST of PI0027322 vs. ExPASy TrEMBL
Match: A0A5A7UIB8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1163G00190 PE=4 SV=1)

HSP 1 Score: 156.0 bits (393), Expect = 7.9e-35
Identity = 82/95 (86.32%), Postives = 84/95 (88.42%), Query Frame = 0

Query: 1  MGCSTPSILILAIVVASIALRIPSETTARAIADPSPLSQPRFPIYNTLMKARLNDEAGSG 60
          MGCST +ILIL I VASIALR+PSETTARAIADP PLS P  PIYNTLMK RLNDEAGSG
Sbjct: 1  MGCSTANILILTIFVASIALRLPSETTARAIADPYPLSWPWLPIYNTLMKVRLNDEAGSG 60

Query: 61 EENGDDESDPPLKEEKGSRKPWPKNPVSKSPPPPF 96
          EENGDDESDPP KE K SRKPWPKNPVSKSPPPPF
Sbjct: 61 EENGDDESDPPSKEAKSSRKPWPKNPVSKSPPPPF 95

BLAST of PI0027322 vs. ExPASy TrEMBL
Match: A0A0A0K9K2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G058720 PE=4 SV=1)

HSP 1 Score: 154.1 bits (388), Expect = 3.0e-34
Identity = 80/95 (84.21%), Postives = 86/95 (90.53%), Query Frame = 0

Query: 1  MGCSTPSILILAIVVASIALRIPSETTARAIADPSPLSQPRFPIYNTLMKARLNDEAGSG 60
          MGCST +I+IL I VASIALR+P+ETTARAIADP PLS PR  IYNT+MK RLNDEAGSG
Sbjct: 1  MGCSTANIVILTIFVASIALRLPTETTARAIADPYPLSWPRLLIYNTVMKVRLNDEAGSG 60

Query: 61 EENGDDESDPPLKEEKGSRKPWPKNPVSKSPPPPF 96
          E +GDDESDPPLKEEKGSRKPWPKNPVSKSPPPPF
Sbjct: 61 EGSGDDESDPPLKEEKGSRKPWPKNPVSKSPPPPF 95

BLAST of PI0027322 vs. NCBI nr
Match: KAA0054914.1 (hypothetical protein E6C27_scaffold43052G00420 [Cucumis melo var. makuwa] >TYK22702.1 hypothetical protein E5676_scaffold1163G00190 [Cucumis melo var. makuwa])

HSP 1 Score: 156.0 bits (393), Expect = 1.6e-34
Identity = 82/95 (86.32%), Postives = 84/95 (88.42%), Query Frame = 0

Query: 1  MGCSTPSILILAIVVASIALRIPSETTARAIADPSPLSQPRFPIYNTLMKARLNDEAGSG 60
          MGCST +ILIL I VASIALR+PSETTARAIADP PLS P  PIYNTLMK RLNDEAGSG
Sbjct: 1  MGCSTANILILTIFVASIALRLPSETTARAIADPYPLSWPWLPIYNTLMKVRLNDEAGSG 60

Query: 61 EENGDDESDPPLKEEKGSRKPWPKNPVSKSPPPPF 96
          EENGDDESDPP KE K SRKPWPKNPVSKSPPPPF
Sbjct: 61 EENGDDESDPPSKEAKSSRKPWPKNPVSKSPPPPF 95

BLAST of PI0027322 vs. NCBI nr
Match: KAE8637368.1 (hypothetical protein CSA_004461, partial [Cucumis sativus])

HSP 1 Score: 137.1 bits (344), Expect = 7.8e-29
Identity = 71/86 (82.56%), Postives = 77/86 (89.53%), Query Frame = 0

Query: 1  MGCSTPSILILAIVVASIALRIPSETTARAIADPSPLSQPRFPIYNTLMKARLNDEAGSG 60
          MGCST +I+IL I VASIALR+P+ETTARAIADP PLS PR  IYNT+MK RLNDEAGSG
Sbjct: 1  MGCSTANIVILTIFVASIALRLPTETTARAIADPYPLSWPRLLIYNTVMKVRLNDEAGSG 60

Query: 61 EENGDDESDPPLKEEKGSRKPWPKNP 87
          E +GDDESDPPLKEEKGSRKPWPKNP
Sbjct: 61 EGSGDDESDPPLKEEKGSRKPWPKNP 86

BLAST of PI0027322 vs. NCBI nr
Match: KAE8646678.1 (hypothetical protein Csa_023589, partial [Cucumis sativus])

HSP 1 Score: 136.3 bits (342), Expect = 1.3e-28
Identity = 69/79 (87.34%), Postives = 73/79 (92.41%), Query Frame = 0

Query: 17 SIALRIPSETTARAIADPSPLSQPRFPIYNTLMKARLNDEAGSGEENGDDESDPPLKEEK 76
          SIALR+P+ETTARAIADP PLS PR  IYNT+MK RLNDEAGSGE +GDDESDPPLKEEK
Sbjct: 1  SIALRLPTETTARAIADPYPLSWPRLLIYNTVMKVRLNDEAGSGEGSGDDESDPPLKEEK 60

Query: 77 GSRKPWPKNPVSKSPPPPF 96
          GSRKPWPKNPVSKSPPPPF
Sbjct: 61 GSRKPWPKNPVSKSPPPPF 79

BLAST of PI0027322 vs. NCBI nr
Match: KAG6578899.1 (hypothetical protein SDJN03_23347, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 80.1 bits (196), Expect = 1.1e-11
Identity = 52/104 (50.00%), Postives = 66/104 (63.46%), Query Frame = 0

Query: 1   MGCSTPSILILAIVVASIALRIPSETTARAIADPSPLSQPRFP------IYNTLMKARLN 60
           MG ST ++ I+ I+VASIALR PS TTA A+  PSPL  P +        +   +K  L 
Sbjct: 1   MGYSTANLFIV-ILVASIALRPPSATTASAVVGPSPLPPPIYHSASGTLSFGRYIKISLE 60

Query: 61  DEAGSGEENGDDESDPP---LKEEKGSRKPWPKNPVSKSPPPPF 96
            +AG   ENG+DES+PP    K  +G R+PWPK PV+KSPPPPF
Sbjct: 61  GKAGPVVENGEDESEPPPPSSKVRRGPRRPWPKKPVAKSPPPPF 103

BLAST of PI0027322 vs. NCBI nr
Match: KAG6578898.1 (hypothetical protein SDJN03_23346, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 66.6 bits (161), Expect = 1.3e-07
Identity = 47/102 (46.08%), Postives = 62/102 (60.78%), Query Frame = 0

Query: 1  MGCSTPSILILAIVVASIALRIPSETTARAIADPSPLSQPRFP------IYNTLMKARLN 60
          MG ST + L+  I+VASIALR+P E  A A+  PSPL  P         ++   +K  L 
Sbjct: 1  MGYSTAN-LMFGILVASIALRLPLEARASAMVGPSPLPPPTCHSPSGQLLFRRPIKVSLT 60

Query: 61 DEAGSGEENGDDESD-PPLKEEKGSRKPWPKNPVSKSPPPPF 96
           +A     +G+DE++ P  K+EKG RKPWPK PV K+PPPPF
Sbjct: 61 VKA-----SGEDEAEAPSSKDEKGRRKPWPKQPVPKAPPPPF 96

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5A7UIB87.9e-3586.32Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A0A0K9K23.0e-3484.21Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G058720 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
KAA0054914.11.6e-3486.32hypothetical protein E6C27_scaffold43052G00420 [Cucumis melo var. makuwa] >TYK22... [more]
KAE8637368.17.8e-2982.56hypothetical protein CSA_004461, partial [Cucumis sativus][more]
KAE8646678.11.3e-2887.34hypothetical protein Csa_023589, partial [Cucumis sativus][more]
KAG6578899.11.1e-1150.00hypothetical protein SDJN03_23347, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAG6578898.11.3e-0746.08hypothetical protein SDJN03_23346, partial [Cucurbita argyrosperma subsp. sorori... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 53..95

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
PI0027322.1PI0027322.1mRNA