PI0027225 (gene) Melon (PI 482460) v1

Overview


Name	PI0027225
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	serine-rich protein-related
Location	chr01: 26964231 .. 26964925 (+)
RNA-Seq Expression	PI0027225
Synteny	PI0027225

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAATATTTGCATAAATAAAAACGCCGAAAAGCGAAGTCAGTCAATTCTCACATGCAAATGTAAAAGTTAGAACTTCCCAGTTCCAATGCCGAACAAAACCGCTTCCTCTTCCTCTTCCCGCCTCTGCCTCTGTGCTCCGACCACCCATCCCGGCTCTTTCCGCTGCAGCCTCCACCGCCGCCCGTCGAATTCCTCCGACAAAACGCCGCTTCCTCCTCGTGGAAGCCAATCGAAGGCGGCAACGACGACGGATCATCATCTCCTTAAGGCGTTTCTGATGCAGATCGTAAAGCCGTCGAGTCATGATCTTCAAAGACGGAGAAATTTCCAGCCTAAACCTTCTCGATTCTGCAATGTTGTTGCCGCTTCGGATCATCGTTTGGCTGTTTCTTGATCGTGAATCGCGTACGTATACATACATATGTGATTGACGATTTGTAACTCTTTATCGATCATTTCTGTTTTTGCGGATGGAATTTAGTGTGTGTTGTGTACAGGGGAAAGTGAAATTGGAAACGTGATTAAGCGTTTCTGATCTTTGTTTTGAGATTAATTTATGGAATTGTTAGGGCATTTGAACTGAAATTGGTGTAATTTGTATATAATTGGCGGATTAGTAGACTGATGTTGTAAATAGTGAGAGAACTACAACTTTTATGAAACATAAAAATAGTTTCGAATATTGGAGAAGAAAT

mRNA sequence

AAATATTTGCATAAATAAAAACGCCGAAAAGCGAAGTCAGTCAATTCTCACATGCAAATGTAAAAGTTAGAACTTCCCAGTTCCAATGCCGAACAAAACCGCTTCCTCTTCCTCTTCCCGCCTCTGCCTCTGTGCTCCGACCACCCATCCCGGCTCTTTCCGCTGCAGCCTCCACCGCCGCCCGTCGAATTCCTCCGACAAAACGCCGCTTCCTCCTCGTGGAAGCCAATCGAAGGCGGCAACGACGACGGATCATCATCTCCTTAAGGCGTTTCTGATGCAGATCGTAAAGCCGTCGAGTCATGATCTTCAAAGACGGAGAAATTTCCAGCCTAAACCTTCTCGATTCTGCAATGTTGTTGCCGCTTCGGATCATCGTTTGGCTGTTTCTTGATCGTGAATCGCGTACGTATACATACATATGTGATTGACGATTTGTAACTCTTTATCGATCATTTCTGTTTTTGCGGATGGAATTTAGTGTGTGTTGTGTACAGGGGAAAGTGAAATTGGAAACGTGATTAAGCGTTTCTGATCTTTGTTTTGAGATTAATTTATGGAATTGTTAGGGCATTTGAACTGAAATTGGTGTAATTTGTATATAATTGGCGGATTAGTAGACTGATGTTGTAAATAGTGAGAGAACTACAACTTTTATGAAACATAAAAATAGTTTCGAATATTGGAGAAGAAAT

Coding sequence (CDS)

ATGCCGAACAAAACCGCTTCCTCTTCCTCTTCCCGCCTCTGCCTCTGTGCTCCGACCACCCATCCCGGCTCTTTCCGCTGCAGCCTCCACCGCCGCCCGTCGAATTCCTCCGACAAAACGCCGCTTCCTCCTCGTGGAAGCCAATCGAAGGCGGCAACGACGACGGATCATCATCTCCTTAAGGCGTTTCTGATGCAGATCGTAAAGCCGTCGAGTCATGATCTTCAAAGACGGAGAAATTTCCAGCCTAAACCTTCTCGATTCTGCAATGTTGTTGCCGCTTCGGATCATCGTTTGGCTGTTTCTTGA

Protein sequence

MPNKTASSSSSRLCLCAPTTHPGSFRCSLHRRPSNSSDKTPLPPRGSQSKAATTTDHHLLKAFLMQIVKPSSHDLQRRRNFQPKPSRFCNVVAASDHRLAVS

Homology

[Close]

BLAST of PI0027225 vs. ExPASy TrEMBL
Match: A0A1S3CEH6 (uncharacterized protein LOC103499822 OS=Cucumis melo OX=3656 GN=LOC103499822 PE=4 SV=1)

HSP 1 Score: 166.8 bits (421), Expect = 4.8e-38
Identity = 89/106 (83.96%), Postives = 92/106 (86.79%), Query Frame = 0


Query: 1   MPNKTASSSSSRLCLCAPTTHPGSFRCSLHRRPSNSSDKTPL---PPRGSQSKAA-TTTD 60
           MPNKTA  SSSRLCLCAPTTHPGSFRCSLHRRPSNSS KTP    PP GSQSKAA TTTD
Sbjct: 1   MPNKTA--SSSRLCLCAPTTHPGSFRCSLHRRPSNSSHKTPQPLPPPHGSQSKAATTTTD 60

Query: 61  HHLLKAFLMQIVKPSSHDLQRRRNFQPKPSRFCNVVAASDHRLAVS 103
           H+ LKAFLMQIVKPSSH LQRR NFQPKPSRFCN+V+A D RLAVS
Sbjct: 61  HYFLKAFLMQIVKPSSHGLQRRGNFQPKPSRFCNIVSAPDPRLAVS 104

[Close]

BLAST of PI0027225 vs. ExPASy TrEMBL
Match: A0A0A0K698 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G432210 PE=4 SV=1)

HSP 1 Score: 166.4 bits (420), Expect = 6.3e-38
Identity = 92/107 (85.98%), Postives = 96/107 (89.72%), Query Frame = 0


Query: 1   MPNKTASSSSSRLCLCAPTTHPGSFRCSLHRRPSNSSDKT-PLP---PRGSQSK-AATTT 60
           MPNKTA  SSSRLCLCAPTTHPGSFRCSLHRR SNSS KT PLP   PRGSQSK AATTT
Sbjct: 1   MPNKTA--SSSRLCLCAPTTHPGSFRCSLHRRLSNSSHKTPPLPPPSPRGSQSKAAATTT 60

Query: 61  DHHLLKAFLMQIVKPSSHDLQRRRNFQPKPSRFCNVVAASDHRLAVS 103
           DHHLLKAFLMQIVKPSSHDLQRR +F+PKPSRFC+VV+ASD RLAVS
Sbjct: 61  DHHLLKAFLMQIVKPSSHDLQRRGSFEPKPSRFCSVVSASDPRLAVS 105

[Close]

BLAST of PI0027225 vs. ExPASy TrEMBL
Match: A0A5A7UZ19 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold339G002010 PE=4 SV=1)

HSP 1 Score: 163.7 bits (413), Expect = 4.1e-37
Identity = 88/106 (83.02%), Postives = 91/106 (85.85%), Query Frame = 0


Query: 1   MPNKTASSSSSRLCLCAPTTHPGSFRCSLHRRPSNSSDKTPL---PPRGSQSKAA-TTTD 60
           M NKTA  SSSRLCLCAPTTHPGSFRCSLHRRPSNSS KTP    PP GSQSKAA TTTD
Sbjct: 1   MANKTA--SSSRLCLCAPTTHPGSFRCSLHRRPSNSSHKTPQPLPPPHGSQSKAATTTTD 60

Query: 61  HHLLKAFLMQIVKPSSHDLQRRRNFQPKPSRFCNVVAASDHRLAVS 103
           H+ LKAFLMQIVKPSSH LQRR NFQPKPSRFCN+V+A D RLAVS
Sbjct: 61  HYFLKAFLMQIVKPSSHGLQRRGNFQPKPSRFCNIVSAPDPRLAVS 104

[Close]

BLAST of PI0027225 vs. ExPASy TrEMBL
Match: A0A6J1DD51 (uncharacterized protein LOC111019381 OS=Momordica charantia OX=3673 GN=LOC111019381 PE=4 SV=1)

HSP 1 Score: 120.6 bits (301), Expect = 3.9e-24
Identity = 64/93 (68.82%), Postives = 71/93 (76.34%), Query Frame = 0


Query: 1  MPNKTA--SSSSSRLCLCAPTTHPGSFRCSLHRRPSNSSDKTPLPPRGSQSKAATTTDHH 60
          M  KTA  S+S+SRLCLCAPTTHPGSFRCSLHRRP  +SDK+      + S         
Sbjct: 1  MATKTAPSSASASRLCLCAPTTHPGSFRCSLHRRPRKASDKS---KAAAASGGVDWNKTD 60

Query: 61 LLKAFLMQIVKPSSHDLQRRRNFQPKPSRFCNV 92
          L+KAFLMQI+KPSSHDLQRRRNFQPKPSRFCNV
Sbjct: 61 LVKAFLMQIIKPSSHDLQRRRNFQPKPSRFCNV 90

[Close]

BLAST of PI0027225 vs. ExPASy TrEMBL
Match: A0A6A1UNQ3 (Uncharacterized protein OS=Morella rubra OX=262757 GN=CJ030_MR0G003787 PE=4 SV=1)

HSP 1 Score: 105.1 bits (261), Expect = 1.7e-19
Identity = 58/104 (55.77%), Postives = 71/104 (68.27%), Query Frame = 0


Query: 2   PNKTASSSSSRLCLCAPTTHPGSFRCSLHR--RPSNSSDKTPLPPRGSQSKAATTTDHHL 61
           P    S +++R CLCAPTTHPGSFRCS+HR  RP     +  +    SQ + A  T  + 
Sbjct: 8   PPHPKSQATTRTCLCAPTTHPGSFRCSIHRNSRPHKVFTRPTVRLSSSQWELAAITKVNS 67

Query: 62  LKAFLMQIVKPSSHDLQRRRNFQPKPSRFCNVVAAS-DHRLAVS 103
           L+AFL+ I+KPSSHDLQRRRNFQPKPSRFC +   S DH +AVS
Sbjct: 68  LRAFLLHIIKPSSHDLQRRRNFQPKPSRFCVMNNNSHDHGVAVS 111

[Close]

BLAST of PI0027225 vs. NCBI nr
Match: XP_008461151.1 (PREDICTED: uncharacterized protein LOC103499822 [Cucumis melo])

HSP 1 Score: 166.8 bits (421), Expect = 9.9e-38
Identity = 89/106 (83.96%), Postives = 92/106 (86.79%), Query Frame = 0


Query: 1   MPNKTASSSSSRLCLCAPTTHPGSFRCSLHRRPSNSSDKTPL---PPRGSQSKAA-TTTD 60
           MPNKTA  SSSRLCLCAPTTHPGSFRCSLHRRPSNSS KTP    PP GSQSKAA TTTD
Sbjct: 1   MPNKTA--SSSRLCLCAPTTHPGSFRCSLHRRPSNSSHKTPQPLPPPHGSQSKAATTTTD 60

Query: 61  HHLLKAFLMQIVKPSSHDLQRRRNFQPKPSRFCNVVAASDHRLAVS 103
           H+ LKAFLMQIVKPSSH LQRR NFQPKPSRFCN+V+A D RLAVS
Sbjct: 61  HYFLKAFLMQIVKPSSHGLQRRGNFQPKPSRFCNIVSAPDPRLAVS 104

[Close]

BLAST of PI0027225 vs. NCBI nr
Match: KGN45240.1 (hypothetical protein Csa_016736 [Cucumis sativus])

HSP 1 Score: 166.4 bits (420), Expect = 1.3e-37
Identity = 92/107 (85.98%), Postives = 96/107 (89.72%), Query Frame = 0


Query: 1   MPNKTASSSSSRLCLCAPTTHPGSFRCSLHRRPSNSSDKT-PLP---PRGSQSK-AATTT 60
           MPNKTA  SSSRLCLCAPTTHPGSFRCSLHRR SNSS KT PLP   PRGSQSK AATTT
Sbjct: 1   MPNKTA--SSSRLCLCAPTTHPGSFRCSLHRRLSNSSHKTPPLPPPSPRGSQSKAAATTT 60

Query: 61  DHHLLKAFLMQIVKPSSHDLQRRRNFQPKPSRFCNVVAASDHRLAVS 103
           DHHLLKAFLMQIVKPSSHDLQRR +F+PKPSRFC+VV+ASD RLAVS
Sbjct: 61  DHHLLKAFLMQIVKPSSHDLQRRGSFEPKPSRFCSVVSASDPRLAVS 105

[Close]

BLAST of PI0027225 vs. NCBI nr
Match: KAA0058731.1 (uncharacterized protein E6C27_scaffold339G002010 [Cucumis melo var. makuwa])

HSP 1 Score: 163.7 bits (413), Expect = 8.4e-37
Identity = 88/106 (83.02%), Postives = 91/106 (85.85%), Query Frame = 0


Query: 1   MPNKTASSSSSRLCLCAPTTHPGSFRCSLHRRPSNSSDKTPL---PPRGSQSKAA-TTTD 60
           M NKTA  SSSRLCLCAPTTHPGSFRCSLHRRPSNSS KTP    PP GSQSKAA TTTD
Sbjct: 1   MANKTA--SSSRLCLCAPTTHPGSFRCSLHRRPSNSSHKTPQPLPPPHGSQSKAATTTTD 60

Query: 61  HHLLKAFLMQIVKPSSHDLQRRRNFQPKPSRFCNVVAASDHRLAVS 103
           H+ LKAFLMQIVKPSSH LQRR NFQPKPSRFCN+V+A D RLAVS
Sbjct: 61  HYFLKAFLMQIVKPSSHGLQRRGNFQPKPSRFCNIVSAPDPRLAVS 104

[Close]

BLAST of PI0027225 vs. NCBI nr
Match: KAG6593379.1 (hypothetical protein SDJN03_12855, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 138.7 bits (348), Expect = 2.9e-29
Identity = 77/103 (74.76%), Postives = 85/103 (82.52%), Query Frame = 0


Query: 1   MPNKTASSSSSRLCLCAPTTHPGSFRCSLHRRPSNSSDK-TPLPPRGSQSKAATTTDHHL 60
           M NKTA  SS RLCLCAPTTHPGSFRCSLHRR   +S+K  PLPP G+QSKA + TD  L
Sbjct: 1   MANKTA-PSSRRLCLCAPTTHPGSFRCSLHRRMRKASNKMPPLPPPGNQSKAVSATD--L 60

Query: 61  LKAFLMQIVKPSSHDLQRRRNFQPKPSRFCNVVAASDHRLAVS 103
           +KAFLMQ++KPSS DLQRRRNFQPKPSRFCN  AASD+ LAVS
Sbjct: 61  VKAFLMQVIKPSSQDLQRRRNFQPKPSRFCN--AASDYGLAVS 98

[Close]

BLAST of PI0027225 vs. NCBI nr
Match: KAG7014157.1 (hypothetical protein SDJN02_24331, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 137.9 bits (346), Expect = 4.9e-29
Identity = 80/104 (76.92%), Postives = 83/104 (79.81%), Query Frame = 0


Query: 1   MPNKTASSSSSRLCLCAPTTHPGSFRCSLHRRPSNSSDKTPLPPRGSQSKAATTTD--HH 60
           M NKTA  SSSRLCLCAPT+HPGSFRCSLHRRP  +SDKT L  RGSQSKAAT T     
Sbjct: 104 MANKTA--SSSRLCLCAPTSHPGSFRCSLHRRPRKASDKTTL-SRGSQSKAATATSTATG 163

Query: 61  LLKAFLMQIVKPSSHDLQRRRNFQPKPSRFCNVVAASDHRLAVS 103
           L K FLMQ +KPSSHDL RRRNFQPKPSRFCN  AASDHRL VS
Sbjct: 164 LFKVFLMQAIKPSSHDL-RRRNFQPKPSRFCN--AASDHRLEVS 201

[Close]

BLAST of PI0027225 vs. TAIR 10
Match: AT5G11090.1 (serine-rich protein-related )

HSP 1 Score: 64.7 bits (156), Expect = 4.9e-11
Identity = 37/105 (35.24%), Postives = 57/105 (54.29%), Query Frame = 0


Query: 11  SRLCLCAPTTHPGSFRCSLHRRPSNSSDKTPLPPRGSQSKAATTTDHHL----------- 70
           SR C+C+PTTHPGSFRCSLH+  +N        P G  + + TT   ++           
Sbjct: 120 SRRCMCSPTTHPGSFRCSLHKNVAN--------PHGQGTASYTTNGLNMRRSAMTNSLVR 179

Query: 71  --------LKAFLMQIVKPSSHDLQRRRNFQPKPSRFCNVVAASD 97
                   ++  L  +++PSSH L+RR  +QP+PSR  +++A +D
Sbjct: 180 IGGVEGEWVRRALTTLIRPSSHHLKRRAAYQPRPSRL-SIMAKAD 215

[Close]

BLAST of PI0027225 vs. TAIR 10
Match: AT5G25280.1 (serine-rich protein-related )

HSP 1 Score: 62.4 bits (150), Expect = 2.4e-10
Identity = 35/106 (33.02%), Postives = 54/106 (50.94%), Query Frame = 0


Query: 10  SSRLCLCAPTTHPGSFRCSLHRRPSNSSDKTPLPPRGSQSKAATTTDHHL---------- 69
           S R C+C+PTTHPGSFRCSLH+  +N        P G  + + TT   ++          
Sbjct: 122 SRRRCMCSPTTHPGSFRCSLHKNVAN--------PHGQGTASYTTNGLNMRRSAMTNSLV 181

Query: 70  ---------LKAFLMQIVKPSSHDLQRRRNFQPKPSRFCNVVAASD 97
                    ++  L  +++PSSH L+RR  ++P+ SR  ++  A D
Sbjct: 182 RIGGVEGEWVRRALTTLIRPSSHQLKRRSAYEPRRSRLASMSKAED 219

[Close]

BLAST of PI0027225 vs. TAIR 10
Match: AT5G25280.2 (serine-rich protein-related )

HSP 1 Score: 62.4 bits (150), Expect = 2.4e-10
Identity = 35/106 (33.02%), Postives = 54/106 (50.94%), Query Frame = 0


Query: 10  SSRLCLCAPTTHPGSFRCSLHRRPSNSSDKTPLPPRGSQSKAATTTDHHL---------- 69
           S R C+C+PTTHPGSFRCSLH+  +N        P G  + + TT   ++          
Sbjct: 122 SRRRCMCSPTTHPGSFRCSLHKNVAN--------PHGQGTASYTTNGLNMRRSAMTNSLV 181

Query: 70  ---------LKAFLMQIVKPSSHDLQRRRNFQPKPSRFCNVVAASD 97
                    ++  L  +++PSSH L+RR  ++P+ SR  ++  A D
Sbjct: 182 RIGGVEGEWVRRALTTLIRPSSHQLKRRSAYEPRRSRLASMSKAED 219

[Close]

BLAST of PI0027225 vs. TAIR 10
Match: AT5G20370.1 (serine-rich protein-related )

HSP 1 Score: 53.1 bits (126), Expect = 1.5e-07
Identity = 34/109 (31.19%), Postives = 47/109 (43.12%), Query Frame = 0


Query: 5   TASSSSSRLCLCAPTTHPGSFRCSLHRRPSNSSDKT------------------------ 64
           +++  + R CLC+PTTHPGSFRCS HRR  +   KT                        
Sbjct: 62  SSNHQTKRKCLCSPTTHPGSFRCSFHRRLEHEKSKTLASSTVKRNNRGDNTIRVNVGLNL 121

Query: 65  -PLPPRGSQSKAATTTDHHLLKAFLMQIVKPSSHDLQRRRNFQPKPSRF 89
             L    S +K  +       ++    + KPSS    RR  F+P+ SRF
Sbjct: 122 RKLALMNSLAKIGSVEAERFRRSLAANLAKPSSLHSHRRPEFRPRLSRF 170

[Close]

BLAST of PI0027225 vs. TAIR 10
Match: AT1G24577.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G67910.2); Has 115 Blast hits to 115 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 115; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 45.1 bits (105), Expect = 4.0e-05
Identity = 18/34 (52.94%), Postives = 26/34 (76.47%), Query Frame = 0


Query: 7  SSSSSRLCLCAPTTHPGSFRCSLHRRPSNSSDKT 41
          +S +  +C+C+PTTHPGSF+C LHR PS   +K+
Sbjct: 25 TSITKTICICSPTTHPGSFKCKLHRTPSLQRNKS 58

The following BLAST results are available for this feature:

BLAST of PI0027225 vs.


Match Name	E-value	Identity	Description

BLAST of PI0027225 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CEH6	4.8e-38	83.96	uncharacterized protein LOC103499822 OS=Cucumis melo OX=3656 GN=LOC103499822 PE=...	[more]
A0A0A0K698	6.3e-38	85.98	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G432210 PE=4 SV=1	[more]
A0A5A7UZ19	4.1e-37	83.02	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A6J1DD51	3.9e-24	68.82	uncharacterized protein LOC111019381 OS=Momordica charantia OX=3673 GN=LOC111019...	[more]
A0A6A1UNQ3	1.7e-19	55.77	Uncharacterized protein OS=Morella rubra OX=262757 GN=CJ030_MR0G003787 PE=4 SV=1	[more]

BLAST of PI0027225 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008461151.1	9.9e-38	83.96	PREDICTED: uncharacterized protein LOC103499822 [Cucumis melo]	[more]
KGN45240.1	1.3e-37	85.98	hypothetical protein Csa_016736 [Cucumis sativus]	[more]
KAA0058731.1	8.4e-37	83.02	uncharacterized protein E6C27_scaffold339G002010 [Cucumis melo var. makuwa]	[more]
KAG6593379.1	2.9e-29	74.76	hypothetical protein SDJN03_12855, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAG7014157.1	4.9e-29	76.92	hypothetical protein SDJN02_24331, partial [Cucurbita argyrosperma subsp. argyro...	[more]

BLAST of PI0027225 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G11090.1	4.9e-11	35.24	serine-rich protein-related	[more]
AT5G25280.1	2.4e-10	33.02	serine-rich protein-related	[more]
AT5G25280.2	2.4e-10	33.02	serine-rich protein-related	[more]
AT5G20370.1	1.5e-07	31.19	serine-rich protein-related	[more]
AT1G24577.1	4.0e-05	52.94	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 21..55
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 29..55
None	No IPR available	PANTHER	PTHR33132:SF63	SUBFAMILY NOT NAMED	coord: 1..96
None	No IPR available	PANTHER	PTHR33132	OSJNBB0118P14.9 PROTEIN	coord: 1..96

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0027225.1	PI0027225.1	mRNA